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ORCID12th eScience 2016: Baltimore, MD, USA
- 12th IEEE International Conference on e-Science, e-Science 2016, Baltimore, MD, USA, October 23-27, 2016. IEEE Computer Society 2016, ISBN 978-1-5090-4273-9
Paper Session 1: Cloud Computing
- Andrew S. Grimshaw, Md Anindya Prodhan, Alexander Thomas, Craig A. Stewart, Richard Knepper
:
Campus Compute Co-operative (CCC): A service oriented cloud federation. 1-10 - Iman Sadooghi, Geet Kumar, Ke Wang, Dongfang Zhao, Tonglin Li, Ioan Raicu:
Albatross: An efficient cloud-enabled task scheduling and execution framework using distributed message queues. 11-20 - Hugo Hiden, Simon Woodman, Paul Watson:
Prediction of workflow execution time using provenance traces: Practical applications in medical data processing. 21-30
Paper Session 2: Curation
- Robert E. Schuler, Carl Kesselman, Karl Czajkowski:
Accelerating data-driven discovery with scientific asset management. 31-40 - Icaro Alzuru, Andréa M. Matsunaga, Maurício O. Tsugawa, José A. B. Fortes:
Cooperative human-machine data extraction from biological collections. 41-50 - Fagner Leal Pantoja, Patrícia Cavoto, Júlio Cesar dos Reis, Andre SantSache:
Generating knowledge networks from phenotypic descriptions. 51-60
Paper Session 3: Reproducibility
- Peter Ivie, Douglas Thain:
PRUNE: A preserving run environment for reproducible scientific computing. 61-70 - Lucas Augusto Montalvão Costa Carvalho, Khalid Belhajjame, Claudia Bauzer Medeiros:
Converting scripts into reproducible workflow research objects. 71-80 - Rawaa Qasha, Jacek Cala, Paul Watson:
A framework for scientific workflow reproducibility in the cloud. 81-90 - Haiyan Meng, Douglas Thain, Alexander Vyushkov, Matthias Wolf, Anna Woodard:
Conducting reproducible research with Umbrella: Tracking, creating, and preserving execution environments. 91-100
Paper Session 4: Algorithms
- Li Jiang, Hideyuki Kawashima, Osamu Tatebe:
Fast window aggregate on array database by recursive incremental computation. 101-110 - José Manuel Moreira, Paulo Dias, Pedro Amaral:
Representation of continuously changing data over time and space: Modeling the shape of spatiotemporal phenomena. 111-119 - Carlos Gonçalves, Joaquim F. Silva, José C. Cunha:
An n-gram cache for large-scale parallel extraction of multiword relevant expressions with LocalMaxs. 120-129 - Nicholas Carey, Tamas Budavari, Yanif Ahmad, Alexander S. Szalay:
DOT-K: A distributed online top-K elements algorithm using extreme value statistics. 130-136
Paper Session 5: Workflow
- Vahid Arabnejad, Kris Bubendorfer, Bryan Ng:
Budget distribution strategies for scientific workflow scheduling in commercial clouds. 137-146 - Philip Eichinski, Paul Roe:
Datatrack: An R package for managing data in a multi-stage experimental workflow data versioning and provenance considerations in interactive scripting. 147-154 - Wladislaw Gusew, Björn Scheuermann:
Starting workflow tasks before they're ready. 155-164
Paper Session 6: Potpourri and Science of Science
- Yan Zhao, Edgar F. Black, Luigi Marini, Kenton McHenry, Norma Kenyon, Rachana Patil, André Alexander Kajdacsy-Balla, Amelia Bartholomew:
Automatic glomerulus extraction in whole slide images towards computer aided diagnosis. 165-174 - Subha Vasudevan, William Pfeffer, Delmar B. Davis, Hazeline U. Asuncion:
Improving data provenance reconstruction via a multi-level funneling approach. 175-184 - David De Roure, Graham Klyne, Kevin R. Page, John Pybus, David M. Weigl, Matthew Wilcoxson, Pip Willcox:
Plans and performances: Parallels in the production of science and music. 185-192
Paper Session 7: New Platforms
- Jik-Soo Kim, Cao Ngoc Nguyen, Soonwook Hwang:
MOHA: Many-task computing meets the big data platform. 193-202 - Steven Tuecke, Rachana Ananthakrishnan, Kyle Chard, Mattias Lidman, Brendan McCollam, Stephen Rosen, Ian T. Foster:
Globus auth: A research identity and access management platform. 203-212 - E. Wes Bethel, Martin Greenwald, Kerstin Kleese van Dam, Manish Parashar, Stefan M. Wild, H. Steven Wiley:
Management, analysis, and visualization of experimental and observational data - The convergence of data and computing. 213-222 - Marshall Mattingly, Andrew Barnas, Susan Ellis-Felege, Robert Newman, David Iles, Travis J. Desell:
Developing a citizen science web portal for manual and automated ecological image detection. 223-232
Paper Session 8: Machine Learning Applications
- Markus Mauder, Eirini Ntoutsi, Peer Kröger, Christoph Mayr, Gisela Grupe, Anita Toncala, Stefan Holzl:
Applying data mining methods for the analysis of stable isotope data in bioarchaeology. 233-242 - Evelyn Perez Cervantes, Cesar Henrique Comin, Roberto Marcondes Cesar Jr., Luciano da Fontoura Costa:
Data-oriented neuron classification from their parts. 243-250 - Connor Bowley, Alicia Andes, Susan Ellis-Felege, Travis Desell:
Detecting wildlife in uncontrolled outdoor video using convolutional neural networks. 251-259 - AbdElRahman A. ElSaid, Brandon Wild, James Higgins, Travis Desell:
Using LSTM recurrent neural networks to predict excess vibration events in aircraft engines. 260-269
Invited Short Papers: Hot Topics 1
- Amani Abu Jabal, Elisa Bertino:
SimP: Secure interoperable multi-granular provenance framework. 270-275 - Amir Sinaeepourfard, Jordi Garcia, Xavier Masip-Bruin, Eva Marín-Tordera:
A comprehensive scenario agnostic Data LifeCycle model for an efficient data complexity management. 276-281 - Zeqian Meng, John M. Brooke, Rizos Sakellariou:
Semantic accountable matchmaking for e-Science resource sharing. 282-286 - Supun Nakandala, Hasini Gunasinghe, Suresh Marru, Marlon E. Pierce:
Apache Airavata security manager: Authentication and authorization implementations for a multi-tenant escience framework. 287-292
Paper Session 9: Social Analytics and Population Simulation
- Shuo Wang, Richard O. Sinnott, Surya Nepal:
Privacy-protected social media user trajectories calibration. 293-302 - Nan Wang, Blesson Varghese, Peter D. Donnelly:
A machine learning analysis of Twitter sentiment to the Sandy Hook shootings. 303-312 - Peng Chen, Tom Evans, Michael Frisby, Eduardo Izquierdo, Beth Plale:
A hybrid approach to population construction for agricultural agent-based simulation. 313-322 - Andreas Karlsson, Niten Olofsson, Erwin Laure, Mark Clements:
A parallel microsimulation package for modelling cancer screening policies. 323-330
Invited Short Papers: Hot Topics 2
- Yolanda Gil, Daniel Garijo, Saurabh Mishra, Varun Ratnakar:
OntoSoft: A distributed semantic registry for scientific software. 331-336 - Yadu N. Babuji, Kyle Chard, Aaron Gerow, Eamon Duede:
A secure data enclave and analytics platform for social scientists. 337-342 - Ricky J. Sethi, Yolanda Gil:
Reproducibility in computer vision: Towards open publication of image analysis experiments as semantic workflows. 343-348 - Isuru Suriarachchi, Beth Plale:
Crossing analytics systems: A case for integrated provenance in data lakes. 349-354 - Xiang Li, Xiaoyang Xu, Tanu Malik:
Interactive provenance summaries for reproducible science. 355-360
Paper Session 10: High-Performance Computing
- Vivekanandan Balasubramanian, Iain Bethune, Ardita Shkurti, Elena Breitmoser, Eugen Hruska, Cecilia Clementi, Charles A. Laughton, Shantenu Jha:
ExTASY: Scalable and flexible coupling of MD simulations and advanced sampling techniques. 361-370 - Anthony Kougkas, Matthieu Dorier, Robert Latham, Robert B. Ross, Xian-He Sun:
Leveraging burst buffer coordination to prevent I/O interference. 371-380 - Renske Gelderloos, Alexander S. Szalay, Thomas W. N. Haine, Gerard Lemson:
A fast algorithm for neutrally-buoyant Lagrangian particles in numerical ocean modeling. 381-388 - You-Wei Cheah, Joshua Boverhof, Abdelrahman Elbashandy, Deborah A. Agarwal, James Leek, Thomas Epperly, John C. Eslick, David C. Miller:
Data management and simulation support accelerating carbon capture through computing. 389-398
ECW 2016 - Environmental Computing Workshop
Session 1: Tools and Platforms
- F. Inti Pelupessy, Ben van Werkhoven, Arjen van Elteren, Jan Viebahn, Adam Candy, Simon Portegies Zwart, Henk A. Dijkstra:
OMUSE: Oceanographic multipurpose software environment. 399 - Rafael Ferreira da Silva, Ewa Deelman, Rosa Filgueira, Karan Vahi, Mats Rynge, Rajiv Mayani, Benjamin Mayer:
Automating environmental computing applications with scientific workflows. 400-406 - Peter Uhe, Friederike E. L. Otto, Md. Mamunur Rashid, David C. H. Wallom:
Utilising Amazon web services to provide an on demand urgent computing facility for climateprediction.net. 407-413
Session 2: Data
- Nicolas Chiaraviglio, Tomàs Artés, Roberto Bocca, Jorge Lopez Pérez, A. Gentile, Jesús San-Miguel-Ayanz, Ana Cortés, Tomàs Margalef:
Automatic fire perimeter determination using MODIS hotspots information. 414-423 - Romulo Goncalves, Sisi Zlatanova, Kostis Kyzirakos, Pirouz Nourian, Foteini Alvanaki, Willem Robert van Hage:
A columnar architecture for modern risk management systems. 424-429 - Niels Drost, Rolf Hut, Maarten A. J. van Meersbergen, Edwin H. Sutanudjaja, Marc F. P. Bierkens, Nick van de Giesen:
The eWaterCycle project. 430 - Quillon K. Harpham:
The IQmulus high volume fusion and analysis platform for Geospatial Point Clouds, featuring a marine bathymetry use case. 431
Session 3: Case Studies
- Viera Sipková, Ladislav Hluchý, Miroslav Dobrucký, Juraj Bartok, Binh Minh Nguyen:
Manufacturing of weather forecasting simulations on high performance infrastructures. 432-439 - Harold Yih-Chi Tan:
The climate change for flood and debris mitigation after typhoon Morakot 2009 in Taiwan. 440 - Minh Thanh Chung, Manh-Thin Nguyen, Nhu-Y. Nguyen-Huynh, Nguyen Thong, Nam Thoai:
Performance evaluation of environmental applications using TELEMAC-MASCARET on virtual platforms. 441-448 - Matti Heikkurinen, Dieter Kranzlmüller:
Environmental computing - Applications, tools and data solutions. 449
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