BibTeX records: Jasmijn A. Baaijens

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@article{DBLP:journals/bmcbi/BemmelenSB24,
  author       = {Jasper van Bemmelen and
                  Davida S. Smyth and
                  Jasmijn A. Baaijens},
  title        = {Amplidiff: an optimized amplicon sequencing approach to estimating
                  lineage abundances in viral metagenomes},
  journal      = {{BMC} Bioinform.},
  volume       = {25},
  number       = {1},
  pages        = {126},
  year         = {2024},
  url          = {https://doi.org/10.1186/s12859-024-05735-4},
  doi          = {10.1186/S12859-024-05735-4},
  timestamp    = {Tue, 02 Apr 2024 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/BemmelenSB24.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/nc/BaaijensBBVPRS22,
  author       = {Jasmijn A. Baaijens and
                  Paola Bonizzoni and
                  Christina Boucher and
                  Gianluca Della Vedova and
                  Yuri Pirola and
                  Raffaella Rizzi and
                  Jouni Sir{\'{e}}n},
  title        = {Computational graph pangenomics: a tutorial on data structures and
                  their applications},
  journal      = {Nat. Comput.},
  volume       = {21},
  number       = {1},
  pages        = {81--108},
  year         = {2022},
  url          = {https://doi.org/10.1007/s11047-022-09882-6},
  doi          = {10.1007/S11047-022-09882-6},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nc/BaaijensBBVPRS22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@inproceedings{DBLP:conf/recomb/BaaijensSS20,
  author       = {Jasmijn A. Baaijens and
                  Leen Stougie and
                  Alexander Sch{\"{o}}nhuth},
  editor       = {Russell Schwartz},
  title        = {Strain-Aware Assembly of Genomes from Mixed Samples Using Flow Variation
                  Graphs},
  booktitle    = {Research in Computational Molecular Biology - 24th Annual International
                  Conference, {RECOMB} 2020, Padua, Italy, May 10-13, 2020, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {12074},
  pages        = {221--222},
  publisher    = {Springer},
  year         = {2020},
  url          = {https://doi.org/10.1007/978-3-030-45257-5\_14},
  doi          = {10.1007/978-3-030-45257-5\_14},
  timestamp    = {Tue, 21 Apr 2020 12:14:30 +0200},
  biburl       = {https://dblp.org/rec/conf/recomb/BaaijensSS20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/BaaijensS19,
  author       = {Jasmijn A. Baaijens and
                  Alexander Sch{\"{o}}nhuth},
  title        = {Overlap graph-based generation of haplotigs for diploids and polyploids},
  journal      = {Bioinform.},
  volume       = {35},
  number       = {21},
  pages        = {4281--4289},
  year         = {2019},
  url          = {https://doi.org/10.1093/bioinformatics/btz255},
  doi          = {10.1093/BIOINFORMATICS/BTZ255},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/BaaijensS19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/BaaijensRKSS19,
  author       = {Jasmijn A. Baaijens and
                  Bastiaan Van der Roest and
                  Johannes K{\"{o}}ster and
                  Leen Stougie and
                  Alexander Sch{\"{o}}nhuth},
  title        = {Full-length de novo viral quasispecies assembly through variation
                  graph construction},
  journal      = {Bioinform.},
  volume       = {35},
  number       = {24},
  pages        = {5086--5094},
  year         = {2019},
  url          = {https://doi.org/10.1093/bioinformatics/btz443},
  doi          = {10.1093/BIOINFORMATICS/BTZ443},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/BaaijensRKSS19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/peerjpre/LaehnemannKSMHR19,
  author       = {David Laehnemann and
                  Johannes K{\"{o}}ster and
                  Ewa Szczurek and
                  Davis J. McCarthy and
                  Stephanie C. Hicks and
                  Mark D. Robinson and
                  Catalina A. Vallejos and
                  Niko Beerenwinkel and
                  Kieran R. Campbell and
                  Ahmed Mahfouz and
                  Luca Pinello and
                  Pavel Skums and
                  Alexandros Stamatakis and
                  Camille Stephan{-}Otto Attolini and
                  Samuel Aparicio and
                  Jasmijn A. Baaijens and
                  Marleen Balvert and
                  Buys de Barbanson and
                  Antonio Cappuccio and
                  Giacomo Corleone and
                  Bas E. Dutilh and
                  Maria Florescu and
                  Victor Guryev and
                  Rens Holmer and
                  Katharina Jahn and
                  Thamar Jessurun Lobo and
                  Emma M. Keizer and
                  Indu Khatri and
                  Szymon M. Kielbasa and
                  Jan O. Korbel and
                  Alexey M. Kozlov and
                  Tzu{-}Hao Kuo and
                  Boudewijn P. F. Lelieveldt and
                  Ion I. Mandoiu and
                  John C. Marioni and
                  Tobias Marschall and
                  Felix M{\"{o}}lder and
                  Amir Niknejad and
                  Lukasz Raczkowski and
                  Marcel J. T. Reinders and
                  Jeroen de Ridder and
                  Antoine{-}Emmanuel Saliba and
                  Antonios Somarakis and
                  Oliver Stegle and
                  Fabian J. Theis and
                  Huan Yang and
                  Alex Zelikovsky and
                  Alice C. McHardy and
                  Benjamin J. Raphael and
                  Sohrab P. Shah and
                  Alexander Sch{\"{o}}nhuth},
  title        = {12 Grand Challenges in Single-Cell Data Science},
  journal      = {PeerJ Prepr.},
  volume       = {7},
  pages        = {e27885},
  year         = {2019},
  url          = {https://doi.org/10.7287/peerj.preprints.27885v3},
  doi          = {10.7287/PEERJ.PREPRINTS.27885V3},
  timestamp    = {Thu, 09 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/peerjpre/LaehnemannKSMHR19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/siamam/BaaijensD16,
  author       = {Jasmijn A. Baaijens and
                  Jan Draisma},
  title        = {On the Existence of Identifiable Reparametrizations for Linear Compartment
                  Models},
  journal      = {{SIAM} J. Appl. Math.},
  volume       = {76},
  number       = {4},
  pages        = {1577--1605},
  year         = {2016},
  url          = {https://doi.org/10.1137/15M1038013},
  doi          = {10.1137/15M1038013},
  timestamp    = {Wed, 20 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/siamam/BaaijensD16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}