BibTeX records: Dina Demner-Fushman

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@article{DBLP:journals/jasis/RaeMD23,
  author       = {Alastair R. Rae and
                  James G. Mork and
                  Dina Demner{-}Fushman},
  title        = {The National Library of Medicine indexer assignment dataset: {A} new
                  large-scale dataset for reviewer assignment research},
  journal      = {J. Assoc. Inf. Sci. Technol.},
  volume       = {74},
  number       = {2},
  pages        = {205--218},
  year         = {2023},
  url          = {https://doi.org/10.1002/asi.24722},
  doi          = {10.1002/ASI.24722},
  timestamp    = {Tue, 28 Feb 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jasis/RaeMD23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/kbs/GuptaLGD23,
  author       = {Deepak Gupta and
                  Russell F. Loane and
                  Soumya Gayen and
                  Dina Demner{-}Fushman},
  title        = {Medical image retrieval via nearest neighbor search on pre-trained
                  image features},
  journal      = {Knowl. Based Syst.},
  volume       = {278},
  pages        = {110907},
  year         = {2023},
  url          = {https://doi.org/10.1016/j.knosys.2023.110907},
  doi          = {10.1016/J.KNOSYS.2023.110907},
  timestamp    = {Fri, 27 Oct 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/kbs/GuptaLGD23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bionlp/2023,
  editor       = {Dina Demner{-}Fushman and
                  Sophia Ananiadou and
                  Kevin Cohen},
  title        = {The 22nd Workshop on Biomedical Natural Language Processing and BioNLP
                  Shared Tasks, BioNLP@ACL 2023, Toronto, Canada, 13 July 2023},
  publisher    = {Association for Computational Linguistics},
  year         = {2023},
  url          = {https://aclanthology.org/volumes/2023.bionlp-1/},
  timestamp    = {Wed, 12 Jul 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/2023.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2305-04344,
  author       = {Deepak Gupta and
                  Dina Demner{-}Fushman},
  title        = {Empowering Language Model with Guided Knowledge Fusion for Biomedical
                  Document Re-ranking},
  journal      = {CoRR},
  volume       = {abs/2305.04344},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2305.04344},
  doi          = {10.48550/ARXIV.2305.04344},
  eprinttype    = {arXiv},
  eprint       = {2305.04344},
  timestamp    = {Fri, 12 May 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2305-04344.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2309-12224,
  author       = {Deepak Gupta and
                  Kush Attal and
                  Dina Demner{-}Fushman},
  title        = {Towards Answering Health-related Questions from Medical Videos: Datasets
                  and Approaches},
  journal      = {CoRR},
  volume       = {abs/2309.12224},
  year         = {2023},
  url          = {https://doi.org/10.48550/arXiv.2309.12224},
  doi          = {10.48550/ARXIV.2309.12224},
  eprinttype    = {arXiv},
  eprint       = {2309.12224},
  timestamp    = {Mon, 25 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2309-12224.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/OndovAD22,
  author       = {Brian D. Ondov and
                  Kush Attal and
                  Dina Demner{-}Fushman},
  title        = {A survey of automated methods for biomedical text simplification},
  journal      = {J. Am. Medical Informatics Assoc.},
  volume       = {29},
  number       = {11},
  pages        = {1976--1988},
  year         = {2022},
  url          = {https://doi.org/10.1093/jamia/ocac149},
  doi          = {10.1093/JAMIA/OCAC149},
  timestamp    = {Fri, 21 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jamia/OndovAD22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/YadavGAD22,
  author       = {Shweta Yadav and
                  Deepak Gupta and
                  Asma Ben Abacha and
                  Dina Demner{-}Fushman},
  title        = {Question-aware transformer models for consumer health question summarization},
  journal      = {J. Biomed. Informatics},
  volume       = {128},
  pages        = {104040},
  year         = {2022},
  url          = {https://doi.org/10.1016/j.jbi.2022.104040},
  doi          = {10.1016/J.JBI.2022.104040},
  timestamp    = {Mon, 27 Mar 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jbi/YadavGAD22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bionlp/GuptaD22,
  author       = {Deepak Gupta and
                  Dina Demner{-}Fushman},
  editor       = {Dina Demner{-}Fushman and
                  Kevin Bretonnel Cohen and
                  Sophia Ananiadou and
                  Junichi Tsujii},
  title        = {Overview of the MedVidQA 2022 Shared Task on Medical Video Question-Answering},
  booktitle    = {Proceedings of the 21st Workshop on Biomedical Language Processing,
                  BioNLP@ACL 2022, Dublin, Ireland, May 26, 2022},
  pages        = {264--274},
  publisher    = {Association for Computational Linguistics},
  year         = {2022},
  url          = {https://doi.org/10.18653/v1/2022.bionlp-1.25},
  doi          = {10.18653/V1/2022.BIONLP-1.25},
  timestamp    = {Mon, 01 Aug 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/GuptaD22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/trec/RobertsDVBH22,
  author       = {Kirk Roberts and
                  Dina Demner{-}Fushman and
                  Ellen M. Voorhees and
                  Steven Bedrick and
                  William R. Hersh},
  editor       = {Ian Soboroff and
                  Angela Ellis},
  title        = {Overview of the {TREC} 2022 Clinical Trials Track},
  booktitle    = {Proceedings of the Thirty-First Text REtrieval Conference, {TREC}
                  2022, online, November 15-19, 2022},
  series       = {{NIST} Special Publication},
  volume       = {500-338},
  publisher    = {National Institute of Standards and Technology {(NIST)}},
  year         = {2022},
  url          = {https://trec.nist.gov/pubs/trec31/papers/Overview\_trials.pdf},
  timestamp    = {Tue, 29 Aug 2023 17:20:28 +0200},
  biburl       = {https://dblp.org/rec/conf/trec/RobertsDVBH22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bionlp/2022,
  editor       = {Dina Demner{-}Fushman and
                  Kevin Bretonnel Cohen and
                  Sophia Ananiadou and
                  Junichi Tsujii},
  title        = {Proceedings of the 21st Workshop on Biomedical Language Processing,
                  BioNLP@ACL 2022, Dublin, Ireland, May 26, 2022},
  publisher    = {Association for Computational Linguistics},
  year         = {2022},
  url          = {https://aclanthology.org/volumes/2022.bionlp-1/},
  isbn         = {978-1-955917-27-8},
  timestamp    = {Fri, 27 May 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/2022.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2201-12888,
  author       = {Deepak Gupta and
                  Kush Attal and
                  Dina Demner{-}Fushman},
  title        = {A Dataset for Medical Instructional Video Classification and Question
                  Answering},
  journal      = {CoRR},
  volume       = {abs/2201.12888},
  year         = {2022},
  url          = {https://arxiv.org/abs/2201.12888},
  eprinttype    = {arXiv},
  eprint       = {2201.12888},
  timestamp    = {Wed, 02 Feb 2022 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2201-12888.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2206-06581,
  author       = {Shweta Yadav and
                  Deepak Gupta and
                  Dina Demner{-}Fushman},
  title        = {CHQ-Summ: {A} Dataset for Consumer Healthcare Question Summarization},
  journal      = {CoRR},
  volume       = {abs/2206.06581},
  year         = {2022},
  url          = {https://doi.org/10.48550/arXiv.2206.06581},
  doi          = {10.48550/ARXIV.2206.06581},
  eprinttype    = {arXiv},
  eprint       = {2206.06581},
  timestamp    = {Mon, 27 Mar 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2206-06581.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2209-14377,
  author       = {Travis R. Goodwin and
                  Dina Demner{-}Fushman},
  title        = {Clinical Language Understanding Evaluation {(CLUE)}},
  journal      = {CoRR},
  volume       = {abs/2209.14377},
  year         = {2022},
  url          = {https://doi.org/10.48550/arXiv.2209.14377},
  doi          = {10.48550/ARXIV.2209.14377},
  eprinttype    = {arXiv},
  eprint       = {2209.14377},
  timestamp    = {Thu, 06 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2209-14377.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2210-02401,
  author       = {Deepak Gupta and
                  Russell F. Loane and
                  Soumya Gayen and
                  Dina Demner{-}Fushman},
  title        = {Medical Image Retrieval via Nearest Neighbor Search on Pre-trained
                  Image Features},
  journal      = {CoRR},
  volume       = {abs/2210.02401},
  year         = {2022},
  url          = {https://doi.org/10.48550/arXiv.2210.02401},
  doi          = {10.48550/ARXIV.2210.02401},
  eprinttype    = {arXiv},
  eprint       = {2210.02401},
  timestamp    = {Fri, 07 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2210-02401.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2210-12242,
  author       = {Kush Attal and
                  Brian D. Ondov and
                  Dina Demner{-}Fushman},
  title        = {A Dataset for Plain Language Adaptation of Biomedical Abstracts},
  journal      = {CoRR},
  volume       = {abs/2210.12242},
  year         = {2022},
  url          = {https://doi.org/10.48550/arXiv.2210.12242},
  doi          = {10.48550/ARXIV.2210.12242},
  eprinttype    = {arXiv},
  eprint       = {2210.12242},
  timestamp    = {Fri, 21 Apr 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2210-12242.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/information/SarroutiAD21,
  author       = {Mourad Sarrouti and
                  Asma Ben Abacha and
                  Dina Demner{-}Fushman},
  title        = {Goal-Driven Visual Question Generation from Radiology Images},
  journal      = {Inf.},
  volume       = {12},
  number       = {8},
  pages        = {334},
  year         = {2021},
  url          = {https://doi.org/10.3390/info12080334},
  doi          = {10.3390/INFO12080334},
  timestamp    = {Thu, 16 Sep 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/information/SarroutiAD21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/RobertsABDLSVWH21,
  author       = {Kirk Roberts and
                  Tasmeer Alam and
                  Steven Bedrick and
                  Dina Demner{-}Fushman and
                  Kyle Lo and
                  Ian Soboroff and
                  Ellen M. Voorhees and
                  Lucy Lu Wang and
                  William R. Hersh},
  title        = {Searching for scientific evidence in a pandemic: An overview of {TREC-COVID}},
  journal      = {J. Biomed. Informatics},
  volume       = {121},
  pages        = {103865},
  year         = {2021},
  url          = {https://doi.org/10.1016/j.jbi.2021.103865},
  doi          = {10.1016/J.JBI.2021.103865},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jbi/RobertsABDLSVWH21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aaai/Demner-FushmanR21,
  author       = {Dina Demner{-}Fushman and
                  Willie J. Rogers and
                  James G. Mork},
  editor       = {Amir Pouran Ben Veyseh and
                  Franck Dernoncourt and
                  Thien Huu Nguyen and
                  Walter Chang and
                  Leo Anthony Celi},
  title        = {Automatic recognition of figurative language in biomedical articles},
  booktitle    = {Proceedings of the Workshop on Scientific Document Understanding co-located
                  with 35th {AAAI} Conference on Artificial Inteligence, SDU@AAAI 2021,
                  Virtual Event, February 9, 2021},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {2831},
  publisher    = {CEUR-WS.org},
  year         = {2021},
  url          = {https://ceur-ws.org/Vol-2831/paper9.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:22:15 +0100},
  biburl       = {https://dblp.org/rec/conf/aaai/Demner-FushmanR21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aaai/RogersRD21,
  author       = {Willie Rogers and
                  Alastair R. Rae and
                  Dina Demner{-}Fushman},
  editor       = {Amir Pouran Ben Veyseh and
                  Franck Dernoncourt and
                  Thien Huu Nguyen and
                  Walter Chang and
                  Leo Anthony Celi},
  title        = {{AI-NLM} exploration of the Acronym Identification Shared Task at
                  SDU@AAAI-21},
  booktitle    = {Proceedings of the Workshop on Scientific Document Understanding co-located
                  with 35th {AAAI} Conference on Artificial Inteligence, SDU@AAAI 2021,
                  Virtual Event, February 9, 2021},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {2831},
  publisher    = {CEUR-WS.org},
  year         = {2021},
  url          = {https://ceur-ws.org/Vol-2831/paper29.pdf},
  timestamp    = {Fri, 10 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/aaai/RogersRD21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/acl/YadavGAD20,
  author       = {Shweta Yadav and
                  Deepak Gupta and
                  Asma Ben Abacha and
                  Dina Demner{-}Fushman},
  editor       = {Chengqing Zong and
                  Fei Xia and
                  Wenjie Li and
                  Roberto Navigli},
  title        = {Reinforcement Learning for Abstractive Question Summarization with
                  Question-aware Semantic Rewards},
  booktitle    = {Proceedings of the 59th Annual Meeting of the Association for Computational
                  Linguistics and the 11th International Joint Conference on Natural
                  Language Processing, {ACL/IJCNLP} 2021, (Volume 2: Short Papers),
                  Virtual Event, August 1-6, 2021},
  pages        = {249--255},
  publisher    = {Association for Computational Linguistics},
  year         = {2021},
  url          = {https://doi.org/10.18653/v1/2021.acl-short.33},
  doi          = {10.18653/V1/2021.ACL-SHORT.33},
  timestamp    = {Mon, 27 Mar 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/acl/YadavGAD20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/CohenRABHVZD21,
  author       = {Kevin Bretonnel Cohen and
                  Anna M. Ripple and
                  Asma Ben Abacha and
                  Olivier Bodenreider and
                  Orin Hargraves and
                  Karin Verspoor and
                  Pierre Zweigenbaum and
                  Dina Demner{-}Fushman},
  title        = {Reproducibility in biomedical natural language processing: {A} {FAIR}
                  approach to what we need to know},
  booktitle    = {{AMIA} 2021, American Medical Informatics Association Annual Symposium,
                  San Diego, CA, USA, October 30, 2021 - November 3, 2021},
  publisher    = {{AMIA}},
  year         = {2021},
  url          = {https://knowledge.amia.org/74229-amia-1.4622266/t004-1.4626008/t004-1.4626009/3577532-1.4626385/3575918-1.4626382},
  timestamp    = {Fri, 03 Feb 2023 12:04:40 +0100},
  biburl       = {https://dblp.org/rec/conf/amia/CohenRABHVZD21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bionlp/AbachaMZSLD21,
  author       = {Asma Ben Abacha and
                  Yassine Mrabet and
                  Yuhao Zhang and
                  Chaitanya Shivade and
                  Curtis P. Langlotz and
                  Dina Demner{-}Fushman},
  editor       = {Dina Demner{-}Fushman and
                  Kevin Bretonnel Cohen and
                  Sophia Ananiadou and
                  Junichi Tsujii},
  title        = {Overview of the {MEDIQA} 2021 Shared Task on Summarization in the
                  Medical Domain},
  booktitle    = {Proceedings of the 20th Workshop on Biomedical Language Processing,
                  BioNLP@NAACL-HLT 2021, Online, June 11, 2021},
  pages        = {74--85},
  publisher    = {Association for Computational Linguistics},
  year         = {2021},
  url          = {https://doi.org/10.18653/v1/2021.bionlp-1.8},
  doi          = {10.18653/V1/2021.BIONLP-1.8},
  timestamp    = {Fri, 26 Nov 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bionlp/AbachaMZSLD21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/clef/RaeMD21,
  author       = {Alastair R. Rae and
                  James G. Mork and
                  Dina Demner{-}Fushman},
  editor       = {Guglielmo Faggioli and
                  Nicola Ferro and
                  Alexis Joly and
                  Maria Maistro and
                  Florina Piroi},
  title        = {A Neural Text Ranking Approach for Automatic MeSH Indexing},
  booktitle    = {Proceedings of the Working Notes of {CLEF} 2021 - Conference and Labs
                  of the Evaluation Forum, Bucharest, Romania, September 21st - to -
                  24th, 2021},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {2936},
  pages        = {302--312},
  publisher    = {CEUR-WS.org},
  year         = {2021},
  url          = {https://ceur-ws.org/Vol-2936/paper-22.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:42 +0100},
  biburl       = {https://dblp.org/rec/conf/clef/RaeMD21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/clef/SarroutiGAD21,
  author       = {Mourad Sarrouti and
                  Deepak Gupta and
                  Asma Ben Abacha and
                  Dina Demner{-}Fushman},
  editor       = {Guglielmo Faggioli and
                  Nicola Ferro and
                  Alexis Joly and
                  Maria Maistro and
                  Florina Piroi},
  title        = {{NLM} at BioASQ Synergy 2021: Deep Learning-based Methods for Biomedical
                  Semantic Question Answering about {COVID-19}},
  booktitle    = {Proceedings of the Working Notes of {CLEF} 2021 - Conference and Labs
                  of the Evaluation Forum, Bucharest, Romania, September 21st - to -
                  24th, 2021},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {2936},
  pages        = {335--350},
  publisher    = {CEUR-WS.org},
  year         = {2021},
  url          = {https://ceur-ws.org/Vol-2936/paper-25.pdf},
  timestamp    = {Fri, 10 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/clef/SarroutiGAD21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/clef/IonescuMPASDHKL21,
  author       = {Bogdan Ionescu and
                  Henning M{\"{u}}ller and
                  Renaud P{\'{e}}teri and
                  Asma Ben Abacha and
                  Mourad Sarrouti and
                  Dina Demner{-}Fushman and
                  Sadid A. Hasan and
                  Serge Kozlovski and
                  Vitali Liauchuk and
                  Yashin Dicente Cid and
                  Vassili Kovalev and
                  Obioma Pelka and
                  Alba Garc{\'{\i}}a Seco de Herrera and
                  Janadhip Jacutprakart and
                  Christoph M. Friedrich and
                  Raul Berari and
                  Andrei Tauteanu and
                  Dimitri Fichou and
                  Paul Brie and
                  Mihai Dogariu and
                  Liviu{-}Daniel Stefan and
                  Mihai Gabriel Constantin and
                  Jon Chamberlain and
                  Antonio Campello and
                  Adrian F. Clark and
                  Thomas Oliver and
                  Hassan Moustahfid and
                  Adrian Popescu and
                  Jerome Deshayes{-}Chossart},
  editor       = {K. Sel{\c{c}}uk Candan and
                  Bogdan Ionescu and
                  Lorraine Goeuriot and
                  Birger Larsen and
                  Henning M{\"{u}}ller and
                  Alexis Joly and
                  Maria Maistro and
                  Florina Piroi and
                  Guglielmo Faggioli and
                  Nicola Ferro},
  title        = {Overview of the ImageCLEF 2021: Multimedia Retrieval in Medical, Nature,
                  Internet and Social Media Applications},
  booktitle    = {Experimental {IR} Meets Multilinguality, Multimodality, and Interaction
                  - 12th International Conference of the {CLEF} Association, {CLEF}
                  2021, Virtual Event, September 21-24, 2021, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {12880},
  pages        = {345--370},
  publisher    = {Springer},
  year         = {2021},
  url          = {https://doi.org/10.1007/978-3-030-85251-1\_23},
  doi          = {10.1007/978-3-030-85251-1\_23},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/clef/IonescuMPASDHKL21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/clef/AbachaSDHM21,
  author       = {Asma Ben Abacha and
                  Mourad Sarrouti and
                  Dina Demner{-}Fushman and
                  Sadid A. Hasan and
                  Henning M{\"{u}}ller},
  editor       = {Guglielmo Faggioli and
                  Nicola Ferro and
                  Alexis Joly and
                  Maria Maistro and
                  Florina Piroi},
  title        = {Overview of the VQA-Med Task at ImageCLEF 2021: Visual Question Answering
                  and Generation in the Medical Domain},
  booktitle    = {Proceedings of the Working Notes of {CLEF} 2021 - Conference and Labs
                  of the Evaluation Forum, Bucharest, Romania, September 21st - to -
                  24th, 2021},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {2936},
  pages        = {1081--1088},
  publisher    = {CEUR-WS.org},
  year         = {2021},
  url          = {https://ceur-ws.org/Vol-2936/paper-87.pdf},
  timestamp    = {Fri, 10 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/clef/AbachaSDHM21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ecir/IonescuMPADHSPF21,
  author       = {Bogdan Ionescu and
                  Henning M{\"{u}}ller and
                  Renaud P{\'{e}}teri and
                  Asma Ben Abacha and
                  Dina Demner{-}Fushman and
                  Sadid A. Hasan and
                  Mourad Sarrouti and
                  Obioma Pelka and
                  Christoph M. Friedrich and
                  Alba Garcia Seco de Herrera and
                  Janadhip Jacutprakart and
                  Vassili Kovalev and
                  Serge Kozlovski and
                  Vitali Liauchuk and
                  Yashin Dicente Cid and
                  Jon Chamberlain and
                  Adrian F. Clark and
                  Antonio Campello and
                  Hassan Moustahfid and
                  Thomas Oliver and
                  Abigail Schulz and
                  Paul Brie and
                  Raul Berari and
                  Dimitri Fichou and
                  Andrei Tauteanu and
                  Mihai Dogariu and
                  Liviu{-}Daniel Stefan and
                  Mihai Gabriel Constantin and
                  J{\'{e}}r{\^{o}}me Deshayes and
                  Adrian Popescu},
  editor       = {Djoerd Hiemstra and
                  Marie{-}Francine Moens and
                  Josiane Mothe and
                  Raffaele Perego and
                  Martin Potthast and
                  Fabrizio Sebastiani},
  title        = {The 2021 ImageCLEF Benchmark: Multimedia Retrieval in Medical, Nature,
                  Internet and Social Media Applications},
  booktitle    = {Advances in Information Retrieval - 43rd European Conference on {IR}
                  Research, {ECIR} 2021, Virtual Event, March 28 - April 1, 2021, Proceedings,
                  Part {II}},
  series       = {Lecture Notes in Computer Science},
  volume       = {12657},
  pages        = {616--623},
  publisher    = {Springer},
  year         = {2021},
  url          = {https://doi.org/10.1007/978-3-030-72240-1\_72},
  doi          = {10.1007/978-3-030-72240-1\_72},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ecir/IonescuMPADHSPF21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/emnlp/SarroutiAMD21,
  author       = {Mourad Sarrouti and
                  Asma Ben Abacha and
                  Yassine Mrabet and
                  Dina Demner{-}Fushman},
  editor       = {Marie{-}Francine Moens and
                  Xuanjing Huang and
                  Lucia Specia and
                  Scott Wen{-}tau Yih},
  title        = {Evidence-based Fact-Checking of Health-related Claims},
  booktitle    = {Findings of the Association for Computational Linguistics: {EMNLP}
                  2021, Virtual Event / Punta Cana, Dominican Republic, 16-20 November,
                  2021},
  pages        = {3499--3512},
  publisher    = {Association for Computational Linguistics},
  year         = {2021},
  url          = {https://doi.org/10.18653/v1/2021.findings-emnlp.297},
  doi          = {10.18653/V1/2021.FINDINGS-EMNLP.297},
  timestamp    = {Fri, 16 Feb 2024 08:27:36 +0100},
  biburl       = {https://dblp.org/rec/conf/emnlp/SarroutiAMD21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ichi/SarroutiAD21,
  author       = {Mourad Sarrouti and
                  Asma Ben Abacha and
                  Dina Demner{-}Fushman},
  title        = {Multi-Task Transfer Learning with Data Augmentation for Recognizing
                  Question Entailment in the Medical Domain},
  booktitle    = {9th {IEEE} International Conference on Healthcare Informatics, {ICHI}
                  2021, Victoria, BC, Canada, August 9-12, 2021},
  pages        = {339--346},
  publisher    = {{IEEE}},
  year         = {2021},
  url          = {https://doi.org/10.1109/ICHI52183.2021.00058},
  doi          = {10.1109/ICHI52183.2021.00058},
  timestamp    = {Wed, 20 Oct 2021 16:44:24 +0200},
  biburl       = {https://dblp.org/rec/conf/ichi/SarroutiAD21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bionlp/2021,
  editor       = {Dina Demner{-}Fushman and
                  Kevin Bretonnel Cohen and
                  Sophia Ananiadou and
                  Junichi Tsujii},
  title        = {Proceedings of the 20th Workshop on Biomedical Language Processing,
                  BioNLP@NAACL-HLT 2021, Online, June 11, 2021},
  publisher    = {Association for Computational Linguistics},
  year         = {2021},
  url          = {https://aclanthology.org/volumes/2021.bionlp-1/},
  isbn         = {978-1-954085-40-4},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/2021.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2104-09632,
  author       = {Kirk Roberts and
                  Tasmeer Alam and
                  Steven Bedrick and
                  Dina Demner{-}Fushman and
                  Kyle Lo and
                  Ian Soboroff and
                  Ellen M. Voorhees and
                  Lucy Lu Wang and
                  William R. Hersh},
  title        = {Searching for Scientific Evidence in a Pandemic: An Overview of {TREC-COVID}},
  journal      = {CoRR},
  volume       = {abs/2104.09632},
  year         = {2021},
  url          = {https://arxiv.org/abs/2104.09632},
  eprinttype    = {arXiv},
  eprint       = {2104.09632},
  timestamp    = {Mon, 26 Apr 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2104-09632.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2106-00219,
  author       = {Shweta Yadav and
                  Deepak Gupta and
                  Asma Ben Abacha and
                  Dina Demner{-}Fushman},
  title        = {Question-aware Transformer Models for Consumer Health Question Summarization},
  journal      = {CoRR},
  volume       = {abs/2106.00219},
  year         = {2021},
  url          = {https://arxiv.org/abs/2106.00219},
  eprinttype    = {arXiv},
  eprint       = {2106.00219},
  timestamp    = {Mon, 27 Mar 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2106-00219.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2107-00176,
  author       = {Shweta Yadav and
                  Deepak Gupta and
                  Asma Ben Abacha and
                  Dina Demner{-}Fushman},
  title        = {Reinforcement Learning for Abstractive Question Summarization with
                  Question-aware Semantic Rewards},
  journal      = {CoRR},
  volume       = {abs/2107.00176},
  year         = {2021},
  url          = {https://arxiv.org/abs/2107.00176},
  eprinttype    = {arXiv},
  eprint       = {2107.00176},
  timestamp    = {Mon, 27 Mar 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2107-00176.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/Demner-FushmanM20,
  author       = {Dina Demner{-}Fushman and
                  Yassine Mrabet and
                  Asma Ben Abacha},
  title        = {Consumer health information and question answering: helping consumers
                  find answers to their health-related information needs},
  journal      = {J. Am. Medical Informatics Assoc.},
  volume       = {27},
  number       = {2},
  pages        = {194--201},
  year         = {2020},
  url          = {https://doi.org/10.1093/jamia/ocz152},
  doi          = {10.1093/JAMIA/OCZ152},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jamia/Demner-FushmanM20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/GoodwinD20,
  author       = {Travis R. Goodwin and
                  Dina Demner{-}Fushman},
  title        = {A customizable deep learning model for nosocomial risk prediction
                  from critical care notes with indirect supervision},
  journal      = {J. Am. Medical Informatics Assoc.},
  volume       = {27},
  number       = {4},
  pages        = {567--576},
  year         = {2020},
  url          = {https://doi.org/10.1093/jamia/ocaa004},
  doi          = {10.1093/JAMIA/OCAA004},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jamia/GoodwinD20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/RobertsABDLSVWH20,
  author       = {Kirk Roberts and
                  Tasmeer Alam and
                  Steven Bedrick and
                  Dina Demner{-}Fushman and
                  Kyle Lo and
                  Ian Soboroff and
                  Ellen M. Voorhees and
                  Lucy Lu Wang and
                  William R. Hersh},
  title        = {{TREC-COVID:} rationale and structure of an information retrieval
                  shared task for {COVID-19}},
  journal      = {J. Am. Medical Informatics Assoc.},
  volume       = {27},
  number       = {9},
  pages        = {1431--1436},
  year         = {2020},
  url          = {https://doi.org/10.1093/jamia/ocaa091},
  doi          = {10.1093/JAMIA/OCAA091},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jamia/RobertsABDLSVWH20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/DattaSRSDR20,
  author       = {Surabhi Datta and
                  Yuqi Si and
                  Laritza Rodriguez and
                  Sonya E. Shooshan and
                  Dina Demner{-}Fushman and
                  Kirk Roberts},
  title        = {Understanding spatial language in radiology: Representation framework,
                  annotation, and spatial relation extraction from chest X-ray reports
                  using deep learning},
  journal      = {J. Biomed. Informatics},
  volume       = {108},
  pages        = {103473},
  year         = {2020},
  url          = {https://doi.org/10.1016/j.jbi.2020.103473},
  doi          = {10.1016/J.JBI.2020.103473},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jbi/DattaSRSDR20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/sigir/VoorheesABDHLRS20,
  author       = {Ellen M. Voorhees and
                  Tasmeer Alam and
                  Steven Bedrick and
                  Dina Demner{-}Fushman and
                  William R. Hersh and
                  Kyle Lo and
                  Kirk Roberts and
                  Ian Soboroff and
                  Lucy Lu Wang},
  title        = {{TREC-COVID:} constructing a pandemic information retrieval test collection},
  journal      = {{SIGIR} Forum},
  volume       = {54},
  number       = {1},
  pages        = {1:1--1:12},
  year         = {2020},
  url          = {https://doi.org/10.1145/3451964.3451965},
  doi          = {10.1145/3451964.3451965},
  timestamp    = {Mon, 26 Apr 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/sigir/VoorheesABDHLRS20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RaePMD20,
  author       = {Alastair R. Rae and
                  David O. Pritchard and
                  James G. Mork and
                  Dina Demner{-}Fushman},
  title        = {Automatic MeSH Indexing: Revisiting the Subheading Attachment Problem},
  booktitle    = {{AMIA} 2020, American Medical Informatics Association Annual Symposium,
                  Virtual Event, USA, November 14-18, 2020},
  publisher    = {{AMIA}},
  year         = {2020},
  url          = {https://knowledge.amia.org/72332-amia-1.4602255/t003-1.4606204/t003-1.4606205/3407703-1.4606335/3413087-1.4606332},
  timestamp    = {Wed, 04 Aug 2021 11:13:03 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/RaePMD20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/clef/AbachaDHDM20,
  author       = {Asma Ben Abacha and
                  Vivek V. Datla and
                  Sadid A. Hasan and
                  Dina Demner{-}Fushman and
                  Henning M{\"{u}}ller},
  editor       = {Linda Cappellato and
                  Carsten Eickhoff and
                  Nicola Ferro and
                  Aur{\'{e}}lie N{\'{e}}v{\'{e}}ol},
  title        = {Overview of the VQA-Med Task at ImageCLEF 2020: Visual Question Answering
                  and Generation in the Medical Domain},
  booktitle    = {Working Notes of {CLEF} 2020 - Conference and Labs of the Evaluation
                  Forum, Thessaloniki, Greece, September 22-25, 2020},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {2696},
  publisher    = {CEUR-WS.org},
  year         = {2020},
  url          = {https://ceur-ws.org/Vol-2696/paper\_106.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:35 +0100},
  biburl       = {https://dblp.org/rec/conf/clef/AbachaDHDM20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/clef/IonescuMPADHDKL20,
  author       = {Bogdan Ionescu and
                  Henning M{\"{u}}ller and
                  Renaud P{\'{e}}teri and
                  Asma Ben Abacha and
                  Vivek V. Datla and
                  Sadid A. Hasan and
                  Dina Demner{-}Fushman and
                  Serge Kozlovski and
                  Vitali Liauchuk and
                  Yashin Dicente Cid and
                  Vassili Kovalev and
                  Obioma Pelka and
                  Christoph M. Friedrich and
                  Alba Garc{\'{\i}}a Seco de Herrera and
                  Van{-}Tu Ninh and
                  Tu{-}Khiem Le and
                  Liting Zhou and
                  Luca Piras and
                  Michael Riegler and
                  P{\aa}l Halvorsen and
                  Minh{-}Triet Tran and
                  Mathias Lux and
                  Cathal Gurrin and
                  Duc{-}Tien Dang{-}Nguyen and
                  Jon Chamberlain and
                  Adrian F. Clark and
                  Antonio Campello and
                  Dimitri Fichou and
                  Raul Berari and
                  Paul Brie and
                  Mihai Dogariu and
                  Liviu{-}Daniel Stefan and
                  Mihai Gabriel Constantin},
  editor       = {Avi Arampatzis and
                  Evangelos Kanoulas and
                  Theodora Tsikrika and
                  Stefanos Vrochidis and
                  Hideo Joho and
                  Christina Lioma and
                  Carsten Eickhoff and
                  Aur{\'{e}}lie N{\'{e}}v{\'{e}}ol and
                  Linda Cappellato and
                  Nicola Ferro},
  title        = {Overview of the ImageCLEF 2020: Multimedia Retrieval in Medical, Lifelogging,
                  Nature, and Internet Applications},
  booktitle    = {Experimental {IR} Meets Multilinguality, Multimodality, and Interaction
                  - 11th International Conference of the {CLEF} Association, {CLEF}
                  2020, Thessaloniki, Greece, September 22-25, 2020, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {12260},
  pages        = {311--341},
  publisher    = {Springer},
  year         = {2020},
  url          = {https://doi.org/10.1007/978-3-030-58219-7\_22},
  doi          = {10.1007/978-3-030-58219-7\_22},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/clef/IonescuMPADHDKL20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/coling/GoodwinSD20,
  author       = {Travis R. Goodwin and
                  Max E. Savery and
                  Dina Demner{-}Fushman},
  editor       = {Donia Scott and
                  N{\'{u}}ria Bel and
                  Chengqing Zong},
  title        = {Flight of the PEGASUS? Comparing Transformers on Few-shot and Zero-shot
                  Multi-document Abstractive Summarization},
  booktitle    = {Proceedings of the 28th International Conference on Computational
                  Linguistics, {COLING} 2020, Barcelona, Spain (Online), December 8-13,
                  2020},
  pages        = {5640--5646},
  publisher    = {International Committee on Computational Linguistics},
  year         = {2020},
  url          = {https://doi.org/10.18653/v1/2020.coling-main.494},
  doi          = {10.18653/V1/2020.COLING-MAIN.494},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/coling/GoodwinSD20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/coling/MrabetD20,
  author       = {Yassine Mrabet and
                  Dina Demner{-}Fushman},
  editor       = {Donia Scott and
                  N{\'{u}}ria Bel and
                  Chengqing Zong},
  title        = {{HOLMS:} Alternative Summary Evaluation with Large Language Models},
  booktitle    = {Proceedings of the 28th International Conference on Computational
                  Linguistics, {COLING} 2020, Barcelona, Spain (Online), December 8-13,
                  2020},
  pages        = {5679--5688},
  publisher    = {International Committee on Computational Linguistics},
  year         = {2020},
  url          = {https://doi.org/10.18653/v1/2020.coling-main.498},
  doi          = {10.18653/V1/2020.COLING-MAIN.498},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/coling/MrabetD20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ecir/IonescuMPDZPRHT20,
  author       = {Bogdan Ionescu and
                  Henning M{\"{u}}ller and
                  Renaud P{\'{e}}teri and
                  Duc{-}Tien Dang{-}Nguyen and
                  Liting Zhou and
                  Luca Piras and
                  Michael Riegler and
                  P{\aa}l Halvorsen and
                  Minh{-}Triet Tran and
                  Mathias Lux and
                  Cathal Gurrin and
                  Jon Chamberlain and
                  Adrian F. Clark and
                  Antonio Campello and
                  Alba Garcia Seco de Herrera and
                  Asma Ben Abacha and
                  Vivek V. Datla and
                  Sadid A. Hasan and
                  Joey Liu and
                  Dina Demner{-}Fushman and
                  Obioma Pelka and
                  Christoph M. Friedrich and
                  Yashin Dicente Cid and
                  Serge Kozlovski and
                  Vitali Liauchuk and
                  Vassili Kovalev and
                  Raul Berari and
                  Paul Brie and
                  Dimitri Fichou and
                  Mihai Dogariu and
                  Liviu{-}Daniel Stefan and
                  Mihai Gabriel Constantin},
  editor       = {Joemon M. Jose and
                  Emine Yilmaz and
                  Jo{\~{a}}o Magalh{\~{a}}es and
                  Pablo Castells and
                  Nicola Ferro and
                  M{\'{a}}rio J. Silva and
                  Fl{\'{a}}vio Martins},
  title        = {ImageCLEF 2020: Multimedia Retrieval in Lifelogging, Medical, Nature,
                  and Internet Applications},
  booktitle    = {Advances in Information Retrieval - 42nd European Conference on {IR}
                  Research, {ECIR} 2020, Lisbon, Portugal, April 14-17, 2020, Proceedings,
                  Part {II}},
  series       = {Lecture Notes in Computer Science},
  volume       = {12036},
  pages        = {533--541},
  publisher    = {Springer},
  year         = {2020},
  url          = {https://doi.org/10.1007/978-3-030-45442-5\_69},
  doi          = {10.1007/978-3-030-45442-5\_69},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ecir/IonescuMPDZPRHT20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/emnlp/GoodwinSD20,
  author       = {Travis R. Goodwin and
                  Max E. Savery and
                  Dina Demner{-}Fushman},
  editor       = {Trevor Cohn and
                  Yulan He and
                  Yang Liu},
  title        = {Towards Zero Shot Conditional Summarization with Adaptive Multi-task
                  Fine-Tuning},
  booktitle    = {Findings of the Association for Computational Linguistics: {EMNLP}
                  2020, Online Event, 16-20 November 2020},
  series       = {Findings of {ACL}},
  volume       = {{EMNLP} 2020},
  pages        = {3215--3226},
  publisher    = {Association for Computational Linguistics},
  year         = {2020},
  url          = {https://doi.org/10.18653/v1/2020.findings-emnlp.289},
  doi          = {10.18653/V1/2020.FINDINGS-EMNLP.289},
  timestamp    = {Wed, 23 Mar 2022 10:11:55 +0100},
  biburl       = {https://dblp.org/rec/conf/emnlp/GoodwinSD20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/trec/MrabetSAGGRRD20,
  author       = {Yassine Mrabet and
                  Mourad Sarrouti and
                  Asma Ben Abacha and
                  Soumya Gayen and
                  Travis R. Goodwin and
                  Alastair R. Rae and
                  Willie Rogers and
                  Dina Demner{-}Fushman},
  editor       = {Ellen M. Voorhees and
                  Angela Ellis},
  title        = {{NLM} at {TREC} 2020 Health Misinformation and Deep Learning Tracks},
  booktitle    = {Proceedings of the Twenty-Ninth Text REtrieval Conference, {TREC}
                  2020, Virtual Event [Gaithersburg, Maryland, USA], November 16-20,
                  2020},
  series       = {{NIST} Special Publication},
  volume       = {1266},
  publisher    = {National Institute of Standards and Technology {(NIST)}},
  year         = {2020},
  url          = {https://trec.nist.gov/pubs/trec29/papers/NLM.HM.DL.pdf},
  timestamp    = {Wed, 07 Jul 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/trec/MrabetSAGGRRD20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/trec/RobertsDVBH20,
  author       = {Kirk Roberts and
                  Dina Demner{-}Fushman and
                  Ellen M. Voorhees and
                  Steven Bedrick and
                  William R. Hersh},
  editor       = {Ellen M. Voorhees and
                  Angela Ellis},
  title        = {Overview of the {TREC} 2020 Precision Medicine Track},
  booktitle    = {Proceedings of the Twenty-Ninth Text REtrieval Conference, {TREC}
                  2020, Virtual Event [Gaithersburg, Maryland, USA], November 16-20,
                  2020},
  series       = {{NIST} Special Publication},
  volume       = {1266},
  publisher    = {National Institute of Standards and Technology {(NIST)}},
  year         = {2020},
  url          = {https://trec.nist.gov/pubs/trec29/papers/OVERVIEW.PM.pdf},
  timestamp    = {Wed, 07 Jul 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/trec/RobertsDVBH20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bionlp/2020,
  editor       = {Dina Demner{-}Fushman and
                  Kevin Bretonnel Cohen and
                  Sophia Ananiadou and
                  Junichi Tsujii},
  title        = {Proceedings of the 19th SIGBioMed Workshop on Biomedical Language
                  Processing, BioNLP 2020, Online, July 9, 2020},
  publisher    = {Association for Computational Linguistics},
  year         = {2020},
  url          = {https://aclanthology.org/volumes/2020.bionlp-1/},
  isbn         = {978-1-952148-09-5},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/2020.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2005-04474,
  author       = {Ellen M. Voorhees and
                  Tasmeer Alam and
                  Steven Bedrick and
                  Dina Demner{-}Fushman and
                  William R. Hersh and
                  Kyle Lo and
                  Kirk Roberts and
                  Ian Soboroff and
                  Lucy Lu Wang},
  title        = {{TREC-COVID:} Constructing a Pandemic Information Retrieval Test Collection},
  journal      = {CoRR},
  volume       = {abs/2005.04474},
  year         = {2020},
  url          = {https://arxiv.org/abs/2005.04474},
  eprinttype    = {arXiv},
  eprint       = {2005.04474},
  timestamp    = {Sat, 23 Jan 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2005-04474.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2005-09067,
  author       = {Max E. Savery and
                  Asma Ben Abacha and
                  Soumya Gayen and
                  Dina Demner{-}Fushman},
  title        = {Question-Driven Summarization of Answers to Consumer Health Questions},
  journal      = {CoRR},
  volume       = {abs/2005.09067},
  year         = {2020},
  url          = {https://arxiv.org/abs/2005.09067},
  eprinttype    = {arXiv},
  eprint       = {2005.09067},
  timestamp    = {Fri, 22 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2005-09067.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/AbachaD19,
  author       = {Asma Ben Abacha and
                  Dina Demner{-}Fushman},
  title        = {A question-entailment approach to question answering},
  journal      = {{BMC} Bioinform.},
  volume       = {20},
  number       = {1},
  pages        = {511:1--511:23},
  year         = {2019},
  url          = {https://doi.org/10.1186/s12859-019-3119-4},
  doi          = {10.1186/S12859-019-3119-4},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/AbachaD19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/LuASD19,
  author       = {Chris J. Lu and
                  Alan R. Aronson and
                  Sonya E. Shooshan and
                  Dina Demner{-}Fushman},
  title        = {Spell checker for consumer language (CSpell)},
  journal      = {J. Am. Medical Informatics Assoc.},
  volume       = {26},
  number       = {3},
  pages        = {211--218},
  year         = {2019},
  url          = {https://doi.org/10.1093/jamia/ocy171},
  doi          = {10.1093/JAMIA/OCY171},
  timestamp    = {Sat, 30 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jamia/LuASD19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/acl/AbachaD19,
  author       = {Asma Ben Abacha and
                  Dina Demner{-}Fushman},
  editor       = {Anna Korhonen and
                  David R. Traum and
                  Llu{\'{\i}}s M{\`{a}}rquez},
  title        = {On the Summarization of Consumer Health Questions},
  booktitle    = {Proceedings of the 57th Conference of the Association for Computational
                  Linguistics, {ACL} 2019, Florence, Italy, July 28- August 2, 2019,
                  Volume 1: Long Papers},
  pages        = {2228--2234},
  publisher    = {Association for Computational Linguistics},
  year         = {2019},
  url          = {https://doi.org/10.18653/v1/p19-1215},
  doi          = {10.18653/V1/P19-1215},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/acl/AbachaD19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/GoodwinD19,
  author       = {Travis R. Goodwin and
                  Dina Demner{-}Fushman},
  title        = {Deep Learning from Incomplete Data: Detecting Imminent Risk of Hospital-acquired
                  Pneumonia in {ICU} Patients},
  booktitle    = {{AMIA} 2019, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 16-20, 2019},
  publisher    = {{AMIA}},
  year         = {2019},
  url          = {https://knowledge.amia.org/69862-amia-1.4570936/t004-1.4574923/t004-1.4574924/3200990-1.4575090/3202990-1.4575087},
  timestamp    = {Wed, 04 Aug 2021 11:13:06 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/GoodwinD19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/LuPD19,
  author       = {Chris J. Lu and
                  Amanda Payne and
                  Dina Demner{-}Fushman},
  title        = {Classification Types: {A} New Feature in the {SPECIALIST} Lexicon},
  booktitle    = {{AMIA} 2019, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 16-20, 2019},
  publisher    = {{AMIA}},
  year         = {2019},
  url          = {https://knowledge.amia.org/69862-amia-1.4570936/t007-1.4573510/t007-1.4573511/3202242-1.4574025/3197822-1.4574022},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/LuPD19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/MaoFD19,
  author       = {Yuqing Mao and
                  Kin Wah Fung and
                  Dina Demner{-}Fushman},
  title        = {Drug-drug Interaction Extraction via Transfer Learning},
  booktitle    = {{AMIA} 2019, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 16-20, 2019},
  publisher    = {{AMIA}},
  year         = {2019},
  url          = {https://knowledge.amia.org/69862-amia-1.4570936/t007-1.4573510/t007-1.4573511/3202908-1.4574010/3194973-1.4574007},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/MaoFD19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RaeSMD19,
  author       = {Alastair R. Rae and
                  Max E. Savery and
                  James G. Mork and
                  Dina Demner{-}Fushman},
  title        = {A High Recall Classifier for Selecting Articles for {MEDLINE} Indexing},
  booktitle    = {{AMIA} 2019, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 16-20, 2019},
  publisher    = {{AMIA}},
  year         = {2019},
  url          = {https://knowledge.amia.org/69862-amia-1.4570936/t004-1.4574923/t004-1.4574924/3202756-1.4575006/3201202-1.4575003},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/RaeSMD19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/SaveryHMPSRD19,
  author       = {Max E. Savery and
                  Melanie Huston and
                  James G. Mork and
                  Olga Printseva and
                  Susan Schmidt and
                  Alastair R. Rae and
                  Dina Demner{-}Fushman},
  title        = {Evaluation of System for Selective Indexing Classification},
  booktitle    = {{AMIA} 2019, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 16-20, 2019},
  publisher    = {{AMIA}},
  year         = {2019},
  url          = {https://knowledge.amia.org/69862-amia-1.4570936/t007-1.4573510/t007-1.4573511/3202478-1.4573779/3201196-1.4573776},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/SaveryHMPSRD19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bionlp/AbachaSD19,
  author       = {Asma Ben Abacha and
                  Chaitanya Shivade and
                  Dina Demner{-}Fushman},
  editor       = {Dina Demner{-}Fushman and
                  Kevin Bretonnel Cohen and
                  Sophia Ananiadou and
                  Junichi Tsujii},
  title        = {Overview of the {MEDIQA} 2019 Shared Task on Textual Inference, Question
                  Entailment and Question Answering},
  booktitle    = {Proceedings of the 18th BioNLP Workshop and Shared Task, BioNLP@ACL
                  2019, Florence, Italy, August 1, 2019},
  pages        = {370--379},
  publisher    = {Association for Computational Linguistics},
  year         = {2019},
  url          = {https://doi.org/10.18653/v1/w19-5039},
  doi          = {10.18653/V1/W19-5039},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/AbachaSD19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/clef/AbachaHDLDM19,
  author       = {Asma Ben Abacha and
                  Sadid A. Hasan and
                  Vivek V. Datla and
                  Joey Liu and
                  Dina Demner{-}Fushman and
                  Henning M{\"{u}}ller},
  editor       = {Linda Cappellato and
                  Nicola Ferro and
                  David E. Losada and
                  Henning M{\"{u}}ller},
  title        = {VQA-Med: Overview of the Medical Visual Question Answering Task at
                  ImageCLEF 2019},
  booktitle    = {Working Notes of {CLEF} 2019 - Conference and Labs of the Evaluation
                  Forum, Lugano, Switzerland, September 9-12, 2019},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {2380},
  publisher    = {CEUR-WS.org},
  year         = {2019},
  url          = {https://ceur-ws.org/Vol-2380/paper\_272.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:41 +0100},
  biburl       = {https://dblp.org/rec/conf/clef/AbachaHDLDM19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/clef/IonescuMPCLKKTA19,
  author       = {Bogdan Ionescu and
                  Henning M{\"{u}}ller and
                  Renaud P{\'{e}}teri and
                  Yashin Dicente Cid and
                  Vitali Liauchuk and
                  Vassili Kovalev and
                  Dzmitri Klimuk and
                  Aleh Tarasau and
                  Asma Ben Abacha and
                  Sadid A. Hasan and
                  Vivek V. Datla and
                  Joey Liu and
                  Dina Demner{-}Fushman and
                  Duc{-}Tien Dang{-}Nguyen and
                  Luca Piras and
                  Michael Riegler and
                  Minh{-}Triet Tran and
                  Mathias Lux and
                  Cathal Gurrin and
                  Obioma Pelka and
                  Christoph M. Friedrich and
                  Alba Garcia Seco de Herrera and
                  Narciso Garc{\'{\i}}a and
                  Ergina Kavallieratou and
                  Carlos Roberto del{-}Blanco and
                  Carlos Cuevas and
                  Nikos Vasilopoulos and
                  Konstantinos Karampidis and
                  Jon Chamberlain and
                  Adrian F. Clark and
                  Antonio Campello},
  editor       = {Fabio Crestani and
                  Martin Braschler and
                  Jacques Savoy and
                  Andreas Rauber and
                  Henning M{\"{u}}ller and
                  David E. Losada and
                  Gundula Heinatz B{\"{u}}rki and
                  Linda Cappellato and
                  Nicola Ferro},
  title        = {ImageCLEF 2019: Multimedia Retrieval in Medicine, Lifelogging, Security
                  and Nature},
  booktitle    = {Experimental {IR} Meets Multilinguality, Multimodality, and Interaction
                  - 10th International Conference of the {CLEF} Association, {CLEF}
                  2019, Lugano, Switzerland, September 9-12, 2019, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {11696},
  pages        = {358--386},
  publisher    = {Springer},
  year         = {2019},
  url          = {https://doi.org/10.1007/978-3-030-28577-7\_28},
  doi          = {10.1007/978-3-030-28577-7\_28},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/clef/IonescuMPCLKKTA19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ecir/IonescuMPDPRTLG19,
  author       = {Bogdan Ionescu and
                  Henning M{\"{u}}ller and
                  Renaud P{\'{e}}teri and
                  Duc{-}Tien Dang{-}Nguyen and
                  Luca Piras and
                  Michael Riegler and
                  Minh{-}Triet Tran and
                  Mathias Lux and
                  Cathal Gurrin and
                  Yashin Dicente Cid and
                  Vitali Liauchuk and
                  Vassili Kovalev and
                  Asma Ben Abacha and
                  Sadid A. Hasan and
                  Vivek V. Datla and
                  Joey Liu and
                  Dina Demner{-}Fushman and
                  Obioma Pelka and
                  Christoph M. Friedrich and
                  Jon Chamberlain and
                  Adrian F. Clark and
                  Alba Garcia Seco de Herrera and
                  Narciso Garc{\'{\i}}a and
                  Ergina Kavallieratou and
                  Carlos Roberto del{-}Blanco and
                  Carlos Cuevas and
                  Nikos Vasilopoulos and
                  Konstantinos Karampidis},
  editor       = {Leif Azzopardi and
                  Benno Stein and
                  Norbert Fuhr and
                  Philipp Mayr and
                  Claudia Hauff and
                  Djoerd Hiemstra},
  title        = {ImageCLEF 2019: Multimedia Retrieval in Lifelogging, Medical, Nature,
                  and Security Applications},
  booktitle    = {Advances in Information Retrieval - 41st European Conference on {IR}
                  Research, {ECIR} 2019, Cologne, Germany, April 14-18, 2019, Proceedings,
                  Part {II}},
  series       = {Lecture Notes in Computer Science},
  volume       = {11438},
  pages        = {301--308},
  publisher    = {Springer},
  year         = {2019},
  url          = {https://doi.org/10.1007/978-3-030-15719-7\_40},
  doi          = {10.1007/978-3-030-15719-7\_40},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ecir/IonescuMPDPRTLG19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/AbachaMSGSD19,
  author       = {Asma Ben Abacha and
                  Yassine Mrabet and
                  Mark Sharp and
                  Travis R. Goodwin and
                  Sonya E. Shooshan and
                  Dina Demner{-}Fushman},
  editor       = {Lucila Ohno{-}Machado and
                  Brigitte S{\'{e}}roussi},
  title        = {Bridging the Gap Between Consumers' Medication Questions and Trusted
                  Answers},
  booktitle    = {{MEDINFO} 2019: Health and Wellbeing e-Networks for All - Proceedings
                  of the 17th World Congress on Medical and Health Informatics, Lyon,
                  France, 25-30 August 2019},
  series       = {Studies in Health Technology and Informatics},
  volume       = {264},
  pages        = {25--29},
  publisher    = {{IOS} Press},
  year         = {2019},
  url          = {https://doi.org/10.3233/SHTI190176},
  doi          = {10.3233/SHTI190176},
  timestamp    = {Wed, 03 Feb 2021 08:34:29 +0100},
  biburl       = {https://dblp.org/rec/conf/medinfo/AbachaMSGSD19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pkdd/RaeMD19,
  author       = {Alastair R. Rae and
                  James G. Mork and
                  Dina Demner{-}Fushman},
  editor       = {Peggy Cellier and
                  Kurt Driessens},
  title        = {Convolutional Neural Network for Automatic MeSH Indexing},
  booktitle    = {Machine Learning and Knowledge Discovery in Databases - International
                  Workshops of {ECML} {PKDD} 2019, W{\"{u}}rzburg, Germany, September
                  16-20, 2019, Proceedings, Part {II}},
  series       = {Communications in Computer and Information Science},
  volume       = {1168},
  pages        = {581--594},
  publisher    = {Springer},
  year         = {2019},
  url          = {https://doi.org/10.1007/978-3-030-43887-6\_53},
  doi          = {10.1007/978-3-030-43887-6\_53},
  timestamp    = {Tue, 31 Mar 2020 12:23:50 +0200},
  biburl       = {https://dblp.org/rec/conf/pkdd/RaeMD19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/trec/RobertsDVHBLPM19,
  author       = {Kirk Roberts and
                  Dina Demner{-}Fushman and
                  Ellen M. Voorhees and
                  William R. Hersh and
                  Steven Bedrick and
                  Alexander J. Lazar and
                  Shubham Pant and
                  Funda Meric{-}Bernstam},
  editor       = {Ellen M. Voorhees and
                  Angela Ellis},
  title        = {Overview of the {TREC} 2019 Precision Medicine Track},
  booktitle    = {Proceedings of the Twenty-Eighth Text REtrieval Conference, {TREC}
                  2019, Gaithersburg, Maryland, USA, November 13-15, 2019},
  series       = {{NIST} Special Publication},
  volume       = {1250},
  publisher    = {National Institute of Standards and Technology {(NIST)}},
  year         = {2019},
  url          = {https://trec.nist.gov/pubs/trec28/papers/OVERVIEW.PM.pdf},
  timestamp    = {Wed, 03 Feb 2021 08:31:24 +0100},
  biburl       = {https://dblp.org/rec/conf/trec/RobertsDVHBLPM19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bionlp/2019,
  editor       = {Dina Demner{-}Fushman and
                  Kevin Bretonnel Cohen and
                  Sophia Ananiadou and
                  Junichi Tsujii},
  title        = {Proceedings of the 18th BioNLP Workshop and Shared Task, BioNLP@ACL
                  2019, Florence, Italy, August 1, 2019},
  publisher    = {Association for Computational Linguistics},
  year         = {2019},
  url          = {https://aclanthology.org/volumes/W19-50/},
  isbn         = {978-1-950737-28-4},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/2019.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/nips/MrabetD19,
  author       = {Yassine Mrabet and
                  Dina Demner{-}Fushman},
  title        = {On Agreements in Visual Understanding},
  booktitle    = {Visually Grounded Interaction and Language (ViGIL), NeurIPS 2019 Workshop,
                  Vancouver, Canada, December 13, 2019},
  year         = {2019},
  url          = {https://vigilworkshop.github.io/static/papers/45.pdf},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/nips/MrabetD19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/tac/GoodwinDFD19,
  author       = {Travis R. Goodwin and
                  Dina Demner{-}Fushman and
                  Kin Wah Fung and
                  Phong Do},
  title        = {Overview of the {TAC} 2019 Track on Drug-Drug Interaction Extraction
                  from Drug Labels},
  booktitle    = {Proceedings of the 2019 Text Analysis Conference, {TAC} 2019, Gaithersburg,
                  Maryland, USA, November 12-13, 2019},
  publisher    = {{NIST}},
  year         = {2019},
  url          = {https://tac.nist.gov/publications/2019/additional.papers/TAC2019.DDI.overview.proceedings.pdf},
  timestamp    = {Mon, 19 Apr 2021 12:42:35 +0200},
  biburl       = {https://dblp.org/rec/conf/tac/GoodwinDFD19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1901-08079,
  author       = {Asma Ben Abacha and
                  Dina Demner{-}Fushman},
  title        = {A Question-Entailment Approach to Question Answering},
  journal      = {CoRR},
  volume       = {abs/1901.08079},
  year         = {2019},
  url          = {http://arxiv.org/abs/1901.08079},
  eprinttype    = {arXiv},
  eprint       = {1901.08079},
  timestamp    = {Sat, 02 Feb 2019 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1901-08079.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1908-04485,
  author       = {Surabhi Datta and
                  Yuqi Si and
                  Laritza Rodriguez and
                  Sonya E. Shooshan and
                  Dina Demner{-}Fushman and
                  Kirk Roberts},
  title        = {Understanding Spatial Language in Radiology: Representation Framework,
                  Annotation, and Spatial Relation Extraction from Chest X-ray Reports
                  using Deep Learning},
  journal      = {CoRR},
  volume       = {abs/1908.04485},
  year         = {2019},
  url          = {http://arxiv.org/abs/1908.04485},
  eprinttype    = {arXiv},
  eprint       = {1908.04485},
  timestamp    = {Mon, 19 Aug 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1908-04485.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1910-07429,
  author       = {Travis R. Goodwin and
                  Dina Demner{-}Fushman},
  title        = {Bridging the Knowledge Gap: Enhancing Question Answering with World
                  and Domain Knowledge},
  journal      = {CoRR},
  volume       = {abs/1910.07429},
  year         = {2019},
  url          = {http://arxiv.org/abs/1910.07429},
  eprinttype    = {arXiv},
  eprint       = {1910.07429},
  timestamp    = {Tue, 22 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1910-07429.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KilicogluAMSRMD18,
  author       = {Halil Kilicoglu and
                  Asma Ben Abacha and
                  Yassine Mrabet and
                  Sonya E. Shooshan and
                  Laritza Rodriguez and
                  Kate Masterton and
                  Dina Demner{-}Fushman},
  title        = {Semantic annotation of consumer health questions},
  journal      = {{BMC} Bioinform.},
  volume       = {19},
  number       = {1},
  pages        = {34:1--34:28},
  year         = {2018},
  url          = {https://doi.org/10.1186/s12859-018-2045-1},
  doi          = {10.1186/S12859-018-2045-1},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/KilicogluAMSRMD18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/Demner-FushmanM18,
  author       = {Dina Demner{-}Fushman and
                  James G. Mork and
                  Willie J. Rogers and
                  Sonya E. Shooshan and
                  Laritza M. Rodriguez and
                  Alan R. Aronson},
  title        = {Finding medication doses in the literature},
  booktitle    = {{AMIA} 2018, American Medical Informatics Association Annual Symposium,
                  San Francisco, CA, November 3-7, 2018},
  publisher    = {{AMIA}},
  year         = {2018},
  url          = {https://knowledge.amia.org/67852-amia-1.4259402/t004-1.4263758/t004-1.4263759/2976120-1.4264018/2975720-1.4264015},
  timestamp    = {Wed, 04 Aug 2021 11:13:05 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/Demner-FushmanM18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/Demner-FushmanT18,
  author       = {Dina Demner{-}Fushman and
                  Joseph M. Tonning and
                  Kin Wah Fung and
                  Phong Do and
                  Richard D. Boyce and
                  Kirk Roberts},
  title        = {Adverse Reactions and Drug-Drug Interaction Extraction tracks at the
                  Text Analysis Conference {(TAC)}},
  booktitle    = {{AMIA} 2018, American Medical Informatics Association Annual Symposium,
                  San Francisco, CA, November 3-7, 2018},
  publisher    = {{AMIA}},
  year         = {2018},
  url          = {https://knowledge.amia.org/67852-amia-1.4259402/t006-1.4263223/t006-1.4263224/2977233-1.4263537/2975809-1.4263534},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/Demner-FushmanT18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/LangMDA18,
  author       = {Fran{\c{c}}ois{-}Michel Lang and
                  James G. Mork and
                  Dina Demner{-}Fushman and
                  Alan R. Aronson},
  title        = {Increasing {UMLS} Coverage and Reducing Ambiguity via Automated Creation
                  of Synonymous Terms},
  booktitle    = {{AMIA} 2018, American Medical Informatics Association Annual Symposium,
                  San Francisco, CA, November 3-7, 2018},
  publisher    = {{AMIA}},
  year         = {2018},
  url          = {https://knowledge.amia.org/67852-amia-1.4259402/t007-1.4262189/t007-1.4262190/2977336-1.4262752/2974790-1.4262749},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/LangMDA18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/LuD18,
  author       = {Chris J. Lu and
                  Dina Demner{-}Fushman},
  title        = {Improving Spelling Correction with Consumer Health Terminology},
  booktitle    = {{AMIA} 2018, American Medical Informatics Association Annual Symposium,
                  San Francisco, CA, November 3-7, 2018},
  publisher    = {{AMIA}},
  year         = {2018},
  url          = {https://knowledge.amia.org/67852-amia-1.4259402/t007-1.4262189/t007-1.4262190/2975771-1.4262704/2970937-1.4262701},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/LuD18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RobertsDVHBLP18,
  author       = {Kirk Roberts and
                  Dina Demner{-}Fushman and
                  Ellen M. Voorhees and
                  William R. Hersh and
                  Steven Bedrick and
                  Alexander J. Lazar and
                  Shubham Pant},
  title        = {Benchmarking Information Retrieval for Precision Oncology: the {TREC}
                  Precision Medicine Track},
  booktitle    = {{AMIA} 2018, American Medical Informatics Association Annual Symposium,
                  San Francisco, CA, November 3-7, 2018},
  publisher    = {{AMIA}},
  year         = {2018},
  url          = {https://knowledge.amia.org/67852-amia-1.4259402/t006-1.4263223/t006-1.4263224/2976780-1.4263306/2970178-1.4263303},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/RobertsDVHBLP18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/clef/AbachaGLRD18,
  author       = {Asma Ben Abacha and
                  Soumya Gayen and
                  Jason J. Lau and
                  Sivaramakrishnan Rajaraman and
                  Dina Demner{-}Fushman},
  editor       = {Linda Cappellato and
                  Nicola Ferro and
                  Jian{-}Yun Nie and
                  Laure Soulier},
  title        = {{NLM} at ImageCLEF 2018 Visual Question Answering in the Medical Domain},
  booktitle    = {Working Notes of {CLEF} 2018 - Conference and Labs of the Evaluation
                  Forum, Avignon, France, September 10-14, 2018},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {2125},
  publisher    = {CEUR-WS.org},
  year         = {2018},
  url          = {https://ceur-ws.org/Vol-2125/paper\_165.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:36 +0100},
  biburl       = {https://dblp.org/rec/conf/clef/AbachaGLRD18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/simbig/Demner-Fushman18,
  author       = {Dina Demner{-}Fushman},
  editor       = {Juan Antonio Lossio{-}Ventura and
                  Denisse Mu{\~{n}}ante and
                  Hugo Alatrista{-}Salas},
  title        = {Clinical, Consumer Health, and Visual Question Answering},
  booktitle    = {Information Management and Big Data, 5th International Conference,
                  SIMBig 2018, Lima, Peru, September 3-5, 2018, Proceedings},
  series       = {Communications in Computer and Information Science},
  volume       = {898},
  pages        = {1--6},
  publisher    = {Springer},
  year         = {2018},
  url          = {https://doi.org/10.1007/978-3-030-11680-4\_1},
  doi          = {10.1007/978-3-030-11680-4\_1},
  timestamp    = {Mon, 15 Jun 2020 17:12:30 +0200},
  biburl       = {https://dblp.org/rec/conf/simbig/Demner-Fushman18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/trec/RobertsDVHBL18,
  author       = {Kirk Roberts and
                  Dina Demner{-}Fushman and
                  Ellen M. Voorhees and
                  William R. Hersh and
                  Steven Bedrick and
                  Alexander J. Lazar},
  editor       = {Ellen M. Voorhees and
                  Angela Ellis},
  title        = {Overview of the {TREC} 2018 Precision Medicine Track},
  booktitle    = {Proceedings of the Twenty-Seventh Text REtrieval Conference, {TREC}
                  2018, Gaithersburg, Maryland, USA, November 14-16, 2018},
  series       = {{NIST} Special Publication},
  volume       = {500-331},
  publisher    = {National Institute of Standards and Technology {(NIST)}},
  year         = {2018},
  url          = {https://trec.nist.gov/pubs/trec27/papers/Overview-PM.pdf},
  timestamp    = {Wed, 03 Feb 2021 08:31:25 +0100},
  biburl       = {https://dblp.org/rec/conf/trec/RobertsDVHBL18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bionlp/2018,
  editor       = {Dina Demner{-}Fushman and
                  Kevin Bretonnel Cohen and
                  Sophia Ananiadou and
                  Junichi Tsujii},
  title        = {Proceedings of the BioNLP 2018 workshop, Melbourne, Australia, July
                  19, 2018},
  publisher    = {Association for Computational Linguistics},
  year         = {2018},
  url          = {https://aclanthology.org/volumes/W18-23/},
  isbn         = {978-1-948087-33-9},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/2018.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/tac/Demner-FushmanF18,
  author       = {Dina Demner{-}Fushman and
                  Kin Wah Fung and
                  Phong Do and
                  Richard D. Boyce and
                  Travis R. Goodwin},
  title        = {Overview of the {TAC} 2018 Drug-Drug Interaction Extraction from Drug
                  Labels Track},
  booktitle    = {Proceedings of the 2018 Text Analysis Conference, {TAC} 2018, Gaithersburg,
                  Maryland, USA, November 13-14, 2018},
  publisher    = {{NIST}},
  year         = {2018},
  url          = {https://tac.nist.gov/publications/2018/additional.papers/TAC2018.DDI.overview.proceedings.pdf},
  timestamp    = {Mon, 19 Apr 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/tac/Demner-FushmanF18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/CohenRGCPAHDOX17,
  author       = {Trevor Cohen and
                  Kirk Roberts and
                  Anupama E. Gururaj and
                  Xiaoling Chen and
                  Saeid Pournejati and
                  George Alter and
                  William R. Hersh and
                  Dina Demner{-}Fushman and
                  Lucila Ohno{-}Machado and
                  Hua Xu},
  title        = {A publicly available benchmark for biomedical dataset retrieval: the
                  reference standard for the 2016 bioCADDIE dataset retrieval challenge},
  journal      = {Database J. Biol. Databases Curation},
  volume       = {2017},
  pages        = {bax061},
  year         = {2017},
  url          = {https://doi.org/10.1093/database/bax061},
  doi          = {10.1093/DATABASE/BAX061},
  timestamp    = {Thu, 13 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biodb/CohenRGCPAHDOX17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/RobertsGCPHDOCX17,
  author       = {Kirk Roberts and
                  Anupama E. Gururaj and
                  Xiaoling Chen and
                  Saeid Pournejati and
                  William R. Hersh and
                  Dina Demner{-}Fushman and
                  Lucila Ohno{-}Machado and
                  Trevor Cohen and
                  Hua Xu},
  title        = {Information retrieval for biomedical datasets: the 2016 bioCADDIE
                  dataset retrieval challenge},
  journal      = {Database J. Biol. Databases Curation},
  volume       = {2017},
  pages        = {bax068},
  year         = {2017},
  url          = {https://doi.org/10.1093/database/bax068},
  doi          = {10.1093/DATABASE/BAX068},
  timestamp    = {Thu, 13 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biodb/RobertsGCPHDOCX17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biomedsem/MorkAD17,
  author       = {James G. Mork and
                  Alan R. Aronson and
                  Dina Demner{-}Fushman},
  title        = {12 years on - Is the {NLM} medical text indexer still useful and relevant?},
  journal      = {J. Biomed. Semant.},
  volume       = {8},
  number       = {1},
  pages        = {8:1--8:10},
  year         = {2017},
  url          = {https://doi.org/10.1186/s13326-017-0113-5},
  doi          = {10.1186/S13326-017-0113-5},
  timestamp    = {Thu, 13 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/biomedsem/MorkAD17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/ZhangD17,
  author       = {Kevin Zhang and
                  Dina Demner{-}Fushman},
  title        = {Automated classification of eligibility criteria in clinical trials
                  to facilitate patient-trial matching for specific patient populations},
  journal      = {J. Am. Medical Informatics Assoc.},
  volume       = {24},
  number       = {4},
  pages        = {781--787},
  year         = {2017},
  url          = {https://doi.org/10.1093/jamia/ocw176},
  doi          = {10.1093/JAMIA/OCW176},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jamia/ZhangD17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/Demner-FushmanR17,
  author       = {Dina Demner{-}Fushman and
                  Willie J. Rogers and
                  Alan R. Aronson},
  title        = {MetaMap Lite: an evaluation of a new Java implementation of MetaMap},
  journal      = {J. Am. Medical Informatics Assoc.},
  volume       = {24},
  number       = {4},
  pages        = {841--844},
  year         = {2017},
  url          = {https://doi.org/10.1093/jamia/ocw177},
  doi          = {10.1093/JAMIA/OCW177},
  timestamp    = {Mon, 11 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jamia/Demner-FushmanR17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jasis/DeardorffMRKD17,
  author       = {Ariel Deardorff and
                  Kate Masterton and
                  Kirk Roberts and
                  Halil Kilicoglu and
                  Dina Demner{-}Fushman},
  title        = {A protocol-driven approach to automatically finding authoritative
                  answers to consumer health questions in online resources},
  journal      = {J. Assoc. Inf. Sci. Technol.},
  volume       = {68},
  number       = {7},
  pages        = {1724--1736},
  year         = {2017},
  url          = {https://doi.org/10.1002/asi.23806},
  doi          = {10.1002/ASI.23806},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jasis/DeardorffMRKD17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/acl/MrabetKD17,
  author       = {Yassine Mrabet and
                  Halil Kilicoglu and
                  Dina Demner{-}Fushman},
  editor       = {Regina Barzilay and
                  Min{-}Yen Kan},
  title        = {TextFlow: {A} Text Similarity Measure based on Continuous Sequences},
  booktitle    = {Proceedings of the 55th Annual Meeting of the Association for Computational
                  Linguistics, {ACL} 2017, Vancouver, Canada, July 30 - August 4, Volume
                  1: Long Papers},
  pages        = {763--772},
  publisher    = {Association for Computational Linguistics},
  year         = {2017},
  url          = {https://doi.org/10.18653/v1/P17-1071},
  doi          = {10.18653/V1/P17-1071},
  timestamp    = {Fri, 06 Aug 2021 00:40:58 +0200},
  biburl       = {https://dblp.org/rec/conf/acl/MrabetKD17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/Demner-FushmanR17,
  author       = {Dina Demner{-}Fushman and
                  Willie J. Rogers},
  title        = {{CTB:} {A} Custom Taxonomy Builder for Named Entity Extraction},
  booktitle    = {{AMIA} 2017, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 4-8, 2017},
  publisher    = {{AMIA}},
  year         = {2017},
  url          = {https://knowledge.amia.org/65881-amiab-1.4254737/t004-1.4257399/f004-1.4257400/2730480-1.4258192/2731279-1.4258189},
  timestamp    = {Wed, 04 Aug 2021 10:23:11 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/Demner-FushmanR17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/EdingerDCBH17,
  author       = {Tracy Edinger and
                  Dina Demner{-}Fushman and
                  Aaron M. Cohen and
                  Steven Bedrick and
                  William R. Hersh},
  title        = {Evaluation of Clinical Text Segmentation to Facilitate Cohort Retrieval},
  booktitle    = {{AMIA} 2017, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 4-8, 2017},
  publisher    = {{AMIA}},
  year         = {2017},
  url          = {https://knowledge.amia.org/65881-amiab-1.4254737/t003-1.4258387/f003-1.4258388/2730257-1.4258794/2732103-1.4258791},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/EdingerDCBH17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/LangD17,
  author       = {Fran{\c{c}}ois{-}Michel Lang and
                  Dina Demner{-}Fushman},
  title        = {New MetaMap Features for Processing Numerical Tables},
  booktitle    = {{AMIA} 2017, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 4-8, 2017},
  publisher    = {{AMIA}},
  year         = {2017},
  url          = {https://knowledge.amia.org/65881-amiab-1.4254737/t004-1.4257399/f004-1.4257400/2727856-1.4257935/2728685-1.4257932},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/LangD17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RobertsGCPCHDOX17,
  author       = {Kirk Roberts and
                  Anupama E. Gururaj and
                  Xiaoling Chen and
                  Saeid Pournejati and
                  Trevor Cohen and
                  William R. Hersh and
                  Dina Demner{-}Fushman and
                  Lucila Ohno{-}Machado and
                  Hua Xu},
  title        = {Information Retrieval for Biomedical Datasets: The 2016 bioCADDIE
                  Challenge},
  booktitle    = {{AMIA} 2017, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 4-8, 2017},
  publisher    = {{AMIA}},
  year         = {2017},
  url          = {https://knowledge.amia.org/65881-amiab-1.4254737/t001-1.4259018/f001-1.4259019/2725954-1.4259134/2731579-1.4259131},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/RobertsGCPCHDOX17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RodriguezMGD17,
  author       = {Laritza M. Rodriguez and
                  Stephanie M. Morrison and
                  Kathleen Greenberg and
                  Dina Demner{-}Fushman},
  title        = {Mining the literature for genes associated with placenta-mediated
                  maternal diseases},
  booktitle    = {{AMIA} 2017, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 4-8, 2017},
  publisher    = {{AMIA}},
  year         = {2017},
  url          = {https://knowledge.amia.org/65881-amiab-1.4254737/t003-1.4258387/f003-1.4258388/2730827-1.4258530/2730340-1.4258527},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/RodriguezMGD17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/AbachaHWLAD17,
  author       = {Asma Ben Abacha and
                  Alba Garcia Seco de Herrera and
                  Ke Wang and
                  L. Rodney Long and
                  Sameer K. Antani and
                  Dina Demner{-}Fushman},
  editor       = {Xiaohua Hu and
                  Chi{-}Ren Shyu and
                  Yana Bromberg and
                  Jean Gao and
                  Yang Gong and
                  Dmitry Korkin and
                  Illhoi Yoo and
                  Huiru Jane Zheng},
  title        = {Named entity recognition in functional neuroimaging literature},
  booktitle    = {2017 {IEEE} International Conference on Bioinformatics and Biomedicine,
                  {BIBM} 2017, Kansas City, MO, USA, November 13-16, 2017},
  pages        = {2218--2220},
  publisher    = {{IEEE} Computer Society},
  year         = {2017},
  url          = {https://doi.org/10.1109/BIBM.2017.8218002},
  doi          = {10.1109/BIBM.2017.8218002},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bibm/AbachaHWLAD17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/clef/AbachaHGDA17,
  author       = {Asma Ben Abacha and
                  Alba Garcia Seco de Herrera and
                  Soumya Gayen and
                  Dina Demner{-}Fushman and
                  Sameer K. Antani},
  editor       = {Linda Cappellato and
                  Nicola Ferro and
                  Lorraine Goeuriot and
                  Thomas Mandl},
  title        = {{NLM} at ImageCLEF 2017 Caption Task},
  booktitle    = {Working Notes of {CLEF} 2017 - Conference and Labs of the Evaluation
                  Forum, Dublin, Ireland, September 11-14, 2017},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1866},
  publisher    = {CEUR-WS.org},
  year         = {2017},
  url          = {https://ceur-ws.org/Vol-1866/paper\_158.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:41 +0100},
  biburl       = {https://dblp.org/rec/conf/clef/AbachaHGDA17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semeval/AbachaD17,
  author       = {Asma Ben Abacha and
                  Dina Demner{-}Fushman},
  editor       = {Steven Bethard and
                  Marine Carpuat and
                  Marianna Apidianaki and
                  Saif M. Mohammad and
                  Daniel M. Cer and
                  David Jurgens},
  title        = {NLM{\_}NIH at SemEval-2017 Task 3: from Question Entailment to Question
                  Similarity for Community Question Answering},
  booktitle    = {Proceedings of the 11th International Workshop on Semantic Evaluation,
                  SemEval@ACL 2017, Vancouver, Canada, August 3-4, 2017},
  pages        = {349--352},
  publisher    = {Association for Computational Linguistics},
  year         = {2017},
  url          = {https://doi.org/10.18653/v1/S17-2057},
  doi          = {10.18653/V1/S17-2057},
  timestamp    = {Fri, 06 Aug 2021 00:39:34 +0200},
  biburl       = {https://dblp.org/rec/conf/semeval/AbachaD17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/trec/AbachaAPD17,
  author       = {Asma Ben Abacha and
                  Eugene Agichtein and
                  Yuval Pinter and
                  Dina Demner{-}Fushman},
  editor       = {Ellen M. Voorhees and
                  Angela Ellis},
  title        = {Overview of the Medical Question Answering Task at {TREC} 2017 LiveQA},
  booktitle    = {Proceedings of The Twenty-Sixth Text REtrieval Conference, {TREC}
                  2017, Gaithersburg, Maryland, USA, November 15-17, 2017},
  series       = {{NIST} Special Publication},
  volume       = {500-324},
  publisher    = {National Institute of Standards and Technology {(NIST)}},
  year         = {2017},
  url          = {https://trec.nist.gov/pubs/trec26/papers/Overview-QA.pdf},
  timestamp    = {Wed, 07 Jul 2021 16:44:22 +0200},
  biburl       = {https://dblp.org/rec/conf/trec/AbachaAPD17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/trec/RobertsDVHBLP17,
  author       = {Kirk Roberts and
                  Dina Demner{-}Fushman and
                  Ellen M. Voorhees and
                  William R. Hersh and
                  Steven Bedrick and
                  Alexander J. Lazar and
                  Shubham Pant},
  editor       = {Ellen M. Voorhees and
                  Angela Ellis},
  title        = {Overview of the {TREC} 2017 Precision Medicine Track},
  booktitle    = {Proceedings of The Twenty-Sixth Text REtrieval Conference, {TREC}
                  2017, Gaithersburg, Maryland, USA, November 15-17, 2017},
  series       = {{NIST} Special Publication},
  volume       = {500-324},
  publisher    = {National Institute of Standards and Technology {(NIST)}},
  year         = {2017},
  url          = {https://trec.nist.gov/pubs/trec26/papers/Overview-PM.pdf},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/trec/RobertsDVHBLP17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bionlp/2017,
  editor       = {Kevin Bretonnel Cohen and
                  Dina Demner{-}Fushman and
                  Sophia Ananiadou and
                  Junichi Tsujii},
  title        = {BioNLP 2017, Vancouver, Canada, August 4, 2017},
  publisher    = {Association for Computational Linguistics},
  year         = {2017},
  url          = {https://aclanthology.org/volumes/W17-23/},
  doi          = {10.18653/V1/W17-23},
  isbn         = {978-1-945626-59-3},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/2017.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/tac/RobertsDT17,
  author       = {Kirk Roberts and
                  Dina Demner{-}Fushman and
                  Joseph M. Tonning},
  title        = {Overview of the {TAC} 2017 Adverse Reaction Extraction from Drug Labels
                  Track},
  booktitle    = {Proceedings of the 2017 Text Analysis Conference, {TAC} 2017, Gaithersburg,
                  Maryland, USA, November 13-14, 2017},
  publisher    = {{NIST}},
  year         = {2017},
  url          = {https://tac.nist.gov/publications/2017/additional.papers/TAC2017.ADR\_overview.proceedings.pdf},
  timestamp    = {Tue, 20 Aug 2019 13:25:18 +0200},
  biburl       = {https://dblp.org/rec/conf/tac/RobertsDT17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijcla/AbachaD16,
  author       = {Asma Ben Abacha and
                  Dina Demner{-}Fushman},
  title        = {Meta-Learning with Selective Data Augmentation for Medical Entity
                  Recognition},
  journal      = {Int. J. Comput. Linguistics Appl.},
  volume       = {7},
  number       = {2},
  pages        = {167--182},
  year         = {2016},
  url          = {http://www.ijcla.bahripublications.com/2016-2/IJCLA-2016-2-pp-167-182-preprint.pdf},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijcla/AbachaD16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ir/RobertsSDVH16,
  author       = {Kirk Roberts and
                  Matthew S. Simpson and
                  Dina Demner{-}Fushman and
                  Ellen M. Voorhees and
                  William R. Hersh},
  title        = {State-of-the-art in biomedical literature retrieval for clinical cases:
                  a survey of the {TREC} 2014 {CDS} track},
  journal      = {Inf. Retr. J.},
  volume       = {19},
  number       = {1-2},
  pages        = {113--148},
  year         = {2016},
  url          = {https://doi.org/10.1007/s10791-015-9259-x},
  doi          = {10.1007/S10791-015-9259-X},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ir/RobertsSDVH16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/Demner-FushmanK16,
  author       = {Dina Demner{-}Fushman and
                  Marc D. Kohli and
                  Marc B. Rosenman and
                  Sonya E. Shooshan and
                  Laritza Rodriguez and
                  Sameer K. Antani and
                  George R. Thoma and
                  Clement J. McDonald},
  title        = {Preparing a collection of radiology examinations for distribution
                  and retrieval},
  journal      = {J. Am. Medical Informatics Assoc.},
  volume       = {23},
  number       = {2},
  pages        = {304--310},
  year         = {2016},
  url          = {https://doi.org/10.1093/jamia/ocv080},
  doi          = {10.1093/JAMIA/OCV080},
  timestamp    = {Mon, 11 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jamia/Demner-FushmanK16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/RobertsD16,
  author       = {Kirk Roberts and
                  Dina Demner{-}Fushman},
  title        = {Interactive use of online health resources: a comparison of consumer
                  and professional questions},
  journal      = {J. Am. Medical Informatics Assoc.},
  volume       = {23},
  number       = {4},
  pages        = {802--811},
  year         = {2016},
  url          = {https://doi.org/10.1093/jamia/ocw024},
  doi          = {10.1093/JAMIA/OCW024},
  timestamp    = {Mon, 11 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jamia/RobertsD16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/acl-workshops/MrabetVKGDHS16,
  author       = {Yassine Mrabet and
                  Pavlos Vougiouklis and
                  Halil Kilicoglu and
                  Claire Gardent and
                  Dina Demner{-}Fushman and
                  Jonathon S. Hare and
                  Elena Simperl},
  editor       = {Claire Gardent and
                  Aldo Gangemi},
  title        = {Aligning Texts and Knowledge Bases with Semantic Sentence Simplification},
  booktitle    = {Proceedings of the 2nd International Workshop on Natural Language
                  Generation and the Semantic Web, WebNLG 2016, Edinburgh, UK, September
                  6, 2016},
  pages        = {29--36},
  publisher    = {Association for Computational Linguistics},
  year         = {2016},
  url          = {https://doi.org/10.18653/v1/w16-3506},
  doi          = {10.18653/V1/W16-3506},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/acl-workshops/MrabetVKGDHS16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/AbachaD16,
  author       = {Asma Ben Abacha and
                  Dina Demner{-}Fushman},
  title        = {Recognizing Question Entailment for Medical Question Answering},
  booktitle    = {{AMIA} 2016, American Medical Informatics Association Annual Symposium,
                  Chicago, IL, USA, November 12-16, 2016},
  publisher    = {{AMIA}},
  year         = {2016},
  url          = {https://knowledge.amia.org/amia-63300-1.3360278/t004-1.3364525/f004-1.3364526/2499645-1.3365016/2499767-1.3365011},
  timestamp    = {Wed, 04 Aug 2021 11:13:11 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/AbachaD16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/MeystreLXAWPSWZ16,
  author       = {St{\'{e}}phane M. Meystre and
                  Hongfang Liu and
                  Rong Xu and
                  Sivaram Arabandi and
                  Kavishwar B. Wagholikar and
                  Jon Patrick and
                  Guergana K. Savova and
                  Chunhua Weng and
                  Pierre Zweigenbaum and
                  Dina Demner{-}Fushman and
                  {\"{O}}zlem Uzuner and
                  Hua Xu},
  title        = {Natural Language Processing Working Group Pre-Symposium: Graduate
                  Student Consortium and 'Hackathon'},
  booktitle    = {{AMIA} 2016, American Medical Informatics Association Annual Symposium,
                  Chicago, IL, USA, November 12-16, 2016},
  publisher    = {{AMIA}},
  year         = {2016},
  url          = {https://knowledge.amia.org/amia-63300-1.3360278/t009-1.3369175/f009-1.3369176/2499034-1.3369215/2499356-1.3369212},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/MeystreLXAWPSWZ16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/MorkD16,
  author       = {James G. Mork and
                  Dina Demner{-}Fushman},
  title        = {Resolving Hierarchical Ambiguity in Indexing Recommendations},
  booktitle    = {{AMIA} 2016, American Medical Informatics Association Annual Symposium,
                  Chicago, IL, USA, November 12-16, 2016},
  publisher    = {{AMIA}},
  year         = {2016},
  url          = {https://knowledge.amia.org/amia-63300-1.3360278/t005-1.3362920/f005-1.3362921/2498998-1.3363560/2496014-1.3363555},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/MorkD16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/MrabetKRD16,
  author       = {Yassine Mrabet and
                  Halil Kilicoglu and
                  Kirk Roberts and
                  Dina Demner{-}Fushman},
  title        = {Combining Open-domain and Biomedical Knowledge for Topic Recognition
                  in Consumer Health Questions},
  booktitle    = {{AMIA} 2016, American Medical Informatics Association Annual Symposium,
                  Chicago, IL, USA, November 12-16, 2016},
  publisher    = {{AMIA}},
  year         = {2016},
  url          = {https://knowledge.amia.org/amia-63300-1.3360278/t004-1.3364525/f004-1.3364526/2496813-1.3364718/2499657-1.3364713},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/MrabetKRD16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RobertsRSD16,
  author       = {Kirk Roberts and
                  Laritza M. Rodriguez and
                  Sonya E. Shooshan and
                  Dina Demner{-}Fushman},
  title        = {Resource Classification for Medical Questions},
  booktitle    = {{AMIA} 2016, American Medical Informatics Association Annual Symposium,
                  Chicago, IL, USA, November 12-16, 2016},
  publisher    = {{AMIA}},
  year         = {2016},
  url          = {https://knowledge.amia.org/amia-63300-1.3360278/t004-1.3364525/f004-1.3364526/2498949-1.3364657/2499725-1.3364654},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/RobertsRSD16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RodriguezMGD16,
  author       = {Laritza M. Rodriguez and
                  Stephanie M. Morrison and
                  Kathleen Greenberg and
                  Dina Demner{-}Fushman},
  title        = {Towards automatic discovery of Genes related to Human Placenta},
  booktitle    = {{AMIA} 2016, American Medical Informatics Association Annual Symposium,
                  Chicago, IL, USA, November 12-16, 2016},
  publisher    = {{AMIA}},
  year         = {2016},
  url          = {https://knowledge.amia.org/amia-63300-1.3360278/t005-1.3362920/f005-1.3362921/2499924-1.3363310/2497854-1.3363305},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/RodriguezMGD16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cbms/XueRALDT16,
  author       = {Zhiyun Xue and
                  Md. Mahmudur Rahman and
                  Sameer K. Antani and
                  L. Rodney Long and
                  Dina Demner{-}Fushman and
                  George R. Thoma},
  title        = {Modality Classification for Searching Figures in Biomedical Literature},
  booktitle    = {29th {IEEE} International Symposium on Computer-Based Medical Systems,
                  {CBMS} 2016, Belfast, {UK} and Dublin, Ireland, June 20-24, 2016},
  pages        = {152--157},
  publisher    = {{IEEE} Computer Society},
  year         = {2016},
  url          = {https://doi.org/10.1109/CBMS.2016.29},
  doi          = {10.1109/CBMS.2016.29},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/cbms/XueRALDT16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/coling/ChachraASRD16,
  author       = {Suchet K. Chachra and
                  Asma Ben Abacha and
                  Sonya E. Shooshan and
                  Laritza Rodriguez and
                  Dina Demner{-}Fushman},
  editor       = {Nicoletta Calzolari and
                  Yuji Matsumoto and
                  Rashmi Prasad},
  title        = {A Hybrid Approach to Generation of Missing Abstracts in Biomedical
                  Literature},
  booktitle    = {{COLING} 2016, 26th International Conference on Computational Linguistics,
                  Proceedings of the Conference: Technical Papers, December 11-16, 2016,
                  Osaka, Japan},
  pages        = {1093--1100},
  publisher    = {{ACL}},
  year         = {2016},
  url          = {https://aclanthology.org/C16-1104/},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/coling/ChachraASRD16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cvpr/ShinRLDYS16,
  author       = {Hoo{-}Chang Shin and
                  Kirk Roberts and
                  Le Lu and
                  Dina Demner{-}Fushman and
                  Jianhua Yao and
                  Ronald M. Summers},
  title        = {Learning to Read Chest X-Rays: Recurrent Neural Cascade Model for
                  Automated Image Annotation},
  booktitle    = {2016 {IEEE} Conference on Computer Vision and Pattern Recognition,
                  {CVPR} 2016, Las Vegas, NV, USA, June 27-30, 2016},
  pages        = {2497--2506},
  publisher    = {{IEEE} Computer Society},
  year         = {2016},
  url          = {https://doi.org/10.1109/CVPR.2016.274},
  doi          = {10.1109/CVPR.2016.274},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/cvpr/ShinRLDYS16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ecai/MrabetKD16,
  author       = {Yassine Mrabet and
                  Halil Kilicoglu and
                  Dina Demner{-}Fushman},
  editor       = {Gal A. Kaminka and
                  Maria Fox and
                  Paolo Bouquet and
                  Eyke H{\"{u}}llermeier and
                  Virginia Dignum and
                  Frank Dignum and
                  Frank van Harmelen},
  title        = {Unsupervised Ranking of Knowledge Bases for Named Entity Recognition},
  booktitle    = {{ECAI} 2016 - 22nd European Conference on Artificial Intelligence,
                  29 August-2 September 2016, The Hague, The Netherlands - Including
                  Prestigious Applications of Artificial Intelligence {(PAIS} 2016)},
  series       = {Frontiers in Artificial Intelligence and Applications},
  volume       = {285},
  pages        = {1248--1255},
  publisher    = {{IOS} Press},
  year         = {2016},
  url          = {https://doi.org/10.3233/978-1-61499-672-9-1248},
  doi          = {10.3233/978-1-61499-672-9-1248},
  timestamp    = {Tue, 02 Nov 2021 15:59:05 +0100},
  biburl       = {https://dblp.org/rec/conf/ecai/MrabetKD16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/lrec/KilicogluAMRRSD16,
  author       = {Halil Kilicoglu and
                  Asma Ben Abacha and
                  Yassine Mrabet and
                  Kirk Roberts and
                  Laritza Rodriguez and
                  Sonya E. Shooshan and
                  Dina Demner{-}Fushman},
  editor       = {Nicoletta Calzolari and
                  Khalid Choukri and
                  Thierry Declerck and
                  Sara Goggi and
                  Marko Grobelnik and
                  Bente Maegaard and
                  Joseph Mariani and
                  H{\'{e}}l{\`{e}}ne Mazo and
                  Asunci{\'{o}}n Moreno and
                  Jan Odijk and
                  Stelios Piperidis},
  title        = {Annotating Named Entities in Consumer Health Questions},
  booktitle    = {Proceedings of the Tenth International Conference on Language Resources
                  and Evaluation {LREC} 2016, Portoro{\v{z}}, Slovenia, May 23-28, 2016},
  publisher    = {European Language Resources Association {(ELRA)}},
  year         = {2016},
  url          = {http://www.lrec-conf.org/proceedings/lrec2016/summaries/727.html},
  timestamp    = {Mon, 19 Aug 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/lrec/KilicogluAMRRSD16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/lrec/RobertsD16,
  author       = {Kirk Roberts and
                  Dina Demner{-}Fushman},
  editor       = {Nicoletta Calzolari and
                  Khalid Choukri and
                  Thierry Declerck and
                  Sara Goggi and
                  Marko Grobelnik and
                  Bente Maegaard and
                  Joseph Mariani and
                  H{\'{e}}l{\`{e}}ne Mazo and
                  Asunci{\'{o}}n Moreno and
                  Jan Odijk and
                  Stelios Piperidis},
  title        = {Annotating Logical Forms for {EHR} Questions},
  booktitle    = {Proceedings of the Tenth International Conference on Language Resources
                  and Evaluation {LREC} 2016, Portoro{\v{z}}, Slovenia, May 23-28, 2016},
  publisher    = {European Language Resources Association {(ELRA)}},
  year         = {2016},
  url          = {http://www.lrec-conf.org/proceedings/lrec2016/summaries/152.html},
  timestamp    = {Mon, 19 Aug 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/lrec/RobertsD16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/trec/RobertsDVH16,
  author       = {Kirk Roberts and
                  Dina Demner{-}Fushman and
                  Ellen M. Voorhees and
                  William R. Hersh},
  editor       = {Ellen M. Voorhees and
                  Angela Ellis},
  title        = {Overview of the {TREC} 2016 Clinical Decision Support Track},
  booktitle    = {Proceedings of The Twenty-Fifth Text REtrieval Conference, {TREC}
                  2016, Gaithersburg, Maryland, USA, November 15-18, 2016},
  series       = {{NIST} Special Publication},
  volume       = {500-321},
  publisher    = {National Institute of Standards and Technology {(NIST)}},
  year         = {2016},
  url          = {http://trec.nist.gov/pubs/trec25/papers/Overview-CL.pdf},
  timestamp    = {Wed, 03 Feb 2021 08:31:25 +0100},
  biburl       = {https://dblp.org/rec/conf/trec/RobertsDVH16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bionlp/2016,
  editor       = {Kevin Bretonnel Cohen and
                  Dina Demner{-}Fushman and
                  Sophia Ananiadou and
                  Jun'ichi Tsujii},
  title        = {Proceedings of the 15th Workshop on Biomedical Natural Language Processing,
                  BioNLP@ACL 2016, Berlin, Germany, August 12, 2016},
  publisher    = {Association for Computational Linguistics},
  year         = {2016},
  url          = {https://aclanthology.org/volumes/W16-29/},
  doi          = {10.18653/V1/W16-29},
  isbn         = {978-1-945626-12-8},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/2016.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/coling/2016biotxtm,
  editor       = {Sophia Ananiadou and
                  Riza Batista{-}Navarro and
                  Kevin Bretonnel Cohen and
                  Dina Demner{-}Fushman and
                  Paul Thompson},
  title        = {Proceedings of the Fifth Workshop on Building and Evaluating Resources
                  for Biomedical Text Mining, BioTxtM@COLING 2016, Osaka, Japan, December
                  12, 2016},
  publisher    = {The {COLING} 2016 Organizing Committee},
  year         = {2016},
  url          = {https://aclanthology.org/volumes/W16-51/},
  isbn         = {978-4-87974-719-8},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/coling/2016biotxtm.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/ShinRLDYS16,
  author       = {Hoo{-}Chang Shin and
                  Kirk Roberts and
                  Le Lu and
                  Dina Demner{-}Fushman and
                  Jianhua Yao and
                  Ronald M. Summers},
  title        = {Learning to Read Chest X-Rays: Recurrent Neural Cascade Model for
                  Automated Image Annotation},
  journal      = {CoRR},
  volume       = {abs/1603.08486},
  year         = {2016},
  url          = {http://arxiv.org/abs/1603.08486},
  eprinttype    = {arXiv},
  eprint       = {1603.08486},
  timestamp    = {Fri, 07 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/ShinRLDYS16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cmig/Demner-FushmanAKM15,
  author       = {Dina Demner{-}Fushman and
                  Sameer K. Antani and
                  Jayashree Kalpathy{-}Cramer and
                  Henning M{\"{u}}ller},
  title        = {A decade of community-wide efforts in advancing medical image understanding
                  and retrieval},
  journal      = {Comput. Medical Imaging Graph.},
  volume       = {39},
  pages        = {1--2},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.compmedimag.2014.12.002},
  doi          = {10.1016/J.COMPMEDIMAG.2014.12.002},
  timestamp    = {Fri, 27 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/cmig/Demner-FushmanAKM15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cmig/SimpsonYRXDAT15,
  author       = {Matthew S. Simpson and
                  Daekeun You and
                  Md. Mahmudur Rahman and
                  Zhiyun Xue and
                  Dina Demner{-}Fushman and
                  Sameer K. Antani and
                  George R. Thoma},
  title        = {Literature-based biomedical image classification and retrieval},
  journal      = {Comput. Medical Imaging Graph.},
  volume       = {39},
  pages        = {3--13},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.compmedimag.2014.06.006},
  doi          = {10.1016/J.COMPMEDIMAG.2014.06.006},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/cmig/SimpsonYRXDAT15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cmig/Kalpathy-CramerHDABM15,
  author       = {Jayashree Kalpathy{-}Cramer and
                  Alba Garcia Seco de Herrera and
                  Dina Demner{-}Fushman and
                  Sameer K. Antani and
                  Steven Bedrick and
                  Henning M{\"{u}}ller},
  title        = {Evaluating performance of biomedical image retrieval systems - An
                  overview of the medical image retrieval task at ImageCLEF 2004-2013},
  journal      = {Comput. Medical Imaging Graph.},
  volume       = {39},
  pages        = {55--61},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.compmedimag.2014.03.004},
  doi          = {10.1016/J.COMPMEDIMAG.2014.03.004},
  timestamp    = {Thu, 23 Jun 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/cmig/Kalpathy-CramerHDABM15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/RobertsSRAKD15,
  author       = {Kirk Roberts and
                  Sonya E. Shooshan and
                  Laritza Rodriguez and
                  Swapna Abhyankar and
                  Halil Kilicoglu and
                  Dina Demner{-}Fushman},
  title        = {The role of fine-grained annotations in supervised recognition of
                  risk factors for heart disease from EHRs},
  journal      = {J. Biomed. Informatics},
  volume       = {58},
  pages        = {S111--S119},
  year         = {2015},
  url          = {https://doi.org/10.1016/j.jbi.2015.06.010},
  doi          = {10.1016/J.JBI.2015.06.010},
  timestamp    = {Fri, 21 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jbi/RobertsSRAKD15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/CahanSRD15,
  author       = {Amos Cahan and
                  Sonya E. Shooshan and
                  Laritza Rodriguez and
                  Dina Demner{-}Fushman},
  title        = {Automated searches for personalized evidence to prevent hospital acquired
                  infection},
  booktitle    = {{AMIA} 2015, American Medical Informatics Association Annual Symposium,
                  San Francisco, CA, USA, November 14-18, 2015},
  publisher    = {{AMIA}},
  year         = {2015},
  url          = {https://knowledge.amia.org/59310-amia-1.2741865/t005-1.2744350/f005-1.2744351/2247961-1.2745346/2235140-1.2745343},
  timestamp    = {Wed, 04 Aug 2021 11:13:07 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/CahanSRD15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/Demner-FushmanM15,
  author       = {Dina Demner{-}Fushman and
                  James G. Mork},
  title        = {Extracting Characteristics of the Study Subjects from Full-Text Articles},
  booktitle    = {{AMIA} 2015, American Medical Informatics Association Annual Symposium,
                  San Francisco, CA, USA, November 14-18, 2015},
  publisher    = {{AMIA}},
  year         = {2015},
  url          = {https://knowledge.amia.org/59310-amia-1.2741865/t004-1.2745466/f004-1.2745467/2227426-1.2745765/2246983-1.2745762},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/Demner-FushmanM15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/KilicogluFRD15,
  author       = {Halil Kilicoglu and
                  Marcelo Fiszman and
                  Kirk Roberts and
                  Dina Demner{-}Fushman},
  title        = {An Ensemble Method for Spelling Correction in Consumer Health Questions},
  booktitle    = {{AMIA} 2015, American Medical Informatics Association Annual Symposium,
                  San Francisco, CA, USA, November 14-18, 2015},
  publisher    = {{AMIA}},
  year         = {2015},
  url          = {https://knowledge.amia.org/59310-amia-1.2741865/t004-1.2745466/f004-1.2745467/2248709-1.2745684/2248743-1.2745681},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/KilicogluFRD15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RobertsRSD15,
  author       = {Kirk Roberts and
                  Laritza Rodriguez and
                  Sonya E. Shooshan and
                  Dina Demner{-}Fushman},
  title        = {Automatic Extraction and Post-coordination of Spatial Relations in
                  Consumer Language},
  booktitle    = {{AMIA} 2015, American Medical Informatics Association Annual Symposium,
                  San Francisco, CA, USA, November 14-18, 2015},
  publisher    = {{AMIA}},
  year         = {2015},
  url          = {https://knowledge.amia.org/59310-amia-1.2741865/t004-1.2745466/f004-1.2745467/2248503-1.2745567/2248775-1.2745564},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/RobertsRSD15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RodriguezD15,
  author       = {Laritza Rodriguez and
                  Dina Demner{-}Fushman},
  title        = {Automatic Classification of Structured Product Labels for Pregnancy
                  Risk Drug Categories, a Machine Learning Approach},
  booktitle    = {{AMIA} 2015, American Medical Informatics Association Annual Symposium,
                  San Francisco, CA, USA, November 14-18, 2015},
  publisher    = {{AMIA}},
  year         = {2015},
  url          = {https://knowledge.amia.org/59310-amia-1.2741865/t004-1.2745466/f004-1.2745467/2248775-1.2745564/2246776-1.2745561},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/RodriguezD15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/XueCALJDT15,
  author       = {Zhiyun Xue and
                  Sema Candemir and
                  Sameer K. Antani and
                  L. Rodney Long and
                  Stefan Jaeger and
                  Dina Demner{-}Fushman and
                  George R. Thoma},
  editor       = {Jun Huan and
                  Satoru Miyano and
                  Amarda Shehu and
                  Xiaohua Tony Hu and
                  Bin Ma and
                  Sanguthevar Rajasekaran and
                  Vijay K. Gombar and
                  Matthieu{-}P. Schapranow and
                  Illhoi Yoo and
                  Jiayu Zhou and
                  Brian Chen and
                  Vinay Pai and
                  Brian G. Pierce},
  title        = {Foreign object detection in chest X-rays},
  booktitle    = {2015 {IEEE} International Conference on Bioinformatics and Biomedicine,
                  {BIBM} 2015, Washington, DC, USA, November 9-12, 2015},
  pages        = {956--961},
  publisher    = {{IEEE} Computer Society},
  year         = {2015},
  url          = {https://doi.org/10.1109/BIBM.2015.7359812},
  doi          = {10.1109/BIBM.2015.7359812},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bibm/XueCALJDT15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ecir/Demner-FushmanS15,
  author       = {Dina Demner{-}Fushman and
                  Sonya E. Shooshan and
                  Laritza Rodriguez and
                  Sameer K. Antani and
                  George R. Thoma},
  editor       = {Henning M{\"{u}}ller and
                  Oscar Alfonso Jim{\'{e}}nez del Toro and
                  Allan Hanbury and
                  Georg Langs and
                  Antonio Foncubierta{-}Rodr{\'{\i}}guez},
  title        = {Annotation of Chest Radiology Reports for Indexing and Retrieval},
  booktitle    = {Multimodal Retrieval in the Medical Domain - First International Workshop,
                  {MRMD} 2015, Vienna, Austria, March 29, 2015, Revised Selected Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {9059},
  pages        = {99--111},
  publisher    = {Springer},
  year         = {2015},
  url          = {https://doi.org/10.1007/978-3-319-24471-6\_9},
  doi          = {10.1007/978-3-319-24471-6\_9},
  timestamp    = {Fri, 27 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ecir/Demner-FushmanS15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bionlp/2015,
  editor       = {Kevin Bretonnel Cohen and
                  Dina Demner{-}Fushman and
                  Sophia Ananiadou and
                  Jun'ichi Tsujii},
  title        = {Proceedings of the Workshop on Biomedical Natural Language Processing,
                  BioNLP@IJCNLP 2015, Beijing, China, July 30, 2015},
  publisher    = {Association for Computational Linguistics},
  year         = {2015},
  url          = {https://aclanthology.org/volumes/W15-38/},
  doi          = {10.18653/V1/W15-38},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/2015.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijmir/RahmanYSADT14,
  author       = {Md. Mahmudur Rahman and
                  Daekeun You and
                  Matthew S. Simpson and
                  Sameer K. Antani and
                  Dina Demner{-}Fushman and
                  George R. Thoma},
  title        = {Interactive cross and multimodal biomedical image retrieval based
                  on automatic region-of-interest {(ROI)} identification and classification},
  journal      = {Int. J. Multim. Inf. Retr.},
  volume       = {3},
  number       = {3},
  pages        = {131--146},
  year         = {2014},
  url          = {https://doi.org/10.1007/s13735-014-0057-9},
  doi          = {10.1007/S13735-014-0057-9},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijmir/RahmanYSADT14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ir/SimpsonDAT14,
  author       = {Matthew S. Simpson and
                  Dina Demner{-}Fushman and
                  Sameer K. Antani and
                  George R. Thoma},
  title        = {Multimodal biomedical image indexing and retrieval using descriptive
                  text and global feature mapping},
  journal      = {Inf. Retr.},
  volume       = {17},
  number       = {3},
  pages        = {229--264},
  year         = {2014},
  url          = {https://doi.org/10.1007/s10791-013-9235-2},
  doi          = {10.1007/S10791-013-9235-2},
  timestamp    = {Tue, 06 Jun 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ir/SimpsonDAT14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/AbhyankarDCM14,
  author       = {Swapna Abhyankar and
                  Dina Demner{-}Fushman and
                  Fiona M. Callaghan and
                  Clement J. McDonald},
  title        = {Research and applications: Combining structured and unstructured data
                  to identify a cohort of {ICU} patients who received dialysis},
  journal      = {J. Am. Medical Informatics Assoc.},
  volume       = {21},
  number       = {5},
  pages        = {801--807},
  year         = {2014},
  url          = {https://doi.org/10.1136/amiajnl-2013-001915},
  doi          = {10.1136/AMIAJNL-2013-001915},
  timestamp    = {Mon, 11 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jamia/AbhyankarDCM14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/CallaghanDAJMM14,
  author       = {Fiona M. Callaghan and
                  Dina Demner{-}Fushman and
                  Swapna Abhyankar and
                  Matthew T. Jackson and
                  Mallika Mundkur and
                  Clement J. McDonald},
  title        = {Addressing some statistical challenges of using {EHR} data for clinical
                  research},
  booktitle    = {{AMIA} 2014, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 15-19, 2014},
  publisher    = {{AMIA}},
  year         = {2014},
  url          = {https://knowledge.amia.org/56638-amia-1.1540970/t-005-1.1543914/f-005-1.1543915/a-262-1.1544885/a-263-1.1544882},
  timestamp    = {Wed, 04 Aug 2021 11:13:07 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/CallaghanDAJMM14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/MorkDSA14,
  author       = {James G. Mork and
                  Dina Demner{-}Fushman and
                  Susan Schmidt and
                  Alan R. Aronson},
  title        = {Vocabulary Density Method for Customized Indexing of {MEDLINE} Journals},
  booktitle    = {{AMIA} 2014, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 15-19, 2014},
  publisher    = {{AMIA}},
  year         = {2014},
  url          = {https://knowledge.amia.org/56638-amia-1.1540970/t-005-1.1543914/f-005-1.1543915/a-450-1.1544321/a-451-1.1544318},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/MorkDSA14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RobertsCD14,
  author       = {Kirk Roberts and
                  Amos Cahan and
                  Dina Demner{-}Fushman},
  title        = {Error Propagation in EHRs via Copy/Paste: An Analysis of Relative
                  Dates},
  booktitle    = {{AMIA} 2014, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 15-19, 2014},
  publisher    = {{AMIA}},
  year         = {2014},
  url          = {https://knowledge.amia.org/56638-amia-1.1540970/t-005-1.1543914/f-005-1.1543915/a-493-1.1544192/a-494-1.1544189},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/RobertsCD14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/RobertsKFD14,
  author       = {Kirk Roberts and
                  Halil Kilicoglu and
                  Marcelo Fiszman and
                  Dina Demner{-}Fushman},
  title        = {Automatically Classifying Question Types for Consumer Health Questions},
  booktitle    = {{AMIA} 2014, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 15-19, 2014},
  publisher    = {{AMIA}},
  year         = {2014},
  url          = {https://knowledge.amia.org/56638-amia-1.1540970/t-004-1.1544972/f-004-1.1544973/a-202-1.1545067/a-203-1.1545064},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/RobertsKFD14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/StanBFD14,
  author       = {Johann Stan and
                  Olivier Bodenreider and
                  Kin Wah Fung and
                  Dina Demner{-}Fushman},
  title        = {Facilitating Reconciliation of Inter-Annotator Disagreements},
  booktitle    = {{AMIA} 2014, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 15-19, 2014},
  publisher    = {{AMIA}},
  year         = {2014},
  url          = {https://knowledge.amia.org/56638-amia-1.1540970/t-005-1.1543914/f-005-1.1543915/a-527-1.1544090/a-528-1.1544087},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/StanBFD14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/YouADT14,
  author       = {Daekeun You and
                  Sameer K. Antani and
                  Dina Demner{-}Fushman and
                  George R. Thoma},
  editor       = {Huiru Jane Zheng and
                  Werner Dubitzky and
                  Xiaohua Hu and
                  Jin{-}Kao Hao and
                  Daniel P. Berrar and
                  Kwang{-}Hyun Cho and
                  Yadong Wang and
                  David R. Gilbert},
  title        = {Biomedical image segmentation for semantic visual feature extraction},
  booktitle    = {2014 {IEEE} International Conference on Bioinformatics and Biomedicine,
                  {BIBM} 2014, Belfast, United Kingdom, November 2-5, 2014},
  pages        = {289--292},
  publisher    = {{IEEE} Computer Society},
  year         = {2014},
  url          = {https://doi.org/10.1109/BIBM.2014.6999170},
  doi          = {10.1109/BIBM.2014.6999170},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/bibm/YouADT14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bionlp/RobertsKFD14,
  author       = {Kirk Roberts and
                  Halil Kilicoglu and
                  Marcelo Fiszman and
                  Dina Demner{-}Fushman},
  editor       = {Kevin Bretonnel Cohen and
                  Dina Demner{-}Fushman and
                  Sophia Ananiadou and
                  Jun'ichi Tsujii},
  title        = {Decomposing Consumer Health Questions},
  booktitle    = {Proceedings of BioNLP, Baltimore, Maryland, USA, BioNLP@ACL 2014,
                  June 27-28, 2014},
  pages        = {29--37},
  publisher    = {Association for Computational Linguistics},
  year         = {2014},
  url          = {https://doi.org/10.3115/v1/W14-3405},
  doi          = {10.3115/V1/W14-3405},
  timestamp    = {Fri, 06 Aug 2021 00:41:22 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/RobertsKFD14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bionlp/KilicogluD14,
  author       = {Halil Kilicoglu and
                  Dina Demner{-}Fushman},
  editor       = {Kevin Bretonnel Cohen and
                  Dina Demner{-}Fushman and
                  Sophia Ananiadou and
                  Jun'ichi Tsujii},
  title        = {Coreference Resolution for Structured Drug Product Labels},
  booktitle    = {Proceedings of BioNLP, Baltimore, Maryland, USA, BioNLP@ACL 2014,
                  June 27-28, 2014},
  pages        = {45--53},
  publisher    = {Association for Computational Linguistics},
  year         = {2014},
  url          = {https://doi.org/10.3115/v1/W14-3407},
  doi          = {10.3115/V1/W14-3407},
  timestamp    = {Mon, 21 Aug 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/KilicogluD14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cbms/XueALDT14,
  author       = {Zhiyun Xue and
                  Sameer K. Antani and
                  L. Rodney Long and
                  Dina Demner{-}Fushman and
                  George R. Thoma},
  title        = {Body Segment Classification for Visible Human Cross Section Slices},
  booktitle    = {2014 {IEEE} 27th International Symposium on Computer-Based Medical
                  Systems, New York, NY, USA, May 27-29, 2014},
  pages        = {199--204},
  publisher    = {{IEEE} Computer Society},
  year         = {2014},
  url          = {https://doi.org/10.1109/CBMS.2014.55},
  doi          = {10.1109/CBMS.2014.55},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/cbms/XueALDT14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cbms/YouADT14,
  author       = {Daekeun You and
                  Sameer K. Antani and
                  Dina Demner{-}Fushman and
                  George R. Thoma},
  title        = {Does Figure-Text Improve Biomedical Article Retrieval? {A} Pilot Study},
  booktitle    = {2014 {IEEE} 27th International Symposium on Computer-Based Medical
                  Systems, New York, NY, USA, May 27-29, 2014},
  pages        = {471--472},
  publisher    = {{IEEE} Computer Society},
  year         = {2014},
  url          = {https://doi.org/10.1109/CBMS.2014.95},
  doi          = {10.1109/CBMS.2014.95},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/cbms/YouADT14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cbms/YouADT14a,
  author       = {Daekeun You and
                  Sameer K. Antani and
                  Dina Demner{-}Fushman and
                  George R. Thoma},
  title        = {An {MRF} Model for Biomedical Image Segmentation},
  booktitle    = {2014 {IEEE} 27th International Symposium on Computer-Based Medical
                  Systems, New York, NY, USA, May 27-29, 2014},
  pages        = {539--540},
  publisher    = {{IEEE} Computer Society},
  year         = {2014},
  url          = {https://doi.org/10.1109/CBMS.2014.128},
  doi          = {10.1109/CBMS.2014.128},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/cbms/YouADT14a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/clef/MorkDSA14,
  author       = {James G. Mork and
                  Dina Demner{-}Fushman and
                  Susan Schmidt and
                  Alan R. Aronson},
  editor       = {Linda Cappellato and
                  Nicola Ferro and
                  Martin Halvey and
                  Wessel Kraaij},
  title        = {Recent Enhancements to the {NLM} Medical Text Indexer},
  booktitle    = {Working Notes for {CLEF} 2014 Conference, Sheffield, UK, September
                  15-18, 2014},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1180},
  pages        = {1328--1336},
  publisher    = {CEUR-WS.org},
  year         = {2014},
  url          = {https://ceur-ws.org/Vol-1180/CLEF2014wn-QA-MorkEt2014.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:41 +0100},
  biburl       = {https://dblp.org/rec/conf/clef/MorkDSA14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/drr/ChachraXADT14,
  author       = {Suchet K. Chachra and
                  Zhiyun Xue and
                  Sameer K. Antani and
                  Dina Demner{-}Fushman and
                  George R. Thoma},
  editor       = {Bertrand Co{\"{u}}asnon and
                  Eric K. Ringger},
  title        = {Extraction and labeling high-resolution images from {PDF} documents},
  booktitle    = {Document Recognition and Retrieval XXI, San Francisco, California,
                  USA, February 5-6, 2014},
  series       = {{SPIE} Proceedings},
  volume       = {9021},
  pages        = {90210Q--90210Q--9},
  publisher    = {{SPIE}},
  year         = {2014},
  url          = {https://doi.org/10.1117/12.2042336},
  doi          = {10.1117/12.2042336},
  timestamp    = {Fri, 02 Jun 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/drr/ChachraXADT14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/drr/YouADT14,
  author       = {Daekeun You and
                  Sameer K. Antani and
                  Dina Demner{-}Fushman and
                  George R. Thoma},
  editor       = {Bertrand Co{\"{u}}asnon and
                  Eric K. Ringger},
  title        = {A contour-based shape descriptor for biomedical image classification
                  and retrieval},
  booktitle    = {Document Recognition and Retrieval XXI, San Francisco, California,
                  USA, February 5-6, 2014},
  series       = {{SPIE} Proceedings},
  volume       = {9021},
  pages        = {90210L--90210L--12},
  publisher    = {{SPIE}},
  year         = {2014},
  url          = {https://doi.org/10.1117/12.2042526},
  doi          = {10.1117/12.2042526},
  timestamp    = {Fri, 02 Jun 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/drr/YouADT14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/lrec/RobertsMFKD14,
  author       = {Kirk Roberts and
                  Kate Masterton and
                  Marcelo Fiszman and
                  Halil Kilicoglu and
                  Dina Demner{-}Fushman},
  editor       = {Nicoletta Calzolari and
                  Khalid Choukri and
                  Thierry Declerck and
                  Hrafn Loftsson and
                  Bente Maegaard and
                  Joseph Mariani and
                  Asunci{\'{o}}n Moreno and
                  Jan Odijk and
                  Stelios Piperidis},
  title        = {Annotating Question Decomposition on Complex Medical Questions},
  booktitle    = {Proceedings of the Ninth International Conference on Language Resources
                  and Evaluation, {LREC} 2014, Reykjavik, Iceland, May 26-31, 2014},
  pages        = {2598--2602},
  publisher    = {European Language Resources Association {(ELRA)}},
  year         = {2014},
  url          = {http://www.lrec-conf.org/proceedings/lrec2014/summaries/124.html},
  timestamp    = {Mon, 19 Aug 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/lrec/RobertsMFKD14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wacv/PedrosaRADLT14,
  author       = {Glauco Vitor Pedrosa and
                  Md. Mahmudur Rahman and
                  Sameer K. Antani and
                  Dina Demner{-}Fushman and
                  L. Rodney Long and
                  Agma J. M. Traina},
  title        = {Integrating visual words as bunch of n-grams for effective biomedical
                  image classification},
  booktitle    = {{IEEE} Winter Conference on Applications of Computer Vision, Steamboat
                  Springs, CO, USA, March 24-26, 2014},
  pages        = {431--436},
  publisher    = {{IEEE} Computer Society},
  year         = {2014},
  url          = {https://doi.org/10.1109/WACV.2014.6836069},
  doi          = {10.1109/WACV.2014.6836069},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/wacv/PedrosaRADLT14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bionlp/2014,
  editor       = {Kevin Bretonnel Cohen and
                  Dina Demner{-}Fushman and
                  Sophia Ananiadou and
                  Jun'ichi Tsujii},
  title        = {Proceedings of BioNLP, Baltimore, Maryland, USA, BioNLP@ACL 2014,
                  June 27-28, 2014},
  publisher    = {Association for Computational Linguistics},
  year         = {2014},
  url          = {https://aclanthology.org/volumes/W14-34/},
  doi          = {10.3115/V1/W14-34},
  isbn         = {978-1-941643-18-1},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/2014.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijmir/RahmanYSADT13,
  author       = {Md. Mahmudur Rahman and
                  Daekeun You and
                  Matthew S. Simpson and
                  Sameer K. Antani and
                  Dina Demner{-}Fushman and
                  George R. Thoma},
  title        = {Multimodal biomedical image retrieval using hierarchical classification
                  and modality fusion},
  journal      = {Int. J. Multim. Inf. Retr.},
  volume       = {2},
  number       = {3},
  pages        = {159--173},
  year         = {2013},
  url          = {https://doi.org/10.1007/s13735-013-0038-4},
  doi          = {10.1007/S13735-013-0038-4},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ijmir/RahmanYSADT13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/FungJD13,
  author       = {Kin Wah Fung and
                  Chiang S. Jao and
                  Dina Demner{-}Fushman},
  title        = {Extracting drug indication information from structured product labels
                  using natural language processing},
  journal      = {J. Am. Medical Informatics Assoc.},
  volume       = {20},
  number       = {3},
  pages        = {482--488},
  year         = {2013},
  url          = {https://doi.org/10.1136/amiajnl-2012-001291},
  doi          = {10.1136/AMIAJNL-2012-001291},
  timestamp    = {Mon, 11 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jamia/FungJD13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jasis/ApostolovaYXADT13,
  author       = {Emilia Apostolova and
                  Daekeun You and
                  Zhiyun Xue and
                  Sameer K. Antani and
                  Dina Demner{-}Fushman and
                  George R. Thoma},
  title        = {Image retrieval from scientific publications: Text and image content
                  processing to separate multipanel figures},
  journal      = {J. Assoc. Inf. Sci. Technol.},
  volume       = {64},
  number       = {5},
  pages        = {893--908},
  year         = {2013},
  url          = {https://doi.org/10.1002/asi.22810},
  doi          = {10.1002/ASI.22810},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jasis/ApostolovaYXADT13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/AbhyankarD13,
  author       = {Swapna Abhyankar and
                  Dina Demner{-}Fushman},
  title        = {A simple method to extract key maternal data from neonatal clinical
                  notes},
  booktitle    = {{AMIA} 2013, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 16-20, 2013},
  publisher    = {{AMIA}},
  year         = {2013},
  url          = {https://knowledge.amia.org/amia-55142-a2013e-1.580047/t-05-1.583941/f-005-1.583942/a-002-1.584344},
  timestamp    = {Wed, 04 Aug 2021 11:13:06 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/AbhyankarD13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/Demner-FushmanMA13,
  author       = {Dina Demner{-}Fushman and
                  James G. Mork and
                  Alan R. Aronson},
  title        = {Mining {MEDLINE} for problems associated with vitamin {D}},
  booktitle    = {{AMIA} 2013, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 16-20, 2013},
  publisher    = {{AMIA}},
  year         = {2013},
  url          = {https://knowledge.amia.org/amia-55142-a2013e-1.580047/t-05-1.583941/f-005-1.583942/a-100-1.584255/a-104-1.584250},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/Demner-FushmanMA13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/Jimeno-YepesMDA13,
  author       = {Antonio Jimeno{-}Yepes and
                  James G. Mork and
                  Dina Demner{-}Fushman and
                  Alan R. Aronson},
  title        = {Comparison and combination of several MeSH indexing approaches},
  booktitle    = {{AMIA} 2013, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 16-20, 2013},
  publisher    = {{AMIA}},
  year         = {2013},
  url          = {https://knowledge.amia.org/amia-55142-a2013e-1.580047/t-05-1.583941/f-005-1.583942/a-226-1.584146/a-234-1.584141},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/Jimeno-YepesMDA13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bionlp/KilicogluFD13,
  author       = {Halil Kilicoglu and
                  Marcelo Fiszman and
                  Dina Demner{-}Fushman},
  editor       = {Kevin Bretonnel Cohen and
                  Dina Demner{-}Fushman and
                  Sophia Ananiadou and
                  John Pestian and
                  Junichi Tsujii},
  title        = {Interpreting Consumer Health Questions: The Role of Anaphora and Ellipsis},
  booktitle    = {Proceedings of the 2013 Workshop on Biomedical Natural Language Processing,
                  BioNLP@ACL 2013, Sofia, Bulgaria, August 8, 2013},
  pages        = {54--62},
  publisher    = {Association for Computational Linguistics},
  year         = {2013},
  url          = {https://aclanthology.org/W13-1907/},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/KilicogluFD13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/clef/HerreraKDAM13,
  author       = {Alba Garcia Seco de Herrera and
                  Jayashree Kalpathy{-}Cramer and
                  Dina Demner{-}Fushman and
                  Sameer K. Antani and
                  Henning M{\"{u}}ller},
  editor       = {Pamela Forner and
                  Roberto Navigli and
                  Dan Tufis and
                  Nicola Ferro},
  title        = {Overview of the ImageCLEF 2013 Medical Tasks},
  booktitle    = {Working Notes for {CLEF} 2013 Conference , Valencia, Spain, September
                  23-26, 2013},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1179},
  publisher    = {CEUR-WS.org},
  year         = {2013},
  url          = {https://ceur-ws.org/Vol-1179/CLEF2013wn-ImageCLEF-SecoDeHerreraEt2013b.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:37 +0100},
  biburl       = {https://dblp.org/rec/conf/clef/HerreraKDAM13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/clef/SimpsonYRDAT13,
  author       = {Matthew S. Simpson and
                  Daekeun You and
                  Md. Mahmudur Rahman and
                  Dina Demner{-}Fushman and
                  Sameer K. Antani and
                  George R. Thoma},
  editor       = {Pamela Forner and
                  Roberto Navigli and
                  Dan Tufis and
                  Nicola Ferro},
  title        = {ITI's Participation in the 2013 Medical Track of ImageCLEF},
  booktitle    = {Working Notes for {CLEF} 2013 Conference , Valencia, Spain, September
                  23-26, 2013},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1179},
  publisher    = {CEUR-WS.org},
  year         = {2013},
  url          = {https://ceur-ws.org/Vol-1179/CLEF2013wn-ImageCLEF-SimpsonEt2013.pdf},
  timestamp    = {Fri, 10 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/clef/SimpsonYRDAT13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/drr/YouSADT13,
  author       = {Daekeun You and
                  Matthew S. Simpson and
                  Sameer K. Antani and
                  Dina Demner{-}Fushman and
                  George R. Thoma},
  editor       = {Richard Zanibbi and
                  Bertrand Co{\"{u}}asnon},
  title        = {Annotating image ROIs with text descriptions for multimodal biomedical
                  document retrieval},
  booktitle    = {Document Recognition and Retrieval XX, part of the IS{\&}T-SPIE
                  Electronic Imaging Symposium, Burlingame, California, USA, February
                  5-7, 2013, Proceedings},
  series       = {{SPIE} Proceedings},
  volume       = {8658},
  pages        = {86580D},
  publisher    = {{SPIE}},
  year         = {2013},
  url          = {https://doi.org/10.1117/12.2005937},
  doi          = {10.1117/12.2005937},
  timestamp    = {Fri, 02 Jun 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/drr/YouSADT13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/drr/YouSADT13a,
  author       = {Daekeun You and
                  Matthew S. Simpson and
                  Sameer K. Antani and
                  Dina Demner{-}Fushman and
                  George R. Thoma},
  editor       = {Richard Zanibbi and
                  Bertrand Co{\"{u}}asnon},
  title        = {A robust pointer segmentation in biomedical images toward building
                  a visual ontology for biomedical article retrieval},
  booktitle    = {Document Recognition and Retrieval XX, part of the IS{\&}T-SPIE
                  Electronic Imaging Symposium, Burlingame, California, USA, February
                  5-7, 2013, Proceedings},
  series       = {{SPIE} Proceedings},
  volume       = {8658},
  pages        = {86580Q},
  publisher    = {{SPIE}},
  year         = {2013},
  url          = {https://doi.org/10.1117/12.2005934},
  doi          = {10.1117/12.2005934},
  timestamp    = {Fri, 02 Jun 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/drr/YouSADT13a.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ichi/XueALDT13,
  author       = {Zhiyun Xue and
                  Sameer K. Antani and
                  L. Rodney Long and
                  Dina Demner{-}Fushman and
                  George R. Thoma},
  title        = {Classification of {CT} Figures in Biomedical Articles Based on Body
                  Segments},
  booktitle    = {{IEEE} International Conference on Healthcare Informatics, {ICHI}
                  2013, 9-11 September, 2013, Philadelphia, PA, {USA}},
  pages        = {264--268},
  publisher    = {{IEEE} Computer Society},
  year         = {2013},
  url          = {https://doi.org/10.1109/ICHI.2013.17},
  doi          = {10.1109/ICHI.2013.17},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ichi/XueALDT13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/Demner-FushmanSFT13,
  author       = {Dina Demner{-}Fushman and
                  Charlotte A. Seckman and
                  Cheryl Fisher and
                  George R. Thoma},
  editor       = {Christoph Ulrich Lehmann and
                  Elske Ammenwerth and
                  Christian N{\o}hr},
  title        = {Continual Development of a Personalized Decision Support System},
  booktitle    = {{MEDINFO} 2013 - Proceedings of the 14th World Congress on Medical
                  and Health Informatics, 20-13 August 2013, Copenhagen, Denmark},
  series       = {Studies in Health Technology and Informatics},
  volume       = {192},
  pages        = {175--179},
  publisher    = {{IOS} Press},
  year         = {2013},
  url          = {https://doi.org/10.3233/978-1-61499-289-9-175},
  doi          = {10.3233/978-1-61499-289-9-175},
  timestamp    = {Wed, 03 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/medinfo/Demner-FushmanSFT13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bionlp/2013,
  editor       = {Kevin Bretonnel Cohen and
                  Dina Demner{-}Fushman and
                  Sophia Ananiadou and
                  John Pestian and
                  Junichi Tsujii},
  title        = {Proceedings of the 2013 Workshop on Biomedical Natural Language Processing,
                  BioNLP@ACL 2013, Sofia, Bulgaria, August 8, 2013},
  publisher    = {Association for Computational Linguistics},
  year         = {2013},
  url          = {https://aclanthology.org/volumes/W13-19/},
  isbn         = {978-1-937284-54-1},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/2013.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/artmed/BekhuisD12,
  author       = {Tanja Bekhuis and
                  Dina Demner{-}Fushman},
  title        = {Screening nonrandomized studies for medical systematic reviews: {A}
                  comparative study of classifiers},
  journal      = {Artif. Intell. Medicine},
  volume       = {55},
  number       = {3},
  pages        = {197--207},
  year         = {2012},
  url          = {https://doi.org/10.1016/j.artmed.2012.05.002},
  doi          = {10.1016/J.ARTMED.2012.05.002},
  timestamp    = {Thu, 20 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/artmed/BekhuisD12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/AbhyankarDM12,
  author       = {Swapna Abhyankar and
                  Dina Demner{-}Fushman and
                  Clement J. McDonald},
  title        = {Standardizing clinical laboratory data for secondary use},
  journal      = {J. Biomed. Informatics},
  volume       = {45},
  number       = {4},
  pages        = {642--650},
  year         = {2012},
  url          = {https://doi.org/10.1016/j.jbi.2012.04.012},
  doi          = {10.1016/J.JBI.2012.04.012},
  timestamp    = {Tue, 16 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jbi/AbhyankarDM12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/RanceDDKB12,
  author       = {Bastien Rance and
                  Emily Doughty and
                  Dina Demner{-}Fushman and
                  Maricel G. Kann and
                  Olivier Bodenreider},
  title        = {A mutation-centric approach to identifying pharmacogenomic relations
                  in text},
  journal      = {J. Biomed. Informatics},
  volume       = {45},
  number       = {5},
  pages        = {835--841},
  year         = {2012},
  url          = {https://doi.org/10.1016/j.jbi.2012.05.003},
  doi          = {10.1016/J.JBI.2012.05.003},
  timestamp    = {Tue, 16 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jbi/RanceDDKB12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcse/Jimeno-YepesMDA12,
  author       = {Antonio Jimeno{-}Yepes and
                  James G. Mork and
                  Dina Demner{-}Fushman and
                  Alan R. Aronson},
  title        = {A One-Size-Fits-All Indexing Method Does Not Exist: Automatic Selection
                  Based on Meta-Learning},
  journal      = {J. Comput. Sci. Eng.},
  volume       = {6},
  number       = {2},
  pages        = {151--160},
  year         = {2012},
  url          = {https://doi.org/10.5626/JCSE.2012.6.2.151},
  doi          = {10.5626/JCSE.2012.6.2.151},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcse/Jimeno-YepesMDA12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcse/Demner-FushmanAST12,
  author       = {Dina Demner{-}Fushman and
                  Sameer K. Antani and
                  Matthew S. Simpson and
                  George R. Thoma},
  title        = {Design and Development of a Multimodal Biomedical Information Retrieval
                  System},
  journal      = {J. Comput. Sci. Eng.},
  volume       = {6},
  number       = {2},
  pages        = {168--177},
  year         = {2012},
  url          = {https://doi.org/10.5626/JCSE.2012.6.2.168},
  doi          = {10.5626/JCSE.2012.6.2.168},
  timestamp    = {Thu, 27 Aug 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jcse/Demner-FushmanAST12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/BekhuisDC12,
  author       = {Tanja Bekhuis and
                  Dina Demner{-}Fushman and
                  Rebecca S. Crowley},
  title        = {Research Designs in Mesh and Emtree: {A} Comparative Study of Coverage},
  booktitle    = {{AMIA} 2012, American Medical Informatics Association Annual Symposium,
                  Chicago, Illinois, USA, November 3-7, 2012},
  publisher    = {{AMIA}},
  year         = {2012},
  url          = {https://knowledge.amia.org/amia-55142-a2012a-1.636547/t-006-1.640361/f-001-1.640362/a-218-1.640562/a-219-1.640559},
  timestamp    = {Wed, 04 Aug 2021 11:13:05 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/BekhuisDC12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/SimpsonYRATD12,
  author       = {Matthew S. Simpson and
                  Daekeun You and
                  Md. Mahmudur Rahman and
                  Sameer K. Antani and
                  George R. Thoma and
                  Dina Demner{-}Fushman},
  title        = {Towards the Creation of a Visual Ontology of Biomedical Imaging Entities},
  booktitle    = {{AMIA} 2012, American Medical Informatics Association Annual Symposium,
                  Chicago, Illinois, USA, November 3-7, 2012},
  publisher    = {{AMIA}},
  year         = {2012},
  url          = {https://knowledge.amia.org/amia-55142-a2012a-1.636547/t-003-1.640625/f-001-1.640626/a-099-1.640933/a-100-1.640930},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/SimpsonYRATD12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/XueALDT12,
  author       = {Zhiyun Xue and
                  Sameer K. Antani and
                  L. Rodney Long and
                  Dina Demner{-}Fushman and
                  George R. Thoma},
  title        = {Window Classification of Brain {CT} Images in Biomedical Articles},
  booktitle    = {{AMIA} 2012, American Medical Informatics Association Annual Symposium,
                  Chicago, Illinois, USA, November 3-7, 2012},
  publisher    = {{AMIA}},
  year         = {2012},
  url          = {https://knowledge.amia.org/amia-55142-a2012a-1.636547/t-003-1.640625/f-001-1.640626/a-116-1.640881/a-117-1.640878},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/XueALDT12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bionlp/ApostolovaTMD12,
  author       = {Emilia Apostolova and
                  Noriko Tomuro and
                  Pattanasak Mongkolwat and
                  Dina Demner{-}Fushman},
  editor       = {Kevin Bretonnel Cohen and
                  Dina Demner{-}Fushman and
                  Sophia Ananiadou and
                  Bonnie L. Webber and
                  Jun'ichi Tsujii and
                  John Pestian},
  title        = {Domain Adaptation of Coreference Resolution for Radiology Reports},
  booktitle    = {Proceedings of the 2012 Workshop on Biomedical Natural Language Processing,
                  BioNLP@HLT-NAACL Montr{\`{e}}al, Canada, June 8, 2012},
  pages        = {118--121},
  publisher    = {Association for Computational Linguistics},
  year         = {2012},
  url          = {https://aclanthology.org/W12-2414/},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/ApostolovaTMD12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/clef/MullerHKDAE12,
  author       = {Henning M{\"{u}}ller and
                  Alba Garcia Seco de Herrera and
                  Jayashree Kalpathy{-}Cramer and
                  Dina Demner{-}Fushman and
                  Sameer K. Antani and
                  Ivan Eggel},
  editor       = {Pamela Forner and
                  Jussi Karlgren and
                  Christa Womser{-}Hacker},
  title        = {Overview of the ImageCLEF 2012 Medical Image Retrieval and Classification
                  Tasks},
  booktitle    = {{CLEF} 2012 Evaluation Labs and Workshop, Online Working Notes, Rome,
                  Italy, September 17-20, 2012},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1178},
  publisher    = {CEUR-WS.org},
  year         = {2012},
  url          = {https://ceur-ws.org/Vol-1178/CLEF2012wn-ImageCLEF-MullerEt2012.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:42 +0100},
  biburl       = {https://dblp.org/rec/conf/clef/MullerHKDAE12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/clef/SimpsonYRDAT12,
  author       = {Matthew S. Simpson and
                  Daekeun You and
                  Md. Mahmudur Rahman and
                  Dina Demner{-}Fushman and
                  Sameer K. Antani and
                  George R. Thoma},
  editor       = {Pamela Forner and
                  Jussi Karlgren and
                  Christa Womser{-}Hacker},
  title        = {ITI's Participation in the ImageCLEF 2012 Medical Retrieval and Classification
                  Tasks},
  booktitle    = {{CLEF} 2012 Evaluation Labs and Workshop, Online Working Notes, Rome,
                  Italy, September 17-20, 2012},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1178},
  publisher    = {CEUR-WS.org},
  year         = {2012},
  url          = {https://ceur-ws.org/Vol-1178/CLEF2012wn-ImageCLEF-SimpsonEt2012.pdf},
  timestamp    = {Fri, 10 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/clef/SimpsonYRDAT12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dils/Demner-FushmanA12,
  author       = {Dina Demner{-}Fushman and
                  Swapna Abhyankar},
  editor       = {Olivier Bodenreider and
                  Bastien Rance},
  title        = {Syntactic-Semantic Frames for Clinical Cohort Identification Queries},
  booktitle    = {Data Integration in the Life Sciences - 8th International Conference,
                  {DILS} 2012, College Park, MD, USA, June 28-29, 2012. Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {7348},
  pages        = {100--112},
  publisher    = {Springer},
  year         = {2012},
  url          = {https://doi.org/10.1007/978-3-642-31040-9\_11},
  doi          = {10.1007/978-3-642-31040-9\_11},
  timestamp    = {Tue, 14 May 2019 10:00:42 +0200},
  biburl       = {https://dblp.org/rec/conf/dils/Demner-FushmanA12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hisb/RahmanYSADT12,
  author       = {Md. Mahmudur Rahman and
                  Daekeun You and
                  Matthew S. Simpson and
                  Sameer K. Antani and
                  Dina Demner{-}Fushman and
                  George R. Thoma},
  title        = {An Interactive Image Retrieval Framework for Biomedical Articles Based
                  on Visual Region-of- Interest {(ROI)} Identification and Classification},
  booktitle    = {2012 {IEEE} Second International Conference on Healthcare Informatics,
                  Imaging and Systems Biology, {HISB} 2012, La Jolla, CA, USA, September
                  27-28, 2012},
  pages        = {50},
  publisher    = {{IEEE} Computer Society},
  year         = {2012},
  url          = {https://doi.org/10.1109/HISB.2012.18},
  doi          = {10.1109/HISB.2012.18},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/hisb/RahmanYSADT12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ihi/YepesMWDA12,
  author       = {Antonio Jimeno{-}Yepes and
                  James G. Mork and
                  Bartlomiej Wilkowski and
                  Dina Demner{-}Fushman and
                  Alan R. Aronson},
  editor       = {Gang Luo and
                  Jiming Liu and
                  Christopher C. Yang},
  title        = {{MEDLINE} MeSH indexing: lessons learned from machine learning and
                  future directions},
  booktitle    = {{ACM} International Health Informatics Symposium, {IHI} '12, Miami,
                  FL, USA, January 28-30, 2012},
  pages        = {737--742},
  publisher    = {{ACM}},
  year         = {2012},
  url          = {https://doi.org/10.1145/2110363.2110450},
  doi          = {10.1145/2110363.2110450},
  timestamp    = {Tue, 06 Nov 2018 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/ihi/YepesMWDA12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/trec/Demner-FushmanA12,
  author       = {Dina Demner{-}Fushman and
                  Swapna Abhyankar and
                  Antonio Jimeno{-}Yepes and
                  Russell F. Loane and
                  Fran{\c{c}}ois{-}Michel Lang and
                  James G. Mork and
                  Nicolas Ide and
                  Alan R. Aronson},
  editor       = {Ellen M. Voorhees and
                  Lori P. Buckland},
  title        = {{NLM} at {TREC} 2012 Medical Records Track},
  booktitle    = {Proceedings of The Twenty-First Text REtrieval Conference, {TREC}
                  2012, Gaithersburg, Maryland, USA, November 6-9, 2012},
  series       = {{NIST} Special Publication},
  volume       = {500-298},
  publisher    = {National Institute of Standards and Technology {(NIST)}},
  year         = {2012},
  url          = {http://trec.nist.gov/pubs/trec21/papers/NLM.medical.final.pdf},
  timestamp    = {Wed, 07 Jul 2021 16:44:22 +0200},
  biburl       = {https://dblp.org/rec/conf/trec/Demner-FushmanA12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/sp/mining2012/SimpsonD12,
  author       = {Matthew S. Simpson and
                  Dina Demner{-}Fushman},
  editor       = {Charu C. Aggarwal and
                  ChengXiang Zhai},
  title        = {Biomedical Text Mining: {A} Survey of Recent Progress},
  booktitle    = {Mining Text Data},
  pages        = {465--517},
  publisher    = {Springer},
  year         = {2012},
  url          = {https://doi.org/10.1007/978-1-4614-3223-4\_14},
  doi          = {10.1007/978-1-4614-3223-4\_14},
  timestamp    = {Tue, 16 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/books/sp/mining2012/SimpsonD12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bionlp/2012,
  editor       = {Kevin Bretonnel Cohen and
                  Dina Demner{-}Fushman and
                  Sophia Ananiadou and
                  Bonnie L. Webber and
                  Jun'ichi Tsujii and
                  John Pestian},
  title        = {Proceedings of the 2012 Workshop on Biomedical Natural Language Processing,
                  BioNLP@HLT-NAACL Montr{\`{e}}al, Canada, June 8, 2012},
  publisher    = {Association for Computational Linguistics},
  year         = {2012},
  url          = {https://aclanthology.org/volumes/W12-24/},
  isbn         = {978-1-937284-20-6},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/2012.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cmig/StanleyDDAT11,
  author       = {Ronald Joe Stanley and
                  Soumya De and
                  Dina Demner{-}Fushman and
                  Sameer K. Antani and
                  George R. Thoma},
  title        = {An image feature-based approach to automatically find images for application
                  to clinical decision support},
  journal      = {Comput. Medical Imaging Graph.},
  volume       = {35},
  number       = {5},
  pages        = {365--372},
  year         = {2011},
  url          = {https://doi.org/10.1016/j.compmedimag.2010.11.008},
  doi          = {10.1016/J.COMPMEDIMAG.2010.11.008},
  timestamp    = {Tue, 05 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/cmig/StanleyDDAT11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/acl/ApostolovaTD11,
  author       = {Emilia Apostolova and
                  Noriko Tomuro and
                  Dina Demner{-}Fushman},
  title        = {Automatic Extraction of Lexico-Syntactic Patterns for Detection of
                  Negation and Speculation Scopes},
  booktitle    = {The 49th Annual Meeting of the Association for Computational Linguistics:
                  Human Language Technologies, Proceedings of the Conference, 19-24
                  June, 2011, Portland, Oregon, {USA} - Short Papers},
  pages        = {283--287},
  publisher    = {The Association for Computer Linguistics},
  year         = {2011},
  url          = {https://aclanthology.org/P11-2049/},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/acl/ApostolovaTD11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/clef/SimpsonRPADAT11,
  author       = {Matthew S. Simpson and
                  Md. Mahmudur Rahman and
                  Srinivas Phadnis and
                  Emilia Apostolova and
                  Dina Demner{-}Fushman and
                  Sameer K. Antani and
                  George R. Thoma},
  editor       = {Vivien Petras and
                  Pamela Forner and
                  Paul D. Clough},
  title        = {Text and Content-based Approaches to Image Modality Classification
                  and Retrieval for the ImageCLEF 2011 Medical Retrieval Track},
  booktitle    = {{CLEF} 2011 Labs and Workshop, Notebook Papers, 19-22 September 2011,
                  Amsterdam, The Netherlands},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1177},
  publisher    = {CEUR-WS.org},
  year         = {2011},
  url          = {https://ceur-ws.org/Vol-1177/CLEF2011wn-ImageCLEF-SimpsonEt2011.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:36 +0100},
  biburl       = {https://dblp.org/rec/conf/clef/SimpsonRPADAT11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/drr/YouADRGT11,
  author       = {Daekeun You and
                  Sameer K. Antani and
                  Dina Demner{-}Fushman and
                  Md. Mahmudur Rahman and
                  Venu Govindaraju and
                  George R. Thoma},
  editor       = {Gady Agam and
                  Christian Viard{-}Gaudin},
  title        = {Automatic identification of {ROI} in figure images toward improving
                  hybrid (text and image) biomedical document retrieval},
  booktitle    = {Document Recognition and Retrieval XVIII, part of the IS{\&}T-SPIE
                  Electronic Imaging Symposium, San Jose, CA, USA, January 26-27, 2011,
                  Proceedings},
  series       = {{SPIE} Proceedings},
  volume       = {7874},
  pages        = {78740K},
  publisher    = {{SPIE}},
  year         = {2011},
  url          = {https://doi.org/10.1117/12.873434},
  doi          = {10.1117/12.873434},
  timestamp    = {Fri, 02 Jun 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/drr/YouADRGT11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icdar/YouADGT11,
  author       = {Daekeun You and
                  Sameer K. Antani and
                  Dina Demner{-}Fushman and
                  Venu Govindaraju and
                  George R. Thoma},
  title        = {Detecting Figure-Panel Labels in Medical Journal Articles Using {MRF}},
  booktitle    = {2011 International Conference on Document Analysis and Recognition,
                  {ICDAR} 2011, Beijing, China, September 18-21, 2011},
  pages        = {967--971},
  publisher    = {{IEEE} Computer Society},
  year         = {2011},
  url          = {https://doi.org/10.1109/ICDAR.2011.196},
  doi          = {10.1109/ICDAR.2011.196},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icdar/YouADGT11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/RahmanADT11,
  author       = {Md. Mahmudur Rahman and
                  Sameer K. Antani and
                  Dina Demner{-}Fushman and
                  George R. Thoma},
  editor       = {Henning M{\"{u}}ller and
                  Hayit Greenspan and
                  Tanveer Fathima Syeda{-}Mahmood},
  title        = {Biomedical Image Retrieval Using Multimodal Context and Concept Feature
                  Spaces},
  booktitle    = {Medical Content-Based Retrieval for Clinical Decision Support - Second
                  {MICCAI} International Workshop, {MCBR-CDS} 2011, Toronto, ON, Canada,
                  September 22, 2011, Revised Selected Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {7075},
  pages        = {24--35},
  publisher    = {Springer},
  year         = {2011},
  url          = {https://doi.org/10.1007/978-3-642-28460-1\_3},
  doi          = {10.1007/978-3-642-28460-1\_3},
  timestamp    = {Sun, 02 Jun 2019 21:24:54 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/RahmanADT11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/trec/Demner-FushmanAJLRLIAA11,
  author       = {Dina Demner{-}Fushman and
                  Swapna Abhyankar and
                  Antonio Jimeno{-}Yepes and
                  Russell F. Loane and
                  Bastien Rance and
                  Fran{\c{c}}ois{-}Michel Lang and
                  Nicholas C. Ide and
                  Emilia Apostolova and
                  Alan R. Aronson},
  editor       = {Ellen M. Voorhees and
                  Lori P. Buckland},
  title        = {A Knowledge-Based Approach to Medical Records Retrieval},
  booktitle    = {Proceedings of The Twentieth Text REtrieval Conference, {TREC} 2011,
                  Gaithersburg, Maryland, USA, November 15-18, 2011},
  series       = {{NIST} Special Publication},
  volume       = {500-296},
  publisher    = {National Institute of Standards and Technology {(NIST)}},
  year         = {2011},
  url          = {http://trec.nist.gov/pubs/trec20/papers/NLM.medical.pdf},
  timestamp    = {Wed, 03 Feb 2021 08:31:23 +0100},
  biburl       = {https://dblp.org/rec/conf/trec/Demner-FushmanAJLRLIAA11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bionlp/2011,
  editor       = {Kevin Bretonnel Cohen and
                  Dina Demner{-}Fushman and
                  Sophia Ananiadou and
                  John Pestian and
                  Jun'ichi Tsujii and
                  Bonnie L. Webber},
  title        = {Proceedings of the 2011 Workshop on Biomedical Natural Language Processing,
                  BioNLP@ACL, Portland, Oregon, USA, June 23-24, 2011},
  publisher    = {Association for Computational Linguistics},
  year         = {2011},
  url          = {https://aclanthology.org/volumes/W11-02/},
  isbn         = {978-1-932432-91-6},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/2011.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/MorkBDDLLNPSA10,
  author       = {James G. Mork and
                  Olivier Bodenreider and
                  Dina Demner{-}Fushman and
                  Rezarta Islamaj Dogan and
                  Fran{\c{c}}ois{-}Michel Lang and
                  Zhiyong Lu and
                  Aur{\'{e}}lie N{\'{e}}v{\'{e}}ol and
                  Lee B. Peters and
                  Sonya E. Shooshan and
                  Alan R. Aronson},
  title        = {Extracting Rx information from clinical narrative},
  journal      = {J. Am. Medical Informatics Assoc.},
  volume       = {17},
  number       = {5},
  pages        = {536--539},
  year         = {2010},
  url          = {https://doi.org/10.1136/jamia.2010.003970},
  doi          = {10.1136/JAMIA.2010.003970},
  timestamp    = {Mon, 11 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jamia/MorkBDDLLNPSA10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/Demner-FushmanMSA10,
  author       = {Dina Demner{-}Fushman and
                  James G. Mork and
                  Sonya E. Shooshan and
                  Alan R. Aronson},
  title        = {{UMLS} content views appropriate for {NLP} processing of the biomedical
                  literature vs. clinical text},
  journal      = {J. Biomed. Informatics},
  volume       = {43},
  number       = {4},
  pages        = {587--594},
  year         = {2010},
  url          = {https://doi.org/10.1016/j.jbi.2010.02.005},
  doi          = {10.1016/J.JBI.2010.02.005},
  timestamp    = {Tue, 16 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jbi/Demner-FushmanMSA10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ws/ThomaFADCS10,
  author       = {George R. Thoma and
                  Glenn Ford and
                  Sameer K. Antani and
                  Dina Demner{-}Fushman and
                  Michael Chung and
                  Matthew S. Simpson},
  title        = {Interactive publication: The document as a research tool},
  journal      = {J. Web Semant.},
  volume       = {8},
  number       = {2-3},
  pages        = {145--150},
  year         = {2010},
  url          = {https://doi.org/10.1016/j.websem.2010.04.001},
  doi          = {10.1016/J.WEBSEM.2010.04.001},
  timestamp    = {Tue, 29 Jan 2019 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ws/ThomaFADCS10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/clef/SimpsonRSDAT10,
  author       = {Matthew S. Simpson and
                  Md. Mahmudur Rahman and
                  Sachin Singhal and
                  Dina Demner{-}Fushman and
                  Sameer K. Antani and
                  George R. Thoma},
  editor       = {Martin Braschler and
                  Donna Harman and
                  Emanuele Pianta},
  title        = {Text- and Content-based Approaches to Image Modality Detection and
                  Retrieval for the ImageCLEF 2010 Medical Retrieval Track},
  booktitle    = {{CLEF} 2010 LABs and Workshops, Notebook Papers, 22-23 September 2010,
                  Padua, Italy},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1176},
  publisher    = {CEUR-WS.org},
  year         = {2010},
  url          = {https://ceur-ws.org/Vol-1176/CLEF2010wn-ImageCLEF-SimpsonEt2010.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:37 +0100},
  biburl       = {https://dblp.org/rec/conf/clef/SimpsonRSDAT10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/drr/YouADRGT10,
  author       = {Daekeun You and
                  Sameer K. Antani and
                  Dina Demner{-}Fushman and
                  Md. Mahmudur Rahman and
                  Venu Govindaraju and
                  George R. Thoma},
  editor       = {Laurence Likforman{-}Sulem and
                  Gady Agam},
  title        = {Biomedical article retrieval using multimodal features and image annotations
                  in region-based {CBIR}},
  booktitle    = {Document Recognition and Retrieval XVII, part of the IS{\&}T-SPIE
                  Electronic Imaging Symposium, San Jose, CA, USA, January 19-21, 2010,
                  Proceedings},
  series       = {{SPIE} Proceedings},
  volume       = {7534},
  pages        = {75340V},
  publisher    = {{SPIE}},
  year         = {2010},
  url          = {https://doi.org/10.1117/12.838973},
  doi          = {10.1117/12.838973},
  timestamp    = {Fri, 02 Jun 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/drr/YouADRGT10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/BekhuisD10,
  author       = {Tanja Bekhuis and
                  Dina Demner{-}Fushman},
  editor       = {Charles Safran and
                  Shane R. Reti and
                  Heimar F. Marin},
  title        = {Towards Automating the Initial Screening Phase of a Systematic Review},
  booktitle    = {{MEDINFO} 2010 - Proceedings of the 13th World Congress on Medical
                  Informatics, Cape Town, South Africa, September 12-15, 2010},
  series       = {Studies in Health Technology and Informatics},
  volume       = {160},
  pages        = {146--150},
  publisher    = {{IOS} Press},
  year         = {2010},
  url          = {https://doi.org/10.3233/978-1-60750-588-4-146},
  doi          = {10.3233/978-1-60750-588-4-146},
  timestamp    = {Wed, 03 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/medinfo/BekhuisD10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/smbm/ApostolovaTD10,
  author       = {Emilia Apostolova and
                  Noriko Tomuro and
                  Dina Demner{-}Fushman},
  editor       = {Nigel Collier and
                  Udo Hahn and
                  Dietrich Rebholz{-}Schuhmann and
                  Fabio Rinaldi and
                  Sampo Pyysalo},
  title        = {Identifying contextual information in clinical texts: a study of two
                  domains},
  booktitle    = {Proceedings of the Fourth International Symposium for Semantic Mining
                  in Biomedicine, Cambridge, United Kingdom, October, 2010},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {714},
  publisher    = {CEUR-WS.org},
  year         = {2010},
  url          = {https://ceur-ws.org/Vol-714/ShortPaper01\_Apostolova.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:22:16 +0100},
  biburl       = {https://dblp.org/rec/conf/smbm/ApostolovaTD10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bionlp/2010,
  editor       = {K. Bretonnel Cohen and
                  Dina Demner{-}Fushman and
                  Sophia Ananiadou and
                  John Pestian and
                  Jun'ichi Tsujii and
                  Bonnie L. Webber},
  title        = {Proceedings of the 2010 Workshop on Biomedical Natural Language Processing,
                  BioNLP@ACL 2010, Uppsala, Sweden, July 15, 2010},
  publisher    = {Association for Computational Linguistics},
  year         = {2010},
  url          = {https://aclanthology.org/volumes/W10-19/},
  isbn         = {978-1-932432-73-2},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/2010.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/OverbyTD09,
  author       = {Casey Lynnette Overby and
                  Peter Tarczy{-}Hornoch and
                  Dina Demner{-}Fushman},
  title        = {The potential for automated question answering in the context of genomic
                  medicine: an assessment of existing resources and properties of answers},
  journal      = {{BMC} Bioinform.},
  volume       = {10},
  number       = {{S-9}},
  pages        = {8},
  year         = {2009},
  url          = {https://doi.org/10.1186/1471-2105-10-S9-S8},
  doi          = {10.1186/1471-2105-10-S9-S8},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/OverbyTD09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijmi/Demner-FushmanAST09,
  author       = {Dina Demner{-}Fushman and
                  Sameer K. Antani and
                  Matthew S. Simpson and
                  George R. Thoma},
  title        = {Annotation and retrieval of clinically relevant images},
  journal      = {Int. J. Medical Informatics},
  volume       = {78},
  number       = {12},
  pages        = {59--67},
  year         = {2009},
  url          = {https://doi.org/10.1016/j.ijmedinf.2009.05.003},
  doi          = {10.1016/J.IJMEDINF.2009.05.003},
  timestamp    = {Fri, 21 Feb 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/ijmi/Demner-FushmanAST09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/KilicogluDRWH09,
  author       = {Halil Kilicoglu and
                  Dina Demner{-}Fushman and
                  Thomas C. Rindflesch and
                  Nancy L. Wilczynski and
                  R. Brian Haynes},
  title        = {Viewpoint Paper: Towards Automatic Recognition of Scientifically Rigorous
                  Clinical Research Evidence},
  journal      = {J. Am. Medical Informatics Assoc.},
  volume       = {16},
  number       = {1},
  pages        = {25--31},
  year         = {2009},
  url          = {https://doi.org/10.1197/jamia.M2996},
  doi          = {10.1197/JAMIA.M2996},
  timestamp    = {Mon, 11 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jamia/KilicogluDRWH09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/Demner-FushmanCM09,
  author       = {Dina Demner{-}Fushman and
                  Wendy Webber Chapman and
                  Clement J. McDonald},
  title        = {What can natural language processing do for clinical decision support?},
  journal      = {J. Biomed. Informatics},
  volume       = {42},
  number       = {5},
  pages        = {760--772},
  year         = {2009},
  url          = {https://doi.org/10.1016/j.jbi.2009.08.007},
  doi          = {10.1016/J.JBI.2009.08.007},
  timestamp    = {Tue, 16 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jbi/Demner-FushmanCM09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/FiszmanDKR09,
  author       = {Marcelo Fiszman and
                  Dina Demner{-}Fushman and
                  Halil Kilicoglu and
                  Thomas C. Rindflesch},
  title        = {Automatic summarization of {MEDLINE} citations for evidence-based
                  medical treatment: {A} topic-oriented evaluation},
  journal      = {J. Biomed. Informatics},
  volume       = {42},
  number       = {5},
  pages        = {801--813},
  year         = {2009},
  url          = {https://doi.org/10.1016/j.jbi.2008.10.002},
  doi          = {10.1016/J.JBI.2008.10.002},
  timestamp    = {Tue, 16 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jbi/FiszmanDKR09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/clef/SimpsonRDAT09,
  author       = {Matthew S. Simpson and
                  Md. Mahmudur Rahman and
                  Dina Demner{-}Fushman and
                  Sameer K. Antani and
                  George R. Thoma},
  editor       = {Carol Peters and
                  Nicola Ferro},
  title        = {Text- and Content-based Approaches to Image Retrieval for the ImageCLEF
                  2009 Medical Retrieval Track},
  booktitle    = {Working Notes for {CLEF} 2009 Workshop co-located with the 13th European
                  Conference on Digital Libraries {(ECDL} 2009) , Corf{\`{u}}, Greece,
                  September 30 - October 2, 2009},
  series       = {{CEUR} Workshop Proceedings},
  volume       = {1175},
  publisher    = {CEUR-WS.org},
  year         = {2009},
  url          = {https://ceur-ws.org/Vol-1175/CLEF2009wn-ImageCLEF-SimpsonEt2009.pdf},
  timestamp    = {Fri, 10 Mar 2023 16:23:36 +0100},
  biburl       = {https://dblp.org/rec/conf/clef/SimpsonRDAT09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/drr/YouAADT09,
  author       = {Daekeun You and
                  Emilia Apostolova and
                  Sameer K. Antani and
                  Dina Demner{-}Fushman and
                  George R. Thoma},
  editor       = {Kathrin Berkner and
                  Laurence Likforman{-}Sulem},
  title        = {Figure content analysis for improved biomedical article retrieval},
  booktitle    = {Document Recognition and Retrieval XVI, part of the IS{\&}T-SPIE
                  Electronic Imaging Symposium, San Jose, CA, USA, January 20-22, 2009.
                  Proceedings},
  series       = {{SPIE} Proceedings},
  volume       = {7247},
  pages        = {72470V},
  publisher    = {{SPIE}},
  year         = {2009},
  url          = {https://doi.org/10.1117/12.805976},
  doi          = {10.1117/12.805976},
  timestamp    = {Fri, 02 Jun 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/drr/YouAADT09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eacl/SimpsonDSAT09,
  author       = {Matthew S. Simpson and
                  Dina Demner{-}Fushman and
                  Charles Sneiderman and
                  Sameer K. Antani and
                  George R. Thoma},
  editor       = {Alex Lascarides and
                  Claire Gardent and
                  Joakim Nivre},
  title        = {Using Non-Lexical Features to Identify Effective Indexing Terms for
                  Biomedical Illustrations},
  booktitle    = {{EACL} 2009, 12th Conference of the European Chapter of the Association
                  for Computational Linguistics, Proceedings of the Conference, Athens,
                  Greece, March 30 - April 3, 2009},
  pages        = {737--744},
  publisher    = {The Association for Computer Linguistics},
  year         = {2009},
  url          = {https://aclanthology.org/E09-1084/},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/eacl/SimpsonDSAT09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/RahmanALDT09,
  author       = {Md. Mahmudur Rahman and
                  Sameer K. Antani and
                  L. Rodney Long and
                  Dina Demner{-}Fushman and
                  George R. Thoma},
  editor       = {Barbara Caputo and
                  Henning M{\"{u}}ller and
                  Tanveer Fathima Syeda{-}Mahmood and
                  James S. Duncan and
                  Fei Wang and
                  Jayashree Kalpathy{-}Cramer},
  title        = {Multi-modal Query Expansion Based on Local Analysis for Medical Image
                  Retrieval},
  booktitle    = {Medical Content-Based Retrieval for Clinical Decision Support, First
                  {MICCAI} International Workshop, {MCBR-CDS} 2009, London, UK, September
                  20, 2009, Revised Selected Papers},
  series       = {Lecture Notes in Computer Science},
  volume       = {5853},
  pages        = {110--119},
  publisher    = {Springer},
  year         = {2009},
  url          = {https://doi.org/10.1007/978-3-642-11769-5\_11},
  doi          = {10.1007/978-3-642-11769-5\_11},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/miccai/RahmanALDT09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/naacl/ApostolovaD09,
  author       = {Emilia Apostolova and
                  Dina Demner{-}Fushman},
  title        = {Towards Automatic Image Region Annotation - Image Region Textual Coreference
                  Resolution},
  booktitle    = {Human Language Technologies: Conference of the North American Chapter
                  of the Association of Computational Linguistics, Proceedings, May
                  31 - June 5, 2009, Boulder, Colorado, USA, Short Papers},
  pages        = {41--44},
  publisher    = {The Association for Computational Linguistics},
  year         = {2009},
  url          = {https://aclanthology.org/N09-2011/},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/naacl/ApostolovaD09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bionlp/2009,
  editor       = {Kevin Bretonnel Cohen and
                  Dina Demner{-}Fushman and
                  Sophia Ananiadou and
                  John Pestian and
                  Jun'ichi Tsujii and
                  Bonnie L. Webber},
  title        = {Proceedings of the BioNLP Workshop, BioNLP@HLT-NAACL 2009, Boulder,
                  Colorado, USA, June 4-5, 2009},
  publisher    = {Association for Computational Linguistics},
  year         = {2009},
  url          = {https://aclanthology.org/volumes/W09-13/},
  isbn         = {978-1-932432-30-5},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/2009.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/Demner-FushmanACPTW08,
  author       = {Dina Demner{-}Fushman and
                  Sophia Ananiadou and
                  K. Bretonnel Cohen and
                  John Pestian and
                  Jun'ichi Tsujii and
                  Bonnie L. Webber},
  title        = {Themes in biomedical natural language processing: BioNLP08},
  journal      = {{BMC} Bioinform.},
  volume       = {9},
  number       = {{S-11}},
  year         = {2008},
  url          = {https://doi.org/10.1186/1471-2105-9-S11-S1},
  doi          = {10.1186/1471-2105-9-S11-S1},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/Demner-FushmanACPTW08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/acl/Demner-Fushman08,
  author       = {Dina Demner{-}Fushman},
  editor       = {K. Bretonnel Cohen and
                  Bob Carpenter},
  title        = {Adapting Naturally Occurring Test Suites for Evaluation of Clinical
                  Question Answering},
  booktitle    = {Software Engineering, Testing, and Quality Assurance for Natural Language
                  Processing@ACL 2008, Columbus, Ohio, USA, June 20, 2008},
  pages        = {21--22},
  publisher    = {Association for Computational Linguistics},
  year         = {2008},
  url          = {https://aclanthology.org/W08-0505/},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/acl/Demner-Fushman08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/AronsonMNSD08,
  author       = {Alan R. Aronson and
                  James G. Mork and
                  Aur{\'{e}}lie N{\'{e}}v{\'{e}}ol and
                  Sonya E. Shooshan and
                  Dina Demner{-}Fushman},
  title        = {Methodology for Creating {UMLS} Content Views Appropriate for Biomedical
                  Natural Language Processing},
  booktitle    = {{AMIA} 2008, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 8-12, 2008},
  publisher    = {{AMIA}},
  year         = {2008},
  url          = {https://knowledge.amia.org/amia-55142-a2008a-1.625176/t-001-1.626020/f-001-1.626021/a-004-1.626520/a-005-1.626517},
  timestamp    = {Wed, 04 Aug 2021 11:13:10 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/AronsonMNSD08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/Demner-FushmanSFHCT08,
  author       = {Dina Demner{-}Fushman and
                  Charlotte A. Seckman and
                  Cheryl Fisher and
                  Susan E. Hauser and
                  Jennifer Clayton and
                  George R. Thoma},
  title        = {A Prototype System to Support Evidence-based Practice},
  booktitle    = {{AMIA} 2008, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 8-12, 2008},
  publisher    = {{AMIA}},
  year         = {2008},
  url          = {https://knowledge.amia.org/amia-55142-a2008a-1.625176/t-002-1.625979/f-001-1.625980/a-030-1.626011/a-031-1.626008},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/Demner-FushmanSFHCT08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/KilicogluDRWH08,
  author       = {Halil Kilicoglu and
                  Dina Demner{-}Fushman and
                  Thomas C. Rindflesch and
                  Nancy L. Wilczynski and
                  R. Brian Haynes},
  title        = {Toward Automatic Recognition of High Quality Clinical Evidence},
  booktitle    = {{AMIA} 2008, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 8-12, 2008},
  publisher    = {{AMIA}},
  year         = {2008},
  url          = {https://knowledge.amia.org/amia-55142-a2008a-1.625176/t-001-1.626020/f-001-1.626021/a-075-1.626339/a-076-1.626336},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/KilicogluDRWH08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/drr/AntaniDLST08,
  author       = {Sameer K. Antani and
                  Dina Demner{-}Fushman and
                  Jiang Li and
                  Balaji Vasan Srinivasan and
                  George R. Thoma},
  editor       = {Berrin A. Yanikoglu and
                  Kathrin Berkner},
  title        = {Exploring use of images in clinical articles for decision support
                  in evidence-based medicine},
  booktitle    = {Document Recognition and Retrieval XV, part of the IS{\&}T-SPIE
                  Electronic Imaging Symposium, San Jose, CA, USA, January 29-31, 2008.
                  Proceedings},
  series       = {{SPIE} Proceedings},
  volume       = {6815},
  pages        = {68150Q},
  publisher    = {{SPIE}},
  year         = {2008},
  url          = {https://doi.org/10.1117/12.766778},
  doi          = {10.1117/12.766778},
  timestamp    = {Fri, 02 Jun 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/drr/AntaniDLST08.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bionlp/2008,
  editor       = {Dina Demner{-}Fushman and
                  Sophia Ananiadou and
                  Kevin Bretonnel Cohen and
                  John Pestian and
                  Jun'ichi Tsujii and
                  Bonnie L. Webber},
  title        = {Proceedings of the Workshop on Current Trends in Biomedical Natural
                  Language Processing, BioNLP 2008, Columbus, Ohio, USA, June 19, 2008},
  publisher    = {Association for Computational Linguistics},
  year         = {2008},
  url          = {https://aclanthology.org/volumes/W08-06/},
  isbn         = {978-1-932432-11-4},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/2008.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ZweigenbaumDYC07,
  author       = {Pierre Zweigenbaum and
                  Dina Demner{-}Fushman and
                  Hong Yu and
                  Kevin Bretonnel Cohen},
  title        = {Frontiers of biomedical text mining: current progress},
  journal      = {Briefings Bioinform.},
  volume       = {8},
  number       = {5},
  pages        = {358--375},
  year         = {2007},
  url          = {https://doi.org/10.1093/bib/bbm045},
  doi          = {10.1093/BIB/BBM045},
  timestamp    = {Thu, 04 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bib/ZweigenbaumDYC07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/coling/Demner-FushmanL07,
  author       = {Dina Demner{-}Fushman and
                  Jimmy Lin},
  title        = {Answering Clinical Questions with Knowledge-Based and Statistical
                  Techniques},
  journal      = {Comput. Linguistics},
  volume       = {33},
  number       = {1},
  pages        = {63--103},
  year         = {2007},
  url          = {https://doi.org/10.1162/coli.2007.33.1.63},
  doi          = {10.1162/COLI.2007.33.1.63},
  timestamp    = {Fri, 27 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/coling/Demner-FushmanL07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/IdeLD07,
  author       = {Nicholas C. Ide and
                  Russell F. Loane and
                  Dina Demner{-}Fushman},
  title        = {Application of Information Technology: Essie: {A} Concept-based Search
                  Engine for Structured Biomedical Text},
  journal      = {J. Am. Medical Informatics Assoc.},
  volume       = {14},
  number       = {3},
  pages        = {253--263},
  year         = {2007},
  url          = {https://doi.org/10.1197/jamia.M2233},
  doi          = {10.1197/JAMIA.M2233},
  timestamp    = {Mon, 11 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jamia/IdeLD07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/SneidermanDFIR07,
  author       = {Charles Sneiderman and
                  Dina Demner{-}Fushman and
                  Marcelo Fiszman and
                  Nicholas C. Ide and
                  Thomas C. Rindflesch},
  title        = {Research Paper: Knowledge-based Methods to Help Clinicians Find Answers
                  in {MEDLINE}},
  journal      = {J. Am. Medical Informatics Assoc.},
  volume       = {14},
  number       = {6},
  pages        = {772--780},
  year         = {2007},
  url          = {https://doi.org/10.1197/jamia.M2407},
  doi          = {10.1197/JAMIA.M2407},
  timestamp    = {Mon, 11 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jamia/SneidermanDFIR07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/HauserDJHFT07,
  author       = {Susan E. Hauser and
                  Dina Demner{-}Fushman and
                  Joshua L. Jacobs and
                  Susanne M. Humphrey and
                  Glenn Ford and
                  George R. Thoma},
  title        = {Research Paper: Using Wireless Handheld Computers to Seek Information
                  at the Point of Care: An Evaluation by Clinicians},
  journal      = {J. Am. Medical Informatics Assoc.},
  volume       = {14},
  number       = {6},
  pages        = {807--815},
  year         = {2007},
  url          = {https://doi.org/10.1197/jamia.M2424},
  doi          = {10.1197/JAMIA.M2424},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jamia/HauserDJHFT07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/LinD07,
  author       = {Jimmy Lin and
                  Dina Demner{-}Fushman},
  title        = {Semantic Clustering of Answers to Clinical Questions},
  booktitle    = {{AMIA} 2007, American Medical Informatics Association Annual Symposium,
                  Chicago, IL, USA, November 10-14, 2007},
  publisher    = {{AMIA}},
  year         = {2007},
  url          = {https://knowledge.amia.org/amia-55142-a2007a-1.623841/t-001-1.624626/f-001-1.624627/a-086-1.624870/a-087-1.624867},
  timestamp    = {Fri, 27 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/LinD07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bionlp/AronsonBDFLMNPR07,
  author       = {Alan R. Aronson and
                  Olivier Bodenreider and
                  Dina Demner{-}Fushman and
                  Kin Wah Fung and
                  Vivian K. Lee and
                  James G. Mork and
                  Aur{\'{e}}lie N{\'{e}}v{\'{e}}ol and
                  Lee B. Peters and
                  Willie J. Rogers},
  editor       = {K. Bretonnel Cohen and
                  Dina Demner{-}Fushman and
                  Carol Friedman and
                  Lynette Hirschman and
                  John Pestian},
  title        = {From indexing the biomedical literature to coding clinical text: experience
                  with {MTI} and machine learning approaches},
  booktitle    = {Biological, translational, and clinical language processing, BioNLP@ACL
                  2007, Prague, Czech Republic, June 29, 2007},
  pages        = {105--112},
  publisher    = {Association for Computational Linguistics},
  year         = {2007},
  url          = {https://aclanthology.org/W07-1014/},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/AronsonBDFLMNPR07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bionlp/FiszmanDLGR07,
  author       = {Marcelo Fiszman and
                  Dina Demner{-}Fushman and
                  Fran{\c{c}}ois{-}Michel Lang and
                  Philip Goetz and
                  Thomas C. Rindflesch},
  editor       = {K. Bretonnel Cohen and
                  Dina Demner{-}Fushman and
                  Carol Friedman and
                  Lynette Hirschman and
                  John Pestian},
  title        = {Interpreting comparative constructions in biomedical text},
  booktitle    = {Biological, translational, and clinical language processing, BioNLP@ACL
                  2007, Prague, Czech Republic, June 29, 2007},
  pages        = {137--144},
  publisher    = {Association for Computational Linguistics},
  year         = {2007},
  url          = {https://aclanthology.org/W07-1018/},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/FiszmanDLGR07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icdm/Demner-FushmanASSFE07,
  author       = {Dina Demner{-}Fushman and
                  Sameer K. Antani and
                  Mohammad{-}Reza Siadat and
                  Hamid Soltanian{-}Zadeh and
                  Farshad Fotouhi and
                  Kost V. Elisevich},
  title        = {Automatically Finding Images for Clinical Decision Support},
  booktitle    = {Workshops Proceedings of the 7th {IEEE} International Conference on
                  Data Mining {(ICDM} 2007), October 28-31, 2007, Omaha, Nebraska, {USA}},
  pages        = {139--144},
  publisher    = {{IEEE} Computer Society},
  year         = {2007},
  url          = {https://doi.org/10.1109/ICDMW.2007.12},
  doi          = {10.1109/ICDMW.2007.12},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/icdm/Demner-FushmanASSFE07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/ZweigenbaumDYC07,
  author       = {Pierre Zweigenbaum and
                  Dina Demner{-}Fushman and
                  Hong Yu and
                  K. Bretonnel Cohen},
  editor       = {Russ B. Altman and
                  A. Keith Dunker and
                  Lawrence Hunter and
                  Tiffany Murray and
                  Teri E. Klein},
  title        = {Session Introduction},
  booktitle    = {Biocomputing 2007, Proceedings of the Pacific Symposium, Maui, Hawaii,
                  USA, 3-7 January 2007},
  pages        = {205--208},
  publisher    = {World Scientific},
  year         = {2007},
  url          = {http://psb.stanford.edu/psb-online/proceedings/psb07/intro-nlp.pdf},
  timestamp    = {Sun, 22 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/psb/ZweigenbaumDYC07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/AhlersFDLR07,
  author       = {Caroline B. Ahlers and
                  Marcelo Fiszman and
                  Dina Demner{-}Fushman and
                  Fran{\c{c}}ois{-}Michel Lang and
                  Thomas C. Rindflesch},
  editor       = {Russ B. Altman and
                  A. Keith Dunker and
                  Lawrence Hunter and
                  Tiffany Murray and
                  Teri E. Klein},
  title        = {Extracting Semantic Predications from Medline Citations for Pharmacogenomics},
  booktitle    = {Biocomputing 2007, Proceedings of the Pacific Symposium, Maui, Hawaii,
                  USA, 3-7 January 2007},
  pages        = {209--220},
  publisher    = {World Scientific},
  year         = {2007},
  url          = {http://psb.stanford.edu/psb-online/proceedings/psb07/ahlers.pdf},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/psb/AhlersFDLR07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/trec/Demner-FushmanHILMRRSWA07,
  author       = {Dina Demner{-}Fushman and
                  Susanne M. Humphrey and
                  Nicholas C. Ide and
                  Russell F. Loane and
                  James G. Mork and
                  Patrick Ruch and
                  Miguel E. Ruiz and
                  Lawrence H. Smith and
                  W. John Wilbur and
                  Alan R. Aronson},
  editor       = {Ellen M. Voorhees and
                  Lori P. Buckland},
  title        = {Combining Resources to Find Answers to Biomedical Questions},
  booktitle    = {Proceedings of The Sixteenth Text REtrieval Conference, {TREC} 2007,
                  Gaithersburg, Maryland, USA, November 5-9, 2007},
  series       = {{NIST} Special Publication},
  volume       = {500-274},
  publisher    = {National Institute of Standards and Technology {(NIST)}},
  year         = {2007},
  url          = {http://trec.nist.gov/pubs/trec16/papers/nlm.geo.final.pdf},
  timestamp    = {Wed, 07 Jul 2021 16:44:22 +0200},
  biburl       = {https://dblp.org/rec/conf/trec/Demner-FushmanHILMRRSWA07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bionlp/2007,
  editor       = {K. Bretonnel Cohen and
                  Dina Demner{-}Fushman and
                  Carol Friedman and
                  Lynette Hirschman and
                  John Pestian},
  title        = {Biological, translational, and clinical language processing, BioNLP@ACL
                  2007, Prague, Czech Republic, June 29, 2007},
  publisher    = {Association for Computational Linguistics},
  year         = {2007},
  url          = {https://aclanthology.org/volumes/W07-10/},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/bionlp/2007.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ir/LinD06,
  author       = {Jimmy Lin and
                  Dina Demner{-}Fushman},
  title        = {Methods for automatically evaluating answers to complex questions},
  journal      = {Inf. Retr.},
  volume       = {9},
  number       = {5},
  pages        = {565--587},
  year         = {2006},
  url          = {https://doi.org/10.1007/s10791-006-9003-7},
  doi          = {10.1007/S10791-006-9003-7},
  timestamp    = {Fri, 27 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ir/LinD06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/Demner-FushmanFHT06,
  author       = {Dina Demner{-}Fushman and
                  Barbara Few and
                  Susan E. Hauser and
                  George R. Thoma},
  title        = {Research Paper: Automatically Identifying Health Outcome Information
                  in {MEDLINE} Records},
  journal      = {J. Am. Medical Informatics Assoc.},
  volume       = {13},
  number       = {1},
  pages        = {52--60},
  year         = {2006},
  url          = {https://doi.org/10.1197/jamia.M1911},
  doi          = {10.1197/JAMIA.M1911},
  timestamp    = {Mon, 11 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jamia/Demner-FushmanFHT06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jasis/HumphreyRKDR06,
  author       = {Susanne M. Humphrey and
                  Willie J. Rogers and
                  Halil Kilicoglu and
                  Dina Demner{-}Fushman and
                  Thomas C. Rindflesch},
  title        = {Word sense disambiguation by selecting the best semantic type based
                  on Journal Descriptor Indexing: Preliminary experiment},
  journal      = {J. Assoc. Inf. Sci. Technol.},
  volume       = {57},
  number       = {1},
  pages        = {96--113},
  year         = {2006},
  url          = {https://doi.org/10.1002/asi.20257},
  doi          = {10.1002/ASI.20257},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jasis/HumphreyRKDR06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/acl/Demner-FushmanL06,
  author       = {Dina Demner{-}Fushman and
                  Jimmy Lin},
  editor       = {Nicoletta Calzolari and
                  Claire Cardie and
                  Pierre Isabelle},
  title        = {Answer Extraction, Semantic Clustering, and Extractive Summarization
                  for Clinical Question Answering},
  booktitle    = {{ACL} 2006, 21st International Conference on Computational Linguistics
                  and 44th Annual Meeting of the Association for Computational Linguistics,
                  Proceedings of the Conference, Sydney, Australia, 17-21 July 2006},
  publisher    = {The Association for Computer Linguistics},
  year         = {2006},
  url          = {https://aclanthology.org/P06-1106/},
  doi          = {10.3115/1220175.1220281},
  timestamp    = {Fri, 27 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/acl/Demner-FushmanL06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/Demner-FushmanHHFJT06,
  author       = {Dina Demner{-}Fushman and
                  Susan E. Hauser and
                  Susanne M. Humphrey and
                  Glenn Ford and
                  Joshua L. Jacobs and
                  George R. Thoma},
  title        = {{MEDLINE} as a Source of Just-in-Time Answers to Clinical Questions},
  booktitle    = {{AMIA} 2006, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 11-15, 2006},
  publisher    = {{AMIA}},
  year         = {2006},
  url          = {https://knowledge.amia.org/amia-55142-a2006a-1.620145/t-001-1.623243/f-001-1.623244/a-038-1.623634/a-039-1.623631},
  timestamp    = {Wed, 04 Aug 2021 11:13:11 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/Demner-FushmanHHFJT06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/HauserDFJT06,
  author       = {Susan E. Hauser and
                  Dina Demner{-}Fushman and
                  Glenn Ford and
                  Joshua L. Jacobs and
                  George R. Thoma},
  title        = {Preliminary Comparison of Three Search Engines for Point of Care Access
                  to MEDLINE\({}^{\mbox{{\textregistered}}}\) Citations},
  booktitle    = {{AMIA} 2006, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 11-15, 2006},
  publisher    = {{AMIA}},
  year         = {2006},
  url          = {https://knowledge.amia.org/amia-55142-a2006a-1.620145/t-002-1.622268/f-001-1.622269/a-273-1.622924/a-274-1.622921},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/HauserDFJT06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/HuangLD06,
  author       = {Xiaoli Huang and
                  Jimmy Lin and
                  Dina Demner{-}Fushman},
  title        = {Evaluation of {PICO} as a Knowledge Representation for Clinical Questions},
  booktitle    = {{AMIA} 2006, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 11-15, 2006},
  publisher    = {{AMIA}},
  year         = {2006},
  url          = {https://knowledge.amia.org/amia-55142-a2006a-1.620145/t-001-1.623243/f-001-1.623244/a-072-1.623532/a-073-1.623529},
  timestamp    = {Fri, 27 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/HuangLD06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/SneidermanDFRLNR06,
  author       = {Charles Sneiderman and
                  Dina Demner{-}Fushman and
                  Marcelo Fiszman and
                  Graciela Rosemblat and
                  Fran{\c{c}}ois{-}Michel Lang and
                  Daphne Norwood and
                  Thomas C. Rindflesch},
  title        = {Semantic Processing to Enhance Retrieval of Diagnosis Citations from
                  Medline},
  booktitle    = {{AMIA} 2006, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, November 11-15, 2006},
  publisher    = {{AMIA}},
  year         = {2006},
  url          = {https://knowledge.amia.org/amia-55142-a2006a-1.620145/t-002-1.622268/f-001-1.622269/a-432-1.622444/a-433-1.622441},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/SneidermanDFRLNR06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bionlp/LinKDK06,
  author       = {Jimmy Lin and
                  Damianos G. Karakos and
                  Dina Demner{-}Fushman and
                  Sanjeev Khudanpur},
  editor       = {Karin Verspoor and
                  Kevin Bretonnel Cohen and
                  Ben Goertzel and
                  Inderjeet Mani},
  title        = {Generative Content Models for Structural Analysis of Medical Abstracts},
  booktitle    = {Proceedings of the Workshop on Linking Natural Language and Biology,
                  BioNLP@NAACL-HLT 2006, New York, NY, USA, June 8, 2006},
  pages        = {65--72},
  publisher    = {Association for Computational Linguistics},
  year         = {2006},
  url          = {https://aclanthology.org/W06-3309/},
  timestamp    = {Thu, 17 Feb 2022 16:43:16 +0100},
  biburl       = {https://dblp.org/rec/conf/bionlp/LinKDK06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/naacl/LinD06,
  author       = {Jimmy Lin and
                  Dina Demner{-}Fushman},
  editor       = {Robert C. Moore and
                  Jeff A. Bilmes and
                  Jennifer Chu{-}Carroll and
                  Mark Sanderson},
  title        = {Will Pyramids Built of Nuggets Topple Over?},
  booktitle    = {Human Language Technology Conference of the North American Chapter
                  of the Association of Computational Linguistics, Proceedings, June
                  4-9, 2006, New York, New York, {USA}},
  publisher    = {The Association for Computational Linguistics},
  year         = {2006},
  url          = {https://aclanthology.org/N06-1049/},
  timestamp    = {Fri, 27 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/naacl/LinD06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sigir/LinD06,
  author       = {Jimmy Lin and
                  Dina Demner{-}Fushman},
  editor       = {Efthimis N. Efthimiadis and
                  Susan T. Dumais and
                  David Hawking and
                  Kalervo J{\"{a}}rvelin},
  title        = {The role of knowledge in conceptual retrieval: a study in the domain
                  of clinical medicine},
  booktitle    = {{SIGIR} 2006: Proceedings of the 29th Annual International {ACM} {SIGIR}
                  Conference on Research and Development in Information Retrieval, Seattle,
                  Washington, USA, August 6-11, 2006},
  pages        = {99--106},
  publisher    = {{ACM}},
  year         = {2006},
  url          = {https://doi.org/10.1145/1148170.1148191},
  doi          = {10.1145/1148170.1148191},
  timestamp    = {Fri, 27 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/sigir/LinD06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sigir/LinWDA06,
  author       = {Jimmy Lin and
                  Philip Fei Wu and
                  Dina Demner{-}Fushman and
                  Eileen G. Abels},
  editor       = {Efthimis N. Efthimiadis and
                  Susan T. Dumais and
                  David Hawking and
                  Kalervo J{\"{a}}rvelin},
  title        = {Exploring the limits of single-iteration clarification dialogs},
  booktitle    = {{SIGIR} 2006: Proceedings of the 29th Annual International {ACM} {SIGIR}
                  Conference on Research and Development in Information Retrieval, Seattle,
                  Washington, USA, August 6-11, 2006},
  pages        = {469--476},
  publisher    = {{ACM}},
  year         = {2006},
  url          = {https://doi.org/10.1145/1148170.1148251},
  doi          = {10.1145/1148170.1148251},
  timestamp    = {Sat, 29 Jul 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/sigir/LinWDA06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/trec/Demner-FushmanHILSTWADRR06,
  author       = {Dina Demner{-}Fushman and
                  Susanne M. Humphrey and
                  Nicholas C. Ide and
                  Russell F. Loane and
                  Patrick Ruch and
                  Miguel E. Ruiz and
                  Lawrence H. Smith and
                  Lorraine K. Tanabe and
                  W. John Wilbur and
                  Alan R. Aronson},
  editor       = {Ellen M. Voorhees and
                  Lori P. Buckland},
  title        = {Finding Relevant Passages in Scientific Articles: Fusion of Automatic
                  Approaches vs. an Interactive Team Effort},
  booktitle    = {Proceedings of the Fifteenth Text REtrieval Conference, {TREC} 2006,
                  Gaithersburg, Maryland, USA, November 14-17, 2006},
  series       = {{NIST} Special Publication},
  volume       = {500-272},
  publisher    = {National Institute of Standards and Technology {(NIST)}},
  year         = {2006},
  url          = {http://trec.nist.gov/pubs/trec15/papers/nlm.geo.final.pdf},
  timestamp    = {Wed, 07 Jul 2021 16:44:22 +0200},
  biburl       = {https://dblp.org/rec/conf/trec/Demner-FushmanHILSTWADRR06.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/acl/LinD05,
  author       = {Jimmy Lin and
                  Dina Demner{-}Fushman},
  editor       = {Jade Goldstein and
                  Alon Lavie and
                  Chin{-}Yew Lin and
                  Clare R. Voss},
  title        = {Evaluating Summaries and Answers: Two Sides of the Same Coin?},
  booktitle    = {Proceedings of the Workshop on Intrinsic and Extrinsic Evaluation
                  Measures for Machine Translation and/or Summarization@ACL 2005, Ann
                  Arbor, Michigan, USA, June 29, 2005},
  pages        = {41--48},
  publisher    = {Association for Computational Linguistics},
  year         = {2005},
  url          = {https://aclanthology.org/W05-0906/},
  timestamp    = {Fri, 06 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/acl/LinD05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/Demner-FushmanHT05,
  author       = {Dina Demner{-}Fushman and
                  Susan E. Hauser and
                  George R. Thoma},
  title        = {The Role of Title, Metadata and Abstract in Identifying Clinically
                  Relevant Journal Articles},
  booktitle    = {{AMIA} 2005, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, October 22-26, 2005},
  publisher    = {{AMIA}},
  year         = {2005},
  url          = {https://knowledge.amia.org/amia-55142-a2005a-1.613296/t-001-1.616182/f-001-1.616183/a-038-1.616576/a-039-1.616573},
  timestamp    = {Wed, 04 Aug 2021 11:13:04 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/Demner-FushmanHT05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/LinD05,
  author       = {Jimmy Lin and
                  Dina Demner{-}Fushman},
  title        = {"Bag of Words" is not enough for Strength of Evidence Classification},
  booktitle    = {{AMIA} 2005, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, October 22-26, 2005},
  publisher    = {{AMIA}},
  year         = {2005},
  url          = {https://knowledge.amia.org/amia-55142-a2005a-1.613296/t-002-1.615605/f-001-1.615606/a-328-1.615697/a-329-1.615694},
  timestamp    = {Fri, 27 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/LinD05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/SneidermanDFR05,
  author       = {Charles Sneiderman and
                  Dina Demner{-}Fushman and
                  Marcelo Fiszman and
                  Thomas C. Rindflesch},
  title        = {Semantic characteristics of {MEDLINE} citations useful for therapeutic
                  decision-making},
  booktitle    = {{AMIA} 2005, American Medical Informatics Association Annual Symposium,
                  Washington, DC, USA, October 22-26, 2005},
  publisher    = {{AMIA}},
  year         = {2005},
  url          = {https://knowledge.amia.org/amia-55142-a2005a-1.613296/t-003-1.615259/f-001-1.615260/a-414-1.615436/a-415-1.615433},
  timestamp    = {Wed, 04 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/amia/SneidermanDFR05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/naacl/LinD05,
  author       = {Jimmy Lin and
                  Dina Demner{-}Fushman},
  title        = {Automatically Evaluating Answers to Definition Questions},
  booktitle    = {{HLT/EMNLP} 2005, Human Language Technology Conference and Conference
                  on Empirical Methods in Natural Language Processing, Proceedings of
                  the Conference, 6-8 October 2005, Vancouver, British Columbia, Canada},
  pages        = {931--938},
  publisher    = {The Association for Computational Linguistics},
  year         = {2005},
  url          = {https://aclanthology.org/H05-1117/},
  timestamp    = {Fri, 27 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/naacl/LinD05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/trec/AronsonDHLRRSTWL05,
  author       = {Alan R. Aronson and
                  Dina Demner{-}Fushman and
                  Susanne M. Humphrey and
                  Jimmy Lin and
                  Patrick Ruch and
                  Miguel E. Ruiz and
                  Lawrence H. Smith and
                  Lorraine K. Tanabe and
                  W. John Wilbur and
                  Hongfang Liu},
  editor       = {Ellen M. Voorhees and
                  Lori P. Buckland},
  title        = {Fusion of Knowledge-Intensive and Statistical Approaches for Retrieving
                  and Annotating Textual Genomics Documents},
  booktitle    = {Proceedings of the Fourteenth Text REtrieval Conference, {TREC} 2005,
                  Gaithersburg, Maryland, USA, November 15-18, 2005},
  series       = {{NIST} Special Publication},
  volume       = {500-266},
  publisher    = {National Institute of Standards and Technology {(NIST)}},
  year         = {2005},
  url          = {http://trec.nist.gov/pubs/trec14/papers/nlm-umd.geo.pdf},
  timestamp    = {Fri, 27 Aug 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/trec/AronsonDHLRRSTWL05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/trec/LinADOWW05,
  author       = {Jimmy Lin and
                  Eileen G. Abels and
                  Dina Demner{-}Fushman and
                  Douglas W. Oard and
                  Philip Fei Wu and
                  Yejun Wu},
  editor       = {Ellen M. Voorhees and
                  Lori P. Buckland},
  title        = {A Menagerie of Tracks at Maryland: HARD, Enterprise, QA, and Genomics,
                  Oh My!},
  booktitle    = {Proceedings of the Fourteenth Text REtrieval Conference, {TREC} 2005,
                  Gaithersburg, Maryland, USA, November 15-18, 2005},
  series       = {{NIST} Special Publication},
  volume       = {500-266},
  publisher    = {National Institute of Standards and Technology {(NIST)}},
  year         = {2005},
  url          = {http://trec.nist.gov/pubs/trec14/papers/umaryland-lin.hard.ent.qa.geo.pdf},
  timestamp    = {Sat, 29 Jul 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/trec/LinADOWW05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cbms/HauserDFT04,
  author       = {Susan E. Hauser and
                  Dina Demner{-}Fushman and
                  Glenn Ford and
                  George R. Thoma},
  title        = {A Testbed System for Mobile Point-of-Care Information Delivery},
  booktitle    = {17th {IEEE} Symposium on Computer-Based Medical Systems {(CBMS} 2004),
                  24-25 June 2004, Bethesda, MD, {USA}},
  pages        = {147--152},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CBMS.2004.1311706},
  doi          = {10.1109/CBMS.2004.1311706},
  timestamp    = {Fri, 24 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/cbms/HauserDFT04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/Demner-FushmanH04,
  author       = {Dina Demner{-}Fushman and
                  Susan E. Hauser and
                  Glenn Ford and
                  George R. Thoma},
  editor       = {Marius Fieschi and
                  Enrico W. Coiera and
                  Yu{-}Chuan (Jack) Li},
  title        = {Organizing Literature Information for Clinical Decision Support},
  booktitle    = {{MEDINFO} 2004 - Proceedings of the 11th World Congress on Medical
                  Informatics, San Francisco, California, USA, September 7-11, 2004},
  series       = {Studies in Health Technology and Informatics},
  volume       = {107},
  pages        = {602--606},
  publisher    = {{IOS} Press},
  year         = {2004},
  url          = {https://doi.org/10.3233/978-1-60750-949-3-602},
  doi          = {10.3233/978-1-60750-949-3-602},
  timestamp    = {Wed, 17 Aug 2022 16:35:51 +0200},
  biburl       = {https://dblp.org/rec/conf/medinfo/Demner-FushmanH04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/AlexanderHSFD04,
  author       = {Gregory L. Alexander and
                  Susan E. Hauser and
                  Karen Steely and
                  Glenn Ford and
                  Dina Demner{-}Fushman},
  editor       = {Marius Fieschi and
                  Enrico W. Coiera and
                  Yu{-}Chuan (Jack) Li},
  title        = {A Usability Study of the PubMed on Tap User Interface for PDAs},
  booktitle    = {{MEDINFO} 2004 - Proceedings of the 11th World Congress on Medical
                  Informatics, San Francisco, California, USA, September 7-11, 2004},
  series       = {Studies in Health Technology and Informatics},
  volume       = {107},
  pages        = {1411--1415},
  publisher    = {{IOS} Press},
  year         = {2004},
  url          = {https://doi.org/10.3233/978-1-60750-949-3-1411},
  doi          = {10.3233/978-1-60750-949-3-1411},
  timestamp    = {Wed, 03 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/medinfo/AlexanderHSFD04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/medinfo/HauserDFT04,
  author       = {Susan E. Hauser and
                  Dina Demner{-}Fushman and
                  Glenn Ford and
                  George R. Thoma},
  editor       = {Marius Fieschi and
                  Enrico W. Coiera and
                  Yu{-}Chuan (Jack) Li},
  title        = {PubMed on Tap: Discovering Design Principles for Online Information
                  Delivery to Handheld Computers},
  booktitle    = {{MEDINFO} 2004 - Proceedings of the 11th World Congress on Medical
                  Informatics, San Francisco, California, USA, September 7-11, 2004},
  series       = {Studies in Health Technology and Informatics},
  volume       = {107},
  pages        = {1430--1433},
  publisher    = {{IOS} Press},
  year         = {2004},
  url          = {https://doi.org/10.3233/978-1-60750-949-3-1430},
  doi          = {10.3233/978-1-60750-949-3-1430},
  timestamp    = {Wed, 03 Feb 2021 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/medinfo/HauserDFT04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/trec/AronsonHIKLMSTWXDL04,
  author       = {Alan R. Aronson and
                  Susanne M. Humphrey and
                  Nicholas C. Ide and
                  Won Kim and
                  Russell F. Loane and
                  James G. Mork and
                  Lawrence H. Smith and
                  Lorraine K. Tanabe and
                  W. John Wilbur and
                  Natalie Xie and
                  Dina Demner{-}Fushman and
                  Hongfang Liu},
  editor       = {Ellen M. Voorhees and
                  Lori P. Buckland},
  title        = {Knowledge-Intensive and Statistical Approaches to the Retrieval and
                  Annotation of Genomics {MEDLINE} Citations},
  booktitle    = {Proceedings of the Thirteenth Text REtrieval Conference, {TREC} 2004,
                  Gaithersburg, Maryland, USA, November 16-19, 2004},
  series       = {{NIST} Special Publication},
  volume       = {500-261},
  publisher    = {National Institute of Standards and Technology {(NIST)}},
  year         = {2004},
  url          = {http://trec.nist.gov/pubs/trec13/papers/nlm-umd-ul.geo.pdf},
  timestamp    = {Wed, 07 Jul 2021 16:44:22 +0200},
  biburl       = {https://dblp.org/rec/conf/trec/AronsonHIKLMSTWXDL04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/trec/HeDOKK04,
  author       = {Daqing He and
                  Dina Demner{-}Fushman and
                  Douglas W. Oard and
                  Damianos G. Karakos and
                  Sanjeev Khudanpur},
  editor       = {Ellen M. Voorhees and
                  Lori P. Buckland},
  title        = {Improving Passage Retrieval Using Interactive Elicition and Statistical
                  Modeling},
  booktitle    = {Proceedings of the Thirteenth Text REtrieval Conference, {TREC} 2004,
                  Gaithersburg, Maryland, USA, November 16-19, 2004},
  series       = {{NIST} Special Publication},
  volume       = {500-261},
  publisher    = {National Institute of Standards and Technology {(NIST)}},
  year         = {2004},
  url          = {http://trec.nist.gov/pubs/trec13/papers/umd-jhu.hard.pdf},
  timestamp    = {Sun, 22 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/trec/HeDOKK04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/talip/HeOWLDDRKNSL03,
  author       = {Daqing He and
                  Douglas W. Oard and
                  Jianqiang Wang and
                  Jun Luo and
                  Dina Demner{-}Fushman and
                  Kareem Darwish and
                  Philip Resnik and
                  Sanjeev Khudanpur and
                  Michael Nossal and
                  Michael Subotin and
                  Anton Leuski},
  title        = {Making MIRACLEs: Interactive translingual search for Cebuano and Hindi},
  journal      = {{ACM} Trans. Asian Lang. Inf. Process.},
  volume       = {2},
  number       = {3},
  pages        = {219--244},
  year         = {2003},
  url          = {https://doi.org/10.1145/979872.979876},
  doi          = {10.1145/979872.979876},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/talip/HeOWLDDRKNSL03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/drr/HauserSSDST03,
  author       = {Susan E. Hauser and
                  Jonathan Schlaifer and
                  Tehseen F. Sabir and
                  Dina Demner{-}Fushman and
                  Scott Straughan and
                  George R. Thoma},
  editor       = {Tapas Kanungo and
                  Elisa H. Barney Smith and
                  Jianying Hu and
                  Paul B. Kantor},
  title        = {Correcting {OCR} text by association with historical datasets},
  booktitle    = {Document Recognition and Retrieval X, Santa Clara, California, USA,
                  January 22-23, 2003, Proceedings},
  series       = {{SPIE} Proceedings},
  volume       = {5010},
  pages        = {84--93},
  publisher    = {{SPIE}},
  year         = {2003},
  url          = {https://doi.org/10.1117/12.476046},
  doi          = {10.1117/12.476046},
  timestamp    = {Wed, 24 May 2017 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/drr/HauserSSDST03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hicss/Demner-FushmanO03,
  author       = {Dina Demner{-}Fushman and
                  Douglas W. Oard},
  title        = {The Effect of Bilingual Term List Size on Dictionary-Based Cross-Language
                  Information Retrieval},
  booktitle    = {36th Hawaii International Conference on System Sciences {(HICSS-36}
                  2003), {CD-ROM} / Abstracts Proceedings, January 6-9, 2003, Big Island,
                  HI, {USA}},
  pages        = {108},
  publisher    = {{IEEE} Computer Society},
  year         = {2003},
  url          = {https://doi.org/10.1109/HICSS.2003.1174250},
  doi          = {10.1109/HICSS.2003.1174250},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/hicss/Demner-FushmanO03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/trec/KayaalpAHITSDLMB03,
  author       = {Mehmet Kayaalp and
                  Alan R. Aronson and
                  Susanne M. Humphrey and
                  Nicholas C. Ide and
                  Lorraine K. Tanabe and
                  Lawrence H. Smith and
                  Dina Demner{-}Fushman and
                  Russell F. Loane and
                  James G. Mork and
                  Olivier Bodenreider},
  editor       = {Ellen M. Voorhees and
                  Lori P. Buckland},
  title        = {Methods for Accurate Retrieval of {MEDLINE} Citations in Functional
                  Genomics},
  booktitle    = {Proceedings of The Twelfth Text REtrieval Conference, {TREC} 2003,
                  Gaithersburg, Maryland, USA, November 18-21, 2003},
  series       = {{NIST} Special Publication},
  volume       = {500-255},
  pages        = {441--450},
  publisher    = {National Institute of Standards and Technology {(NIST)}},
  year         = {2003},
  url          = {http://trec.nist.gov/pubs/trec12/papers/nlm.genomics.pdf},
  timestamp    = {Wed, 07 Jul 2021 16:44:22 +0200},
  biburl       = {https://dblp.org/rec/conf/trec/KayaalpAHITSDLMB03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/trec/HeD03,
  author       = {Daqing He and
                  Dina Demner{-}Fushman},
  editor       = {Ellen M. Voorhees and
                  Lori P. Buckland},
  title        = {{HARD} Experiment at Maryland: From Need Negotiation to Automated
                  {HARD} Process},
  booktitle    = {Proceedings of The Twelfth Text REtrieval Conference, {TREC} 2003,
                  Gaithersburg, Maryland, USA, November 18-21, 2003},
  series       = {{NIST} Special Publication},
  volume       = {500-255},
  pages        = {707--714},
  publisher    = {National Institute of Standards and Technology {(NIST)}},
  year         = {2003},
  url          = {http://trec.nist.gov/pubs/trec12/papers/umaryland-he.hard.pdf},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/trec/HeD03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/tsd/OardDHRGBSDRP02,
  author       = {Douglas W. Oard and
                  Dina Demner{-}Fushman and
                  Jan Hajic and
                  Bhuvana Ramabhadran and
                  Samuel Gustman and
                  William J. Byrne and
                  Dagobert Soergel and
                  Bonnie J. Dorr and
                  Philip Resnik and
                  Michael Picheny},
  editor       = {Petr Sojka and
                  Ivan Kopecek and
                  Karel Pala},
  title        = {Cross-Language Access to Recorded Speech in the {MALACH} Project},
  booktitle    = {Text, Speech and Dialogue, 5th International Conference, {TSD} 2002,
                  Brno, Czech Republic September 9-12, 2002, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {2448},
  pages        = {57--64},
  publisher    = {Springer},
  year         = {2002},
  url          = {https://doi.org/10.1007/3-540-46154-X\_8},
  doi          = {10.1007/3-540-46154-X\_8},
  timestamp    = {Mon, 26 Jun 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/conf/tsd/OardDHRGBSDRP02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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