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ORCIDBibTeX records: Mikhail S. Gelfand
@article{DBLP:journals/bib/KobetsUGDMGSRK23,
author = {Victoria A Kobets and
Sergey V. Ulianov and
Aleksandra A. Galitsyna and
Semen A. Doronin and
Elena A. Mikhaleva and
Mikhail S. Gelfand and
Yuri Y. Shevelyov and
Sergey V. Razin and
Ekaterina E. Khrameeva},
title = {HiConfidence: a novel approach uncovering the biological signal in
Hi-C data affected by technical biases},
journal = {Briefings Bioinform.},
volume = {24},
number = {2},
year = {2023},
url = {https://doi.org/10.1093/bib/bbad044},
doi = {10.1093/BIB/BBAD044},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/KobetsUGDMGSRK23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/GalitsynaG21,
author = {Aleksandra A. Galitsyna and
Mikhail S. Gelfand},
title = {Single-cell Hi-C data analysis: safety in numbers},
journal = {Briefings Bioinform.},
volume = {22},
number = {6},
year = {2021},
url = {https://doi.org/10.1093/bib/bbab316},
doi = {10.1093/BIB/BBAB316},
timestamp = {Wed, 15 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/GalitsynaG21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ncs/FedorovG21,
author = {Aleksey K. Fedorov and
Mikhail S. Gelfand},
title = {Towards practical applications in quantum computational biology},
journal = {Nat. Comput. Sci.},
volume = {1},
number = {2},
pages = {114--119},
year = {2021},
url = {https://doi.org/10.1038/s43588-021-00024-z},
doi = {10.1038/S43588-021-00024-Z},
timestamp = {Mon, 15 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ncs/FedorovG21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/KosGUGRC21,
author = {Pavel I. Kos and
Aleksandra A. Galitsyna and
Sergey V. Ulianov and
Mikhail S. Gelfand and
Sergey V. Razin and
Alexander V. Chertovich},
title = {Perspectives for the reconstruction of 3D chromatin conformation using
single cell Hi-C data},
journal = {PLoS Comput. Biol.},
volume = {17},
number = {11},
year = {2021},
url = {https://doi.org/10.1371/journal.pcbi.1009546},
doi = {10.1371/JOURNAL.PCBI.1009546},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/KosGUGRC21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/peerj-cs/RozenwaldGSKG20,
author = {Michal Rozenwald and
Aleksandra A. Galitsyna and
Grigory V. Sapunov and
Ekaterina E. Khrameeva and
Mikhail S. Gelfand},
title = {A machine learning framework for the prediction of chromatin folding
in \emph{Drosophila} using epigenetic features},
journal = {PeerJ Comput. Sci.},
volume = {6},
pages = {e307},
year = {2020},
url = {https://doi.org/10.7717/peerj-cs.307},
doi = {10.7717/PEERJ-CS.307},
timestamp = {Wed, 16 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/peerj-cs/RozenwaldGSKG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/BykovSGG20,
author = {Nikolai S. Bykov and
Olga M. Sigalova and
Mikhail S. Gelfand and
Aleksandra A. Galitsyna},
editor = {Zhipeng Cai and
Ion I. Mandoiu and
Giri Narasimhan and
Pavel Skums and
Xuan Guo},
title = {HiChew: a Tool for {TAD} Clustering in Embryogenesis},
booktitle = {Bioinformatics Research and Applications - 16th International Symposium,
{ISBRA} 2020, Moscow, Russia, December 1-4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12304},
pages = {381--388},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-57821-3\_37},
doi = {10.1007/978-3-030-57821-3\_37},
timestamp = {Wed, 26 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/BykovSGG20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/Gelfand18,
author = {Mikhail S. Gelfand},
title = {Introduction to Papers Selected from MCCMB'17},
journal = {J. Bioinform. Comput. Biol.},
volume = {16},
number = {2},
pages = {1802002:1--1802002:2},
year = {2018},
url = {https://doi.org/10.1142/S021972001802002X},
doi = {10.1142/S021972001802002X},
timestamp = {Wed, 24 Mar 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbcb/Gelfand18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/AkkuratovGK18,
author = {Evgeny E. Akkuratov and
Mikhail S. Gelfand and
Ekaterina Khrameeva},
title = {Neanderthal and Denisovan ancestry in Papuans: {A} functional study},
journal = {J. Bioinform. Comput. Biol.},
volume = {16},
number = {2},
pages = {1840011:1--1840011:12},
year = {2018},
url = {https://doi.org/10.1142/S0219720018400115},
doi = {10.1142/S0219720018400115},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/AkkuratovGK18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/KosGUGRC18,
author = {Pavel I. Kos and
Aleksandra A. Galitsyna and
Sergey V. Ulianov and
Mikhail S. Gelfand and
Sergey V. Razin and
Alexander V. Chertovich},
editor = {Huiru Jane Zheng and
Zoraida Callejas and
David Griol and
Haiying Wang and
Xiaohua Hu and
Harald H. H. W. Schmidt and
Jan Baumbach and
Julie Dickerson and
Le Zhang},
title = {Reconstruction of the chromatin 3D conformation from single cell Hi-C
data},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2018, Madrid, Spain, December 3-6, 2018},
pages = {2476},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.ieeecomputersociety.org/10.1109/BIBM.2018.8621414},
doi = {10.1109/BIBM.2018.8621414},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/KosGUGRC18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/PushkarevaKMRG18,
author = {Olga Pushkareva and
Alexander Kurashenko and
Uliana Moskvina and
Anatoly R. Rubinov and
Mikhail S. Gelfand},
editor = {Huiru Jane Zheng and
Zoraida Callejas and
David Griol and
Haiying Wang and
Xiaohua Hu and
Harald H. H. W. Schmidt and
Jan Baumbach and
Julie Dickerson and
Le Zhang},
title = {Clustering and Comparison of Hierarchies in the Spatial Organization
of Chromatin},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2018, Madrid, Spain, December 3-6, 2018},
pages = {2482--2487},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.ieeecomputersociety.org/10.1109/BIBM.2018.8621097},
doi = {10.1109/BIBM.2018.8621097},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/PushkarevaKMRG18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/RozenwaldKSG18,
author = {Michal Rozenwald and
Ekaterina Khrameeva and
Grigory V. Sapunov and
Mikhail S. Gelfand},
editor = {Huiru Jane Zheng and
Zoraida Callejas and
David Griol and
Haiying Wang and
Xiaohua Hu and
Harald H. H. W. Schmidt and
Jan Baumbach and
Julie Dickerson and
Le Zhang},
title = {Prediction of 3D Chromatin Structure Using Recurrent Neural Networks},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2018, Madrid, Spain, December 3-6, 2018},
pages = {2488},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.ieeecomputersociety.org/10.1109/BIBM.2018.8621486},
doi = {10.1109/BIBM.2018.8621486},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/RozenwaldKSG18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/StarikovKG18,
author = {Sergei Starikov and
Ekaterina Khrameeva and
Mikhail S. Gelfand},
editor = {Huiru Jane Zheng and
Zoraida Callejas and
David Griol and
Haiying Wang and
Xiaohua Hu and
Harald H. H. W. Schmidt and
Jan Baumbach and
Julie Dickerson and
Le Zhang},
title = {Prediction of chromatin spatial structure characteristics using machine
learning methods},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2018, Madrid, Spain, December 3-6, 2018},
pages = {2489},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.ieeecomputersociety.org/10.1109/BIBM.2018.8621470},
doi = {10.1109/BIBM.2018.8621470},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/StarikovKG18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/TsoyGKUGR18,
author = {Olga Tsoy and
Aleksandra A. Galitsyna and
Ekaterina Khrameeva and
Sergey V. Ulianov and
Mikhail S. Gelfand and
Sergey V. Razin},
editor = {Huiru Jane Zheng and
Zoraida Callejas and
David Griol and
Haiying Wang and
Xiaohua Hu and
Harald H. H. W. Schmidt and
Jan Baumbach and
Julie Dickerson and
Le Zhang},
title = {The chromatin structure of Dictyostelium discoideum},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2018, Madrid, Spain, December 3-6, 2018},
pages = {2492},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.ieeecomputersociety.org/10.1109/BIBM.2018.8621330},
doi = {10.1109/BIBM.2018.8621330},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/TsoyGKUGR18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/UlianovDKKSGLGC18,
author = {Sergey V. Ulianov and
Semen A. Doronin and
Ekaterina E. Khrameeva and
Pavel I. Kos and
Sergey S. Starikov and
Aleksandra A. Galitsyna and
Artem Luzhin and
Mikhail S. Gelfand and
Alexander V. Chertovich and
Sergey V. Razin and
Yuri Y. Shevelyov},
editor = {Huiru Jane Zheng and
Zoraida Callejas and
David Griol and
Haiying Wang and
Xiaohua Hu and
Harald H. H. W. Schmidt and
Jan Baumbach and
Julie Dickerson and
Le Zhang},
title = {Nuclear lamina maintains global spatial organization of chromatin
in Drosophila cultured cells},
booktitle = {{IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2018, Madrid, Spain, December 3-6, 2018},
pages = {2493},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.ieeecomputersociety.org/10.1109/BIBM.2018.8621123},
doi = {10.1109/BIBM.2018.8621123},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bibm/UlianovDKKSGLGC18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/Gelfand16,
author = {Mikhail S. Gelfand},
title = {Introduction to selected papers from {MCCMB} 2015},
journal = {J. Bioinform. Comput. Biol.},
volume = {14},
number = {2},
pages = {1602003:1--1602003:2},
year = {2016},
url = {https://doi.org/10.1142/S0219720016020030},
doi = {10.1142/S0219720016020030},
timestamp = {Wed, 24 Mar 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbcb/Gelfand16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/KalininaSSG16,
author = {Anastasia S. Kalinina and
Alexandra L. Suvorikova and
Vladimir G. Spokoiny and
Mikhail S. Gelfand},
title = {Detection of homologous recombination in closely related strains},
journal = {J. Bioinform. Comput. Biol.},
volume = {14},
number = {2},
pages = {1641001:1--1641001:12},
year = {2016},
url = {https://doi.org/10.1142/S0219720016410018},
doi = {10.1142/S0219720016410018},
timestamp = {Wed, 24 Mar 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbcb/KalininaSSG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/KhrameevaFGM16,
author = {Ekaterina Khrameeva and
Geoffrey Fudenberg and
Mikhail S. Gelfand and
Leonid A. Mirny},
title = {History of chromosome rearrangements reflects the spatial organization
of yeast chromosomes},
journal = {J. Bioinform. Comput. Biol.},
volume = {14},
number = {2},
pages = {1641002:1--1641002:12},
year = {2016},
url = {https://doi.org/10.1142/S021972001641002X},
doi = {10.1142/S021972001641002X},
timestamp = {Wed, 24 Mar 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jbcb/KhrameevaFGM16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/PirogovRKG16,
author = {Sergey Pirogov and
Alexander Rybko and
Anastasia S. Kalinina and
Mikhail S. Gelfand},
title = {Recombination Processes and Nonlinear Markov Chains},
journal = {J. Comput. Biol.},
volume = {23},
number = {9},
pages = {711--717},
year = {2016},
url = {https://doi.org/10.1089/cmb.2016.0051},
doi = {10.1089/CMB.2016.0051},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/PirogovRKG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/ZaikaDG16,
author = {Andrey V. Zaika and
Iakov I. Davydov and
Mikhail S. Gelfand},
editor = {Anu G. Bourgeois and
Pavel Skums and
Xiang Wan and
Alex Zelikovsky},
title = {Selectoscope: {A} Modern Web-App for Positive Selection Analysis of
Genomic Data},
booktitle = {Bioinformatics Research and Applications - 12th International Symposium,
{ISBRA} 2016, Minsk, Belarus, June 5-8, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9683},
pages = {253--257},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-38782-6\_21},
doi = {10.1007/978-3-319-38782-6\_21},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbra/ZaikaDG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/pr/PonomarevAGK14,
author = {Gennady V. Ponomarev and
Vladimir L. Arlazarov and
Mikhail S. Gelfand and
Marat D. Kazanov},
title = {{ANA} HEp-2 cells image classification using number, size, shape and
localization of targeted cell regions},
journal = {Pattern Recognit.},
volume = {47},
number = {7},
pages = {2360--2366},
year = {2014},
url = {https://doi.org/10.1016/j.patcog.2013.09.027},
doi = {10.1016/J.PATCOG.2013.09.027},
timestamp = {Mon, 24 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/pr/PonomarevAGK14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/RuedaFKYPRFMPTSMCBCSPGKWCPHN14,
author = {Sylvia Rueda and
Sana Fathima and
Caroline L. Knight and
Mohammad Yaqub and
Aris T. Papageorghiou and
Bahbibi Rahmatullah and
Alessandro Foi and
Matteo Maggioni and
Antonietta Pepe and
Jussi Tohka and
Richard V. Stebbing and
John McManigle and
Anca Ciurte and
Xavier Bresson and
Meritxell Bach Cuadra and
Changming Sun and
Gennady V. Ponomarev and
Mikhail S. Gelfand and
Marat D. Kazanov and
Ching{-}Wei Wang and
Hsiang{-}Chou Chen and
Chun{-}Wei Peng and
Chu{-}Mei Hung and
J. Alison Noble},
title = {Evaluation and Comparison of Current Fetal Ultrasound Image Segmentation
Methods for Biometric Measurements: {A} Grand Challenge},
journal = {{IEEE} Trans. Medical Imaging},
volume = {33},
number = {4},
pages = {797--813},
year = {2014},
url = {https://doi.org/10.1109/TMI.2013.2276943},
doi = {10.1109/TMI.2013.2276943},
timestamp = {Tue, 05 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tmi/RuedaFKYPRFMPTSMCBCSPGKWCPHN14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KhrameevaG12,
author = {Ekaterina Khrameeva and
Mikhail S. Gelfand},
title = {Biases in read coverage demonstrated by interlaboratory and interplatform
comparison of 117 mRNA and genome sequencing experiments},
journal = {{BMC} Bioinform.},
volume = {13},
number = {{S-6}},
pages = {S4},
year = {2012},
url = {https://doi.org/10.1186/1471-2105-13-S6-S4},
doi = {10.1186/1471-2105-13-S6-S4},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KhrameevaG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/PervouchineKPNGRM12,
author = {Dmitri D. Pervouchine and
Ekaterina Khrameeva and
Marina Pichugina and
Olexii Nikolaienko and
Mikhail S. Gelfand and
Petr Rubtsov and
Andrey A. Mironov},
editor = {Benny Chor},
title = {Evidence for Widespread Association of Mammalian Splicing and Conserved
Long-Range {RNA} Structures},
booktitle = {Research in Computational Molecular Biology - 16th Annual International
Conference, {RECOMB} 2012, Barcelona, Spain, April 21-24, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7262},
pages = {199},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-29627-7\_20},
doi = {10.1007/978-3-642-29627-7\_20},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/PervouchineKPNGRM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/almob/MazinGMRRRK10,
author = {Pavel V. Mazin and
Mikhail S. Gelfand and
Andrey A. Mironov and
Aleksandra B. Rakhmaninova and
Anatoly R. Rubinov and
Robert B. Russell and
Olga V. Kalinina},
title = {An automated stochastic approach to the identification of the protein
specificity determinants and functional subfamilies},
journal = {Algorithms Mol. Biol.},
volume = {5},
pages = {29},
year = {2010},
url = {https://doi.org/10.1186/1748-7188-5-29},
doi = {10.1186/1748-7188-5-29},
timestamp = {Fri, 13 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/almob/MazinGMRRRK10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isb/GorbunovLRGL10,
author = {Konstantin Yu. Gorbunov and
Olga N. Laikova and
Dmitry A. Rodionov and
Mikhail S. Gelfand and
Vassily A. Lyubetsky},
title = {Evolution of Regulatory Motifs of Bacterial Transcription Factors},
journal = {Silico Biol.},
volume = {10},
number = {3-4},
pages = {163--183},
year = {2010},
url = {https://doi.org/10.3233/ISB-2010-0425},
doi = {10.3233/ISB-2010-0425},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/isb/GorbunovLRGL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/NovichkovLNGADR10,
author = {Pavel S. Novichkov and
Olga N. Laikova and
Elena S. Novichkova and
Mikhail S. Gelfand and
Adam P. Arkin and
Inna Dubchak and
Dmitry A. Rodionov},
title = {RegPrecise: a database of curated genomic inferences of transcriptional
regulatory interactions in prokaryotes},
journal = {Nucleic Acids Res.},
volume = {38},
number = {Database-Issue},
pages = {111--118},
year = {2010},
url = {https://doi.org/10.1093/nar/gkp894},
doi = {10.1093/NAR/GKP894},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/NovichkovLNGADR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/NovichkovRSNKGAMD10,
author = {Pavel S. Novichkov and
Dmitry A. Rodionov and
Elena D. Stavrovskaya and
Elena S. Novichkova and
Alexei E. Kazakov and
Mikhail S. Gelfand and
Adam P. Arkin and
Andrey A. Mironov and
Inna Dubchak},
title = {RegPredict: an integrated system for regulon inference in prokaryotes
by comparative genomics approach},
journal = {Nucleic Acids Res.},
volume = {38},
number = {Web-Server-Issue},
pages = {299--307},
year = {2010},
url = {https://doi.org/10.1093/nar/gkq531},
doi = {10.1093/NAR/GKQ531},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/NovichkovRSNKGAMD10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/prib/FedoninG10,
author = {Gennady G. Fedonin and
Mikhail S. Gelfand},
editor = {Tjeerd Dijkstra and
Evgeni Tsivtsivadze and
Elena Marchiori and
Tom Heskes},
title = {Machine Learning Study of {DNA} Binding by Transcription Factors from
the LacI Family},
booktitle = {Pattern Recognition in Bioinformatics - 5th {IAPR} International Conference,
{PRIB} 2010, Nijmegen, The Netherlands, September 22-24, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6282},
pages = {15--26},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-16001-1\_2},
doi = {10.1007/978-3-642-16001-1\_2},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/prib/FedoninG10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KalininaGR09,
author = {Olga V. Kalinina and
Mikhail S. Gelfand and
Robert B. Russell},
title = {Combining specificity determining and conserved residues improves
functional site prediction},
journal = {{BMC} Bioinform.},
volume = {10},
year = {2009},
url = {https://doi.org/10.1186/1471-2105-10-174},
doi = {10.1186/1471-2105-10-174},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KalininaGR09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbra/GelfandKKLMRRRV09,
author = {Mikhail S. Gelfand and
Alexei E. Kazakov and
Yuri D. Korostelev and
Olga N. Laikova and
Andrey A. Mironov and
Aleksandra B. Rakhmaninova and
Dmitry A. Ravcheev and
Dmitry A. Rodionov and
Alexei G. Vitreschak},
editor = {Ion I. Mandoiu and
Giri Narasimhan and
Yanqing Zhang},
title = {Evolution of Regulatory Systems in Bacteria (Invited Keynote Talk)},
booktitle = {Bioinformatics Research and Applications, 5th International Symposium,
{ISBRA} 2009, Fort Lauderdale, FL, USA, May 13-16, 2009, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5542},
pages = {1--4},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-01551-9\_1},
doi = {10.1007/978-3-642-01551-9\_1},
timestamp = {Fri, 24 Mar 2023 16:31:04 +0100},
biburl = {https://dblp.org/rec/conf/isbra/GelfandKKLMRRRV09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/SernovaG08,
author = {Natalia V. Sernova and
Mikhail S. Gelfand},
title = {Identification of replication origins in prokaryotic genomes},
journal = {Briefings Bioinform.},
volume = {9},
number = {5},
pages = {376--391},
year = {2008},
url = {https://doi.org/10.1093/bib/bbn031},
doi = {10.1093/BIB/BBN031},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/SernovaG08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/ErmakovaNG07,
author = {Ekaterina O. Ermakova and
Ramil N. Nurtdinov and
Mikhail S. Gelfand},
title = {Overlapping Alternative donor splice Sites in the Human genome},
journal = {J. Bioinform. Comput. Biol.},
volume = {5},
number = {5},
pages = {991--1004},
year = {2007},
url = {https://doi.org/10.1142/S0219720007003089},
doi = {10.1142/S0219720007003089},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/ErmakovaNG07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KazakovCNMVAMGD07,
author = {Alexei E. Kazakov and
Michael J. Cipriano and
Pavel S. Novichkov and
Simon Minovitsky and
Dmitry V. Vinogradov and
Adam P. Arkin and
Andrey A. Mironov and
Mikhail S. Gelfand and
Inna Dubchak},
title = {RegTransBase - a database of regulatory sequences and interactions
in a wide range of prokaryotic genomes},
journal = {Nucleic Acids Res.},
volume = {35},
number = {Database-Issue},
pages = {407--412},
year = {2007},
url = {https://doi.org/10.1093/nar/gkl865},
doi = {10.1093/NAR/GKL865},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KazakovCNMVAMGD07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/KovalevaBBG06,
author = {Galina Yu. Kovaleva and
Georgii A. Bazykin and
Michael Brudno and
Mikhail S. Gelfand},
title = {Comparative Genomics of Transcriptional Regulation in Yeasts and its
Application to Identification of a Candidate Alpha-isopropylmalate
Transporter},
journal = {J. Bioinform. Comput. Biol.},
volume = {4},
number = {5},
pages = {981--998},
year = {2006},
url = {https://doi.org/10.1142/S0219720006002284},
doi = {10.1142/S0219720006002284},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/KovalevaBBG06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/SadovskayaSG06,
author = {Nataliya S. Sadovskaya and
Roman A. Sutormin and
Mikhail S. Gelfand},
title = {Recognition of Transmembrane Segments in Proteins: Review and Consistency-based
Benchmarking of Internet Servers},
journal = {J. Bioinform. Comput. Biol.},
volume = {4},
number = {5},
pages = {1033--1056},
year = {2006},
url = {https://doi.org/10.1142/S0219720006002326},
doi = {10.1142/S0219720006002326},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/SadovskayaSG06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/RodionovGTCJ06,
author = {Dmitry A. Rodionov and
Mikhail S. Gelfand and
Jonathan D. Todd and
Andrew R. J. Curson and
Andrew W. B. Johnston},
title = {Computational Reconstruction of Iron- and Manganese-Responsive Transcriptional
Networks in {\(\alpha\)}-Proteobacteria},
journal = {PLoS Comput. Biol.},
volume = {2},
number = {12},
year = {2006},
url = {https://doi.org/10.1371/journal.pcbi.0020163},
doi = {10.1371/JOURNAL.PCBI.0020163},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/RodionovGTCJ06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FavorovGGRMM05,
author = {Alexander V. Favorov and
Mikhail S. Gelfand and
Anna V. Gerasimova and
Dmitry A. Ravcheev and
Andrey A. Mironov and
Vsevolod J. Makeev},
title = {A Gibbs sampler for identification of symmetrically structured, spaced
{DNA} motifs with improved estimation of the signal length},
journal = {Bioinform.},
volume = {21},
number = {10},
pages = {2240--2245},
year = {2005},
url = {https://doi.org/10.1093/bioinformatics/bti336},
doi = {10.1093/BIOINFORMATICS/BTI336},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FavorovGGRMM05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ArtamonovaFGF05,
author = {Irena I. Artamonova and
Goar Frishman and
Mikhail S. Gelfand and
Dmitrij Frishman},
title = {Mining sequence annotation databanks for association patterns},
journal = {Bioinform.},
volume = {21},
number = {{S3}},
pages = {57},
year = {2005},
url = {https://doi.org/10.1093/bioinformatics/bti1206},
doi = {10.1093/BIOINFORMATICS/BTI1206},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ArtamonovaFGF05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NeverovANFGM05,
author = {A. D. Neverov and
Irena I. Artamonova and
Ramil N. Nurtdinov and
Dmitrij Frishman and
Mikhail S. Gelfand and
Andrey A. Mironov},
title = {Alternative splicing and protein function},
journal = {{BMC} Bioinform.},
volume = {6},
pages = {266},
year = {2005},
url = {https://doi.org/10.1186/1471-2105-6-266},
doi = {10.1186/1471-2105-6-266},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/NeverovANFGM05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbcb/GerasimovaG05,
author = {Anna V. Gerasimova and
Mikhail S. Gelfand},
title = {Evolution of the Nadr Regulon in Enterobacteriaceae},
journal = {J. Bioinform. Comput. Biol.},
volume = {3},
number = {4},
pages = {1007--1019},
year = {2005},
url = {https://doi.org/10.1142/S0219720005001387},
doi = {10.1142/S0219720005001387},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbcb/GerasimovaG05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/RodionovDAAG05,
author = {Dmitry A. Rodionov and
Inna Dubchak and
Adam P. Arkin and
Eric J. Alm and
Mikhail S. Gelfand},
title = {Dissimilatory Metabolism of Nitrogen Oxides in Bacteria: Comparative
Reconstruction of Transcriptional Networks},
journal = {PLoS Comput. Biol.},
volume = {1},
number = {5},
year = {2005},
url = {https://doi.org/10.1371/journal.pcbi.0010055},
doi = {10.1371/JOURNAL.PCBI.0010055},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/RodionovDAAG05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/OffmanNGF04,
author = {Marc N. Offman and
Ramil N. Nurtdinov and
Mikhail S. Gelfand and
Dmitrij Frishman},
title = {No statistical support for correlation between the positions of protein
interaction sites and alternatively spliced regions},
journal = {{BMC} Bioinform.},
volume = {5},
pages = {41},
year = {2004},
url = {https://doi.org/10.1186/1471-2105-5-41},
doi = {10.1186/1471-2105-5-41},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/OffmanNGF04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KalininaNMGR04,
author = {Olga V. Kalinina and
Pavel S. Novichkov and
Andrey A. Mironov and
Mikhail S. Gelfand and
Aleksandra B. Rakhmaninova},
title = {SDPpred: a tool for prediction of amino acid residues that determine
differences in functional specificity of homologous proteins},
journal = {Nucleic Acids Res.},
volume = {32},
number = {Web-Server-Issue},
pages = {424--428},
year = {2004},
url = {https://doi.org/10.1093/nar/gkh391},
doi = {10.1093/NAR/GKH391},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/KalininaNMGR04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isb/KazakovVGOO03,
author = {Alexei E. Kazakov and
Olga Vassieva and
Mikhail S. Gelfand and
Andrei Osterman and
Ross A. Overbeek},
title = {Bioinformatics classification and functional analysis of PhoH homologs},
journal = {Silico Biol.},
volume = {3},
number = {1-2},
pages = {3--15},
year = {2003},
url = {http://content.iospress.com/articles/in-silico-biology/isb00073},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/isb/KazakovVGOO03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isb/DanilovaLG03,
author = {Ludmila V. Danilova and
Vassily A. Lyubetsky and
Mikhail S. Gelfand},
title = {An algorithm for identification of regulatory signals in unaligned
{DNA} sequences, its testing and parallel implementation},
journal = {Silico Biol.},
volume = {3},
number = {1-2},
pages = {33--47},
year = {2003},
url = {http://content.iospress.com/articles/in-silico-biology/isb00075},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/isb/DanilovaLG03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/isb/KalininaMSGR03,
author = {Olga V. Kalinina and
Vsevolod J. Makeev and
Roman A. Sutormin and
Mikhail S. Gelfand and
Aleksandra B. Rakhmaninova},
title = {The channel in transporters is formed by residues that are rare in
transmembrane helices},
journal = {Silico Biol.},
volume = {3},
number = {1-2},
pages = {197--204},
year = {2003},
url = {http://content.iospress.com/articles/in-silico-biology/isb00088},
timestamp = {Thu, 20 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/isb/KalininaMSGR03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/EskinKGP03,
author = {Eleazar Eskin and
Uri Keich and
Mikhail S. Gelfand and
Pavel A. Pevzner},
editor = {Russ B. Altman and
A. Keith Dunker and
Lawrence Hunter and
Teri E. Klein},
title = {Genome-Wide Analysis of Bacterial Promoter Regions},
booktitle = {Proceedings of the 8th Pacific Symposium on Biocomputing, {PSB} 2003,
Lihue, Hawaii, USA, January 3-7, 2003},
pages = {29--40},
year = {2003},
url = {http://psb.stanford.edu/psb-online/proceedings/psb03/eskin.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/psb/EskinKGP03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/BaytalukGM02,
author = {M. V. Baytaluk and
Mikhail S. Gelfand and
Andrey A. Mironov},
title = {Exact mapping of prokaryotic gene starts},
journal = {Briefings Bioinform.},
volume = {3},
number = {2},
pages = {181--194},
year = {2002},
url = {https://doi.org/10.1093/bib/3.2.181},
doi = {10.1093/BIB/3.2.181},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/BaytalukGM02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/PonomarenkoOFGP03,
author = {Julia V. Ponomarenko and
Galina Orlova and
Anatoly S. Frolov and
Mikhail S. Gelfand and
Mikhail P. Ponomarenko},
title = {SELEX{\_}DB: a database on in vitro selected oligomers adapted for
recognizing natural sites and for analyzing both SNPs and site-directed
mutagenesis data},
journal = {Nucleic Acids Res.},
volume = {30},
number = {1},
pages = {195--199},
year = {2002},
url = {https://doi.org/10.1093/nar/30.1.195},
doi = {10.1093/NAR/30.1.195},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/PonomarenkoOFGP03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/SzeGP02,
author = {Sing{-}Hoi Sze and
Mikhail S. Gelfand and
Pavel A. Pevzner},
editor = {Russ B. Altman and
A. Keith Dunker and
Lawrence Hunter and
Teri E. Klein},
title = {Finding Weak Motifs in {DNA} Sequences},
booktitle = {Proceedings of the 7th Pacific Symposium on Biocomputing, {PSB} 2002,
Lihue, Hawaii, USA, January 3-7, 2002},
pages = {235--246},
year = {2002},
url = {http://psb.stanford.edu/psb-online/proceedings/psb02/sze.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/psb/SzeGP02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/MironovNG01,
author = {Andrey A. Mironov and
Pavel S. Novichkov and
Mikhail S. Gelfand},
title = {Pro-Frame: similarity-based gene recognition in eukaryotic {DNA} sequences
with errors},
journal = {Bioinform.},
volume = {17},
number = {1},
pages = {13--15},
year = {2001},
url = {https://doi.org/10.1093/bioinformatics/17.1.13},
doi = {10.1093/BIOINFORMATICS/17.1.13},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/MironovNG01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NovichkovGM01,
author = {Pavel S. Novichkov and
Mikhail S. Gelfand and
Andrey A. Mironov},
title = {Gene recognition in eukaryotic {DNA} by comparison of genomic sequences},
journal = {Bioinform.},
volume = {17},
number = {11},
pages = {1011--1018},
year = {2001},
url = {https://doi.org/10.1093/bioinformatics/17.11.1011},
doi = {10.1093/BIOINFORMATICS/17.11.1011},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/NovichkovGM01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/GelfandNNM00,
author = {Mikhail S. Gelfand and
Pavel S. Novichkov and
Elena S. Novichkova and
Andrey A. Mironov},
title = {Comparative Analysis of Regulatory Patterns in Bacterial Genomes},
journal = {Briefings Bioinform.},
volume = {1},
number = {4},
pages = {357--371},
year = {2000},
url = {https://doi.org/10.1093/bib/1.4.357},
doi = {10.1093/BIB/1.4.357},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/GelfandNNM00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/DralyukBGZD00,
author = {I. Dralyuk and
Michael Brudno and
Mikhail S. Gelfand and
Manfred Zorn and
Inna Dubchak},
title = {{ASDB:} database of alternatively spliced genes},
journal = {Nucleic Acids Res.},
volume = {28},
number = {1},
pages = {296--297},
year = {2000},
url = {https://doi.org/10.1093/nar/28.1.296},
doi = {10.1093/NAR/28.1.296},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/DralyukBGZD00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/jobim/MakeevRGRT00,
author = {Vsevolod J. Makeev and
Vasily Ramensky and
Mikhail S. Gelfand and
Mikhail A. Roytberg and
Vladimir G. Tumanyan},
editor = {Olivier Gascuel and
Marie{-}France Sagot},
title = {Bayesian Approach to {DNA} Segmentation into Regions with Different
Average Nucleotide Composition},
booktitle = {Computational Biology, First International Conference on Biology,
Informatics, and Mathematics, {JOBIM} 2000, Montpellier, France, May
3-5, 2000, Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {2066},
pages = {57--73},
publisher = {Springer},
year = {2000},
url = {https://doi.org/10.1007/3-540-45727-5\_6},
doi = {10.1007/3-540-45727-5\_6},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/jobim/MakeevRGRT00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PeshkinG99,
author = {Leonid Peshkin and
Mikhail S. Gelfand},
title = {Segmentation of yeast {DNA} using hidden Markov models},
journal = {Bioinform.},
volume = {15},
number = {12},
pages = {980--986},
year = {1999},
url = {https://doi.org/10.1093/bioinformatics/15.12.980},
doi = {10.1093/BIOINFORMATICS/15.12.980},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/PeshkinG99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GelfandDDZ99,
author = {Mikhail S. Gelfand and
Inna Dubchak and
I. Dralyuk and
Manfred Zorn},
title = {{ASDB:} database of alternatively spliced genes},
journal = {Nucleic Acids Res.},
volume = {27},
number = {1},
pages = {301--302},
year = {1999},
url = {https://doi.org/10.1093/nar/27.1.301},
doi = {10.1093/NAR/27.1.301},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GelfandDDZ99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SzeRGMAP98,
author = {Sing{-}Hoi Sze and
Mikhail A. Roytberg and
Mikhail S. Gelfand and
Andrey A. Mironov and
Tatiana V. Astakhova and
Pavel A. Pevzner},
title = {Algorithms and software for support of gene identification experiments},
journal = {Bioinform.},
volume = {14},
number = {1},
pages = {14--19},
year = {1998},
url = {https://doi.org/10.1093/bioinformatics/14.1.14},
doi = {10.1093/BIOINFORMATICS/14.1.14},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SzeRGMAP98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gcb/FrishmanMMG98,
author = {Dmitrij Frishman and
Andrey A. Mironov and
Hans{-}Werner Mewes and
Mikhail S. Gelfand},
title = {Combining diverse evidence for gene recognition in completely sequenced
bacterial genomes},
booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 1998,
University of Cologne, Germany, October 1998},
publisher = {Oxford University Press},
year = {1998},
timestamp = {Fri, 02 Aug 2019 15:48:14 +0200},
biburl = {https://dblp.org/rec/conf/gcb/FrishmanMMG98.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/candc/RoytbergAG97,
author = {Mikhail A. Roytberg and
Tatiana V. Astakhova and
Mikhail S. Gelfand},
title = {Combinatorial Approaches to Gene Recognition},
journal = {Comput. Chem.},
volume = {21},
number = {4},
pages = {229--235},
year = {1997},
url = {https://doi.org/10.1016/S0097-8485(96)00034-4},
doi = {10.1016/S0097-8485(96)00034-4},
timestamp = {Mon, 18 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/candc/RoytbergAG97.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/GelfandPAR96,
author = {Mikhail S. Gelfand and
L. I. Podolsky and
Tatiana V. Astakhova and
Mikhail A. Roytberg},
title = {Recognition of Genes in Human {DNA} Sequences},
journal = {J. Comput. Biol.},
volume = {3},
number = {2},
pages = {223--234},
year = {1996},
url = {https://doi.org/10.1089/cmb.1996.3.223},
doi = {10.1089/CMB.1996.3.223},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/GelfandPAR96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cpm/GelfandMP96,
author = {Mikhail S. Gelfand and
Andrey A. Mironov and
Pavel A. Pevzner},
editor = {Daniel S. Hirschberg and
Eugene W. Myers},
title = {Spliced Alignment: {A} New Approach to Gene Recognition},
booktitle = {Combinatorial Pattern Matching, 7th Annual Symposium, {CPM} 96, Laguna
Beach, California, USA, June 10-12, 1996, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {1075},
pages = {141--158},
publisher = {Springer},
year = {1996},
url = {https://doi.org/10.1007/3-540-61258-0\_12},
doi = {10.1007/3-540-61258-0\_12},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cpm/GelfandMP96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/Gelfand95,
author = {Mikhail S. Gelfand},
title = {{FANS-REF:} a bibliography on statistics and functional analysis of
nucleotide sequences},
journal = {Comput. Appl. Biosci.},
volume = {11},
number = {5},
pages = {541},
year = {1995},
url = {https://doi.org/10.1093/bioinformatics/11.5.541},
doi = {10.1093/BIOINFORMATICS/11.5.541},
timestamp = {Fri, 15 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/Gelfand95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/Gelfand95,
author = {Mikhail S. Gelfand},
title = {Prediction of Function in {DNA} Sequence},
journal = {J. Comput. Biol.},
volume = {2},
number = {1},
pages = {87--115},
year = {1995},
url = {https://doi.org/10.1089/cmb.1995.2.87},
doi = {10.1089/CMB.1995.2.87},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/Gelfand95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/RubinovG95,
author = {Anatoly R. Rubinov and
Mikhail S. Gelfand},
title = {Reconstruction of a String from Substring Precedence Data},
journal = {J. Comput. Biol.},
volume = {2},
number = {2},
pages = {371--381},
year = {1995},
url = {https://doi.org/10.1089/cmb.1995.2.371},
doi = {10.1089/CMB.1995.2.371},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/RubinovG95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/RazgulyaevRGC95,
author = {Oleg Razgulyaev and
Anatoly R. Rubinov and
Mikhail S. Gelfand and
Alexander Chetverin},
title = {Sequencing Potential of Nested Strand Hybridization},
journal = {J. Comput. Biol.},
volume = {2},
number = {2},
pages = {383--395},
year = {1995},
url = {https://doi.org/10.1089/cmb.1995.2.383},
doi = {10.1089/CMB.1995.2.383},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/RazgulyaevRGC95.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GelfandKP92,
author = {Mikhail S. Gelfand and
C. G. Kozhukhin and
Pavel A. Pevzner},
title = {Extendable words in nucleotide sequences},
journal = {Comput. Appl. Biosci.},
volume = {8},
number = {2},
pages = {129--135},
year = {1992},
url = {https://doi.org/10.1093/bioinformatics/8.2.129},
doi = {10.1093/BIOINFORMATICS/8.2.129},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/GelfandKP92.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dimacs/Gelfand92,
author = {Mikhail S. Gelfand},
editor = {Simon Gindikin},
title = {Computer Functional Analysis of Nucleotide Sequences: Problems and
Approaches},
booktitle = {Mathematical Methods Of Analysis Of Biopolymer Sequences, Proceedings
of a {DIMACS} Workshop},
series = {{DIMACS} Series in Discrete Mathematics and Theoretical Computer Science},
volume = {8},
pages = {19--62},
publisher = {{DIMACS/AMS}},
year = {1992},
url = {https://doi.org/10.1090/dimacs/008/03},
doi = {10.1090/DIMACS/008/03},
timestamp = {Mon, 22 May 2023 16:07:35 +0200},
biburl = {https://dblp.org/rec/conf/dimacs/Gelfand92.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dimacs/Gelfand92a,
author = {Mikhail S. Gelfand},
editor = {Simon Gindikin},
title = {Prediction of Protein-Coding Regions in {DNA} of Higher Eukaryotes},
booktitle = {Mathematical Methods Of Analysis Of Biopolymer Sequences, Proceedings
of a {DIMACS} Workshop},
series = {{DIMACS} Series in Discrete Mathematics and Theoretical Computer Science},
volume = {8},
pages = {87--98},
publisher = {{DIMACS/AMS}},
year = {1992},
url = {https://doi.org/10.1090/dimacs/008/06},
doi = {10.1090/DIMACS/008/06},
timestamp = {Thu, 09 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/dimacs/Gelfand92a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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