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ORCIDBibTeX records: Andrei N. Lupas
@article{DBLP:journals/bioinformatics/PereiraL21,
author = {Joana Pereira and
Andrei N. Lupas},
title = {The {VCBS} superfamily forms a third supercluster of {\(\beta\)}-propellers
that includes tachylectin and integrins},
journal = {Bioinform.},
volume = {36},
number = {24},
pages = {5618--5622},
year = {2021},
url = {https://doi.org/10.1093/bioinformatics/btaa1085},
doi = {10.1093/BIOINFORMATICS/BTAA1085},
timestamp = {Tue, 01 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/PereiraL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FuchsAL21,
author = {Adrian C. D. Fuchs and
Vikram Alva and
Andrei N. Lupas},
title = {An astonishing wealth of new proteasome homologs},
journal = {Bioinform.},
volume = {37},
number = {24},
pages = {4694--4703},
year = {2021},
url = {https://doi.org/10.1093/bioinformatics/btab558},
doi = {10.1093/BIOINFORMATICS/BTAB558},
timestamp = {Tue, 12 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/FuchsAL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AlvaL19,
author = {Vikram Alva and
Andrei N. Lupas},
title = {Histones predate the split between bacteria and archaea},
journal = {Bioinform.},
volume = {35},
number = {14},
pages = {2349--2353},
year = {2019},
url = {https://doi.org/10.1093/bioinformatics/bty1000},
doi = {10.1093/BIOINFORMATICS/BTY1000},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AlvaL19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PereiraL18,
author = {Joana Pereira and
Andrei N. Lupas},
title = {The ancestral {KH} peptide at the root of a domain family with three
different folds},
journal = {Bioinform.},
volume = {34},
number = {23},
pages = {3961--3965},
year = {2018},
url = {https://doi.org/10.1093/bioinformatics/bty480},
doi = {10.1093/BIOINFORMATICS/BTY480},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/PereiraL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/AlvaNSL16,
author = {Vikram Alva and
Seung{-}Zin Nam and
Johannes S{\"{o}}ding and
Andrei N. Lupas},
title = {The {MPI} bioinformatics Toolkit as an integrative platform for advanced
protein sequence and structure analysis},
journal = {Nucleic Acids Res.},
volume = {44},
number = {Webserver-Issue},
pages = {W410--W415},
year = {2016},
url = {https://doi.org/10.1093/nar/gkw348},
doi = {10.1093/NAR/GKW348},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/AlvaNSL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/LupasZK15,
author = {Andrei N. Lupas and
Hongbo Zhu and
Mateusz Korycinski},
title = {The Thalidomide-Binding Domain of Cereblon Defines the {CULT} Domain
Family and Is a New Member of the {\(\beta\)}-Tent Fold},
journal = {PLoS Comput. Biol.},
volume = {11},
number = {1},
year = {2015},
url = {https://doi.org/10.1371/journal.pcbi.1004023},
doi = {10.1371/JOURNAL.PCBI.1004023},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/LupasZK15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KopecAL10,
author = {Klaus O. Kopec and
Vikram Alva and
Andrei N. Lupas},
title = {Homology of {SMP} domains to the {TULIP} superfamily of lipid-binding
proteins provides a structural basis for lipid exchange between {ER}
and mitochondria},
journal = {Bioinform.},
volume = {26},
number = {16},
pages = {1927--1931},
year = {2010},
url = {https://doi.org/10.1093/bioinformatics/btq326},
doi = {10.1093/BIOINFORMATICS/BTQ326},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/KopecAL10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/RemmertLLS09,
author = {Michael Remmert and
Dirk Linke and
Andrei N. Lupas and
Johannes S{\"{o}}ding},
title = {HHomp - prediction and classification of outer membrane proteins},
journal = {Nucleic Acids Res.},
volume = {37},
number = {Web-Server-Issue},
pages = {446--451},
year = {2009},
url = {https://doi.org/10.1093/nar/gkp325},
doi = {10.1093/NAR/GKP325},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/RemmertLLS09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SzczesnyL08,
author = {Pawel Szczesny and
Andrei N. Lupas},
title = {Domain annotation of trimeric autotransporter adhesins - daTAA},
journal = {Bioinform.},
volume = {24},
number = {10},
pages = {1251--1256},
year = {2008},
url = {https://doi.org/10.1093/bioinformatics/btn118},
doi = {10.1093/BIOINFORMATICS/BTN118},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SzczesnyL08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/Lupas08,
author = {Andrei N. Lupas},
editor = {Martin Vingron and
Limsoon Wong},
title = {At the Origin of Life: How Did Folded Proteins Evolve?},
booktitle = {Research in Computational Molecular Biology, 12th Annual International
Conference, {RECOMB} 2008, Singapore, March 30 - April 2, 2008. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4955},
pages = {272},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-78839-3\_23},
doi = {10.1007/978-3-540-78839-3\_23},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/Lupas08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/KarpenahalliLS07,
author = {Manjunatha R. Karpenahalli and
Andrei N. Lupas and
Johannes S{\"{o}}ding},
title = {TPRpred: a tool for prediction of TPR-, {PPR-} and SEL1-like repeats
from protein sequences},
journal = {{BMC} Bioinform.},
volume = {8},
year = {2007},
url = {https://doi.org/10.1186/1471-2105-8-2},
doi = {10.1186/1471-2105-8-2},
timestamp = {Sun, 15 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/KarpenahalliLS07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BiegertMRSL06,
author = {Andreas Biegert and
Christian E. Mayer and
Michael Remmert and
Johannes S{\"{o}}ding and
Andrei N. Lupas},
title = {The {MPI} Bioinformatics Toolkit for protein sequence analysis},
journal = {Nucleic Acids Res.},
volume = {34},
number = {Web-Server-Issue},
pages = {335--339},
year = {2006},
url = {https://doi.org/10.1093/nar/gkl217},
doi = {10.1093/NAR/GKL217},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/BiegertMRSL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SodingRBL06,
author = {Johannes S{\"{o}}ding and
Michael Remmert and
Andreas Biegert and
Andrei N. Lupas},
title = {HHsenser: exhaustive transitive profile search using {HMM-HMM} comparison},
journal = {Nucleic Acids Res.},
volume = {34},
number = {Web-Server-Issue},
pages = {374--378},
year = {2006},
url = {https://doi.org/10.1093/nar/gkl195},
doi = {10.1093/NAR/GKL195},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SodingRBL06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/gcb/2006,
editor = {Daniel H. Huson and
Oliver Kohlbacher and
Andrei N. Lupas and
Kay Nieselt and
Andreas Zell},
title = {German Conference on Bioinformatics {GCB} 2006, 19.09. 2006 - 22.09.
2006 in T{\"{u}}bingen, Germany},
series = {{LNI}},
volume = {{P-83}},
publisher = {{GI}},
year = {2006},
url = {https://dl.gi.de/handle/20.500.12116/24199},
isbn = {978-3-88579-177-5},
timestamp = {Wed, 13 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/gcb/2006.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/GruberSL05,
author = {Markus Gruber and
Johannes S{\"{o}}ding and
Andrei N. Lupas},
title = {{REPPER} - repeats and their periodicities in fibrous proteins},
journal = {Nucleic Acids Res.},
volume = {33},
number = {Web-Server-Issue},
pages = {239--243},
year = {2005},
url = {https://doi.org/10.1093/nar/gki405},
doi = {10.1093/NAR/GKI405},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/GruberSL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SodingBL05,
author = {Johannes S{\"{o}}ding and
Andreas Biegert and
Andrei N. Lupas},
title = {The HHpred interactive server for protein homology detection and structure
prediction},
journal = {Nucleic Acids Res.},
volume = {33},
number = {Web-Server-Issue},
pages = {244--248},
year = {2005},
url = {https://doi.org/10.1093/nar/gki408},
doi = {10.1093/NAR/GKI408},
timestamp = {Sun, 17 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/SodingBL05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/FrickeyL04,
author = {Tancred Frickey and
Andrei N. Lupas},
title = {{CLANS:} a Java application for visualizing protein families based
on pairwise similarity},
journal = {Bioinform.},
volume = {20},
number = {18},
pages = {3702--3704},
year = {2004},
url = {https://doi.org/10.1093/bioinformatics/bth444},
doi = {10.1093/BIOINFORMATICS/BTH444},
timestamp = {Mon, 02 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/FrickeyL04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/gcb/SoedingL03,
author = {Johannes S{\"{o}}ding and
Andrei N. Lupas},
title = {0n the Evolution of Proteins from Peptides(Invited Talk)},
booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 2003,
October 12-14, 2003, Neuherberg/Garching near Munich, Germany},
pages = {95--96},
year = {2003},
timestamp = {Thu, 01 Feb 2007 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/gcb/SoedingL03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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