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ORCIDBibTeX records: Honghan Wu
@article{DBLP:journals/jamia/FengWMTXZLWL24,
author = {Wei Feng and
Honghan Wu and
Hui Ma and
Zhenhuan Tao and
Mengdie Xu and
Xin Zhang and
Shan Lu and
Cheng Wan and
Yun Liu},
title = {Applying contrastive pre-training for depression and anxiety risk
prediction in type 2 diabetes patients based on heterogeneous electronic
health records: a primary healthcare case study},
journal = {J. Am. Medical Informatics Assoc.},
volume = {31},
number = {2},
pages = {445--455},
year = {2024},
url = {https://doi.org/10.1093/jamia/ocad228},
doi = {10.1093/JAMIA/OCAD228},
timestamp = {Thu, 29 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jamia/FengWMTXZLWL24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2401-05827,
author = {Jinge Wu and
Yunsoo Kim and
Honghan Wu},
title = {Hallucination Benchmark in Medical Visual Question Answering},
journal = {CoRR},
volume = {abs/2401.05827},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2401.05827},
doi = {10.48550/ARXIV.2401.05827},
eprinttype = {arXiv},
eprint = {2401.05827},
timestamp = {Thu, 25 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2401-05827.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/GrozaWDDHBDLLR23,
author = {Tudor Groza and
Honghan Wu and
Marcel E. Dinger and
Daniel Danis and
Coleman Hilton and
Anita Bagley and
Jon R. Davids and
Ling Luo and
Zhiyong Lu and
Peter N. Robinson},
title = {Term-BLAST-like alignment tool for concept recognition in noisy clinical
texts},
journal = {Bioinform.},
volume = {39},
number = {12},
year = {2023},
url = {https://doi.org/10.1093/bioinformatics/btad716},
doi = {10.1093/BIOINFORMATICS/BTAD716},
timestamp = {Fri, 22 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/GrozaWDDHBDLLR23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/eswa/FuZLWZ23,
author = {Yinghua Fu and
Ge Zhang and
Xin Lu and
Honghan Wu and
Dawei Zhang},
title = {{RMCA} U-net: Hard exudates segmentation for retinal fundus images},
journal = {Expert Syst. Appl.},
volume = {234},
pages = {120987},
year = {2023},
url = {https://doi.org/10.1016/j.eswa.2023.120987},
doi = {10.1016/J.ESWA.2023.120987},
timestamp = {Thu, 09 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/eswa/FuZLWZ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fdgth/CaseyDGTGZSOLWPFCWWMWA23,
author = {Arlene Casey and
Emma M. Davidson and
Claire Grover and
Richard Tobin and
Andreas Grivas and
Huayu Zhang and
Patrick Schrempf and
Alison Q. O'Neil and
Liam Lee and
Michael Walsh and
Freya Pellie and
Karen Ferguson and
Vera Cvoro and
Honghan Wu and
Heather Whalley and
Grant Mair and
William Whiteley and
Beatrice Alex},
title = {Understanding the performance and reliability of {NLP} tools: a comparison
of four {NLP} tools predicting stroke phenotypes in radiology reports},
journal = {Frontiers Digit. Health},
volume = {5},
year = {2023},
url = {https://doi.org/10.3389/fdgth.2023.1184919},
doi = {10.3389/FDGTH.2023.1184919},
timestamp = {Sun, 07 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/fdgth/CaseyDGTGZSOLWPFCWWMWA23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fdgth/ZhangCGSMMWGA23,
author = {Huayu Zhang and
Arlene Casey and
Imane Guellil and
V{\'{\i}}ctor Su{\'{a}}rez{-}Paniagua and
Clare Macrae and
Charis Marwick and
Honghan Wu and
Bruce Guthrie and
Beatrice Alex},
title = {{FLAP:} a framework for linking free-text addresses to the Ordnance
Survey Unique Property Reference Number database},
journal = {Frontiers Digit. Health},
volume = {5},
year = {2023},
url = {https://doi.org/10.3389/fdgth.2023.1186208},
doi = {10.3389/FDGTH.2023.1186208},
timestamp = {Sun, 07 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/fdgth/ZhangCGSMMWGA23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijmi/AlsalehACHMWT23,
author = {Mohanad M. Alsaleh and
Freya Allery and
Jung Won Choi and
Tuankasfee Hama and
Andrew McQuillin and
Honghan Wu and
Johan H. Thygesen},
title = {Prediction of disease comorbidity using explainable artificial intelligence
and machine learning techniques: {A} systematic review},
journal = {Int. J. Medical Informatics},
volume = {175},
pages = {105088},
year = {2023},
url = {https://doi.org/10.1016/j.ijmedinf.2023.105088},
doi = {10.1016/J.IJMEDINF.2023.105088},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijmi/AlsalehACHMWT23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/DongSZWCDCAWW23,
author = {Hang Dong and
V{\'{\i}}ctor Su{\'{a}}rez{-}Paniagua and
Huayu Zhang and
Minhong Wang and
Arlene Casey and
Emma M. Davidson and
Jiaoyan Chen and
Beatrice Alex and
William Whiteley and
Honghan Wu},
title = {Ontology-driven and weakly supervised rare disease identification
from clinical notes},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {23},
number = {1},
pages = {86},
year = {2023},
url = {https://doi.org/10.1186/s12911-023-02181-9},
doi = {10.1186/S12911-023-02181-9},
timestamp = {Sat, 20 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/DongSZWCDCAWW23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/npjdm/SylolypavanSWS23,
author = {Aneeta Sylolypavan and
Derek H. Sleeman and
Honghan Wu and
Malcolm Sim},
title = {The impact of inconsistent human annotations on {AI} driven clinical
decision making},
journal = {npj Digit. Medicine},
volume = {6},
year = {2023},
url = {https://doi.org/10.1038/s41746-023-00773-3},
doi = {10.1038/S41746-023-00773-3},
timestamp = {Sat, 13 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/npjdm/SylolypavanSWS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bionlp/WuSHW23,
author = {Jinge Wu and
Daqian Shi and
Abul Hasan and
Honghan Wu},
editor = {Dina Demner{-}Fushman and
Sophia Ananiadou and
Kevin Cohen},
title = {KnowLab at RadSum23: comparing pre-trained language models in radiology
report summarization},
booktitle = {The 22nd Workshop on Biomedical Natural Language Processing and BioNLP
Shared Tasks, BioNLP@ACL 2023, Toronto, Canada, 13 July 2023},
pages = {535--540},
publisher = {Association for Computational Linguistics},
year = {2023},
url = {https://doi.org/10.18653/v1/2023.bionlp-1.54},
doi = {10.18653/V1/2023.BIONLP-1.54},
timestamp = {Thu, 10 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bionlp/WuSHW23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/embc/FrancisLWTS23,
author = {Farah Francis and
Saturnino Luz and
Honghan Wu and
Rosemary Townsend and
Sarah S. Stock},
title = {Machine Learning to Classify Cardiotocography for Fetal Hypoxia Detection},
booktitle = {45th Annual International Conference of the {IEEE} Engineering in
Medicine {\&} Biology Society, {EMBC} 2023, Sydney, Australia,
July 24-27, 2023},
pages = {1--4},
publisher = {{IEEE}},
year = {2023},
url = {https://doi.org/10.1109/EMBC40787.2023.10340803},
doi = {10.1109/EMBC40787.2023.10340803},
timestamp = {Thu, 11 Jan 2024 15:01:18 +0100},
biburl = {https://dblp.org/rec/conf/embc/FrancisLWTS23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/kdh/2023,
editor = {Zina M. Ibrahim and
Honghan Wu and
Nirmalie Wiratunga},
title = {Proceedings of the 6th International Workshop on Knowledge Discovery
from Healthcare Data co-located with 32nd International Joint Conference
on Artificial Intelligence {(IJCAI} 2023), Macao, China, August 20,
2023},
series = {{CEUR} Workshop Proceedings},
volume = {3479},
publisher = {CEUR-WS.org},
year = {2023},
url = {https://ceur-ws.org/Vol-3479},
urn = {urn:nbn:de:0074-3479-9},
timestamp = {Wed, 13 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/kdh/2023.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2312-12989,
author = {Emily Groves and
Minhong Wang and
Yusuf Abdulle and
Holger Kunz and
Jason Hoelscher{-}Obermaier and
Ronin Wu and
Honghan Wu},
title = {Benchmarking and Analyzing In-context Learning, Fine-tuning and Supervised
Learning for Biomedical Knowledge Curation: a focused study on chemical
entities of biological interest},
journal = {CoRR},
volume = {abs/2312.12989},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2312.12989},
doi = {10.48550/ARXIV.2312.12989},
eprinttype = {arXiv},
eprint = {2312.12989},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2312-12989.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2312-13103,
author = {Jinge Wu and
Yunsoo Kim and
Eva C. Keller and
Jamie Chow and
Adam P. Levine and
Nikolas Pontikos and
Zina M. Ibrahim and
Paul Taylor and
Michelle C. Williams and
Honghan Wu},
title = {Exploring Multimodal Large Language Models for Radiology Report Error-checking},
journal = {CoRR},
volume = {abs/2312.13103},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2312.13103},
doi = {10.48550/ARXIV.2312.13103},
eprinttype = {arXiv},
eprint = {2312.13103},
timestamp = {Wed, 17 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2312-13103.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/ChenALIDFKXZBBB22,
author = {Qingyu Chen and
Alexis Allot and
Robert Leaman and
Rezarta Islamaj and
Jingcheng Du and
Li Fang and
Wang Kai and
Shuo Xu and
Yuefu Zhang and
Parsa Bagherzadeh and
Sabine Bergler and
Aakash Bhatnagar and
Nidhir Bhavsar and
Yung{-}Chun Chang and
Sheng{-}Jie Lin and
Wentai Tang and
Hongtong Zhang and
Ilija Tavchioski and
Senja Pollak and
Shubo Tian and
Jinfeng Zhang and
Yulia Otmakhova and
Antonio Jimeno{-}Yepes and
Hang Dong and
Honghan Wu and
Richard Dufour and
Yanis Labrak and
Niladri Chatterjee and
Kushagri Tandon and
Fr{\'{e}}jus A. A. Laleye and
Lo{\"{\i}}c Rakotoson and
Emmanuele Chersoni and
Jinghang Gu and
Annemarie Friedrich and
Subhash Chandra Pujari and
Mariia Chizhikova and
Naveen Sivadasan and
Saipradeep Vg and
Zhiyong Lu},
title = {Multi-label classification for biomedical literature: an overview
of the BioCreative {VII} LitCovid Track for {COVID-19} literature
topic annotations},
journal = {Database J. Biol. Databases Curation},
volume = {2022},
number = {2022},
year = {2022},
url = {https://doi.org/10.1093/database/baac069},
doi = {10.1093/DATABASE/BAAC069},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/ChenALIDFKXZBBB22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cmig/KuangCWLLCCWYWL22,
author = {Xihe Kuang and
Jason Pui Yin Cheung and
Kwan{-}Yee K. Wong and
Wai Yi Lam and
Chak Hei Lam and
Richard W. Choy and
Christopher P. Cheng and
Honghan Wu and
Cao Yang and
Kun Wang and
Yang Li and
Teng Zhang},
title = {Spine-GFlow: {A} hybrid learning framework for robust multi-tissue
segmentation in lumbar {MRI} without manual annotation},
journal = {Comput. Medical Imaging Graph.},
volume = {99},
pages = {102091},
year = {2022},
url = {https://doi.org/10.1016/j.compmedimag.2022.102091},
doi = {10.1016/J.COMPMEDIMAG.2022.102091},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cmig/KuangCWLLCCWYWL22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/npjdm/0002FWAMJCW22,
author = {Hang Dong and
Mat{\'{u}}s Falis and
William Whiteley and
Beatrice Alex and
Joshua Matterson and
Shaoxiong Ji and
Jiaoyan Chen and
Honghan Wu},
title = {Automated clinical coding: what, why, and where we are?},
journal = {npj Digit. Medicine},
volume = {5},
year = {2022},
url = {https://doi.org/10.1038/s41746-022-00705-7},
doi = {10.1038/S41746-022-00705-7},
timestamp = {Sun, 16 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/npjdm/0002FWAMJCW22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/npjdm/Wu0WFCS0PFLSHKG22,
author = {Honghan Wu and
Minhong Wang and
Jinge Wu and
Farah Francis and
Yun{-}Hsuan Chang and
Alex Shavick and
Hang Dong and
Michael Tin Chung Poon and
Natalie K. Fitzpatrick and
Adam P. Levine and
Luke T. Slater and
Alex Handy and
Andreas Karwath and
Georgios V. Gkoutos and
Claude Chelala and
Anoop D. Shah and
Robert Stewart and
Nigel Collier and
Beatrice Alex and
William Whiteley and
Cathie Sudlow and
Angus Roberts and
Richard J. B. Dobson},
title = {A survey on clinical natural language processing in the United Kingdom
from 2007 to 2022},
journal = {npj Digit. Medicine},
volume = {5},
year = {2022},
url = {https://doi.org/10.1038/s41746-022-00730-6},
doi = {10.1038/S41746-022-00730-6},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/npjdm/Wu0WFCS0PFLSHKG22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/titb/IbrahimBSQWSKGN22,
author = {Zina M. Ibrahim and
Daniel Bean and
Thomas Searle and
Linglong Qian and
Honghan Wu and
Anthony Shek and
Zeljko Kraljevic and
James Galloway and
Sam Norton and
James T. Teo and
Richard J. B. Dobson},
title = {A Knowledge Distillation Ensemble Framework for Predicting Short-
and Long-Term Hospitalization Outcomes From Electronic Health Records
Data},
journal = {{IEEE} J. Biomed. Health Informatics},
volume = {26},
number = {1},
pages = {423--435},
year = {2022},
url = {https://doi.org/10.1109/JBHI.2021.3089287},
doi = {10.1109/JBHI.2021.3089287},
timestamp = {Thu, 27 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/titb/IbrahimBSQWSKGN22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cinc/FrancisWLTS22,
author = {Farah Francis and
Honghan Wu and
Saturnino Luz and
Rosemary Townsend and
Sarah S. Stock},
title = {Detecting Intrapartum Fetal Hypoxia from Cardiotocography Using Machine
Learning},
booktitle = {Computing in Cardiology, CinC 2022, Tampere, Finland, September 4-7,
2022},
pages = {1--4},
publisher = {{IEEE}},
year = {2022},
url = {https://doi.org/10.22489/CinC.2022.339},
doi = {10.22489/CINC.2022.339},
timestamp = {Thu, 11 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cinc/FrancisWLTS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/coling/GuellilWWSA22,
author = {Imane Guellil and
Jinge Wu and
Honghan Wu and
Tony Sun and
Beatrice Alex},
editor = {Graciela Gonzalez{-}Hernandez and
Davy Weissenbacher},
title = {Edinburgh{\_}UCL{\_}Health@SMM4H'22: From Glove to Flair for handling
imbalanced healthcare corpora related to Adverse Drug Events, Change
in medication and self-reporting vaccination},
booktitle = {Proceedings of The Seventh Workshop on Social Media Mining for Health
Applications, Workshop {\&} Shared Task, SMM4H@COLING 2022, Gyeongju,
Republic of Korea, October 12 - 17, 2022},
pages = {148--152},
publisher = {Association for Computational Linguistics},
year = {2022},
url = {https://aclanthology.org/2022.smm4h-1.40},
timestamp = {Thu, 20 Oct 2022 17:06:19 +0200},
biburl = {https://dblp.org/rec/conf/coling/GuellilWWSA22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ijcai/WuS0W22,
author = {Honghan Wu and
Aneeta Sylolypavan and
Minhong Wang and
Sarah Wild},
editor = {Luc De Raedt},
title = {Quantifying Health Inequalities Induced by Data and {AI} Models},
booktitle = {Proceedings of the Thirty-First International Joint Conference on
Artificial Intelligence, {IJCAI} 2022, Vienna, Austria, 23-29 July
2022},
pages = {5192--5198},
publisher = {ijcai.org},
year = {2022},
url = {https://doi.org/10.24963/ijcai.2022/721},
doi = {10.24963/IJCAI.2022/721},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ijcai/WuS0W22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2201-02797,
author = {Shaoxiong Ji and
Wei Sun and
Hang Dong and
Honghan Wu and
Pekka Marttinen},
title = {A Unified Review of Deep Learning for Automated Medical Coding},
journal = {CoRR},
volume = {abs/2201.02797},
year = {2022},
url = {https://arxiv.org/abs/2201.02797},
eprinttype = {arXiv},
eprint = {2201.02797},
timestamp = {Fri, 12 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2201-02797.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2203-11092,
author = {Hang Dong and
Mat{\'{u}}s Falis and
William Whiteley and
Beatrice Alex and
Shaoxiong Ji and
Jiaoyan Chen and
Honghan Wu},
title = {Automated Clinical Coding: What, Why, and Where We Are?},
journal = {CoRR},
volume = {abs/2203.11092},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2203.11092},
doi = {10.48550/ARXIV.2203.11092},
eprinttype = {arXiv},
eprint = {2203.11092},
timestamp = {Wed, 28 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2203-11092.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2204-09781,
author = {Qingyu Chen and
Alexis Allot and
Robert Leaman and
Rezarta Islamaj Dogan and
Jingcheng Du and
Li Fang and
Wang Kai and
Shuo Xu and
Yuefu Zhang and
Parsa Bagherzadeh and
Sabine Bergler and
Aakash Bhatnagar and
Nidhir Bhavsar and
Yung{-}Chun Chang and
Sheng{-}Jie Lin and
Wentai Tang and
Hongtong Zhang and
Ilija Tavchioski and
Shubo Tian and
Jinfeng Zhang and
Yulia Otmakhova and
Antonio Jimeno{-}Yepes and
Hang Dong and
Honghan Wu and
Richard Dufour and
Yanis Labrak and
Niladri Chatterjee and
Kushagri Tandon and
Fr{\'{e}}jus A. A. Laleye and
Lo{\"{\i}}c Rakotoson and
Emmanuele Chersoni and
Jinghang Gu and
Annemarie Friedrich and
Subhash Chandra Pujari and
Mariia Chizhikova and
Naveen Sivadasan and
Zhiyong Lu},
title = {Multi-label classification for biomedical literature: an overview
of the BioCreative {VII} LitCovid Track for {COVID-19} literature
topic annotations},
journal = {CoRR},
volume = {abs/2204.09781},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2204.09781},
doi = {10.48550/ARXIV.2204.09781},
eprinttype = {arXiv},
eprint = {2204.09781},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2204-09781.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2205-01066,
author = {Honghan Wu and
Minhong Wang and
Aneeta Sylolypavan and
Sarah Wild},
title = {Quantifying Health Inequalities Induced by Data and {AI} Models},
journal = {CoRR},
volume = {abs/2205.01066},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2205.01066},
doi = {10.48550/ARXIV.2205.01066},
eprinttype = {arXiv},
eprint = {2205.01066},
timestamp = {Tue, 03 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2205-01066.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2205-05656,
author = {Hang Dong and
V{\'{\i}}ctor Su{\'{a}}rez{-}Paniagua and
Huayu Zhang and
Minhong Wang and
Arlene Casey and
Emma M. Davidson and
Jiaoyan Chen and
Beatrice Alex and
William Whiteley and
Honghan Wu},
title = {Ontology-Based and Weakly Supervised Rare Disease Phenotyping from
Clinical Notes},
journal = {CoRR},
volume = {abs/2205.05656},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2205.05656},
doi = {10.48550/ARXIV.2205.05656},
eprinttype = {arXiv},
eprint = {2205.05656},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2205-05656.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2208-11466,
author = {Jinge Wu and
Rowena Smith and
Honghan Wu},
title = {Adverse Childhood Experiences Identification from Clinical Notes with
Ontologies and {NLP}},
journal = {CoRR},
volume = {abs/2208.11466},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2208.11466},
doi = {10.48550/ARXIV.2208.11466},
eprinttype = {arXiv},
eprint = {2208.11466},
timestamp = {Tue, 30 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2208-11466.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2208-11701,
author = {Jinge Wu and
Rowena Smith and
Honghan Wu},
title = {Ontology-Driven Self-Supervision for Adverse Childhood Experiences
Identification Using Social Media Datasets},
journal = {CoRR},
volume = {abs/2208.11701},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2208.11701},
doi = {10.48550/ARXIV.2208.11701},
eprinttype = {arXiv},
eprint = {2208.11701},
timestamp = {Tue, 30 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2208-11701.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/ZhangFRJZSSRW21,
author = {Huayu Zhang and
Amy Ferguson and
Grant Robertson and
Muchen Jiang and
Teng Zhang and
Cathie Sudlow and
Keith Smith and
Kristiina Rannikm{\"{a}}e and
Honghan Wu},
title = {Benchmarking network-based gene prioritization methods for cerebral
small vessel disease},
journal = {Briefings Bioinform.},
volume = {22},
number = {5},
year = {2021},
url = {https://doi.org/10.1093/bib/bbab006},
doi = {10.1093/BIB/BBAB006},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/ZhangFRJZSSRW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcmi/DavidsonPCGDDSG21,
author = {Emma M. Davidson and
Michael Tin Chung Poon and
Arlene Casey and
Andreas Grivas and
Daniel Duma and
Hang Dong and
V{\'{\i}}ctor Su{\'{a}}rez{-}Paniagua and
Claire Grover and
Richard Tobin and
Heather Whalley and
Honghan Wu and
Beatrice Alex and
William Whiteley},
title = {The reporting quality of natural language processing studies: systematic
review of studies of radiology reports},
journal = {{BMC} Medical Imaging},
volume = {21},
number = {1},
pages = {142},
year = {2021},
url = {https://doi.org/10.1186/s12880-021-00671-8},
doi = {10.1186/S12880-021-00671-8},
timestamp = {Tue, 18 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcmi/DavidsonPCGDDSG21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/WuZKISZWSDBCLTB21,
author = {Honghan Wu and
Huayu Zhang and
Andreas Karwath and
Zina M. Ibrahim and
Ting Shi and
Xin Zhang and
Kun Wang and
Jiaxing Sun and
Kevin Dhaliwal and
Daniel Bean and
Victor Roth Cardoso and
Kezhi Li and
James T. Teo and
Amitava Banerjee and
Fang Gao{-}Smith and
Tony Whitehouse and
Tonny Veenith and
Georgios V. Gkoutos and
Xiaodong Wu and
Richard J. B. Dobson and
Bruce Guthrie},
title = {Ensemble learning for poor prognosis predictions: {A} case study on
SARS-CoV-2},
journal = {J. Am. Medical Informatics Assoc.},
volume = {28},
number = {4},
pages = {791--800},
year = {2021},
url = {https://doi.org/10.1093/jamia/ocaa295},
doi = {10.1093/JAMIA/OCAA295},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jamia/WuZKISZWSDBCLTB21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jbi/DongSWW21,
author = {Hang Dong and
V{\'{\i}}ctor Su{\'{a}}rez{-}Paniagua and
William Whiteley and
Honghan Wu},
title = {Explainable automated coding of clinical notes using hierarchical
label-wise attention networks and label embedding initialisation},
journal = {J. Biomed. Informatics},
volume = {116},
pages = {103728},
year = {2021},
url = {https://doi.org/10.1016/j.jbi.2021.103728},
doi = {10.1016/J.JBI.2021.103728},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jbi/DongSWW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/CaseyDPDDGGSTWW21,
author = {Arlene Casey and
Emma M. Davidson and
Michael Tin Chung Poon and
Hang Dong and
Daniel Duma and
Andreas Grivas and
Claire Grover and
V{\'{\i}}ctor Su{\'{a}}rez{-}Paniagua and
Richard Tobin and
William Whiteley and
Honghan Wu and
Beatrice Alex},
title = {A systematic review of natural language processing applied to radiology
reports},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {21},
number = {1},
pages = {179},
year = {2021},
url = {https://doi.org/10.1186/s12911-021-01533-7},
doi = {10.1186/S12911-021-01533-7},
timestamp = {Tue, 18 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/CaseyDPDDGGSTWW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/RannikmaeWTWAS21,
author = {Kristiina Rannikm{\"{a}}e and
Honghan Wu and
Steven Tominey and
William Whiteley and
Naomi Allen and
Cathie Sudlow},
title = {Developing automated methods for disease subtyping in {UK} Biobank:
an exemplar study on stroke},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {21},
number = {1},
pages = {191},
year = {2021},
url = {https://doi.org/10.1186/s12911-021-01556-0},
doi = {10.1186/S12911-021-01556-0},
timestamp = {Thu, 23 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/RannikmaeWTWAS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/amia/WhitfieldCZSWLW21,
author = {Emma Whitfield and
Claire Coffey and
Huayu Zhang and
Ting Shi and
Xiaodong Wu and
Qiang Li and
Honghan Wu},
title = {Axes of Prognosis: Identifying Subtypes of {COVID-19} Outcomes},
booktitle = {{AMIA} 2021, American Medical Informatics Association Annual Symposium,
San Diego, CA, USA, October 30, 2021 - November 3, 2021},
publisher = {{AMIA}},
year = {2021},
url = {https://knowledge.amia.org/74229-amia-1.4622266/t003-1.4626466/t003-1.4626467/3575824-1.4626495/3577143-1.4626492},
timestamp = {Wed, 17 Apr 2024 11:46:53 +0200},
biburl = {https://dblp.org/rec/conf/amia/WhitfieldCZSWLW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/embc/DongSZWWW21,
author = {Hang Dong and
V{\'{\i}}ctor Su{\'{a}}rez{-}Paniagua and
Huayu Zhang and
Minhong Wang and
Emma Whitfield and
Honghan Wu},
title = {Rare Disease Identification from Clinical Notes with Ontologies and
Weak Supervision},
booktitle = {43rd Annual International Conference of the {IEEE} Engineering in
Medicine {\&} Biology Society, {EMBC} 2021, Mexico, November 1-5,
2021},
pages = {2294--2298},
publisher = {{IEEE}},
year = {2021},
url = {https://doi.org/10.1109/EMBC46164.2021.9630043},
doi = {10.1109/EMBC46164.2021.9630043},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/embc/DongSZWWW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2102-09553,
author = {Arlene Casey and
Emma M. Davidson and
Michael Tin Chung Poon and
Hang Dong and
Daniel Duma and
Andreas Grivas and
Claire Grover and
V{\'{\i}}ctor Su{\'{a}}rez{-}Paniagua and
Richard Tobin and
William Whiteley and
Honghan Wu and
Beatrice Alex},
title = {A Systematic Review of Natural Language Processing Applied to Radiology
Reports},
journal = {CoRR},
volume = {abs/2102.09553},
year = {2021},
url = {https://arxiv.org/abs/2102.09553},
eprinttype = {arXiv},
eprint = {2102.09553},
timestamp = {Tue, 18 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2102-09553.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2105-01995,
author = {Hang Dong and
V{\'{\i}}ctor Su{\'{a}}rez{-}Paniagua and
Huayu Zhang and
Minhong Wang and
Emma Whitfield and
Honghan Wu},
title = {Rare Disease Identification from Clinical Notes with Ontologies and
Weak Supervision},
journal = {CoRR},
volume = {abs/2105.01995},
year = {2021},
url = {https://arxiv.org/abs/2105.01995},
eprinttype = {arXiv},
eprint = {2105.01995},
timestamp = {Wed, 28 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2105-01995.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/IbrahimWHSDA20,
author = {Zina M. Ibrahim and
Honghan Wu and
Ahmed Hamoud and
Lukas Stappen and
Richard J. B. Dobson and
Andrea Agarossi},
title = {On classifying sepsis heterogeneity in the {ICU:} insight using machine
learning},
journal = {J. Am. Medical Informatics Assoc.},
volume = {27},
number = {3},
pages = {437--443},
year = {2020},
url = {https://doi.org/10.1093/jamia/ocz211},
doi = {10.1093/JAMIA/OCZ211},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/IbrahimWHSDA20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ecai/IbrahimWD20,
author = {Zina M. Ibrahim and
Honghan Wu and
Richard J. B. Dobson},
editor = {Giuseppe De Giacomo and
Alejandro Catal{\'{a}} and
Bistra Dilkina and
Michela Milano and
Sen{\'{e}}n Barro and
Alberto Bugar{\'{\i}}n and
J{\'{e}}r{\^{o}}me Lang},
title = {Modeling Rare Interactions in Time Series Data Through Qualitative
Change: Application to Outcome Prediction in Intensive Care Units},
booktitle = {{ECAI} 2020 - 24th European Conference on Artificial Intelligence,
29 August-8 September 2020, Santiago de Compostela, Spain, August
29 - September 8, 2020 - Including 10th Conference on Prestigious
Applications of Artificial Intelligence {(PAIS} 2020)},
series = {Frontiers in Artificial Intelligence and Applications},
volume = {325},
pages = {1826--1833},
publisher = {{IOS} Press},
year = {2020},
url = {https://doi.org/10.3233/FAIA200298},
doi = {10.3233/FAIA200298},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ecai/IbrahimWD20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/embc/KuangCWDZ20,
author = {Xihe Kuang and
Jason Pui Yin Cheung and
Honghan Wu and
Socrates Dokos and
Teng Zhang},
title = {MRI-SegFlow: a novel unsupervised deep learning pipeline enabling
accurate vertebral segmentation of {MRI} images},
booktitle = {42nd Annual International Conference of the {IEEE} Engineering in
Medicine {\&} Biology Society, {EMBC} 2020, Montreal, QC, Canada,
July 20-24, 2020},
pages = {1633--1636},
publisher = {{IEEE}},
year = {2020},
url = {https://doi.org/10.1109/EMBC44109.2020.9175987},
doi = {10.1109/EMBC44109.2020.9175987},
timestamp = {Thu, 27 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/embc/KuangCWDZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mie/WuWZCNJBBPSR20,
author = {Honghan Wu and
Minhong Wang and
Qianyi Zeng and
Wenjun Chen and
Thomas Nind and
Emily R. Jefferson and
Marion Bennie and
Corri Black and
Jeff Z. Pan and
Cathie Sudlow and
Dave Robertson},
editor = {Louise Bilenberg Pape{-}Haugaard and
Christian Lovis and
Inge Cort Madsen and
Patrick Weber and
Per Hostrup Nielsen and
Philip Scott},
title = {Knowledge Driven Phenotyping},
booktitle = {Digital Personalized Health and Medicine - Proceedings of {MIE} 2020,
Medical Informatics Europe, Geneva, Switzerland, April 28 - May 1,
2020},
series = {Studies in Health Technology and Informatics},
volume = {270},
pages = {1327--1328},
publisher = {{IOS} Press},
year = {2020},
url = {https://doi.org/10.3233/SHTI200425},
doi = {10.3233/SHTI200425},
timestamp = {Thu, 04 Apr 2024 17:06:52 +0200},
biburl = {https://dblp.org/rec/conf/mie/WuWZCNJBBPSR20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2002-08901,
author = {Rebecca Bendayan and
Honghan Wu and
Zeljko Kraljevic and
Robert Stewart and
Tom Searle and
Jaya Chaturvedi and
Jayati Das{-}Munshi and
Zina M. Ibrahim and
Aurelie Mascio and
Angus Roberts and
Daniel Bean and
Richard J. B. Dobson},
title = {Identifying physical health comorbidities in a cohort of individuals
with severe mental illness: An application of SemEHR},
journal = {CoRR},
volume = {abs/2002.08901},
year = {2020},
url = {https://arxiv.org/abs/2002.08901},
eprinttype = {arXiv},
eprint = {2002.08901},
timestamp = {Thu, 25 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2002-08901.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2004-01431,
author = {Zina M. Ibrahim and
Honghan Wu and
Richard J. B. Dobson},
title = {Modeling Rare Interactions in Time Series Data Through Qualitative
Change: Application to Outcome Prediction in Intensive Care Units},
journal = {CoRR},
volume = {abs/2004.01431},
year = {2020},
url = {https://arxiv.org/abs/2004.01431},
eprinttype = {arXiv},
eprint = {2004.01431},
timestamp = {Thu, 25 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2004-01431.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2010-15728,
author = {Hang Dong and
V{\'{\i}}ctor Su{\'{a}}rez{-}Paniagua and
William Whiteley and
Honghan Wu},
title = {Explainable Automated Coding of Clinical Notes using Hierarchical
Label-wise Attention Networks and Label Embedding Initialisation},
journal = {CoRR},
volume = {abs/2010.15728},
year = {2020},
url = {https://arxiv.org/abs/2010.15728},
eprinttype = {arXiv},
eprint = {2010.15728},
timestamp = {Wed, 28 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2010-15728.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2011-09361,
author = {Zina M. Ibrahim and
Daniel Bean and
Thomas Searle and
Honghan Wu and
Anthony Shek and
Zeljko Kraljevic and
James Galloway and
Sam Norton and
James T. Teo and
Richard J. B. Dobson},
title = {A Knowledge Distillation Ensemble Framework for Predicting Short and
Long-term Hospitalisation Outcomes from Electronic Health Records
Data},
journal = {CoRR},
volume = {abs/2011.09361},
year = {2020},
url = {https://arxiv.org/abs/2011.09361},
eprinttype = {arXiv},
eprint = {2011.09361},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2011-09361.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1903-03985,
author = {Philip John Gorinski and
Honghan Wu and
Claire Grover and
Richard Tobin and
Conn Talbot and
Heather Whalley and
Cathie Sudlow and
William Whiteley and
Beatrice Alex},
title = {Named Entity Recognition for Electronic Health Records: {A} Comparison
of Rule-based and Machine Learning Approaches},
journal = {CoRR},
volume = {abs/1903.03985},
year = {2019},
url = {http://arxiv.org/abs/1903.03985},
eprinttype = {arXiv},
eprint = {1903.03985},
timestamp = {Sat, 23 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-1903-03985.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1903-03995,
author = {Honghan Wu and
Karen Hodgson and
Sue Dyson and
Katherine I. Morley and
Zina M. Ibrahim and
Ehtesham Iqbal and
Robert Stewart and
Richard J. B. Dobson and
Cathie Sudlow},
title = {Contextualised concept embedding for efficiently adapting natural
language processing models for phenotype identification},
journal = {CoRR},
volume = {abs/1903.03995},
year = {2019},
url = {http://arxiv.org/abs/1903.03995},
eprinttype = {arXiv},
eprint = {1903.03995},
timestamp = {Mon, 24 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1903-03995.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1912-00672,
author = {Zina M. Ibrahim and
Honghan Wu and
Ahmed Hamoud and
Lukas Stappen and
Richard J. B. Dobson and
Andrea Agarossi},
title = {On Classifying Sepsis Heterogeneity in the {ICU:} Insight Using Machine
Learning},
journal = {CoRR},
volume = {abs/1912.00672},
year = {2019},
url = {http://arxiv.org/abs/1912.00672},
eprinttype = {arXiv},
eprint = {1912.00672},
timestamp = {Tue, 07 Jan 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-1912-00672.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jamia/WuTMIFJKASGGRBS18,
author = {Honghan Wu and
Giulia Toti and
Katherine I. Morley and
Zina M. Ibrahim and
Amos Folarin and
Richard G. Jackson and
Ismail Emre Kartoglu and
Asha Agrawal and
Clive Stringer and
Darren Gale and
Genevieve Gorrell and
Angus Roberts and
Matthew T. M. Broadbent and
Robert Stewart and
Richard J. B. Dobson},
title = {SemEHR: {A} general-purpose semantic search system to surface semantic
data from clinical notes for tailored care, trial recruitment, and
clinical research},
journal = {J. Am. Medical Informatics Assoc.},
volume = {25},
number = {5},
pages = {530--537},
year = {2018},
url = {https://doi.org/10.1093/jamia/ocx160},
doi = {10.1093/JAMIA/OCX160},
timestamp = {Mon, 09 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jamia/WuTMIFJKASGGRBS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/midm/JacksonKSGRSWAL18,
author = {Richard G. Jackson and
Ismail Emre Kartoglu and
Clive Stringer and
Genevieve Gorrell and
Angus Roberts and
Xingyi Song and
Honghan Wu and
Asha Agrawal and
Kenneth Lui and
Tudor Groza and
Damian Lewsley and
Doug Northwood and
Amos Folarin and
Robert Stewart and
Richard J. B. Dobson},
title = {CogStack - experiences of deploying integrated information retrieval
and extraction services in a large National Health Service Foundation
Trust hospital},
journal = {{BMC} Medical Informatics Decis. Mak.},
volume = {18},
number = {1},
pages = {47:1--47:13},
year = {2018},
url = {https://doi.org/10.1186/s12911-018-0623-9},
doi = {10.1186/S12911-018-0623-9},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/midm/JacksonKSGRSWAL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/ijcai/2018khd,
editor = {Kerstin Bach and
Razvan C. Bunescu and
Oladimeji Farri and
Aili Guo and
Sadid A. Hasan and
Zina M. Ibrahim and
Cindy Marling and
Jesse Raffa and
Jonathan Rubin and
Honghan Wu},
title = {Proceedings of the 3rd International Workshop on Knowledge Discovery
in Healthcare Data co-located with the 27th International Joint Conference
on Artificial Intelligence and the 23rd European Conference on Artificial
Intelligence {(IJCAI-ECAI} 2018), Stockholm, Schweden, July 13, 2018},
series = {{CEUR} Workshop Proceedings},
volume = {2148},
publisher = {CEUR-WS.org},
year = {2018},
url = {https://ceur-ws.org/Vol-2148},
urn = {urn:nbn:de:0074-2148-8},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ijcai/2018khd.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/biodb/WuOGBHD17,
author = {Honghan Wu and
Anika Oellrich and
Christine Girges and
Bernard de Bono and
Tim J. P. Hubbard and
Richard J. B. Dobson},
title = {Automated {PDF} highlighting to support faster curation of literature
for Parkinson's and Alzheimer's disease},
journal = {Database J. Biol. Databases Curation},
volume = {2017},
pages = {bax027},
year = {2017},
url = {https://doi.org/10.1093/database/bax027},
doi = {10.1093/DATABASE/BAX027},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/biodb/WuOGBHD17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ehealth/PandeyIWID17,
author = {Chandra Pandey and
Zina M. Ibrahim and
Honghan Wu and
Ehtesham Iqbal and
Richard J. B. Dobson},
editor = {Patty Kostkova and
Floriana Grasso and
Carlos Castillo and
Yelena Mejova and
Arnold Bosman},
title = {Improving {RNN} with Attention and Embedding for Adverse Drug Reactions},
booktitle = {Proceedings of the 2017 International Conference on Digital Health,
London, United Kingdom, July 2-5, 2017},
pages = {67--71},
publisher = {{ACM}},
year = {2017},
url = {https://doi.org/10.1145/3079452.3079501},
doi = {10.1145/3079452.3079501},
timestamp = {Mon, 24 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ehealth/PandeyIWID17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ijcai/WangSOWD17,
author = {Hui Wang and
Quan Sun and
Anika Oellrich and
Honghan Wu and
Richard J. B. Dobson},
editor = {Zina M. Ibrahim and
Honghan Wu and
Kerstin Bach and
Richard J. B. Dobson and
Spiros C. Denaxas and
Nirmalie Wiratunga and
Stewart Massie and
Sadiq Sani},
title = {The psycho-env corpus: research articles annotated for knowledge discovery
on correlating mental diseases and environmental factors},
booktitle = {Proceedings of the 2nd International Workshop on Knowledge Discovery
in Healthcare Data Co-located with the 26th International Joint Conference
on Artificial Intelligence {(IJCAI} 2017), Melbourne, Australia, August
20, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {1891},
pages = {36--40},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-1891/paper6.pdf},
timestamp = {Wed, 13 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ijcai/WangSOWD17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/sp/17/Gomez-PerezPVW17,
author = {Jos{\'{e}} Manu{\'{e}}l G{\'{o}}mez{-}P{\'{e}}rez and
Jeff Z. Pan and
Guido Vetere and
Honghan Wu},
editor = {Jeff Z. Pan and
Guido Vetere and
Jos{\'{e}} Manu{\'{e}}l G{\'{o}}mez{-}P{\'{e}}rez and
Honghan Wu},
title = {Enterprise Knowledge Graph: An Introduction},
booktitle = {Exploiting Linked Data and Knowledge Graphs in Large Organisations},
pages = {1--14},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-45654-6\_1},
doi = {10.1007/978-3-319-45654-6\_1},
timestamp = {Mon, 29 Jul 2019 15:58:43 +0200},
biburl = {https://dblp.org/rec/books/sp/17/Gomez-PerezPVW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/sp/17/Villazon-TerrazasGRFWZVP17,
author = {Boris Villaz{\'{o}}n{-}Terrazas and
Nuria Garc{\'{\i}}a{-}Santa and
Yuan Ren and
Alessandro Faraotti and
Honghan Wu and
Yuting Zhao and
Guido Vetere and
Jeff Z. Pan},
editor = {Jeff Z. Pan and
Guido Vetere and
Jos{\'{e}} Manu{\'{e}}l G{\'{o}}mez{-}P{\'{e}}rez and
Honghan Wu},
title = {Knowledge Graph Foundations},
booktitle = {Exploiting Linked Data and Knowledge Graphs in Large Organisations},
pages = {17--55},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-45654-6\_2},
doi = {10.1007/978-3-319-45654-6\_2},
timestamp = {Mon, 29 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/books/sp/17/Villazon-TerrazasGRFWZVP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/sp/17/DenauxRVAFW17,
author = {Ronald Denaux and
Yuan Ren and
Boris Villaz{\'{o}}n{-}Terrazas and
Panos Alexopoulos and
Alessandro Faraotti and
Honghan Wu},
editor = {Jeff Z. Pan and
Guido Vetere and
Jos{\'{e}} Manu{\'{e}}l G{\'{o}}mez{-}P{\'{e}}rez and
Honghan Wu},
title = {Knowledge Architecture for Organisations},
booktitle = {Exploiting Linked Data and Knowledge Graphs in Large Organisations},
pages = {57--84},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-45654-6\_3},
doi = {10.1007/978-3-319-45654-6\_3},
timestamp = {Mon, 29 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/books/sp/17/DenauxRVAFW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/sp/17/WuDARP17,
author = {Honghan Wu and
Ronald Denaux and
Panos Alexopoulos and
Yuan Ren and
Jeff Z. Pan},
editor = {Jeff Z. Pan and
Guido Vetere and
Jos{\'{e}} Manu{\'{e}}l G{\'{o}}mez{-}P{\'{e}}rez and
Honghan Wu},
title = {Understanding Knowledge Graphs},
booktitle = {Exploiting Linked Data and Knowledge Graphs in Large Organisations},
pages = {147--180},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-45654-6\_6},
doi = {10.1007/978-3-319-45654-6\_6},
timestamp = {Mon, 29 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/books/sp/17/WuDARP17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/sp/17/MoschittiTAWNVFMPWZ17,
author = {Alessandro Moschitti and
Kateryna Tymoshenko and
Panos Alexopoulos and
Andrew D. Walker and
Massimo Nicosia and
Guido Vetere and
Alessandro Faraotti and
Marco Monti and
Jeff Z. Pan and
Honghan Wu and
Yuting Zhao},
editor = {Jeff Z. Pan and
Guido Vetere and
Jos{\'{e}} Manu{\'{e}}l G{\'{o}}mez{-}P{\'{e}}rez and
Honghan Wu},
title = {Question Answering and Knowledge Graphs},
booktitle = {Exploiting Linked Data and Knowledge Graphs in Large Organisations},
pages = {181--212},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-45654-6\_7},
doi = {10.1007/978-3-319-45654-6\_7},
timestamp = {Mon, 29 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/books/sp/17/MoschittiTAWNVFMPWZ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@incollection{DBLP:books/sp/17/PanGVWZM17,
author = {Jeff Z. Pan and
Jos{\'{e}} Manu{\'{e}}l G{\'{o}}mez{-}P{\'{e}}rez and
Guido Vetere and
Honghan Wu and
Yuting Zhao and
Marco Monti},
editor = {Jeff Z. Pan and
Guido Vetere and
Jos{\'{e}} Manu{\'{e}}l G{\'{o}}mez{-}P{\'{e}}rez and
Honghan Wu},
title = {Enterprise Knowledge Graph: Looking into the Future},
booktitle = {Exploiting Linked Data and Knowledge Graphs in Large Organisations},
pages = {237--249},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-45654-6\_9},
doi = {10.1007/978-3-319-45654-6\_9},
timestamp = {Mon, 29 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/books/sp/17/PanGVWZM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@book{DBLP:books/sp/PVGW2017,
editor = {Jeff Z. Pan and
Guido Vetere and
Jos{\'{e}} Manu{\'{e}}l G{\'{o}}mez{-}P{\'{e}}rez and
Honghan Wu},
title = {Exploiting Linked Data and Knowledge Graphs in Large Organisations},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-45654-6},
doi = {10.1007/978-3-319-45654-6},
isbn = {978-3-319-45652-2},
timestamp = {Mon, 29 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/books/sp/PVGW2017.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/ijcai/2017khd,
editor = {Zina M. Ibrahim and
Honghan Wu and
Kerstin Bach and
Richard J. B. Dobson and
Spiros C. Denaxas and
Nirmalie Wiratunga and
Stewart Massie and
Sadiq Sani},
title = {Proceedings of the 2nd International Workshop on Knowledge Discovery
in Healthcare Data Co-located with the 26th International Joint Conference
on Artificial Intelligence {(IJCAI} 2017), Melbourne, Australia, August
20, 2017},
series = {{CEUR} Workshop Proceedings},
volume = {1891},
publisher = {CEUR-WS.org},
year = {2017},
url = {https://ceur-ws.org/Vol-1891},
urn = {urn:nbn:de:0074-1891-5},
timestamp = {Fri, 10 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ijcai/2017khd.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sgai/IbrahimWMD16,
author = {Zina M. Ibrahim and
Honghan Wu and
Robbie Mallah and
Richard J. B. Dobson},
editor = {Max Bramer and
Miltos Petridis},
title = {Category-Driven Association Rule Mining},
booktitle = {Research and Development in Intelligent Systems {XXXIII} - Incorporating
Applications and Innovations in Intelligent Systems {XXIV.} Proceedings
of AI-2016, The Thirty-Sixth {SGAI} International Conference on Innovative
Techniques and Applications of Artificial Intelligence, Cambridge,
UK, December 13-15, 2016},
pages = {21--35},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-47175-4\_2},
doi = {10.1007/978-3-319-47175-4\_2},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/sgai/IbrahimWMD16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sgai/WuIID16,
author = {Honghan Wu and
Zina M. Ibrahim and
Ehtesham Iqbal and
Richard J. B. Dobson},
editor = {Max Bramer and
Miltos Petridis},
title = {Encoding Medication Episodes for Adverse Drug Event Prediction},
booktitle = {Research and Development in Intelligent Systems {XXXIII} - Incorporating
Applications and Innovations in Intelligent Systems {XXIV.} Proceedings
of AI-2016, The Thirty-Sixth {SGAI} International Conference on Innovative
Techniques and Applications of Artificial Intelligence, Cambridge,
UK, December 13-15, 2016},
pages = {245--250},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-47175-4\_18},
doi = {10.1007/978-3-319-47175-4\_18},
timestamp = {Mon, 24 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/sgai/WuIID16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/jist/ZhaoVPFMW15,
author = {Yuting Zhao and
Guido Vetere and
Jeff Z. Pan and
Alessandro Faraotti and
Marco Monti and
Honghan Wu},
editor = {Guilin Qi and
Kouji Kozaki and
Jeff Z. Pan and
Siwei Yu},
title = {Meta-Level Properties for Reasoning on Dynamic Data},
booktitle = {Semantic Technology - 5th Joint International Conference, {JIST} 2015,
Yichang, China, November 11-13, 2015, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {9544},
pages = {271--279},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-31676-5\_19},
doi = {10.1007/978-3-319-31676-5\_19},
timestamp = {Mon, 07 Jun 2021 18:40:16 +0200},
biburl = {https://dblp.org/rec/conf/jist/ZhaoVPFMW15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csemws/WuVPG14,
author = {Honghan Wu and
Boris Villaz{\'{o}}n{-}Terrazas and
Jeff Z. Pan and
Jos{\'{e}} Manu{\'{e}}l G{\'{o}}mez{-}P{\'{e}}rez},
editor = {Dongyan Zhao and
Jianfeng Du and
Haofen Wang and
Peng Wang and
Donghong Ji and
Jeff Z. Pan},
title = {Exploiting Semantic Web Datasets: {A} Graph Pattern Based Approach},
booktitle = {The Semantic Web and Web Science - 8th Chinese Conference, {CSWS}
2014, Wuhan, China, August 8-12, 2014, Revised Selected Papers},
series = {Communications in Computer and Information Science},
volume = {480},
pages = {167--173},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-662-45495-4\_15},
doi = {10.1007/978-3-662-45495-4\_15},
timestamp = {Mon, 29 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/csemws/WuVPG14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/jist/PanGRWWZ14,
author = {Jeff Z. Pan and
Jos{\'{e}} Manu{\'{e}}l G{\'{o}}mez{-}P{\'{e}}rez and
Yuan Ren and
Honghan Wu and
Haofen Wang and
Man Zhu},
editor = {Thepchai Supnithi and
Takahira Yamaguchi and
Jeff Z. Pan and
Vilas Wuwongse and
Marut Buranarach},
title = {Graph Pattern Based {RDF} Data Compression},
booktitle = {Semantic Technology - 4th Joint International Conference, {JIST} 2014,
Chiang Mai, Thailand, November 9-11, 2014. Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {8943},
pages = {239--256},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-15615-6\_18},
doi = {10.1007/978-3-319-15615-6\_18},
timestamp = {Sat, 09 Apr 2022 12:47:00 +0200},
biburl = {https://dblp.org/rec/conf/jist/PanGRWWZ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/WuVPG14,
author = {Honghan Wu and
Boris Villaz{\'{o}}n{-}Terrazas and
Jeff Z. Pan and
Jos{\'{e}} Manu{\'{e}}l G{\'{o}}mez{-}P{\'{e}}rez},
editor = {Olaf Hartig and
Aidan Hogan and
Juan F. Sequeda},
title = {How Redundant Is It? - An Empirical Analysis on Linked Datasets},
booktitle = {Proceedings of the 5th International Workshop on Consuming Linked
Data {(COLD} 2014) co-located with the 13th International Semantic
Web Conference {(ISWC} 2014), Riva del Garda, Italy, October 20, 2014},
series = {{CEUR} Workshop Proceedings},
volume = {1264},
publisher = {CEUR-WS.org},
year = {2014},
url = {https://ceur-ws.org/Vol-1264/cold2014\_WuVPG.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:04 +0100},
biburl = {https://dblp.org/rec/conf/semweb/WuVPG14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/www/ChenCZPWZ14,
author = {Jiaoyan Chen and
Huajun Chen and
Guozhou Zheng and
Jeff Z. Pan and
Honghan Wu and
Ningyu Zhang},
editor = {Chin{-}Wan Chung and
Andrei Z. Broder and
Kyuseok Shim and
Torsten Suel},
title = {Big smog meets web science: smog disaster analysis based on social
media and device data on the web},
booktitle = {23rd International World Wide Web Conference, {WWW} '14, Seoul, Republic
of Korea, April 7-11, 2014, Companion Volume},
pages = {505--510},
publisher = {{ACM}},
year = {2014},
url = {https://doi.org/10.1145/2567948.2576941},
doi = {10.1145/2567948.2576941},
timestamp = {Tue, 27 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/www/ChenCZPWZ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kcap/PanRWZ13,
author = {Jeff Z. Pan and
Yuan Ren and
Honghan Wu and
Man Zhu},
editor = {V. Richard Benjamins and
Mathieu d'Aquin and
Andrew Gordon},
title = {Query generation for semantic datasets},
booktitle = {Proceedings of the 7th International Conference on Knowledge Capture,
{K-CAP} 2013, Banff, Canada, June 23-26, 2013},
pages = {113--116},
publisher = {{ACM}},
year = {2013},
url = {https://doi.org/10.1145/2479832.2479859},
doi = {10.1145/2479832.2479859},
timestamp = {Mon, 29 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/kcap/PanRWZ13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wims/LubergGWJT12,
author = {Ago Luberg and
Michael Granitzer and
Honghan Wu and
Priit J{\"{a}}rv and
Tanel Tammet},
editor = {Dumitru Dan Burdescu and
Rajendra Akerkar and
Costin Badica},
title = {Information retrieval and deduplication for tourism recommender sightsplanner},
booktitle = {2nd International Conference on Web Intelligence, Mining and Semantics,
{WIMS} '12, Craiova, Romania, June 6-8, 2012},
pages = {50:1--50:11},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2254129.2254191},
doi = {10.1145/2254129.2254191},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wims/LubergGWJT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wims/WuLT12,
author = {Honghan Wu and
Ago Luberg and
Tanel Tammet},
editor = {Dumitru Dan Burdescu and
Rajendra Akerkar and
Costin Badica},
title = {Ranking domain objects by \emph{wisdom of web pages}},
booktitle = {2nd International Conference on Web Intelligence, Mining and Semantics,
{WIMS} '12, Craiova, Romania, June 6-8, 2012},
pages = {67:1--67:4},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2254129.2254210},
doi = {10.1145/2254129.2254210},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wims/WuLT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/www/ChengGWQ08,
author = {Gong Cheng and
Weiyi Ge and
Honghan Wu and
Yuzhong Qu},
editor = {Christian Bizer and
Tom Heath and
Kingsley Idehen and
Tim Berners{-}Lee},
title = {Searching Semantic Web Objects Based on Class Hierarchies},
booktitle = {Proceedings of the {WWW2008} Workshop on Linked Data on the Web, {LDOW}
2008, Beijing, China, April 22, 2008},
series = {{CEUR} Workshop Proceedings},
volume = {369},
publisher = {CEUR-WS.org},
year = {2008},
url = {https://ceur-ws.org/Vol-369/paper12.pdf},
timestamp = {Fri, 10 Mar 2023 16:22:22 +0100},
biburl = {https://dblp.org/rec/conf/www/ChengGWQ08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/semweb/HuZLCWQ07,
author = {Wei Hu and
Yuanyuan Zhao and
Dan Li and
Gong Cheng and
Honghan Wu and
Yuzhong Qu},
editor = {Pavel Shvaiko and
J{\'{e}}r{\^{o}}me Euzenat and
Fausto Giunchiglia and
Bin He},
title = {Falcon-AO: Results for {OAEI} 2007},
booktitle = {Proceedings of the 2nd International Workshop on Ontology Matching
{(OM-2007)} Collocated with the 6th International Semantic Web Conference
{(ISWC-2007)} and the 2nd Asian Semantic Web Conference (ASWC-2007),
Busan, Korea, November 11, 2007},
series = {{CEUR} Workshop Proceedings},
volume = {304},
publisher = {CEUR-WS.org},
year = {2007},
url = {https://ceur-ws.org/Vol-304/paper14.pdf},
timestamp = {Fri, 10 Mar 2023 16:23:09 +0100},
biburl = {https://dblp.org/rec/conf/semweb/HuZLCWQ07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dc/XuWQ04,
author = {Han Xu and
Honghan Wu and
Yuzhong Qu},
title = {{CANOE:} {A} Course Assembly and Normalization Tool for E-learning},
booktitle = {Metadata Across Languages and Cultures: Proceedings of the 2004 International
Conference on Dublin Core and Metadata Applications, {DC} 2004, Shanghai,
China, October 11-14, 2004},
publisher = {Dublin Core Metadata Initiative},
year = {2004},
url = {http://dcpapers.dublincore.org/pubs/article/view/791},
timestamp = {Wed, 10 Feb 2021 22:01:42 +0100},
biburl = {https://dblp.org/rec/conf/dc/XuWQ04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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