BibTeX records: Anna Zhukova

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@article{DBLP:journals/nar/ShaikhSVMWAAAAB22,
  author       = {Bilal Shaikh and
                  Lucian P. Smith and
                  Dan Vasilescu and
                  Gnaneswara Marupilla and
                  Michael Wilson and
                  Eran Agmon and
                  Henry Agnew and
                  Steven S. Andrews and
                  Azraf Anwar and
                  Moritz E. Beber and
                  Frank T. Bergmann and
                  David Brooks and
                  Lutz Brusch and
                  Laurence Calzone and
                  Kiri Choi and
                  Joshua Cooper and
                  John Detloff and
                  Brian Drawert and
                  Michel Dumontier and
                  G. Bard Ermentrout and
                  James R. Faeder and
                  Andrew P. Freiburger and
                  Fabian Fr{\"{o}}hlich and
                  Akira Funahashi and
                  Alan Garny and
                  John H. Gennari and
                  Padraig Gleeson and
                  Anne Goelzer and
                  Zachary B. Haiman and
                  Jan Hasenauer and
                  Joseph L. Hellerstein and
                  Henning Hermjakob and
                  Stefan Hoops and
                  Jon C. Ison and
                  Diego Jahn and
                  Henry V. Jakubowski and
                  Ryann Jordan and
                  Mat{\'{u}}s Kalas and
                  Matthias K{\"{o}}nig and
                  Wolfram Liebermeister and
                  Rahuman S. Malik{-}Sheriff and
                  Synchon Mandal and
                  Robert A. McDougal and
                  J. Kyle Medley and
                  Pedro Mendes and
                  Robert M{\"{u}}ller and
                  Chris J. Myers and
                  Aur{\'{e}}lien Naldi and
                  Tung V. N. Nguyen and
                  David P. Nickerson and
                  Brett G. Olivier and
                  Drashti Patoliya and
                  Lo{\"{\i}}c Paulev{\'{e}} and
                  Linda R. Petzold and
                  Ankita Priya and
                  Anand K. Rampadarath and
                  Johann M. Rohwer and
                  Ali S. Saglam and
                  Dilawar Singh and
                  Ankur Sinha and
                  Jacky L. Snoep and
                  Hugh Sorby and
                  Ryan K. Spangler and
                  J{\"{o}}rn Starru{\ss} and
                  Payton J. Thomas and
                  David D. van Niekerk and
                  Daniel Weindl and
                  Fengkai Zhang and
                  Anna Zhukova and
                  Arthur P. Goldberg and
                  James C. Schaff and
                  Michael L. Blinov and
                  Herbert M. Sauro and
                  Ion I. Moraru and
                  Jonathan R. Karr},
  title        = {BioSimulators: a central registry of simulation engines and services
                  for recommending specific tools},
  journal      = {Nucleic Acids Res.},
  volume       = {50},
  number       = {{W1}},
  pages        = {108--114},
  year         = {2022},
  url          = {https://doi.org/10.1093/nar/gkac331},
  doi          = {10.1093/NAR/GKAC331},
  timestamp    = {Tue, 24 Oct 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/ShaikhSVMWAAAAB22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/corr/abs-2203-06732,
  author       = {Bilal Shaikh and
                  Lucian P. Smith and
                  Dan Vasilescu and
                  Gnaneswara Marupilla and
                  Michael Wilson and
                  Eran Agmon and
                  Henry Agnew and
                  Steven S. Andrews and
                  Azraf Anwar and
                  Moritz E. Beber and
                  Frank T. Bergmann and
                  David Brooks and
                  Lutz Brusch and
                  Laurence Calzone and
                  Kiri Choi and
                  Joshua Cooper and
                  John Detloff and
                  Brian Drawert and
                  Michel Dumontier and
                  G. Bard Ermentrout and
                  James R. Faeder and
                  Andrew P. Freiburger and
                  Fabian Fr{\"{o}}hlich and
                  Akira Funahashi and
                  Alan Garny and
                  John H. Gennari and
                  Padraig Gleeson and
                  Anne Goelzer and
                  Zachary B. Haiman and
                  Joseph L. Hellerstein and
                  Stefan Hoops and
                  Jon C. Ison and
                  Diego Jahn and
                  Henry V. Jakubowski and
                  Ryann Jordan and
                  Mat{\'{u}}s Kalas and
                  Matthias K{\"{o}}nig and
                  Wolfram Liebermeister and
                  Synchon Mandal and
                  Robert A. McDougal and
                  J. Kyle Medley and
                  Pedro Mendes and
                  Robert M{\"{u}}ller and
                  Chris J. Myers and
                  Aur{\'{e}}lien Naldi and
                  Tung V. N. Nguyen and
                  David P. Nickerson and
                  Brett G. Olivier and
                  Drashti Patoliya and
                  Lo{\"{\i}}c Paulev{\'{e}} and
                  Linda R. Petzold and
                  Ankita Priya and
                  Anand K. Rampadarath and
                  Johann M. Rohwer and
                  Ali S. Saglam and
                  Dilawar Singh and
                  Ankur Sinha and
                  Jacky L. Snoep and
                  Hugh Sorby and
                  Ryan K. Spangler and
                  J{\"{o}}rn Starru{\ss} and
                  Payton J. Thomas and
                  David D. van Niekerk and
                  Daniel Weindl and
                  Fengkai Zhang and
                  Anna Zhukova and
                  Arthur P. Goldberg and
                  Michael L. Blinov and
                  Herbert M. Sauro and
                  Ion I. Moraru and
                  Jonathan R. Karr},
  title        = {BioSimulators: a central registry of simulation engines and services
                  for recommending specific tools},
  journal      = {CoRR},
  volume       = {abs/2203.06732},
  year         = {2022},
  url          = {https://doi.org/10.48550/arXiv.2203.06732},
  doi          = {10.48550/ARXIV.2203.06732},
  eprinttype    = {arXiv},
  eprint       = {2203.06732},
  timestamp    = {Tue, 24 Oct 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-2203-06732.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/information/ZhukovaLL20,
  author       = {Anna Zhukova and
                  Valeriya Lakshina and
                  Liudmila Leonova},
  title        = {Hedonic Pricing on the Fine Art Market},
  journal      = {Inf.},
  volume       = {11},
  number       = {5},
  pages        = {252},
  year         = {2020},
  url          = {https://doi.org/10.3390/info11050252},
  doi          = {10.3390/INFO11050252},
  timestamp    = {Thu, 09 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/information/ZhukovaLL20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/tbe/WaltemathKBCHKL16,
  author       = {Dagmar Waltemath and
                  Jonathan R. Karr and
                  Frank T. Bergmann and
                  Vijayalakshmi Chelliah and
                  Michael Hucka and
                  Marcus Krantz and
                  Wolfram Liebermeister and
                  Pedro Mendes and
                  Chris J. Myers and
                  Pinar Pir and
                  Begum Alaybeyoglu and
                  Naveen K. Aranganathan and
                  Kambiz Baghalian and
                  Arne T. Bittig and
                  Paulo E. Pinto Burke and
                  Matteo Cantarelli and
                  Yin Hoon Chew and
                  Rafael S. Costa and
                  Joseph Cursons and
                  Tobias Czauderna and
                  Arthur P. Goldberg and
                  Harold F. G{\'{o}}mez and
                  Jens Hahn and
                  Tuure Hameri and
                  Daniel F. Hernandez Gardiol and
                  Denis Kazakiewicz and
                  Ilya Kiselev and
                  Vincent Knight{-}Schrijver and
                  Christian Kn{\"{u}}pfer and
                  Matthias K{\"{o}}nig and
                  Daewon Lee and
                  Audald Lloret{-}Villas and
                  Nikita Mandrik and
                  J. Kyle Medley and
                  Bertrand Moreau and
                  Hojjat Naderi{-}Meshkin and
                  Sucheendra K. Palaniappan and
                  Daniel Priego{-}Espinosa and
                  Martin Scharm and
                  Mahesh Sharma and
                  Kieran Smallbone and
                  Natalie J. Stanford and
                  Je{-}Hoon Song and
                  Tom Theile and
                  Milenko Tokic and
                  Namrata Tomar and
                  Vasundra Tour{\'{e}} and
                  Jannis Uhlendorf and
                  Thawfeek M. Varusai and
                  Leandro H. Watanabe and
                  Florian Wendland and
                  Markus Wolfien and
                  James T. Yurkovich and
                  Yan Zhu and
                  Argyris Zardilis and
                  Anna Zhukova and
                  Falk Schreiber},
  title        = {Toward Community Standards and Software for Whole-Cell Modeling},
  journal      = {{IEEE} Trans. Biomed. Eng.},
  volume       = {63},
  number       = {10},
  pages        = {2007--2014},
  year         = {2016},
  url          = {https://doi.org/10.1109/TBME.2016.2560762},
  doi          = {10.1109/TBME.2016.2560762},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/tbe/WaltemathKBCHKL16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bmcsb/ZhukovaS15,
  author       = {Anna Zhukova and
                  David James Sherman},
  title        = {Mimoza: web-based semantic zooming and navigation in metabolic networks},
  journal      = {{BMC} Syst. Biol.},
  volume       = {9},
  pages        = {10},
  year         = {2015},
  url          = {https://doi.org/10.1186/s12918-015-0151-5},
  doi          = {10.1186/S12918-015-0151-5},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/ZhukovaS15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jbcb/LoiraZS15,
  author       = {Nicol{\'{a}}s Loira and
                  Anna Zhukova and
                  David James Sherman},
  title        = {Pantograph: {A} template-based method for genome-scale metabolic model
                  reconstruction},
  journal      = {J. Bioinform. Comput. Biol.},
  volume       = {13},
  number       = {2},
  pages        = {1550006:1--1550006:19},
  year         = {2015},
  url          = {https://doi.org/10.1142/S0219720015500067},
  doi          = {10.1142/S0219720015500067},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jbcb/LoiraZS15.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@phdthesis{DBLP:phd/hal/Zhukova14,
  author       = {Anna Zhukova},
  title        = {Knowledge-based scaling for biological models. (G{\'{e}}n{\'{e}}ralisation
                  de mod{\`{e}}les m{\'{e}}taboliques par connaissances)},
  school       = {University of Bordeaux, France},
  year         = {2014},
  url          = {https://tel.archives-ouvertes.fr/tel-01123711},
  timestamp    = {Tue, 21 Jul 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/phd/hal/Zhukova14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jbcb/ZhukovaS14,
  author       = {Anna Zhukova and
                  David James Sherman},
  title        = {Knowledge-based generalization of metabolic networks: {A} practical
                  study},
  journal      = {J. Bioinform. Comput. Biol.},
  volume       = {12},
  number       = {2},
  year         = {2014},
  url          = {https://doi.org/10.1142/S0219720014410017},
  doi          = {10.1142/S0219720014410017},
  timestamp    = {Thu, 04 Jun 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/jbcb/ZhukovaS14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/jcb/ZhukovaS14,
  author       = {Anna Zhukova and
                  David James Sherman},
  title        = {Knowledge-based Generalization of Metabolic Models},
  journal      = {J. Comput. Biol.},
  volume       = {21},
  number       = {7},
  pages        = {534--547},
  year         = {2014},
  url          = {https://doi.org/10.1089/cmb.2013.0143},
  doi          = {10.1089/CMB.2013.0143},
  timestamp    = {Thu, 12 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/jcb/ZhukovaS14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}

@article{DBLP:journals/bioinformatics/MaloneHAKZKZBP10,
  author       = {James Malone and
                  Ele Holloway and
                  Tomasz Adamusiak and
                  Misha Kapushesky and
                  Jie Zheng and
                  Nikolay Kolesnikov and
                  Anna Zhukova and
                  Alvis Brazma and
                  Helen E. Parkinson},
  title        = {Modeling sample variables with an Experimental Factor Ontology},
  journal      = {Bioinform.},
  volume       = {26},
  number       = {8},
  pages        = {1112--1118},
  year         = {2010},
  url          = {https://doi.org/10.1093/bioinformatics/btq099},
  doi          = {10.1093/BIOINFORMATICS/BTQ099},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/MaloneHAKZKZBP10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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