Manuela Helmer-Citterich Coauthor index pubzone.org

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DBLP keys2016
j35Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLFabrizio Ferrè, Alessio Colantoni, Manuela Helmer-Citterich: Revealing protein-lncRNA interaction. Briefings in Bioinformatics 17(1): 106-116 (2016)
j34Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLJon C. Ison, Kristoffer Rapacki, Hervé Ménager, Matús Kalas, Emil Rydza, Piotr Chmura, Christian Anthon, Niall Beard, Karel Berka, Dan M. Bolser, Tim Booth, Anthony Bretaudeau, Jan Brezovsky, Rita Casadio, Gianni Cesareni, Frederik Coppens, Michael Cornell, Gianmauro Cuccuru, Kristian Davidsen, Gianluca Della Vedova, Tunca Dogan, Olivia Doppelt-Azeroual, Laura Emery, Elisabeth Gasteiger, Thomas Gatter, Tatyana Goldberg, Marie Grosjean, Björn A. Grüning, Manuela Helmer-Citterich, Hans Ienasescu, Vassilios Ioannidis, Martin Closter Jespersen, Rafael C. Jimenez, Nick S. Juty, Peter Juvan, Maximilian Koch, Camille Laibe, Jing-Woei Li, Luana Licata, Fabien Mareuil, Ivan Micetic, Rune Møllegaard Friborg, Sébastien Moretti, Chris Morris, Steffen Möller, Aleksandra Nenadic, Hedi Peterson, Giuseppe Profiti, Peter M. Rice, Paolo Romano, Paola Roncaglia, Rabie Saidi, Andrea Schafferhans, Veit Schwämmle, Callum Smith, Maria Maddalena Sperotto, Heinz Stockinger, Radka Svobodová Vareková, Silvio C. E. Tosatto, Victor de la Torre, Paolo Uva, Allegra Via, Guy Yachdav, Federico Zambelli, Gert Vriend, Burkhard Rost, Helen E. Parkinson, Peter Løngreen, Søren Brunak: Tools and data services registry: a community effort to document bioinformatics resources. Nucleic Acids Research 44(Database-Issue): 38-47 (2016)
2015
j33Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAngelo M. Facchiano, Claudia Angelini, Roberta Bosotti, Alessandro Guffanti, Anna Marabotti, Roberto Marangoni, Stefano Pascarella, Paolo Romano, Andreas Zanzoni, Manuela Helmer-Citterich: Preface: BITS2014, the annual meeting of the Italian Society of Bioinformatics. BMC Bioinformatics 16(S-9): S1 (2015)
j32Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLEugenio Mattei, Marco Pietrosanto, Fabrizio Ferrè, Manuela Helmer-Citterich: Web-Beagle: a web server for the alignment of RNA secondary structures. Nucleic Acids Research 43(Webserver-Issue): W493-W497 (2015)
2013
j31Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLValerio Bianchi, Alessio Colantoni, Alberto Calderone, Gabriele Ausiello, Fabrizio Ferrè, Manuela Helmer-Citterich: DBATE: database of alternative transcripts expression. Database 2013 (2013)
j30Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLCarmela Gissi, Paolo Romano, Alfredo Ferro, Rosalba Giugno, Alfredo Pulvirenti, Angelo M. Facchiano, Manuela Helmer-Citterich: Bioinformatics in Italy: BITS 2012, the ninth annual meeting of the Italian Society of Bioinformatics. BMC Bioinformatics 14(S-7): S1 (2013)
j29Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLLuca Parca, Fabrizio Ferrè, Gabriele Ausiello, Manuela Helmer-Citterich: Nucleos: a web server for the identification of nucleotide-binding sites in protein structures. Nucleic Acids Research 41(Webserver-Issue): 281-285 (2013)
j28Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLValerio Bianchi, Iolanda Mangone, Fabrizio Ferrè, Manuela Helmer-Citterich, Gabriele Ausiello: webPDBinder: a server for the identification of ligand binding sites on protein structures. Nucleic Acids Research 41(Webserver-Issue): 308-313 (2013)
2012
j27Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLPaolo Romano, Manuela Helmer-Citterich: Bioinformatics in Italy: BITS2011, the Eighth Annual Meeting of the Italian Society of Bioinformatics. BMC Bioinformatics 13(S-4): I1 (2012)
j26Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLValerio Bianchi, Pier Federico Gherardini, Manuela Helmer-Citterich, Gabriele Ausiello: Identification of binding pockets in protein structures using a knowledge-based potential derived from local structural similarities. BMC Bioinformatics 13(S-4): S17 (2012)
j25Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLFabio Fioravanti, Manuela Helmer-Citterich, Enrico Nardelli: Modeling gene regulatory network motifs using statecharts. BMC Bioinformatics 13(S-4): S20 (2012)
2011
j24Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAndreas Zanzoni, Daniel Carbajo, Francesca Diella, Pier Federico Gherardini, Anna Tramontano, Manuela Helmer-Citterich, Allegra Via: Phospho3D 2.0: an enhanced database of three-dimensional structures of phosphorylation sites. Nucleic Acids Research 39(Database-Issue): 268-271 (2011)
j23Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLLuca Parca, Iolanda Mangone, Pier Federico Gherardini, Gabriele Ausiello, Manuela Helmer-Citterich: Phosfinder: a web server for the identification of phosphate-binding sites on protein structures. Nucleic Acids Research 39(Web-Server-Issue): 278-282 (2011)
2010
j22Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLCathryn M. Gould, Francesca Diella, Allegra Via, Pål Puntervoll, Christine Gemünd, Sophie Chabanis-Davidson, Sushama Michael, Ahmed Sayadi, Jan Christian Bryne, Claudia Chica, Markus Seiler, Norman E. Davey, Niall J. Haslam, Robert J. Weatheritt, Aidan Budd, Tim Hughes, Jakub Pas, Leszek Rychlewski, Gilles Travé, Rein Aasland, Manuela Helmer-Citterich, Rune Linding, Toby J. Gibson: ELM: the status of the 2010 eukaryotic linear motif resource. Nucleic Acids Research 38(Database-Issue): 167-180 (2010)
2009
j21Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGabriele Ausiello, Pier Federico Gherardini, Elena Gatti, Ottaviano Incani, Manuela Helmer-Citterich: Structural motifs recurring in different folds recognize the same ligand fragments. BMC Bioinformatics 10 (2009)
j20Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAllegra Via, Cathryn M. Gould, Christine Gemünd, Toby J. Gibson, Manuela Helmer-Citterich: A structure filter for the Eukaryotic Linear Motif Resource. BMC Bioinformatics 10: 351 (2009)
2008
j19Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGabriele Ausiello, Pier Federico Gherardini, Paolo Marcatili, Anna Tramontano, Allegra Via, Manuela Helmer-Citterich: FunClust: a web server for the identification of structural motifs in a set of non-homologous protein structures. BMC Bioinformatics 9(S-2) (2008)
j18Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGraziano Pesole, Manuela Helmer-Citterich: Bioinformatics in Italy: BITS2007, the fourth annual meeting of the Italian Society of Bioinformatics. BMC Bioinformatics 9(S-2) (2008)
2007
j17Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGabriele Ausiello, Daniele Peluso, Allegra Via, Manuela Helmer-Citterich: Local comparison of protein structures highlights cases of convergent evolution in analogous functional sites. BMC Bioinformatics 8(S-1) (2007)
j16Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRita Casadio, Manuela Helmer-Citterich, Graziano Pesole: Bioinformatics in Italy: BITS2006, the third annual meeting of the Italian Society of Bioinformatics. BMC Bioinformatics 8(S-1) (2007)
j15Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAllegra Via, Pier Federico Gherardini, Enrico Ferraro, Gabriele Ausiello, Gianpaolo Scalia Tomba, Manuela Helmer-Citterich: False occurrences of functional motifs in protein sequences highlight evolutionary constraints. BMC Bioinformatics 8 (2007)
j14Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAndreas Zanzoni, Gabriele Ausiello, Allegra Via, Pier Federico Gherardini, Manuela Helmer-Citterich: Phospho3D: a database of three-dimensional structures of protein phosphorylation sites. Nucleic Acids Research 35(Database-Issue): 229-231 (2007)
j13Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAllegra Via, Daniele Peluso, Pier Federico Gherardini, Emanuele de Rinaldis, Teresa Colombo, Gabriele Ausiello, Manuela Helmer-Citterich: 3dLOGO: a web server for the identification, analysis and use of conserved protein substructures. Nucleic Acids Research 35(Web-Server-Issue): 416-419 (2007)
j12Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLEnrico Ferraro, Daniele Peluso, Allegra Via, Gabriele Ausiello, Manuela Helmer-Citterich: SH3-Hunter: discovery of SH3 domain interaction sites in proteins. Nucleic Acids Research 35(Web-Server-Issue): 451-454 (2007)
2006
j11Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLEnrico Ferraro, Allegra Via, Gabriele Ausiello, Manuela Helmer-Citterich: A novel structure-based encoding for machine-learning applied to the inference of SH3 domain specificity. Bioinformatics 22(19): 2333-2339 (2006)
2005
j10Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAllegra Via, Andreas Zanzoni, Manuela Helmer-Citterich: Seq2Struct: a resource for establishing sequence-structure links. Bioinformatics 21(4): 551-553 (2005)
j9Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGabriele Ausiello, Allegra Via, Manuela Helmer-Citterich: Query3d: a new method for high-throughput analysis of functional residues in protein structures. BMC Bioinformatics 6(S-4) (2005)
j8Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLEnrico Ferraro, Allegra Via, Gabriele Ausiello, Manuela Helmer-Citterich: A neural strategy for the inference of SH3 domain-peptide interaction specificity. BMC Bioinformatics 6(S-4) (2005)
j7Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLFabrizio Ferrè, Gabriele Ausiello, Andreas Zanzoni, Manuela Helmer-Citterich: Functional annotation by identification of local surface similarities: a novel tool for structural genomics. BMC Bioinformatics 6: 194 (2005)
j6Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLManuela Helmer-Citterich, Rita Casadio, Alessandro Guffanti, Giancarlo Mauri, Luciano Milanesi, Graziano Pesole, Giorgio Valle, Cecilia Saccone: Overview of BITS2005, the Second Annual Meeting of the Italian Bioinformatics Society. BMC Bioinformatics 6(S-4) (2005)
j5Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGabriele Ausiello, Andreas Zanzoni, Daniele Peluso, Allegra Via, Manuela Helmer-Citterich: pdbFun: mass selection and fast comparison of annotated PDB residues. Nucleic Acids Research 33(Web-Server-Issue): 133-137 (2005)
2004
j4Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAllegra Via, Manuela Helmer-Citterich: A structural study for the optimisation of functional motifs encoded in protein sequences. BMC Bioinformatics 5: 50 (2004)
j3Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLFabrizio Ferrè, Gabriele Ausiello, Andreas Zanzoni, Manuela Helmer-Citterich: SURFACE: a database of protein surface regions for functional annotation. Nucleic Acids Research 32(Database-Issue): 240-244 (2004)
2003
j2Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLPål Puntervoll, Rune Linding, Christine Gemünd, Sophie Chabanis-Davidson, Morten Mattingsdal, Scott Cameron, David M. A. Martin, Gabriele Ausiello, Barbara Brannetti, Anna Costantini, Fabrizio Ferrè, Vincenza Maselli, Allegra Via, Gianni Cesareni, Francesca Diella, Giulio Superti-Furga, Lucjan Stanislaw Wyrwicz, Chenna Ramu, Caroline McGuigan, Rambabu Gudavalli, Ivica Letunic, Peer Bork, Leszek Rychlewski, Bernhard Küster, Manuela Helmer-Citterich, William N. Hunter, Rein Aasland, Toby J. Gibson: ELM server: a new resource for investigating short functional sites in modular eukaryotic proteins. Nucleic Acids Research 31(13): 3625-3630 (2003)
j1Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLBarbara Brannetti, Manuela Helmer-Citterich: iSPOT: a web tool to infer the interaction specificity of families of protein modules. Nucleic Acids Research 31(13): 3709-3711 (2003)

Coauthor Index

1Rein Aasland[j22] [j2]
2Claudia Angelini[j33]
3Christian Anthon[j34]
4Gabriele Ausiello[j31] [j29] [j28] [j26] [j23] [j21] [j19] [j17] [j15] [j14] [j13] [j12] [j11] [j9] [j8] [j7] [j5] [j3] [j2]
5Niall Beard[j34]
6Karel Berka[j34]
7Valerio Bianchi[j31] [j28] [j26]
8Dan M. Bolser[j34]
9Tim Booth[j34]
10Peer Bork[j2]
11Roberta Bosotti[j33]
12Barbara Brannetti[j2] [j1]
13Anthony Bretaudeau[j34]
14Jan Brezovsky[j34]
15Søren Brunak[j34]
16Jan Christian Bryne[j22]
17Aidan Budd[j22]
18Alberto Calderone[j31]
19Scott Cameron[j2]
20Daniel Carbajo[j24]
21Rita Casadio[j34] [j16] [j6]
22Gianni Cesareni[j34] [j2]
23Sophie Chabanis-Davidson[j22] [j2]
24Claudia Chica[j22]
25Piotr Chmura[j34]
26Alessio Colantoni[j35] [j31]
27Teresa Colombo[j13]
28Frederik Coppens[j34]
29Michael Cornell[j34]
30Anna Costantini[j2]
31Gianmauro Cuccuru[j34]
32Norman E. Davey[j22]
33Kristian Davidsen[j34]
34Francesca Diella[j24] [j22] [j2]
35Tunca Dogan[j34]
36Olivia Doppelt-Azeroual[j34]
37Laura Emery[j34]
38Angelo M. Facchiano[j33] [j30]
39Enrico Ferraro[j15] [j12] [j11] [j8]
40Fabrizio Ferrè[j35] [j32] [j31] [j29] [j28] [j7] [j3] [j2]
41Alfredo Ferro[j30]
42Fabio Fioravanti[j25]
43Rune Møllegaard Friborg[j34]
44Elisabeth Gasteiger[j34]
45Thomas Gatter[j34]
46Elena Gatti[j21]
47Christine Gemünd[j22] [j20] [j2]
48Pier Federico Gherardini[j26] [j24] [j23] [j21] [j19] [j15] [j14] [j13]
49Toby J. Gibson[j22] [j20] [j2]
50Carmela Gissi[j30]
51Rosalba Giugno[j30]
52Tatyana Goldberg[j34]
53Cathryn M. Gould[j22] [j20]
54Marie Grosjean[j34]
55Björn A. Grüning[j34]
56Rambabu Gudavalli[j2]
57Alessandro Guffanti[j33] [j6]
58Niall J. Haslam[j22]
59Tim Hughes[j22]
60William N. Hunter[j2]
61Hans Ienasescu[j34]
62Ottaviano Incani[j21]
63Vassilios Ioannidis[j34]
64Jon C. Ison[j34]
65Martin Closter Jespersen[j34]
66Rafael C. Jimenez[j34]
67Nick S. Juty[j34]
68Peter Juvan[j34]
69Matús Kalas[j34]
70Maximilian Koch[j34]
71Bernhard Küster[j2]
72Camille Laibe[j34]
73Ivica Letunic[j2]
74Jing-Woei Li[j34]
75Luana Licata[j34]
76Rune Linding[j22] [j2]
77Peter Løngreen[j34]
78Iolanda Mangone[j28] [j23]
79Anna Marabotti[j33]
80Roberto Marangoni[j33]
81Paolo Marcatili[j19]
82Fabien Mareuil[j34]
83David M. A. Martin[j2]
84Vincenza Maselli[j2]
85Eugenio Mattei[j32]
86Morten Mattingsdal[j2]
87Giancarlo Mauri[j6]
88Caroline McGuigan[j2]
89Hervé Ménager[j34]
90Ivan Micetic[j34]
91Sushama Michael[j22]
92Luciano Milanesi[j6]
93Steffen Möller[j34]
94Sébastien Moretti[j34]
95Chris Morris[j34]
96Enrico Nardelli[j25]
97Aleksandra Nenadic[j34]
98Luca Parca[j29] [j23]
99Helen E. Parkinson[j34]
100Jakub Pas[j22]
101Stefano Pascarella[j33]
102Daniele Peluso[j17] [j13] [j12] [j5]
103Graziano Pesole[j18] [j16] [j6]
104Hedi Peterson[j34]
105Marco Pietrosanto[j32]
106Giuseppe Profiti[j34]
107Alfredo Pulvirenti[j30]
108Pål Puntervoll[j22] [j2]
109Chenna Ramu[j2]
110Kristoffer Rapacki[j34]
111Peter M. Rice[j34]
112Emanuele de Rinaldis[j13]
113Paolo Romano[j34] [j33] [j30] [j27]
114Paola Roncaglia[j34]
115Burkhard Rost[j34]
116Leszek Rychlewski[j22] [j2]
117Emil Rydza[j34]
118Cecilia Saccone[j6]
119Rabie Saidi[j34]
120Ahmed Sayadi[j22]
121Andrea Schafferhans[j34]
122Veit Schwämmle[j34]
123Markus Seiler[j22]
124Callum Smith[j34]
125Maria Sperotto
Maria Maddalena Sperotto
[j34]
126Heinz Stockinger[j34]
127Giulio Superti-Furga[j2]
128Gianpaolo Scalia Tomba[j15]
129Victor de la Torre[j34]
130Silvio C. E. Tosatto[j34]
131Anna Tramontano[j24] [j19]
132Gilles Travé[j22]
133Paolo Uva[j34]
134Giorgio Valle[j6]
135Radka Svobodová Vareková[j34]
136Gianluca Della Vedova[j34]
137Allegra Via[j34] [j24] [j22] [j20] [j19] [j17] [j15] [j14] [j13] [j12] [j11] [j10] [j9] [j8] [j5] [j4] [j2]
138Gert Vriend[j34]
139Robert J. Weatheritt[j22]
140Lucjan Stanislaw Wyrwicz[j2]
141Guy Yachdav[j34]
142Federico Zambelli[j34]
143Andreas Zanzoni[j33] [j24] [j14] [j10] [j7] [j5] [j3]

 

Last update 2016-09-21 23:42 CEST by the DBLP TeamThis material is Open Data Data released under the ODC-BY 1.0 license — See also our legal information page