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j64Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLBachir Balech, Saverio Vicario, Giacinto Donvito, Alfonso Monaco, Pasquale Notarangelo, Graziano Pesole: MSA-PAD: DNA multiple sequence alignment framework based on PFAM accessed domain information. Bioinformatics 31(15): 2571-2573 (2015)
j63Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLBruno Fosso, Monica Santamaria, Marinella Marzano, Daniel Alonso-Alemany, Gabriel Valiente, Giacinto Donvito, Alfonso Monaco, Pasquale Notarangelo, Graziano Pesole: BioMaS: a modular pipeline for Bioinformatic analysis of Metagenomic AmpliconS. BMC Bioinformatics 16: 203:1-203:11 (2015)
2014
j62Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLClaudia Calabrese, Domenico Simone, Maria Angela Diroma, Mariangela Santorsola, Cristiano Guttà, Giuseppe Gasparre, Ernesto Picardi, Graziano Pesole, Marcella Attimonelli: MToolBox: a highly automated pipeline for heteroplasmy annotation and prioritization analysis of human mitochondrial variants in high-throughput sequencing. Bioinformatics 30(21): 3115-3117 (2014)
j61Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLVitoantonio Bevilacqua, Nicola Pietroleonardo, Ely Ignazio Giannino, Fabio Stroppa, Domenico Simone, Graziano Pesole, Ernesto Picardi: EasyCluster2: an improved tool for clustering and assembling long transcriptome reads. BMC Bioinformatics 15(S-15): S7 (2014)
c10Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMattia D'Antonio, Paolo D'Onorio De Meo, Tiziana Castrignanò, Giovanni Erbacci, Matteo Pallocca, Graziano Pesole: ODESSA: A high performance analysis pipeline for Ultra Deep targeted Exome Sequencing data. HPCS 2014: 608-615
2013
j60Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLFederico Zambelli, Graziano Pesole, Giulio Pavesi: Motif discovery and transcription factor binding sites before and after the next-generation sequencing era. Briefings in Bioinformatics 14(2): 225-237 (2013)
j59Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLErnesto Picardi, Graziano Pesole: REDItools: high-throughput RNA editing detection made easy. Bioinformatics 29(14): 1813-1814 (2013)
j58Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLIlenia Boria, Lara Boatti, Graziano Pesole, Flavio Mignone: NGS-Trex: Next Generation Sequencing Transcriptome profile explorer. BMC Bioinformatics 14(S-7): S10 (2013)
j57Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMattia D'Antonio, Paolo D'Onorio De Meo, Daniele Paoletti, Berardino Elmi, Matteo Pallocca, Nico Sanna, Ernesto Picardi, Graziano Pesole, Tiziana Castrignanò: WEP: a high-performance analysis pipeline for whole-exome data. BMC Bioinformatics 14(S-7): S11 (2013)
j56Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMatteo Giulietti, Francesco Piva, Mattia D'Antonio, Paolo D'Onorio De Meo, Daniele Paoletti, Tiziana Castrignanò, Anna Maria D'Erchia, Ernesto Picardi, Federico Zambelli, Giovanni Principato, Giulio Pavesi, Graziano Pesole: SpliceAid-F: a database of human splicing factors and their RNA-binding sites. Nucleic Acids Research 41(Database-Issue): 125-131 (2013)
j55Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLFederico Zambelli, Graziano Pesole, Giulio Pavesi: PscanChIP: finding over-represented transcription factor-binding site motifs and their correlations in sequences from ChIP-Seq experiments. Nucleic Acids Research 41(Webserver-Issue): 535-543 (2013)
c9Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLVitoantonio Bevilacqua, Nicola Pietroleonardo, Ely Ignazio Giannino, Fabio Stroppa, Graziano Pesole, Ernesto Picardi: Clustering and Assembling Large Transcriptome Datasets by EasyCluster2. ICIC (3) 2013: 231-236
2012
j54Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGabriel Valiente, Graziano Pesole: Editorial. Briefings in Bioinformatics 13(6): 645 (2012)
j53Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMonica Santamaria, Bruno Fosso, Arianna Consiglio, Giorgio De Caro, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Marinella Marzano, Daniel Alonso-Alemany, Gabriel Valiente, Graziano Pesole: Reference databases for taxonomic assignment in metagenomics. Briefings in Bioinformatics 13(6): 682-695 (2012)
j52Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLYuri Pirola, Raffaella Rizzi, Ernesto Picardi, Graziano Pesole, Gianluca Della Vedova, Paola Bonizzoni: PIntron: a fast method for detecting the gene structure due to alternative splicing via maximal pairings of a pattern and a text. BMC Bioinformatics 13(S-5): S2 (2012)
j51Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLPaolo D'Onorio De Meo, Mattia D'Antonio, Francesca Griggio, Renato Lupi, Massimiliano Borsani, Giulio Pavesi, Tiziana Castrignanò, Graziano Pesole, Carmela Gissi: MitoZoa 2.0: a database resource and search tools for comparative and evolutionary analyses of mitochondrial genomes in Metazoa. Nucleic Acids Research 40(Database-Issue): 1168-1172 (2012)
j50Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLFederico Zambelli, Gian Marco Prazzoli, Graziano Pesole, Giulio Pavesi: Cscan: finding common regulators of a set of genes by using a collection of genome-wide ChIP-seq datasets. Nucleic Acids Research 40(Web-Server-Issue): 510-515 (2012)
2011
j49Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLErnesto Picardi, Mattia D'Antonio, Danilo Carrabino, Tiziana Castrignanò, Graziano Pesole: ExpEdit: a webserver to explore human RNA editing in RNA-Seq experiments. Bioinformatics 27(9): 1311-1312 (2011)
j48Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLPier Luigi Martelli, Mattia D'Antonio, Paola Bonizzoni, Tiziana Castrignanò, Anna Maria D'Erchia, Paolo D'Onorio De Meo, Piero Fariselli, Michele Finelli, Flavio Licciulli, Marina Mangiulli, Flavio Mignone, Giulio Pavesi, Ernesto Picardi, Raffaella Rizzi, Ivan Rossi, Alessio Valletti, Andrea Zauli, Federico Zambelli, Rita Casadio, Graziano Pesole: ASPicDB: a database of annotated transcript and protein variants generated by alternative splicing. Nucleic Acids Research 39(Database-Issue): 80-85 (2011)
2010
j47Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLDavid Stephen Horner, Giulio Pavesi, Tiziana Castrignanò, Paolo D'Onorio De Meo, Sabino Liuni, Michael Sammeth, Ernesto Picardi, Graziano Pesole: Bioinformatics approaches for genomics and post genomics applications of next-generation sequencing. Briefings in Bioinformatics 11(2): 181-197 (2010)
j46Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGiorgio Grillo, Antonio Turi, Flavio Licciulli, Flavio Mignone, Sabino Liuni, Sandro Banfi, Vincenzo Alessandro Gennarino, David Stephen Horner, Giulio Pavesi, Ernesto Picardi, Graziano Pesole: UTRdb and UTRsite (RELEASE 2010): a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs. Nucleic Acids Research 38(Database-Issue): 75-80 (2010)
c8Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLVitoantonio Bevilacqua, Ernesto Picardi, Graziano Pesole, Daniele Ranieri, Vincenzo Stola, Vito Renó: New Tools for Expression Alternative Splicing Validation. ICIC (3) 2010: 222-231
2009
j45Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLTeresa Maria Creanza, David Stephen Horner, Annarita D'Addabbo, Rosalia Maglietta, Flavio Mignone, Nicola Ancona, Graziano Pesole: Statistical assessment of discriminative features for protein-coding and non coding cross-species conserved sequence elements. BMC Bioinformatics 10(S-6) (2009)
j44Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLErnesto Picardi, Flavio Mignone, Graziano Pesole: EasyCluster: a fast and efficient gene-oriented clustering tool for large-scale transcriptome data. BMC Bioinformatics 10(S-6) (2009)
j43Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMatteo Re, Graziano Pesole, David Stephen Horner: Accurate discrimination of conserved coding and non-coding regions through multiple indicators of evolutionary dynamics. BMC Bioinformatics 10: 282 (2009)
j42Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLPaola Bonizzoni, Giancarlo Mauri, Graziano Pesole, Ernesto Picardi, Yuri Pirola, Raffaella Rizzi: Detecting Alternative Gene Structures from Spliced ESTs: A Computational Approach. Journal of Computational Biology 16(1): 43-66 (2009)
j41Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLFederico Zambelli, Graziano Pesole, Giulio Pavesi: Pscan: finding over-represented transcription factor binding site motifs in sequences from co-regulated or co-expressed genes. Nucleic Acids Research 37(Web-Server-Issue): 247-252 (2009)
2008
j40Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLDavid Stephen Horner, Walter Pirovano, Graziano Pesole: Correlated substitution analysis and the prediction of amino acid structural contacts. Briefings in Bioinformatics 9(1): 46-56 (2008)
j39Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLTiziana Castrignanò, Mattia D'Antonio, Anna Anselmo, Danilo Carrabino, A. D'Onorio De Meo, Anna Maria D'Erchia, Flavio Licciulli, Marina Mangiulli, Flavio Mignone, Giulio Pavesi, Ernesto Picardi, A. Riva, Raffaella Rizzi, Paola Bonizzoni, Graziano Pesole: ASPicDB: A database resource for alternative splicing analysis. Bioinformatics 24(10): 1300-1304 (2008)
j38Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGraziano Pesole, Manuela Helmer-Citterich: Bioinformatics in Italy: BITS2007, the fourth annual meeting of the Italian Society of Bioinformatics. BMC Bioinformatics 9(S-2) (2008)
c7Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLTyler S. Alioto, Roderic Guigó, Ernesto Picardi, Graziano Pesole: GenePC and ASPIC Integrate Gene Predictions with Expressed Sequence Alignments To Predict Alternative Transcripts. APBC 2008: 363-372
c6Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLPaolo D'Onorio De Meo, Danilo Carrabino, Mattia D'Antonio, Annarita D'Addabbo, Sabino Liuni, Flavio Mignone, Graziano Pesole, Nicola Ancona: HT-RLS: High-Throughput Web Tool for Analysis of DNA Microarray Data Using RLS classifiers. CCGRID 2008: 747-752
2007
j37Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRosalia Maglietta, Annarita D'Addabbo, Ada Piepoli, Francesco Perri, Sabino Liuni, Graziano Pesole, Nicola Ancona: Selection of relevant genes in cancer diagnosis based on their prediction accuracy. Artificial Intelligence in Medicine 40(1): 29-44 (2007)
j36Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRosalia Maglietta, Ada Piepoli, Domenico Catalano, Piepoli Licciulli, Massimo Carella, Sabino Liuni, Graziano Pesole, Francesco Perri, Nicola Ancona: Statistical assessment of functional categories of genes deregulated in pathological conditions by using microarray data. Bioinformatics 23(16): 2063-2072 (2007)
j35Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRita Casadio, Manuela Helmer-Citterich, Graziano Pesole: Bioinformatics in Italy: BITS2006, the third annual meeting of the Italian Society of Bioinformatics. BMC Bioinformatics 8(S-1) (2007)
j34Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGiulio Pavesi, Federico Zambelli, Graziano Pesole: WeederH: an algorithm for finding conserved regulatory motifs and regions in homologous sequences. BMC Bioinformatics 8 (2007)
j33Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLElisabetta Sbisà, Domenico Catalano, Giorgio Grillo, Flavio Licciulli, Antonio Turi, Sabino Liuni, Graziano Pesole, Anna De Grassi, Mariano Francesco Caratozzolo, Anna Maria D'Erchia, Beatriz Navarro, Apollonia Tullo, Cecilia Saccone, Andreas Gisel: p53FamTaG: a database resource of human p53, p63 and p73 direct target genes combining in silico prediction and microarray data. BMC Bioinformatics 8(S-1) (2007)
j32Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLPaolo D'Onorio De Meo, Danilo Carrabino, Nico Sanna, Tiziana Castrignanò, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Matteo Re, Flavio Mignone, Graziano Pesole: A high performance grid-web service framework for the identification of 'conserved sequence tags'. Future Generation Comp. Syst. 23(3): 371-381 (2007)
2006
j31Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLTiziana Castrignanò, Paolo D'Onorio De Meo, Giorgio Grillo, Sabino Liuni, Flavio Mignone, Ivano Giuseppe Talamo, Graziano Pesole: GenoMiner: a tool for genome-wide search of coding and non-coding conserved sequence tags. Bioinformatics 22(4): 497-499 (2006)
j30Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLNicola Ancona, Rosalia Maglietta, Ada Piepoli, Annarita D'Addabbo, R. Cotugno, M. Savino, Sabino Liuni, Massimo Carella, Graziano Pesole, Francesco Perri: On the statistical assessment of classifiers using DNA microarray data. BMC Bioinformatics 7: 387 (2006)
j29Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLTiziana Castrignanò, Raffaella Rizzi, Ivano Giuseppe Talamo, Paolo D'Onorio De Meo, Anna Anselmo, Paola Bonizzoni, Graziano Pesole: ASPIC: a web resource for alternative splicing prediction and transcript isoforms characterization. Nucleic Acids Research 34(Web-Server-Issue): 440-443 (2006)
j28Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGiulio Pavesi, Paolo Mereghetti, Federico Zambelli, Marco Stefani, Giancarlo Mauri, Graziano Pesole: MoD Tools: regulatory motif discovery in nucleotide sequences from co-regulated or homologous genes. Nucleic Acids Research 34(Web-Server-Issue): 566-570 (2006)
c5Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLRosalia Maglietta, Annarita D'Addabbo, Ada Piepoli, Francesco Perri, Sabino Liuni, Graziano Pesole, Nicola Ancona: Classification error as a measure of gene relevance in cancer diagnosis. IJCNN 2006: 3553-3560
2005
j27Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLNicola Ancona, Rosalia Maglietta, Annarita D'Addabbo, Sabino Liuni, Graziano Pesole: Regularized Least Squares Cancer Classifiers from DNA microarray data. BMC Bioinformatics 6(S-4) (2005)
j26Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLPaola Bonizzoni, Raffaella Rizzi, Graziano Pesole: ASPIC: a novel method to predict the exon-intron structure of a gene that is optimally compatible to a set of transcript sequences. BMC Bioinformatics 6: 244 (2005)
j25Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLManuela Helmer-Citterich, Rita Casadio, Alessandro Guffanti, Giancarlo Mauri, Luciano Milanesi, Graziano Pesole, Giorgio Valle, Cecilia Saccone: Overview of BITS2005, the Second Annual Meeting of the Italian Bioinformatics Society. BMC Bioinformatics 6(S-4) (2005)
j24Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLFlavio Mignone, Giorgio Grillo, Flavio Licciulli, Michele Iacono, Sabino Liuni, Paul J. Kersey, Jorge Duarte, Cecilia Saccone, Graziano Pesole: UTRdb and UTRsite: a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs. Nucleic Acids Research 33(Database-Issue): 141-146 (2005)
j23Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAngelo Boccia, Mauro Petrillo, Diego di Bernardo, Alessandro Guffanti, Flavio Mignone, Stefano Confalonieri, Lucilla Luzi, Graziano Pesole, Giovanni Paolella, Andrea Ballabio, Sandro Banfi: DG-CST (Disease Gene Conserved Sequence Tags), a database of human-mouse conserved elements associated to disease genes. Nucleic Acids Research 33(Database-Issue): 505-510 (2005)
c4no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLNicola Ancona, Annarita D'Addabbo, Sabino Liuni, Graziano Pesole, Rosalia Maglietta: SVM and RLS Models for Cancer Classification. Computational Intelligence 2005: 250-255
2004
j22Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGiulio Pavesi, Giancarlo Mauri, Graziano Pesole: In silico representation and discovery of transcription factor binding sites. Briefings in Bioinformatics 5(3): 217-236 (2004)
j21Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLFlavio Mignone, David Stephen Horner, Graziano Pesole: WebVar: a resource for the rapid estimation of relative site variability from multiple sequence alignments. Bioinformatics 20(8): 1331-1333 (2004)
j20Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAndreas Gisel, Maria Panetta, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Cecilia Saccone, Graziano Pesole: DNAfan: a software tool for automated extraction and analysis of user-defined sequence regions. Bioinformatics 20(18): 3676-3679 (2004)
j19Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGiulio Pavesi, Giancarlo Mauri, Graziano Pesole: An Algorithm for Finding Conserved Secondary Structure Motifs in Unaligned RNA Sequences. J. Comput. Sci. Technol. 19(1): 2-12 (2004)
j18Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGiulio Pavesi, Paolo Mereghetti, Giancarlo Mauri, Graziano Pesole: Weeder Web: discovery of transcription factor binding sites in a set of sequences from co-regulated genes. Nucleic Acids Research 32(Web-Server-Issue): 199-203 (2004)
j17Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLTiziana Castrignanò, Alessandro Canali, Giorgio Grillo, Sabino Liuni, Flavio Mignone, Graziano Pesole: CSTminer: a web tool for the identification of coding and noncoding conserved sequence tags through cross-species genome comparison. Nucleic Acids Research 32(Web-Server-Issue): 624-627 (2004)
2003
b1Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLCecilia Saccone, Graziano Pesole: Handbook of Comparative Genomics - Principles and Methodology. Wiley 2003, ISBN 978-0-471-39128-9, pp. I-XIV, 1-427
j16Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLDavid Stephen Horner, Graziano Pesole: The estimation of relative site variability among aligned homologous protein sequences. Bioinformatics 19(5): 600-606 (2003)
j15Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGiorgio Grillo, Flavio Licciulli, Sabino Liuni, Elisabetta Sbisà, Graziano Pesole: PatSearch: a program for the detection of patterns and structural motifs in nucleotide sequences. Nucleic Acids Research 31(13): 3608-3612 (2003)
c3Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGiulio Pavesi, Giancarlo Mauri, Graziano Pesole: Predicting Conserved Hairpin Motifs in Unaligned RNA Sequences. ICTAI 2003: 10-17
c2Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLPaola Bonizzoni, Graziano Pesole, Raffaella Rizzi: A Method to Detect Gene Structure and Alternative Splice Sites by Agreeing ESTs to a Genomic Sequence. WABI 2003: 63-77
2002
j14Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLAlessandra Larizza, Wojciech Makalowski, Graziano Pesole, Cecilia Saccone: Evolutionary Dynamics of Mammalian MRNA Untranslated Regions by Comparative Analysis of Orthologous Human, Artiodactyl and Rodent Gene Pairs. Computers & Chemistry 26(5): 479-490 (2002)
j13Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLMarcella Attimonelli, Domenico Catalano, Carmela Gissi, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Monica Santamaria, Graziano Pesole, Cecilia Saccone: MitoNuc: a database of nuclear genes coding for mitochondrial proteins. Update 2002. Nucleic Acids Research 30(1): 172-173 (2002)
j12Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGraziano Pesole, Sabino Liuni, Giorgio Grillo, Flavio Licciulli, Flavio Mignone, Carmela Gissi, Cecilia Saccone: UTRdb and UTRsite: specialized databases of sequences and functional elements of 5' and 3' untranslated regions of eukaryotic mRNAs. Update 2002. Nucleic Acids Research 30(1): 335-340 (2002)
2001
j11no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGiulio Pavesi, Giancarlo Mauri, Graziano Pesole: Methods for Pattern Discovery in Unaligned Biological Sequences. Briefings in Bioinformatics 2(4): 417 (2001)
c1no EE pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGiulio Pavesi, Giancarlo Mauri, Graziano Pesole: An algorithm for finding signals of unknown length in DNA sequences. ISMB (Supplement of Bioinformatics) 2001: 207-214
2000
j10Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGraziano Pesole, Giorgio Grillo, Alessandra Larizza, Sabino Liuni: The Untranslated Regions of Eukaryotic MRNAs: Structure, Function, Evolution and Bioinformatic Tools for Their Analysis. Briefings in Bioinformatics 1(3): 236-249 (2000)
j9Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGraziano Pesole, Sabino Liuni, Mark D'Souza: PatSearch: a pattern matcher software that finds functional elements in nucleotide and protein sequences and assesses their statistical significance. Bioinformatics 16(5): 439-450 (2000)
j8Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGraziano Pesole, Carmela Gissi, Domenico Catalano, Giorgio Grillo, Flavio Licciulli, Sabino Liuni, Marcella Attimonelli, Cecilia Saccone: MitoNuc and MitoAln: two related databases of nuclear genes coding for mitochondrial proteins. Nucleic Acids Research 28(1): 163-165 (2000)
j7Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGraziano Pesole, Sabino Liuni, Giorgio Grillo, Flavio Licciulli, Alessandra Larizza, Wojciech Makalowski, Cecilia Saccone: UTRdb and UTRsite: specialized databases of sequences and functional elements of 5' and 3' untranslated regions of eukaryotic mRNAs. Nucleic Acids Research 28(1): 193-196 (2000)
1999
j6Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGraziano Pesole, Sabino Liuni, Giorgio Grillo, Matilde Ippedico, Alessandra Larizza, Wojciech Makalowski, Cecilia Saccone: UTRdb: a specialized database of 5' and 3' untranslated regions of eukaryotic mRNAs. Nucleic Acids Research 27(1): 188-191 (1999)
1998
j5Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGraziano Pesole, Sabino Liuni, Giorgio Grillo, Cecilia Saccone: UTRdb: a specialized database of 5'- and 3'-untranslated regions of eukaryotic mRNAs. Nucleic Acids Research 26(1): 192-195 (1998)
1996
j4Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGiorgio Grillo, Marcella Attimonelli, Sabino Liuni, Graziano Pesole: CLEANUP: a fast computer program for removing redundancies from nucleotide sequence databases. Computer Applications in the Biosciences 12(1): 1-8 (1996)
j3Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLGraziano Pesole, Giorgio Grillo, Sabino Liuni: Databases of MRNA Untranslated Regions for Metazoa. Computers & Chemistry 20(1): 141-144 (1996)
1993
j2Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLN. Prunella, Sabino Liuni, Marcella Attimonelli, Graziano Pesole: FASTPAT: a fast and efficient algorithm for string searching in DNA sequences. Computer Applications in the Biosciences 9(5): 541-545 (1993)
j1Electronic Edition pubzone.org CiteSeerX Google scholar BibTeX bibliographical record in XMLSabino Liuni, N. Prunella, Graziano Pesole, Tiziana D'Orazio, Ettore Stella, Arcangelo Distante: SIMD parallelization of the WORDUP algorithm for detecting statistically significant patterns in DNA sequences. Computer Applications in the Biosciences 9(6): 701-707 (1993)

Coauthor Index

1Tyler S. Alioto[c7]
2Daniel Alonso-Alemany[j63] [j53]
3Nicola Ancona[j45] [c6] [j37] [j36] [j30] [c5] [j27] [c4]
4Anna Anselmo[j39] [j29]
5Marcella Attimonelli[j62] [j13] [j8] [j4] [j2]
6Bachir Balech[j64]
7Andrea Ballabio[j23]
8Sandro Banfi[j46] [j23]
9Diego di Bernardo[j23]
10Vitoantonio Bevilacqua[j61] [c9] [c8]
11Lara Boatti[j58]
12Angelo Boccia[j23]
13Paola Bonizzoni[j52] [j48] [j42] [j39] [j29] [j26] [c2]
14Ilenia Boria[j58]
15Massimiliano Borsani[j51]
16Claudia Calabrese[j62]
17Alessandro Canali[j17]
18Mariano Francesco Caratozzolo[j33]
19Massimo Carella[j36] [j30]
20Giorgio De Caro[j53]
21Danilo Carrabino[j49] [j39] [c6] [j32]
22Rita Casadio[j48] [j35] [j25]
23Tiziana Castrignanò[c10] [j57] [j56] [j51] [j49] [j48] [j47] [j39] [j32] [j31] [j29] [j17]
24Domenico Catalano[j36] [j33] [j13] [j8]
25Stefano Confalonieri[j23]
26Arianna Consiglio[j53]
27R. Cotugno[j30]
28Teresa Maria Creanza[j45]
29Annarita D'Addabbo[j45] [c6] [j37] [j30] [c5] [j27] [c4]
30Mattia D'Antonio[c10] [j57] [j56] [j51] [j49] [j48] [j39] [c6]
31Anna Maria D'Erchia[j56] [j48] [j39] [j33]
32Maria Angela Diroma[j62]
33Arcangelo Distante[j1]
34Giacinto Donvito[j64] [j63]
35Tiziana D'Orazio[j1]
36Mark D'Souza[j9]
37Jorge Duarte[j24]
38Berardino Elmi[j57]
39Giovanni Erbacci[c10]
40Piero Fariselli[j48]
41Michele Finelli[j48]
42Bruno Fosso[j63] [j53]
43Giuseppe Gasparre[j62]
44Vincenzo Alessandro Gennarino[j46]
45Ely Ignazio Giannino[j61] [c9]
46Andreas Gisel[j33] [j20]
47Carmela Gissi[j51] [j13] [j12] [j8]
48Matteo Giulietti[j56]
49Anna De Grassi[j33]
50Francesca Griggio[j51]
51Giorgio Grillo[j53] [j46] [j33] [j32] [j31] [j24] [j20] [j17] [j15] [j13] [j12] [j10] [j8] [j7] [j6] [j5] [j4] [j3]
52Alessandro Guffanti[j25] [j23]
53Roderic Guigó[c7]
54Cristiano Guttà[j62]
55Manuela Helmer-Citterich[j38] [j35] [j25]
56David Stephen Horner[j47] [j46] [j45] [j43] [j40] [j21] [j16]
57Michele Iacono[j24]
58Matilde Ippedico[j6]
59Paul J. Kersey[j24]
60Alessandra Larizza[j14] [j10] [j7] [j6]
61Flavio Licciulli[j53] [j48] [j46] [j39] [j33] [j32] [j24] [j20] [j15] [j13] [j12] [j8] [j7]
62Piepoli Licciulli[j36]
63Sabino Liuni[j53] [j47] [j46] [c6] [j37] [j36] [j33] [j32] [j31] [j30] [c5] [j27] [j24] [c4] [j20] [j17] [j15] [j13] [j12] [j10] [j9] [j8] [j7] [j6] [j5] [j4] [j3] [j2] [j1]
64Renato Lupi[j51]
65Lucilla Luzi[j23]
66Rosalia Maglietta[j45] [j37] [j36] [j30] [c5] [j27] [c4]
67Wojciech Makalowski[j14] [j7] [j6]
68Marina Mangiulli[j48] [j39]
69Pier Luigi Martelli[j48]
70Marinella Marzano[j63] [j53]
71Giancarlo Mauri[j42] [j28] [j25] [j22] [j19] [j18] [c3] [j11] [c1]
72A. D'Onorio De Meo[j39]
73Paolo D'Onorio De Meo[c10] [j57] [j56] [j51] [j48] [j47] [c6] [j32] [j31] [j29]
74Paolo Mereghetti[j28] [j18]
75Flavio Mignone[j58] [j48] [j46] [j45] [j44] [j39] [c6] [j32] [j31] [j24] [j23] [j21] [j17] [j12]
76Luciano Milanesi[j25]
77Alfonso Monaco[j64] [j63]
78Beatriz Navarro[j33]
79Pasquale Notarangelo[j64] [j63]
80Matteo Pallocca[c10] [j57]
81Maria Panetta[j20]
82Giovanni Paolella[j23]
83Daniele Paoletti[j57] [j56]
84Giulio Pavesi[j60] [j56] [j55] [j51] [j50] [j48] [j47] [j46] [j41] [j39] [j34] [j28] [j22] [j19] [j18] [c3] [j11] [c1]
85Francesco Perri[j37] [j36] [j30] [c5]
86Mauro Petrillo[j23]
87Ernesto Picardi[j62] [j61] [j59] [j57] [j56] [c9] [j52] [j49] [j48] [j47] [j46] [c8] [j44] [j42] [j39] [c7]
88Ada Piepoli[j37] [j36] [j30] [c5]
89Nicola Pietroleonardo[j61] [c9]
90Yuri Pirola[j52] [j42]
91Walter Pirovano[j40]
92Francesco Piva[j56]
93Gian Marco Prazzoli[j50]
94Giovanni Principato[j56]
95N. Prunella[j2] [j1]
96Daniele Ranieri[c8]
97Matteo Ré
Matteo Re
[j43] [j32]
98Vito Renó[c8]
99A. Riva[j39]
100Raffaella Rizzi[j52] [j48] [j42] [j39] [j29] [j26] [c2]
101Ivan Rossi[j48]
102Cecilia Saccone[j33] [j25] [j24] [j20] [b1] [j14] [j13] [j12] [j8] [j7] [j6] [j5]
103Michael Sammeth[j47]
104Nico Sanna[j57] [j32]
105Monica Santamaria[j63] [j53] [j13]
106Mariangela Santorsola[j62]
107M. Savino[j30]
108Elisabetta Sbisà[j33] [j15]
109Domenico Simone[j62] [j61]
110Marco Stefani[j28]
111Ettore Stella[j1]
112Vincenzo Stola[c8]
113Fabio Stroppa[j61] [c9]
114Ivano Giuseppe Talamo[j31] [j29]
115Apollonia Tullo[j33]
116Antonio Turi[j46] [j33]
117Gabriel Valiente[j63] [j54] [j53]
118Giorgio Valle[j25]
119Alessio Valletti[j48]
120Gianluca Della Vedova[j52]
121Saverio Vicario[j64]
122Federico Zambelli[j60] [j56] [j55] [j50] [j48] [j41] [j34] [j28]
123Andrea Zauli[j48]

 

Last update 2016-11-17 00:33 CET by the DBLP TeamThis material is Open Data Data released under the ODC-BY 1.0 license — See also our legal information page