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@inproceedings{DBLP:conf/bcb/Aguilar-BonavidesLNLA12,
author = {Clemente Aguilar{-}Bonavides and
Ming{-}Ying Leung and
Ernesto S. Nakayasu and
Felipe G. Lopes and
Igor C. Almeida},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Computational tool for large-scale GPIomic analysis},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {585--587},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383029},
doi = {10.1145/2382936.2383029},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Aguilar-BonavidesLNLA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Al-NasrCSRZH12,
author = {Kamal Al{-}Nasr and
Lin Chen and
Dong Si and
Desh Ranjan and
Mohammad Zubair and
Jing He},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Building the initial chain of the proteins through de novo modeling
of the cryo-electron microscopy volume data at the medium resolutions},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {490--497},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382999},
doi = {10.1145/2382936.2382999},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Al-NasrCSRZH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/AndersonP12,
author = {Paul E. Anderson and
Michael Peterson},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Empirical metabolite identification via {GA} feature selection and
Bayes classification},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {591--593},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383032},
doi = {10.1145/2382936.2383032},
timestamp = {Tue, 25 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/AndersonP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BajcsyCB12,
author = {Peter Bajcsy and
Joe Chalfoun and
Mary Brady},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {How to select microscopy image similarity metrics?},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {613--615},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383040},
doi = {10.1145/2382936.2383040},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/BajcsyCB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BarekeSVHSC12,
author = {Eric Bareke and
Jean{-}Fran{\c{c}}ois Spinella and
Ramon Vidal and
Jasmine Healy and
Daniel Sinnett and
Mikl{\'{o}}s Cs{\"{u}}r{\"{o}}s},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {A novel mathematical basis for predicting somatic single nucleotide
variants from next-generation sequencing},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {533--535},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383012},
doi = {10.1145/2382936.2383012},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/BarekeSVHSC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/BasithC12,
author = {Shaherin Basith and
Sangdun Choi},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {An in-depth analysis of the molecular dynamics and structural aspects
of {IKB} proteins},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {513--514},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383004},
doi = {10.1145/2382936.2383004},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/BasithC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/CaglarP12,
author = {Mehmet Umut Caglar and
Ranadip Pal},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Complexity reduction of stochastic master equation simulation based
on Kronecker product analysis},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {186--193},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382960},
doi = {10.1145/2382936.2382960},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/CaglarP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/CaoC12,
author = {Mengfei Cao and
Lenore J. Cowen},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Remote homology detection on alpha-structural proteins using simulated
evolution},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {353--360},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382981},
doi = {10.1145/2382936.2382981},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/CaoC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Caoili12,
author = {Salvador Eugenio C. Caoili},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Using quantitative dose-response data to benchmark B-cell epitope
prediction for antipeptide antibodies},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {629--636},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383048},
doi = {10.1145/2382936.2383048},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Caoili12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChaitankarGEGP12,
author = {Vijender Chaitankar and
Preetam Ghosh and
Mohamed O. Elasri and
Kurt A. Gust and
Edward J. Perkins},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Genome scale inference of transcriptional regulatory networks using
mutual information on complex interactions},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {643--648},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383051},
doi = {10.1145/2382936.2383051},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChaitankarGEGP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChandakkarVLL12,
author = {Parag S. Chandakkar and
Ragav Venkatesan and
Baoxin Li and
Helen K. Li},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {A machine-learning approach to retrieving diabetic retinopathy images},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {588--589},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383030},
doi = {10.1145/2382936.2383030},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChandakkarVLL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChenP12,
author = {Brian Y. Chen and
Debdas Paul},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {A volumetric method for representing and comparing regions of electrostatic
focusing in molecular structure},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {242--249},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382967},
doi = {10.1145/2382936.2382967},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChenP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChengZWYLHW12,
author = {Wei Cheng and
Xiang Zhang and
Yubao Wu and
Xiaolin Yin and
Jing Li and
David Heckerman and
Wei Wang},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Inferring novel associations between {SNP} sets and gene sets in eQTL
study using sparse graphical model},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {466--473},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382996},
doi = {10.1145/2382936.2382996},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChengZWYLHW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChithambaramPX12,
author = {Shivapriya Chithambaram and
Ramanandan Prabhakaran and
Xuhua Xia},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {A comparative study of codon adaptation in ssDNA and dsDNA phages},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {598--600},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383035},
doi = {10.1145/2382936.2383035},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChithambaramPX12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Choi12,
author = {Yongwook Choi},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {A fast computation of pairwise sequence alignment scores between a
protein and a set of single-locus variants of another protein},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {414--417},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382989},
doi = {10.1145/2382936.2382989},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Choi12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChuaBTD12,
author = {Huey{-}Eng Chua and
Sourav S. Bhowmick and
Lisa Tucker{-}Kellogg and
C. Forbes Dewey Jr.},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {{STEROID:} in silico heuristic target combination identification for
disease-related signaling networks},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {4--11},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382937},
doi = {10.1145/2382936.2382937},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ChuaBTD12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ChuaK12,
author = {Watson Wei Khong Chua and
Jung{-}Jae Kim},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Semantic querying over knowledge in biomedical text corpora annotated
with multiple ontologies},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {400--407},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382987},
doi = {10.1145/2382936.2382987},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ChuaK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/CinagliaTV12,
author = {Pietro Cinaglia and
Giuseppe Tradigo and
Pierangelo Veltri},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {A system for acquiring and management of {ECG} signals by using mobile
devices: a support for first intervention in heart attacks},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {677--682},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383058},
doi = {10.1145/2382936.2383058},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/CinagliaTV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DSouzaN12,
author = {Jennifer D'Souza and
Vincent Ng},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Anaphora resolution in biomedical literature: a hybrid approach},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {113--122},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382951},
doi = {10.1145/2382936.2382951},
timestamp = {Fri, 18 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/DSouzaN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DeshpandeS12,
author = {Neelam N. Deshpande and
John A. Springer},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Parallelization of the spectral deconvolution stage of the proteomic
discovery process},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {673--676},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383057},
doi = {10.1145/2382936.2383057},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/DeshpandeS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DeyLAMSK12,
author = {Sanjoy Dey and
Kelvin O. Lim and
Gowtham Atluri and
Angus W. MacDonald III and
Michael S. Steinbach and
Vipin Kumar},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {A pattern mining based integrative framework for biomarker discovery},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {498--505},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383000},
doi = {10.1145/2382936.2383000},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/DeyLAMSK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DhifliSN12,
author = {Wajdi Dhifli and
Rabie Saidi and
Engelbert Mephu Nguifo},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {A novel approach for mining representative spatial motifs of proteins},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {506--508},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383001},
doi = {10.1145/2382936.2383001},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/DhifliSN12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DuZLGMNSZ12,
author = {Nan Du and
Yuan Zhang and
Kang Li and
Jing Gao and
Supriya D. Mahajan and
Bindukumar B. Nair and
Stanley A. Schwartz and
Aidong Zhang},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Evolutionary analysis of functional modules in dynamic {PPI} networks},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {250--257},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382968},
doi = {10.1145/2382936.2382968},
timestamp = {Wed, 16 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/DuZLGMNSZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/DuanZCDW12,
author = {Junbo Duan and
Ji{-}Gang Zhang and
Hongbao Cao and
Hong{-}Wen Deng and
Yu{-}Ping Wang},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Copy number variation estimation from multiple next-generation sequencing
samples},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {555--557},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383019},
doi = {10.1145/2382936.2383019},
timestamp = {Tue, 19 Nov 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/DuanZCDW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/El-ManzalawyDH12,
author = {Yasser El{-}Manzalawy and
Drena Dobbs and
Vasant G. Honavar},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Predicting protective bacterial antigens using random forest classifiers},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {426--433},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382991},
doi = {10.1145/2382936.2382991},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/El-ManzalawyDH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ErtenALCK12,
author = {Sinan Erten and
Marzieh Ayati and
Yu Liu and
Mark R. Chance and
Mehmet Koyut{\"{u}}rk},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Algorithms for detecting complementary SNPs within a region of interest
that are associated with diseases},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {194--201},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382961},
doi = {10.1145/2382936.2382961},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ErtenALCK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FeldhahnSDRSK12,
author = {Magdalena Feldhahn and
Karin Schilbach and
Pierre D{\"{o}}nnes and
Hans{-}Georg Rammensee and
Benjamin Schubert and
Oliver Kohlbacher},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {miHA-match: computational detection of tissue-specific minor histocompatibility
antigens},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {625--626},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383046},
doi = {10.1145/2382936.2383046},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/FeldhahnSDRSK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FinchH12,
author = {Craig A. Finch and
James J. Hickman},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {A continuum hard-sphere model of protein adsorption},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {573--575},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383025},
doi = {10.1145/2382936.2383025},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/FinchH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FlynnJS12,
author = {Emily Flynn and
Filip Jagodzinski and
Ileana Streinu},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Towards sequence-based {DNA} flexibility analysis},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {607--609},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383038},
doi = {10.1145/2382936.2383038},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/FlynnJS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Franklin12,
author = {Dino Franklin},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Protein blocks versus hydrogen bonds based alphabets for protein structure
classification},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {139--146},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382954},
doi = {10.1145/2382936.2382954},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Franklin12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/FuWVM12,
author = {Chen{-}Ping Fu and
Catherine E. Welsh and
Fernando Pardo{-}Manuel de Villena and
Leonard McMillan},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Inferring ancestry in admixed populations using microarray probe intensities},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {105--112},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382950},
doi = {10.1145/2382936.2382950},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/FuWVM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GallantLKCH12,
author = {Andrew Gallant and
Mark D. M. Leiserson and
Maxim Kachalov and
Lenore J. Cowen and
Benjamin J. Hescott},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Genecentric: a package to uncover graph-theoretic structure in high-throughput
epistasis data},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {576--578},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383026},
doi = {10.1145/2382936.2383026},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GallantLKCH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GaoA12,
author = {Xi Gao and
Tomasz Arodz},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Robust differential co-expression discovery: an insight into pharmacodynamics
of tyrosine kinase inhibitor},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {604--606},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383037},
doi = {10.1145/2382936.2383037},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GaoA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GaoMBSYGW12,
author = {Wenxuan Gao and
Lijia Ma and
Christopher Brown and
Matthew Slattery and
Philip S. Yu and
Robert L. Grossman and
Kevin P. White},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Discovering geometric patterns in genomic data},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {147--154},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382955},
doi = {10.1145/2382936.2382955},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GaoMBSYGW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GeGDZ12,
author = {Liang Ge and
Jing Gao and
Nan Du and
Aidong Zhang},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Finding informative genes for prostate cancer: a general framework
of integrating heterogeneous sources},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {274--281},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382971},
doi = {10.1145/2382936.2382971},
timestamp = {Wed, 16 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/GeGDZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GosuC12,
author = {Vijayakumar Gosu and
Sangdun Choi},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Phylogenetic and functional divergence analysis of vertebrate {IRAK}
family members},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {516--517},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383006},
doi = {10.1145/2382936.2383006},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GosuC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GutierrezMTDBMG12,
author = {Andres H. Guti{\'{e}}rrez and
Leonard Moise and
Frances Terry and
Kristen Dasilva and
Chris Bailey{-}Kellogg and
William D. Martin and
Anne S. De Groot},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Immunoinformatic analysis of Chinese hamster ovary {(CHO)} protein
contaminants in therapeutic protein formulations},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {637--642},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383049},
doi = {10.1145/2382936.2383049},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GutierrezMTDBMG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/GuzziVC12,
author = {Pietro Hiram Guzzi and
Pierangelo Veltri and
Mario Cannataro},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Unraveling multiple miRNA-mRNA associations through a graph-based
approach},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {649--654},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383052},
doi = {10.1145/2382936.2383052},
timestamp = {Wed, 19 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/GuzziVC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HallMR12,
author = {Michael Hall and
Mina Maleki and
Luis Rueda},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Multi-level structural domain-domain interactions for prediction of
obligate and non-obligate protein-protein interactions},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {518--520},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383007},
doi = {10.1145/2382936.2383007},
timestamp = {Thu, 09 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HallMR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HatemKC12,
author = {Ayat Hatem and
Kamer Kaya and
{\"{U}}mit V. {\c{C}}ataly{\"{u}}rek},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Microarray vs. RNA-Seq: a comparison for active subnetwork discovery},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {450--457},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382994},
doi = {10.1145/2382936.2382994},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HatemKC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HillSS12,
author = {Steven Hill and
Bismita Srichandan and
Rajshekhar Sunderraman},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {An iterative MapReduce approach to frequent subgraph mining in biological
datasets},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {661--666},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383055},
doi = {10.1145/2382936.2383055},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HillSS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HossainPLJBR12,
author = {K. S. M. Tozammel Hossain and
Debprakash Patnaik and
Srivatsan Laxman and
Prateek Jain and
Chris Bailey{-}Kellogg and
Naren Ramakrishnan},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Improved multiple sequence alignments using coupled pattern mining},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {28--35},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382940},
doi = {10.1145/2382936.2382940},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HossainPLJBR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HouZH12,
author = {Minmei Hou and
Louxin Zhang and
Robert S. Harris},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Alignment seeding strategies using contiguous pyrimidine purine matches},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {384--391},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382985},
doi = {10.1145/2382936.2382985},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HouZH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/HuangB12,
author = {Yao{-}ming Huang and
Christopher Bystroff},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Exploring objective functions and cross-terms in the optimization
of an energy function for protein design},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {155--162},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382956},
doi = {10.1145/2382936.2382956},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/HuangB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JagodzinskiS12,
author = {Filip Jagodzinski and
Ileana Streinu},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Towards biophysical validation of constraint modeling for rigidity
analysis of proteins},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {408--413},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382988},
doi = {10.1145/2382936.2382988},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/JagodzinskiS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JohnsonFK12,
author = {Nicholas Johnson and
Gang Fang and
Rui Kuang},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Approximate subspace pattern mining for mapping copy-number variations},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {616},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383041},
doi = {10.1145/2382936.2383041},
timestamp = {Mon, 18 Feb 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/JohnsonFK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/JudehNZ12,
author = {Thair Judeh and
Tin Chi Nguyen and
Dongxiao Zhu},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {\emph{QSEA} for fuzzy subgraph querying of {KEGG} pathways},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {474--481},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382997},
doi = {10.1145/2382936.2382997},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/JudehNZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KaddiPW12,
author = {Chanchala Kaddi and
R. Mitchell Parry and
May D. Wang},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Multivariate hypergeometric similarity measure},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {234--241},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382966},
doi = {10.1145/2382936.2382966},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KaddiPW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KarVTR12,
author = {Saradindu Kar and
Deepak Vijayakeerthi and
Ashish V. Tendulkar and
Balaraman Ravindran},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Functional site prediction by exploiting correlations between labels
of interacting residues},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {76--83},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382946},
doi = {10.1145/2382936.2382946},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KarVTR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KimL12,
author = {Jung{-}Jae Kim and
Anh Tuan Luu},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Hybrid pattern matching for complex ontology term recognition},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {289--296},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382973},
doi = {10.1145/2382936.2382973},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/KimL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KolliSMHJHGJH12,
author = {Aditya Reddy Kolli and
Frank Sommerhage and
Peter Molnar and
Jonathan E. Hood and
Jerry J. Jenkins and
Faraz Hussain and
Arup K. Ghosh and
Sumit Kumar Jha and
James J. Hickman},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {A computational metabolic model of the {NG108-15} cell for high content
drug screening with electrophysiological readout},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {530--532},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383011},
doi = {10.1145/2382936.2383011},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KolliSMHJHGJH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/KothariOPW12,
author = {Sonal Kothari and
Adeboye O. Osunkoya and
John H. Phan and
May D. Wang},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Biological interpretation of morphological patterns in histopathological
whole-slide images},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {218--225},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382964},
doi = {10.1145/2382936.2382964},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/KothariOPW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Kulekci12,
author = {M. Oguzhan K{\"{u}}lekci},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {On enumerating the {DNA} sequences},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {442--449},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382993},
doi = {10.1145/2382936.2382993},
timestamp = {Wed, 29 May 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/Kulekci12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Kuroshu12,
author = {Reginaldo Kuroshu},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Non-overlapping clone pooling for high-throughput sequencing},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {84--89},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382947},
doi = {10.1145/2382936.2382947},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Kuroshu12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiBLRBZ12,
author = {Hui Li and
Cathy Buyea and
Xiaoyi Li and
Murali Ramanathan and
Lawrence Bone and
Aidong Zhang},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {3D bone microarchitecture modeling and fracture risk prediction},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {361--368},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382982},
doi = {10.1145/2382936.2382982},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiBLRBZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiCW12,
author = {Jingyao Li and
Hongbao Cao and
Yu{-}Ping Wang},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Classification of multicolor fluorescence \emph{in-situ} hybridization
{(M-FISH)} image using regularized multinomial logistic regression},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {551--554},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383018},
doi = {10.1145/2382936.2383018},
timestamp = {Tue, 25 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiCW12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiDZ12,
author = {Kang Li and
Nan Du and
Aidong Zhang},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Detecting {ECG} abnormalities via transductive transfer learning},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {210--217},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382963},
doi = {10.1145/2382936.2382963},
timestamp = {Wed, 16 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiDZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiRS12,
author = {Junjie Li and
Sanjay Ranka and
Sartaj Sahni},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Parallel syntenic alignment on GPUs},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {266--273},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382970},
doi = {10.1145/2382936.2382970},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiRS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiSGC12,
author = {Jie Li and
Vishakha Sharma and
Narayan Ganesan and
Adriana B. Compagnoni},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Simulation and study of large-scale bacteria-materials interactions
via BioScape enabled by GPUs},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {610--612},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383039},
doi = {10.1145/2382936.2383039},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiSGC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LinH12,
author = {Jhih{-}rong Lin and
Jianjun Hu},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Nuclear localization signal prediction based on sequential pattern
mining},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {536--538},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383013},
doi = {10.1145/2382936.2383013},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LinH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LindsaySZM12,
author = {James Lindsay and
Hamed Salooti and
Alexander Zelikovsky and
Ion I. Mandoiu},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Scalable genome scaffolding using integer linear programming},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {377--383},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382984},
doi = {10.1145/2382936.2382984},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LindsaySZM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LipscombZC12,
author = {Tyson J. Lipscomb and
Anqi Zou and
Samuel S. Cho},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Parallel verlet neighbor list algorithm for GPU-optimized {MD} simulations},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {321--328},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382977},
doi = {10.1145/2382936.2382977},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LipscombZC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiuBVP12,
author = {Jie Liu and
Elizabeth S. Burnside and
Humberto J. Vidaillet and
David Page},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {A collective ranking method for genome-wide association studies},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {313--320},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382976},
doi = {10.1145/2382936.2382976},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/LiuBVP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LiuTSKI12,
author = {Xinyue Liu and
Luke J. Tallon and
Lisa Sadzewicz and
Elena N. Klyushnenkova and
Yurij Ionov},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Serum antibody repertoire profiling using virtual antigen screen},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {623--624},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383045},
doi = {10.1145/2382936.2383045},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LiuTSKI12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LossBCASP12,
author = {Leandro A. Loss and
George Bebis and
Hang Chang and
Manfred Auer and
Purbasha Sarkar and
Bahram Parvin},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Automatic segmentation and quantification of filamentous structures
in electron tomography},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {170--177},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382958},
doi = {10.1145/2382936.2382958},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LossBCASP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LouzadaLH12,
author = {Vitor H. P. Louzada and
Fabr{\'{\i}}cio Martins Lopes and
Ronaldo Fumio Hashimoto},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {A Monte Carlo approach to measure the robustness of Boolean networks},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {696--699},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383062},
doi = {10.1145/2382936.2383062},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LouzadaLH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LuHQ12,
author = {Meng Lu and
Jianhua Z. Huang and
Xiaoning Qian},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Supervised logistic principal component analysis for pathway based
genome-wide association studies},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {52--59},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382943},
doi = {10.1145/2382936.2382943},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LuHQ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/LuoYLLWYLT12,
author = {Ruibang Luo and
Chang Yu and
Chi{-}Man Liu and
Tak Wah Lam and
Thomas K. F. Wong and
Siu{-}Ming Yiu and
Ruiqiang Li and
Hing{-}Fung Ting},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Efficient SNP-sensitive alignment and database-assisted {SNP} calling
for low coverage samples},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {163--169},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382957},
doi = {10.1145/2382936.2382957},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/LuoYLLWYLT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MaLR12,
author = {Qi Ma and
Wen Liu and
Michael G. Rosenfeld},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {mHMM (multivariate hidden Markov model) application in studying {BRD4}
and {JMJD6} function cooperatively on promoter-proximal polymerase-II
(Pol {II)} pausing release},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {515},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383005},
doi = {10.1145/2382936.2383005},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MaLR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ManaviWT12,
author = {Kasra Manavi and
Bridget S. Wilson and
Lydia Tapia},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Simulation and analysis of antibody aggregation on cell surfaces using
motion planning and graph analysis},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {458--465},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382995},
doi = {10.1145/2382936.2382995},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ManaviWT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MangulCSBBK12,
author = {Serghei Mangul and
Adrian Caciula and
Sahar Al Seesi and
Dumitru Brinza and
Abdul Rouf Banday and
Rahul Kanadia},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {An integer programming approach to novel transcript reconstruction
from paired-end RNA-Seq reads},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {369--376},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382983},
doi = {10.1145/2382936.2382983},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MangulCSBBK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MarhonK12,
author = {Sajid Marhon and
Stefan C. Kremer},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {A brief comparison of {DSP} and {HMM} methods for gene finding},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {582--584},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383028},
doi = {10.1145/2382936.2383028},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MarhonK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MarieYDM12,
author = {Marie De Laet and
Yves Dehouck and
Dimitri Gilis and
Marianne Rooman},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Identification of protein stability patches that pinpoint key structural
or functional sites},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {521--523},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383008},
doi = {10.1145/2382936.2383008},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MarieYDM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MizutaM12,
author = {Satoshi Mizuta and
Taro Mori},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Searching for the relics of primitive codons},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {524--526},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383009},
doi = {10.1145/2382936.2383009},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MizutaM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MolloyS12,
author = {Kevin Molloy and
Amarda Shehu},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Biased decoy sampling to aid the selection of near-native protein
conformations},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {131--138},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382953},
doi = {10.1145/2382936.2382953},
timestamp = {Sat, 24 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MolloyS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MoraesJG12,
author = {Marcelo Filipe Breda de Moraes and
Nilson Nicolau Junior and
Silvana Giuliatti},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Macromolecular modeling of protein structure - {SCI1} of \emph{Nicotiana
tabacum L}},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {570--572},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383024},
doi = {10.1145/2382936.2383024},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/MoraesJG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/MorganCA12,
author = {Jeremy C. Morgan and
Robert W. Chapman and
Paul E. Anderson},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {A next generation sequence processing and analysis platform with integrated
cloud-storage and high performance computing resources},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {594},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383033},
doi = {10.1145/2382936.2383033},
timestamp = {Tue, 25 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/MorganCA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/NathTEA12,
author = {Shuvra Kanti Nath and
Shawna L. Thomas and
Chinwe Ekenna and
Nancy M. Amato},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {A multi-directional rapidly exploring random graph (mRRG) for protein
folding},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {44--51},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382942},
doi = {10.1145/2382936.2382942},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/NathTEA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/OliveiraT12,
author = {Lariza Laura de Oliveira and
Renato Tin{\'{o}}s},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Entropy-based evaluation function for the investigation of genetic
code adaptability},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {558--560},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383020},
doi = {10.1145/2382936.2383020},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/OliveiraT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/OlsonS12,
author = {Brian S. Olson and
Amarda Shehu},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {An evolutionary search framework to efficiently sample local minima
in the protein conformational space},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {590},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383031},
doi = {10.1145/2382936.2383031},
timestamp = {Sat, 24 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/OlsonS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PandeyCMM12,
author = {Gaurav Pandey and
Ariella Cohain and
Jennifer Miller and
Miriam Merad},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Decoding dendritic cell function through module and network analysis},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {627--628},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383047},
doi = {10.1145/2382936.2383047},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/PandeyCMM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PharrOA12,
author = {Edward Pharr and
Aspen Olmsted and
Paul E. Anderson},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {gLIMS: Google cloud-based laboratory information management system
for {NMR} metabolomics},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {595--597},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383034},
doi = {10.1145/2382936.2383034},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/PharrOA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/PrezzaFVPP12,
author = {Nicola Prezza and
Cristian Del Fabbro and
Francesco Vezzi and
Emanuale De Paoli and
Alberto Policriti},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {{ERNE-BS5:} aligning BS-treated sequences by multiple hits on a 5-letters
alphabet},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {12--19},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382938},
doi = {10.1145/2382936.2382938},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/PrezzaFVPP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RahmanPBM12,
author = {Ahsanur Rahman and
Christopher L. Poirel and
David Badger and
T. M. Murali},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Reverse engineering molecular hypergraphs},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {68--75},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382945},
doi = {10.1145/2382936.2382945},
timestamp = {Wed, 27 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RahmanPBM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RajapakseCPRV12,
author = {Vinodh N. Rajapakse and
Wojciech Czaja and
Yves Pommier and
William C. Reinhold and
Sudhir Varma},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Predicting expression-related features of chromosomal domain organization
with network-structured analysis of gene expression and chromosomal
location},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {226--233},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382965},
doi = {10.1145/2382936.2382965},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RajapakseCPRV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RashidSNHPS12,
author = {Mahmood A. Rashid and
Swakkhar Shatabda and
M. A. Hakim Newton and
Tamjidul Hoque and
Duc Nghia Pham and
Abdul Sattar},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Random-walk: a stagnation recovery technique for simplified protein
structure prediction},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {620--622},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383043},
doi = {10.1145/2382936.2383043},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RashidSNHPS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RezaeianR12,
author = {Iman Rezaeian and
Luis Rueda},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {A new algorithm for finding enriched regions in ChIP-Seq data},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {282--288},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382972},
doi = {10.1145/2382936.2382972},
timestamp = {Wed, 08 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RezaeianR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RuanERTBQF12,
author = {Yang Ruan and
Saliya Ekanayake and
Mina Rho and
Haixu Tang and
Seung{-}Hee Bae and
Judy Qiu and
Geoffrey C. Fox},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {{DACIDR:} deterministic annealed clustering with interpolative dimension
reduction using a large collection of 16S rRNA sequences},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {329--336},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382978},
doi = {10.1145/2382936.2382978},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RuanERTBQF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RuanJGLHHMCKH12,
author = {Jianhua Ruan and
Md. Jamiul Jahid and
Fei Gu and
Chengwei Lei and
Yi{-}Wen Huang and
Ya{-}Ting Hsu and
David G. Mutch and
Chun{-}Liang Chen and
Nameer B. Kirma and
Tim Hui{-}Ming Huang},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Network-based classification of recurrent endometrial cancers using
high-throughput {DNA} methylation data},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {418--425},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382990},
doi = {10.1145/2382936.2382990},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/RuanJGLHHMCKH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/RyanP12,
author = {Daniel Ryan and
Dimitris Papamichail},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Rational design of orthogonal libraries of protein coding genes},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {482--489},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382998},
doi = {10.1145/2382936.2382998},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/RyanP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SaeedHPK12,
author = {Fahad Saeed and
Jason D. Hoffert and
Trairak Pisitkun and
Mark A. Knepper},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {High performance phosphorylation site assignment algorithm for mass
spectrometry data using multicore systems},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {667--672},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383056},
doi = {10.1145/2382936.2383056},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/SaeedHPK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SaidiANM12,
author = {Rabie Saidi and
Sabeur Aridhi and
Engelbert Mephu Nguifo and
Mondher Maddouri},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Feature extraction in protein sequences classification: a new stability
measure},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {683--689},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383060},
doi = {10.1145/2382936.2383060},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/SaidiANM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ShatabdaNPS12,
author = {Swakkhar Shatabda and
Muhammad Abdul Hakim Newton and
Duc Nghia Pham and
Abdul Sattar},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Memory-based local search for simplified protein structure prediction},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {345--352},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382980},
doi = {10.1145/2382936.2382980},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ShatabdaNPS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ShatkayNNHRSTSJBIK12,
author = {Hagit Shatkay and
Ramya Narayanaswamy and
Santosh S. Nagaral and
Na Harrington and
M. V. Rohith and
Gowri Somanath and
Ryan Tarpine and
Kyle Schutter and
Tim Johnstone and
Dorothea Blostein and
Sorin Istrail and
Chandra Kambhamettu},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {OCR-based image features for biomedical image and article classification:
identifying documents relevant to cis-regulatory elements},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {98--104},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382949},
doi = {10.1145/2382936.2382949},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/ShatkayNNHRSTSJBIK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/Shotland12,
author = {Yoram Shotland},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {454 and SOLiD{\texttrademark} complementary used to filter and build
the draft genome of highly abundant cyanobacteria in biological desert
crust},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {510--512},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383003},
doi = {10.1145/2382936.2383003},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/Shotland12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SimoesMBF12,
author = {S{\'{e}}rgio Nery Sim{\~{o}}es and
David Correa Martins Jr. and
Helena Paula Brentani and
Ronaldo Fumio Hashimoto},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Shortest paths ranking methodology to identify alterations in {PPI}
networks of complex diseases},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {561--563},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383021},
doi = {10.1145/2382936.2383021},
timestamp = {Tue, 19 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/SimoesMBF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SlawekA12,
author = {Janusz Slawek and
Tomasz Arodz},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {{ADANET:} inferring gene regulatory networks using ensemble classifiers},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {434--441},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382992},
doi = {10.1145/2382936.2382992},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/SlawekA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/SolimanDVMBNWKG12,
author = {Jan Lorenz Soliman and
Alex Dekhtyar and
Jennifer Vanderkelen and
Aldrin Montana and
Michael Black and
Emily Neal and
Kevin Webb and
Chris Kitts and
Anya Goodman},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Microbial source tracking by molecular fingerprinting},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {617--619},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383042},
doi = {10.1145/2382936.2383042},
timestamp = {Wed, 12 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/SolimanDVMBNWKG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/St-OngeHSHBS12,
author = {Pascal St{-}Onge and
Robert Hamon and
Virginie Saillour and
Jasmine Healy and
Patrick Beaulieu and
Daniel Sinnett},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {ngALL database: a flexible framework for the management and integration
of childhood leukemia next generation sequencing data},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {542--544},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383015},
doi = {10.1145/2382936.2383015},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/St-OngeHSHBS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TatawRR12,
author = {Oben M. Tataw and
G. Venugopala Reddy and
Amit K. Roy{-}Chowdhury},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Alignment of real-time live-cell growth data for quantitative analysis
of growth at the shoot apex of Arabidopsis \emph{thaliana}: deducing
the relationship between primordia growth, gene expression and cell
behaviors},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {258--265},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382969},
doi = {10.1145/2382936.2382969},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/TatawRR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TsaiBSR12,
author = {Ming{-}Chi Tsai and
Guy E. Blelloch and
Russell Schwartz and
R. Ravi},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Coalescent-based method for learning parameters of admixture events
from large-scale genetic variation data},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {90--97},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382948},
doi = {10.1145/2382936.2382948},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/TsaiBSR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TsangD12,
author = {Herbert H. Tsang and
Denny C. Dai},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {{RNA-DV:} an interactive tool for editing and visualizing {RNA} secondary
structures},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {601--603},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383036},
doi = {10.1145/2382936.2383036},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/TsangD12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/TuCP0G12,
author = {Yi{-}Cheng Tu and
Shaoping Chen and
Sagar Pandit and
Anand Kumar and
Vladimir Grupcev},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Efficient {SDH} computation in molecular simulations data},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {527--529},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383010},
doi = {10.1145/2382936.2383010},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/TuCP0G12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/VoP12,
author = {Nam S. Vo and
Vinhthuy Phan},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {\emph{Pattern analysis}: a web-based tool for analyzing response patterns
in low-replication, many-treatment gene expression data},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {539--541},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383014},
doi = {10.1145/2382936.2383014},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/VoP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/VoPS12,
author = {Nam S. Vo and
Vinhthuy Phan and
Thomas R. Sutter},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Predicting possible directed-graph patterns of gene expressions in
studies involving multiple treatments},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {579--581},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383027},
doi = {10.1145/2382936.2383027},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/VoPS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/VolkmerSC12,
author = {Jens{-}Peter Volkmer and
Debashis Sahoo and
Robert K. Chin},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Systems biology approach to identify markers of differentiation in
bladder cancer},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {509},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383002},
doi = {10.1145/2382936.2383002},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/VolkmerSC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/VoorstF12,
author = {Jeffrey R. Van Voorst and
Barry C. Finzel},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Rapid efficient macromolecular substructure searching in a cloud},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {548--550},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383017},
doi = {10.1145/2382936.2383017},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/VoorstF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/VoorstTK12,
author = {Jeffrey R. Van Voorst and
Yiying Tong and
Leslie A. Kuhn},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {ArtSurf: a method for deformable partial matching of protein small-molecule
binding sites},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {36--43},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382941},
doi = {10.1145/2382936.2382941},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/VoorstTK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangC12,
author = {Shuo Wang and
Yang Cao},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Efficient implementation of the hybrid method for stochastic simulation
of biochemical systems},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {305--312},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382975},
doi = {10.1145/2382936.2382975},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/WangC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WangQ12,
author = {Yijie Wang and
Xiaoning Qian},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Functional module identification by block modeling using simulated
annealing with path relinking},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {123--130},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382952},
doi = {10.1145/2382936.2382952},
timestamp = {Mon, 01 Mar 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/WangQ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WonCCBDKMSAP12,
author = {Daehan Won and
Chun{-}An Chou and
Wanpracha Art Chaovalitwongse and
Tanya Y. Berger{-}Wolf and
Bhaskar DasGupta and
Ashfaq A. Khokhar and
Marco Maggioni and
Saad I. Sheikh and
Mary V. Ashley and
Jason Palagi},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {An integrated optimization framework for inferring two generation
kinships and parental genotypes from microsatellite samples},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {392--399},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382986},
doi = {10.1145/2382936.2382986},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/WonCCBDKMSAP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WuKPLZ12,
author = {Min Wu and
Chee Keong Kwoh and
Teresa M. Przytycka and
Jing Li and
Jie Zheng},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Integration of genomic and epigenomic features to predict meiotic
recombination hotspots in human and mouse},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {297--304},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382974},
doi = {10.1145/2382936.2382974},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WuKPLZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WuKZL12,
author = {Min Wu and
Chee Keong Kwoh and
Jie Zheng and
Xiaoli Li},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {NetPipe: a network-based pipeline for discovery of genes and protein
complexes regulating meiotic recombination hotspots},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {20--27},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382939},
doi = {10.1145/2382936.2382939},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/WuKZL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/WuOBAS12,
author = {Ruijin Wu and
Aysegul Ozkan and
Antonette Bennett and
Mavis Agbandje{-}McKenna and
Meera Sitharam},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Robustness measure for an adeno-associated viral shell self-assembly
is accurately predicted by configuration space atlasing using {EASAL}},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {690--695},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383061},
doi = {10.1145/2382936.2383061},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/WuOBAS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/XieASMCG12,
author = {Bingqing Xie and
Gady Agam and
Dinanath Sulakhe and
Natalia Maltsev and
Bhadrachalam Chitturi and
T. Conrad Gilliam},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Prediction of candidate genes for neuropsychiatric disorders using
feature-based enrichment},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {564--566},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383022},
doi = {10.1145/2382936.2383022},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/XieASMCG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YehdegoZTKVVJL12,
author = {Daniel T. Yehdego and
Boyu Zhang and
Michela Taufer and
Vikram Kumar Reddy Kodimala and
Rahulsimham Vegesna and
Sameera Viswakula and
Kyle L. Johnson and
Ming{-}Ying Leung},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Secondary structure predictions for long {RNA} sequences based on
inversion excursions: preliminary results},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {545--547},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383016},
doi = {10.1145/2382936.2383016},
timestamp = {Sat, 30 Nov 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/YehdegoZTKVVJL12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/YuZRDY12,
author = {Guo{-}Xian Yu and
Guoji Zhang and
Huzefa Rangwala and
Carlotta Domeniconi and
Zhiwen Yu},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Protein function prediction using weak-label learning},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {202--209},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382962},
doi = {10.1145/2382936.2382962},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/YuZRDY12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhangDGJZ12,
author = {Yuan Zhang and
Nan Du and
Liang Ge and
Kebin Jia and
Aidong Zhang},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {A collective {NMF} method for detecting protein functional module
from multiple data sources},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {655--660},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383053},
doi = {10.1145/2382936.2383053},
timestamp = {Wed, 16 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhangDGJZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhangGDFJZ12,
author = {Yuan Zhang and
Liang Ge and
Nan Du and
Guoqiang Fan and
Kebin Jia and
Aidong Zhang},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {A graph-based cluster ensemble method to detect protein functional
modules from multiple information sources},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {567--569},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2383023},
doi = {10.1145/2382936.2383023},
timestamp = {Wed, 16 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhangGDFJZ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhangJWK12,
author = {Wei Zhang and
Nicholas Johnson and
Baolin Wu and
Rui Kuang},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Signed network propagation for detecting differential gene expressions
and {DNA} copy number variations},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {337--344},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382979},
doi = {10.1145/2382936.2382979},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhangJWK12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhangLH12,
author = {Jintao Zhang and
Gerald H. Lushington and
Jun Huan},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {Multi-target protein-chemical interaction prediction using task-regularized
and boosted multi-task learning},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {60--67},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382944},
doi = {10.1145/2382936.2382944},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhangLH12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bcb/ZhangS12,
author = {Yuan Zhang and
Yanni Sun},
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {PseudoDomain: identification of processed pseudogenes based on protein
domain classification},
booktitle = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
pages = {178--185},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2382936.2382959},
doi = {10.1145/2382936.2382959},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/bcb/ZhangS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/bcb/2012,
editor = {Sanjay Ranka and
Tamer Kahveci and
Mona Singh},
title = {{ACM} International Conference on Bioinformatics, Computational Biology
and Biomedicine, BCB' 12, Orlando, FL, {USA} - October 08 - 10, 2012},
publisher = {{ACM}},
year = {2012},
url = {http://dl.acm.org/citation.cfm?id=2382936},
isbn = {978-1-4503-1670-5},
timestamp = {Tue, 30 Oct 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bcb/2012.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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