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BioNLP@ACL 2013: Sofia, Bulgaria
- Claire Nédellec, Robert Bossy, Jin-Dong Kim, Jung-Jae Kim, Tomoko Ohta, Sampo Pyysalo, Pierre Zweigenbaum:

Proceedings of the BioNLP Shared Task 2013 Workshop, Sofia, Bulgaria, August 9, 2013. Association for Computational Linguistics 2013, ISBN 978-1-937284-55-8 - Claire Nédellec, Robert Bossy, Jin-Dong Kim, Jung-Jae Kim, Tomoko Ohta, Sampo Pyysalo, Pierre Zweigenbaum:

Overview of BioNLP Shared Task 2013. 1-7 - Jin-Dong Kim, Yue Wang, Yasunori Yamamoto:

The Genia Event Extraction Shared Task, 2013 Edition - Overview. 8-15 - Jari Björne, Tapio Salakoski:

TEES 2.1: Automated Annotation Scheme Learning in the BioNLP 2013 Shared Task. 16-25 - Kai Hakala, Sofie Van Landeghem, Tapio Salakoski, Yves Van de Peer, Filip Ginter:

EVEX in ST'13: Application of a large-scale text mining resource to event extraction and network construction. 26-34 - Andrew MacKinlay, David Martínez, Antonio Jimeno-Yepes, Haibin Liu, W. John Wilbur, Karin Verspoor:

Extracting Biomedical Events and Modifications Using Subgraph Matching with Noisy Training Data. 35-44 - Xiao Liu, Antoine Bordes, Yves Grandvalet:

Biomedical Event Extraction by Multi-class Classification of Pairs of Text Entities. 45-49 - Jung-Jae Kim, Xu Han, Vivian Lee, Dietrich Rebholz-Schuhmann:

GRO Task: Populating the Gene Regulation Ontology with events and relations. 50-57 - Sampo Pyysalo, Tomoko Ohta, Sophia Ananiadou:

Overview of the Cancer Genetics (CG) task of BioNLP Shared Task 2013. 58-66 - Tomoko Ohta, Sampo Pyysalo, Rafal Rak, Andrew Rowley, Hong-Woo Chun, Sung-Jae Jung, Sung-Pil Choi, Sophia Ananiadou, Jun'ichi Tsujii:

Overview of the Pathway Curation (PC) task of BioNLP Shared Task 2013. 67-75 - Haibin Liu, Karin Verspoor, Donald C. Comeau, Andrew MacKinlay, W. John Wilbur:

Generalizing an Approximate Subgraph Matching-based System to Extract Events in Molecular Biology and Cancer Genetics. 76-85 - S. V. Ramanan, P. Senthil Nathan:

Performance and limitations of the linguistically motivated Cocoa/Peaberry system in a broad biological domain. 86-93 - Makoto Miwa, Sophia Ananiadou:

NaCTeM EventMine for BioNLP 2013 CG and PC tasks. 94-98 - Pontus Stenetorp, Wiktoria Golik, Thierry Hamon, Donald C. Comeau, Rezarta Islamaj Dogan, Haibin Liu, W. John Wilbur:

BioNLP Shared Task 2013: Supporting Resources. 99-103 - Quoc-Chinh Bui, David Campos, Erik M. van Mulligen, Jan A. Kors:

A fast rule-based approach for biomedical event extraction. 104-108 - Lishuang Li, Yiwen Wang, Degen Huang:

Improving Feature-Based Biomedical Event Extraction System by Integrating Argument Information. 109-115 - Gerold Schneider, Simon Clematide, Tilia Ellendorff, Don Tuggener, Fabio Rinaldi, Gintare Grigonyte:

UZH in BioNLP 2013. 116-120 - Xuan-Quang Pham, Minh Quang Le, Bao-Quoc Ho:

A Hybrid approach for biomedical event extraction. 121-124 - Roland Roller, Mark Stevenson:

Identification of Genia Events using Multiple Classifiers. 125-129 - Mai-Vu Tran, Nigel Collier, Hoang-Quynh Le, Van-Thuy Phi, Thanh-Binh Pham:

Exploring a Probabilistic Earley Parser for Event Composition in Biomedical Texts. 130-134 - Thomas Provoost, Marie-Francine Moens:

Detecting Relations in the Gene Regulation Network. 135-138 - Sondes Bannour, Laurent Audibert, Henry Soldano:

Ontology-based semantic annotation: an automatic hybrid rule-based method. 139-143 - Cyril Grouin:

Building A Contrasting Taxa Extractor for Relation Identification from Assertions: BIOlogical Taxonomy & Ontology Phrase Extraction System. 144-152 - Robert Bossy, Philippe Bessières, Claire Nédellec:

BioNLP Shared Task 2013 - An overview of the Genic Regulation Network Task. 153-160 - Robert Bossy, Wiktoria Golik, Zorana Ratkovic, Philippe Bessières, Claire Nédellec:

BioNLP shared Task 2013 - An Overview of the Bacteria Biotope Task. 161-169 - Ilknur Karadeniz, Arzucan Özgür:

Bacteria Biotope Detection, Ontology-based Normalization, and Relation Extraction using Syntactic Rules. 170-177 - Slavko Zitnik, Marinka Zitnik, Blaz Zupan, Marko Bajec:

Extracting Gene Regulation Networks Using Linear-Chain Conditional Random Fields and Rules. 178-187 - Vincent Claveau:

IRISA participation to BioNLP-ST13: lazy-learning and information retrieval for information extraction tasks. 188-196

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