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ORCID5. DILS 2008: Evry, France
- Amos Bairoch
, Sarah Cohen Boulakia, Christine Froidevaux:
Data Integration in the Life Sciences, 5th International Workshop, DILS 2008, Evry, France, June 25-27, 2008. Proceedings. Lecture Notes in Computer Science 5109, Springer 2008, ISBN 978-3-540-69827-2
Keynote Presentations
- Olivier Bodenreider:
Ontologies and Data Integration in Biomedicine: Success Stories and Challenging Issues. 1-4 - Peter D. Karp, Thomas J. Lee, Valerie Wagner:
BioWarehouse: Relational Integration of Eleven Bioinformatics Databases and Formats. 5-7 - Norman W. Paton:
Data Integration in the Life Sciences: Fun, Findings and Frustrations. 8-10
Semantic Web for the Life Sciences
- Michael Hartung, Toralf Kirsten, Erhard Rahm:
Analyzing the Evolution of Life Science Ontologies and Mappings. 11-27 - Xiaoshu Wang, Jonas S. Almeida, Arlindo L. Oliveira:
Ontology Design Principles and Normalization Techniques in the Web. 28-43 - Woei-Jyh Lee, Louiqa Raschid, Hassan Sayyadi, Padmini Srinivasan:
Exploiting Ontology Structure and Patterns of Annotation to Mine Significant Associations between Pairs of Controlled Vocabulary Terms. 44-60
Designing and Evaluating Architectures to Integrate Biological Data
- Fleur Mougin, Anita Burgun, Olivier Bodenreider, Julie Chabalier, Olivier Loréal, Pierre Le Beux:
Automatic Methods for Integrating Biomedical Data Sources in a Mediator-Based System. 61-76 - Joanna Jakubowska, Ela Hunt, John McClure, Matthew Chalmers, Martin W. McBride, Anna F. Dominiczak:
VisGenome and Ensembl: Usability of Integrated Genome Maps. 77-91 - Lucas Lochovsky, Thodoros Topaloglou:
An Entity Resolution Framework for Deduplicating Proteins. 92-107
New Architectures and Experience on Using Systems
- E. Patrick Shironoshita, Ray M. Bradley, Yves R. Jean-Mary, Thomas J. Taylor, Michael T. Ryan, Mansur R. Kabuka:
Semantic Representation and Querying of caBIG Data Services. 108-115 - Georgios Joannis Pappas Jr., Robson P. Miranda, Natália Florencio Martins, Roberto C. Togawa, Marcos M. C. Costa:
SisGen: A CORBA-Based Data Management Program for DNA Sequencing Projects. 116-123 - Frederic B. Bastian, Gilles Parmentier, Julien Roux, Sébastien Moretti, Vincent Laudet, Marc Robinson-Rechavi:
Bgee: Integrating and Comparing Heterogeneous Transcriptome Data Among Species. 124-131 - Florian Reisinger, Manuel Corpas, John M. Hancock, Henning Hermjakob, Ewan Birney, Pascal Kahlem:
ENFIN - An Integrative Structure for Systems Biology. 132-143
Systems Using Technologies from the Semantic Web for the Life Sciences
- Clément Jonquet, Mark A. Musen, Nigam Shah:
A System for Ontology-Based Annotation of Biomedical Data. 144-152 - François Belleau, Nicole Tourigny, Benjamin M. Good, Jean Morissette:
Bio2RDF : A Semantic Web Atlas of Post Genomic Knowledge about Human and Mouse. 153-160 - Amel Bouzeghoub, Abdeltif Elbyed, Fariza Tahi:
OMIE: Ontology Mapping within an Interactive and Extensible Environment. 161-168 - Mykola Konyk, Alexander De Leon Battista, Michel Dumontier:
Chemical Knowledge for the Semantic Web. 169-176
Mining Integrated Biological Data
- José A. Reyes, David R. Gilbert:
Combining One-Class Classification Models Based on Diverse Biological Data for Prediction of Protein-Protein Interactions. 177-191 - Alok Mishra, Duncan Gillies:
Semi Supervised Spectral Clustering for Regulatory Module Discovery. 192-203
New Features of Major Resources for Biomolecular Data
- Amos Bairoch:
UniProtKB/Swiss-Prot: New and Future Developments. 204-206 - Henning Hermjakob:
EBI Proteomics Services. 207
DILS 2008 Tutorial
- Olivier Dameron, Julie Chabalier:
Bio-ontologies Tutorial. 208
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