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ORCIDICBO 2014: Houston, Texas, USA
- William R. Hogan, Sivaram Arabandi, Mathias Brochhausen:
Proceedings of the 5th International Conference on Biomedical Ontology, ICBO 2014, Houston, Texas, USA, October 8-9, 2014. CEUR Workshop Proceedings 1327, CEUR-WS.org 2015 - Werner Ceusters:
Pain Assessment Terminology in the NCBO BioPortal: Evaluation and Recommendations. 1-6 - Yuki Yamagata, Kouji Kozaki, Takeshi Imai, Kazuhiko Ohe, Riichiro Mizoguchi:
Towards the Integration of Abnormality in Diseases. 7-12 - Yongqun He, Yue Liu, Bin Zhao:
OGG: a Biological Ontology for Representing Genes and Genomes in Specific Organisms. 13-20 - Mathias Brochhausen, William R. Hogan, John D. Levander, Shawn T. Brown, Nicholas Millett, Josh Hanna, Michael M. Wagner:
A Novel Representation of Terms Related to Infectious Disease Epidemiology for Epidemic Modeling: The Apollo Structured Vocabulary and Pre-existing Representations. 21-26 - Werner Ceusters, Chiun Yu Hsu, Barry Smith:
Clinical Data Wrangling using Ontological Realism and Referent Tracking. 27-32 - Guoqian Jiang, Harold R. Solbrig, Can Celik, Bedirhan Üstün, Christopher G. Chute:
Profiling ICD-11 Terminological Content Using the Common Terminology Services 2 (CTS2) Standard.
Early-career Track Paper
- Patrick Ray, Alexander P. Cox, Mark Jensen, Alexander D. Diehl:
The Ontological Treatment of Sight and Blindness. 39-42 - Karen Ross, Catalina O. Tudor, Gang Li, Ruoyao Ding, Irem Çelen, Julie Cowart, Cecilia N. Arighi, Darren A. Natale, Cathy H. Wu:
Knowledge Representation of Protein PTMs and Complexes in the Protein Ontology: Application to Multi-Faceted Disease Analysis. 43-46 - Sina Madani, Reza Alemy, Dean F. Sittig, Hua Xu:
Quality of Care Metric Reporting from Clinical Narratives: Assessing Ontology Components. 47-51 - Mark Jensen, Alexander P. Cox, Patrick Ray, Barbara E. Teter, Bianca Weinstock-Guttman, Alan Ruttenberg, Alexander D. Diehl:
An Ontological Representation and Analysis of Patient-reported and Clinical Outcomes for Multiple Sclerosis. 52-55 - Bryan Gamble, Samah J. Fodeh, Kei Cheung:
Post-Traumatic Stress Disorder (PTSD) Ontology and Use Case. 56-59 - Jonathan P. Bona, Alan Ruttenberg, Jenny Rouleau:
Representing Modification Sites in PRO. 60-63
Abstract of Scientifc Paper Subsequently Submitted to, and Appearing in, Journal
- Philippe Rocca-Serra, Ramona L. Walls, Jacob Parnell, Rachel Gallery, Jie Zheng, Susanna-Assunta Sansone, Alejandra N. González-Beltrán:
Modeling a Microbial Community and Biodiversity Assay with OBI and PCO OBO Foundry Ontologies: the Interoperability Gains of a Modular Approach. 64 - Jie Zheng, Marcelline R. Harris, Anna Maria Masci, Yu Lin, Alfred O. Hero III, Barry Smith, Yongqun He:
OBCS: The Ontology of Biological and Clinical Statistics. 65 - Guocai Chen, Jieyi Zhao, Trevor Cohen, Cui Tao, Jingchun Sun, Hua Xu, Elmer V. Bernstam, Jia Zeng, Amber M. Johnson, Vijaykumar Holla, Ann Balley, Funda Meric-Bernstam, W. Jim Zheng:
Using Ontology Fingerprints to Disambiguate Gene Name Entities in the Biomedical Literature. 66 - Cui Tao, Jingchun Sun, W. Jim Zheng, Junjie Chen, Hua Xu:
Drug Target Prediction for Colorectal Cancer by Combining Ontology and Network Approaches. 67
Poster
- Qian Zhu, Cui Tao:
Pharmacological Class Data Representation in the Web Ontology Language (OWL). 68-69 - Chen Liang, Yang Gong:
Developing a Patient Safety Ontology for Knowledge Management, Data Integration, and Decision Making. 70-72 - Allen Dearry, Cindy Lawler, Rebecca Boyles, Astrid Haugen, Huerta Michael:
Making Biomedical Data Usable: NIH Community-Based Data and Metadata Standards Efforts. 73 - Albert Goldfain, Barry Smith, Lindsay G. Cowell:
Ontological Representation of CDC Active Bacterial Core Surveillance Case Reports. 74-77 - Rachel L. Richesson, Kin Wah Fung, Olivier Bodenreider:
Coverage of Rare Disease Names in Clinical Coding Systems and Ontologies and Implications for Electronic Health Records-Based Research. 78-80 - Muhammad Amith, Cui Tao:
An Initial Framework for an Ontology-based Mobile Application for Vaccine Information Retrieval and Education. 81-83 - Yu Lin, Marcelline R. Harris, Frank J. Manion, Elizabeth Eisenhauer, Bin Zhao, Wei Shi, Alla Karnovsky, Yongqun He:
Development of a BFO-Based Informed Consent Ontology (ICO). 84-86 - Yaoyun Zhang, Jingqi Wang, Cui Tao, Hua Xu:
Ontology-based Normalization for Disease-Lab test Relation Extraction. 87-89 - Jamie P. McCusker, Rui Yan, Kusum Solanki, John S. Erickson, Cynthia Chang, Michel Dumontier, Jonathan S. Dordick, Deborah L. McGuinness:
A Nanopublication Framework for Biological Networks using Cytoscape.js. 90-92 - Zuoshuang Xiang, Yu Lin, Yongqun He:
Ontobat: An Ontology-based Semantic Web Approach for Linked Data Processing and Analysis. 93-95 - Mark Jensen, Alexander P. Cox, Jonathan P. Bona, William D. Duncan, Patrick L. Ray, Alexander D. Diehl:
Applications of OBI 'assay'. 96-98 - Suzanne L. Santamaria, Farzaneh Ashrafi, Kent A. Spackman:
Linking LOINC and SNOMED CT: A Cooperative Approach to Enhance Each Terminology and Facilitate Co-usage. 99-101
Software Demonstration Abstract
- Trish Whetzel:
SciCrunch: A Cooperative and Collaborative Data and Resource Discovery Platform for Scientific Communities. 102-103 - Michael Grove, Jeff Emch:
An Ontologic Approach to Leverage Surgical Training Data Development and Application of a CranioMaxilloFacial Ontology. 104-105 - Olivier Bodenreider, Lee B. Peters, Thang Nguyen:
RxClass - Navigating between Drug Classes and RxNorm Drugs. 106-107 - David Noren, Steven M. Kornblau, Chenyue W. Hu, Byron Long, Alex Bisberg, Raquel Norel, Gustavo Stolovitzky, Amina A. Qutub:
DREAM 9: An Acute Myeloid Leukemia Prediction Big Data Challenge. 108-109
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