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ORCIDIPDPS 2012: Shanghai, China - Workshops
- 26th IEEE International Parallel and Distributed Processing Symposium Workshops & PhD Forum, IPDPS 2012, Shanghai, China, May 21-25, 2012. IEEE Computer Society 2012, ISBN 978-1-4673-0974-5
Heterogeneity in Computing Workshop - HCW
- Behrooz A. Shirazi, Alexey L. Lastovetsky
:
HCW Introduction. 1-2 - Howard Jay Siegel:
Message from the HCW Steering Committee Chair. 3 - Behrooz A. Shirazi:
Message from the HCW General Chair. 4 - Alexey L. Lastovetsky:
Message from the HCW Program Chair. 5 - David A. Bader:
HCW 2012 Keynote Talk: Analyzing massive data using heterogeneous computing. 6
Optimization and Evaluation of Heterogeneous Platforms
- Juan Carlos Pichel, Francisco F. Rivera:
Experiences with the Sparse Matrix-Vector Multiplication on a Many-core Processor. 7-15 - Victor W. Lee, Ed Grochowski, Robert Geva:
Performance Benefits of Heterogeneous Computing in HPC Workloads. 16-26 - Abdulla Al-Qawasmeh, Sudeep Pasricha, Anthony A. Maciejewski, Howard Jay Siegel:
Thermal-Aware Performance Optimization in Power Constrained Heterogenous Data Centers. 27-40 - Jaroslaw Slawinski, Tiziano Passerini, Umberto Villa, Alessandro Veneziani, Vaidy S. Sunderam:
Experiences with Target-Platform Heterogeneity in Clouds, Grids, and On-Premises Resources. 41-52 - Xiaoyong Li, Yijie Wang, Yongquan Fu, Xiaoling Li, Weidong Sun:
BLOR: Bandwidth and Latency Sensitive Overlay Routing for Flash Data Dissemination. 53-64
Scheduling and Mapping in Heterogeneous Environments I
- Dinesh Kumar, Zon-Yin Shae, Hani Jamjoom:
Scheduling Batch and Heterogeneous Jobs with Runtime Elasticity in a Parallel Processing Environment. 65-78 - Faisal Nadeem, Imran Ashraf, Sayyed Arash Ostadzadeh, Stephan Wong, Koen Bertels:
Task Scheduling in Large-scale Distributed Systems Utilizing Partial Reconfigurable Processing Elements. 79-90 - Olivier Beaumont, Nicolas Bonichon, Ludovic Courtès, Eelco Dolstra, Xavier Hanin:
Mixed Data-Parallel Scheduling for Distributed Continuous Integration. 91-98 - Wei Zheng, Rizos Sakellariou:
A Monte-Carlo Approach for Full-Ahead Stochastic DAG Scheduling. 99-112
Algorithms and Methods for Scientific Computing on Heterogeneous Platforms
- Hartwig Anzt, Stanimire Tomov, Jack J. Dongarra, Vincent Heuveline:
A Block-Asynchronous Relaxation Method for Graphics Processing Units. 113-124 - Ashley M. DeFlumere, Alexey L. Lastovetsky, Brett A. Becker:
Partitioning for Parallel Matrix-Matrix Multiplication with Heterogeneous Processors: The Optimal Solution. 125-139 - Qiang Wu, Canqun Yang, Feng Wang, Jingling Xue:
A Fast Parallel Implementation of Molecular Dynamics with the Morse Potential on a Heterogeneous Petascale Supercomputer. 140-149
Heterogeneous Parallel and Distributed Programming
- Niels Drost, Jason Maassen, Maarten A. J. van Meersbergen, Henri E. Bal, F. Inti Pelupessy, Simon Portegies Zwart, Michael Kliphuis, Henk A. Dijkstra, Frank J. Seinstra:
High-Performance Distributed Multi-Model / Multi-Kernel Simulations: A Case-Study in Jungle Computing. 150-162 - Zeki Bozkus, Basilio B. Fraguela:
A Portable High-Productivity Approach to Program Heterogeneous Systems. 163-173 - Philipp Kegel, Michel Steuwer, Sergei Gorlatch:
dOpenCL: Towards a Uniform Programming Approach for Distributed Heterogeneous Multi-/Many-Core Systems. 174-186
Scheduling and Mapping in Heterogeneous Environments II
- I-Hsin Chung, Che-Rung Lee, Jiazheng Zhou, Chung-Yi Chou, Yeh-Ching Chung:
Scalable Communication-aware Task Mapping Algorithms for Interconnected Multicore Systems. 187-192 - Florina M. Ciorba, Timothy M. Hansen, Srishti Srivastava, Ioana Banicescu, Anthony A. Maciejewski, Howard Jay Siegel:
A Combined Dual-stage Framework for Robust Scheduling of Scientific Applications in Heterogeneous Environments with Uncertain Availability. 193-207
Reconfigurable Architectures Workshop - RAW
- Jürgen Becker, Jinian Bian, Christophe Bobda, René Cumplido, Michael Hübner:
RAW Introduction. 208-212
Physical Design of Partially Reconfigurable Architectures
- Kazutaka Ikegami, Keiko Abe, Kumiko Nomura, Shinichi Yasuda, Masato Oda, Shinobu Fujita:
Designing Nonvolatile Reconfigurable Switch-based FPGA through Overall Circuit Performance Evaluation. 213-220 - Wei Ting Loke, Yajun Ha, Wenfeng Zhao:
A Power and Cluster-Aware Technology Mapping and Clustering Scheme for Dual-VT FPGAs. 221-226 - Jonathan Antusiak, Antoine Trouvé, Kazuaki J. Murakami:
A Comparison of DAG and Mesh Topologies for Coarse-Grain Reconfigurable Array. 227-233
Network on Chip for Reconfigurable Hardware
- Jan Heisswolf, Aurang Zaib, Andreas Weichslgartner, Ralf König, Thomas Wild, Jürgen Teich, Andreas Herkersdorf, Jürgen Becker:
Hardware-assisted Decentralized Resource Management for Networks on Chip with QoS. 234-241 - Mingzhe Zhang, Liqiang He, Dongrui Fan:
Self-Correction Trace Model: A Full-System Simulator for Optical Network-on-Chip. 242-247 - George Kornaros, Dionisios N. Pnevmatikatos:
Real-Time Monitoring of Multicore SoCs through Specialized Hardware Agents on NoC Network Interfaces. 248-255
General Session 1
- Takahiro Watanabe, Minoru Watanabe:
High Speed - Low Power Optical Configuration on an ORGA with a Phase-modulation Type Holographic Memory. 256-260 - Guiyuan Jiang, Jigang Wu, Jizhou Sun:
Efficient Reconfiguration Algorithm for Three-dimensional VLSI Arrays. 261-265 - Jigang Wu, Guiyuan Jiang, Yuanrui Zhang, Yuanbo Zhu:
Algorithm for Communication Synchronization on Reconfigurable Processor Arrays with Faults. 266-270 - Aishwariya Pattabiraman, Annie Avakian, Ranga Vemuri:
A Heterogeneous Cache Distribution with Reconfigurable Interconnect. 271-276 - Jing Zhou, Zengrong Liu, Lei Chen, Shuo Wang, Zhiping Wen, Lishuai Wu, Xun Chen:
Study of an Automated Precise SEU Fault Injection Technique. 277-281 - Chao Wang, Xi Li, Peng Chen, Xiaojing Feng, Junneng Zhang, Xuehai Zhou:
Detecting Data Hazards in Multi-Processor System-on-Chips on FPGA. 282-287 - Naijin Chen, Jianhui Jiang:
Mapping Algorithm for Coarse-Grained Reconfigurable Multimedia Architectures. 288-293 - Tao Li, Zhentao Liu, Huimin Du, Lei Zhang, Jungang Han, Lin Jiang, Qingang Dong:
Reconfigurable Designs for Networking Silicon. 294-299 - Shufan Yang, Qiang Wu, Xiongren Xiao, Renfa Li, Dominic Hillenbrand:
Fair Access to External Memory for Chip-multiprocessor. 300-305 - Xinyu Niu, Kuen Hung Tsoi, Wayne Luk:
Self-Adaptive Heterogeneous Cluster with Wireless Network. 306-311
Improving Security and Computing Efficiency of Reconfigurable Systems
- Zain-ul-Abdin, Essayas Gebrewahid, Bertil Svensson:
Managing Dynamic Reconfiguration for Fault-tolerance on a Manycore Architecture. 312-319 - Thomas Schweizer, Anja Küster, Sven Eisenhardt, Tommy Kuhn, Wolfgang Rosenstiel:
Using Run-Time Reconfiguration to Implement Fault-Tolerant Coarse Grained Reconfigurable Architectures. 320-327 - Harry Sidiropoulos, Kostas Siozios, Peter Figuli, Dimitrios Soudris, Michael Hübner:
On Supporting Efficient Partial Reconfiguration with Just-In-Time Compilation. 328-335 - Marco D. Santambrogio, Fabio Cancare, Riccardo Cattaneo, S. Bhandariy, Donatella Sciuto:
An Enhanced Relocation Manager to Speedup Core Allocation in FPGA-based Reconfigurable Systems. 336-343 - Muhammad Ali Shami, Ahmed Hemani:
Classification of Massively Parallel Computer Architectures. 344-351
Applications and Special Purpose Architectures with Reconfigurable Hardware 1
- Simon A. Berger, Nikolaos Alachiotis, Alexandros Stamatakis:
An Optimized Reconfigurable System for Computing the Phylogenetic Likelihood Function on DNA Data. 352-359 - Thilan Ganegedara, Viktor K. Prasanna:
FPGA-based Router Virtualization: A Power Perspective. 360-367
Applications and Special Purpose Architectures with Reconfigurable Hardware 2
- Hsuanchun Liao, Mochamad Asri, Tsuyoshi Isshiki, Dongju Li, Hiroaki Kunieda:
A Reconfigurable High Performance ASIP Engine for Image Signal Processing. 368-375 - Manish Kumar Jaiswal, Ray C. C. Cheung:
Area-Efficient FPGA Implementation of Quadruple Precision Floating Point Multiplier. 376-382 - Zahid Ullah, Manish Kumar Jaiswal, Y. C. Chan, Ray C. C. Cheung:
FPGA Implementation of SRAM-based Ternary Content Addressable Memory. 383-389 - Pei Liu, Ahmed Hemani, Kolin Paul:
Improved Bioinformatics Processing Unit for Multiple Applications. 390-396
General Session 2
- Dominic Hillenbrand, Christian Brugger, Jie Tao, Shufan Yang, Matthias Norbert Balzer:
RIVER: Reconfigurable Pre-Synthesized-Streaming Architecture for Signal Processing on FPGAs. 397-400 - Ahmed Al-Wattar, Shawki Areibi, Fayçal Saffih:
Efficient On-line Hardware/Software Task Scheduling for Dynamic Run-time Reconfigurable Systems. 401-406 - Gilberto Ochoa, Ouassila Labbani, El-Bay Bourennane, Philippe Soulard:
Model-Driven Approach for Automatic Dynamic Partially Reconfigurable IP Customization. 407-412 - Laurent Rodriguez, Benoît Miramond, Imen Kalbousi, Bertrand Granado:
Embodied Computing: Self-adaptation in Bio-inspired Reconfigurable Architectures. 413-418 - Carsten Tradowsky, Florian Thoma, Michael Hübner, Jürgen Becker:
On Dynamic Run-time Processor Pipeline Reconfiguration. 419-424 - Weiguang Sheng, Weifeng He, Jianfei Jiang, Zhigang Mao:
Pareto Optimal Temporal Partition Methodology for Reconfigurable Architectures Based on Multi-objective Genetic Algorithm. 425-430 - Jon T. Butler, Tsutomu Sasao:
Hardware Index to Permutation Converter. 431-436 - Gianluca Durelli, Federica Cresci, Donatella Sciuto, Mario Porrmann, Marco D. Santambrogio:
Mini-Robot's Performance Optimization via Online Reconfiguration and HW/SW Task Scheduling. 437-442 - Zhongda Yuan, Yuchun Ma, Jinian Bian:
SMPP: Generic SAT Solver over Reconfigurable Hardware Accelerator. 443-448 - Ivan Shcherbakov, Christian Weis, Norbert Wehn:
A High-Performance FPGA-Based Implementation of the LZSS Compression Algorithm. 449-453
Tools for Partially Reconfigurable FPGAs
- Fabio Cancare, Davide B. Bartolini, Matteo Carminati, Donatella Sciuto, Marco D. Santambrogio:
DGECS: Description Generator for Evolved Circuits Synthesis. 454-461 - Timo Stripf, Ralf König, Patrick Rieder, Jürgen Becker:
A Compiler Back-End for Reconfigurable, Mixed-ISA Processors with Clustered Register Files. 462-469 - Christian Köllner, Francisco Mendoza, Klaus D. Müller-Glaser:
Modeling for Synthesis with System#. 470-476 - Chao Wang, Xi Li, Junneng Zhang, Peng Chen, Xiaojing Feng, Xuehai Zhou:
FPM: A Flexible Programming Model for MPSoC on FPGA. 477-484
High-Level Parallel Programming Models & Supportive Environments - HIPS
- Matthias S. Müller:
HIPS Introduction. 485-486
Case Studies
- Shreyas Ramalingam, Mary W. Hall, Chun Chen:
Improving High-Performance Sparse Libraries Using Compiler-Assisted Specialization: A PETSc Case Study. 487-496 - Nan Dun, Kenjiro Taura:
An Empirical Performance Study of Chapel Programming Language. 497-506 - Keith R. Bisset, Ashwin M. Aji, Eric J. Bohm, Laxmikant V. Kalé, Tariq Kamal, Madhav V. Marathe, Jae-Seung Yeom:
Simulating the Spread of Infectious Disease over Large Realistic Social Networks Using Charm++. 507-518
Methods
- Saurabh Joshi, R. K. Shyamasundar, Sanjeev K. Aggarwal:
A New Method of MHP Analysis for Languages with Dynamic Barriers. 519-528 - Steffen Christgau, Bettina Schnor:
Awareness of MPI Virtual Process Topologies on the Single-Chip Cloud Computer. 529-536 - Shanjiang Tang, Bu-Sung Lee, Bingsheng He:
Speedup for Multi-Level Parallel Computing. 537-546
Tools, Compilers and Libraries
- Dongmin Choi, Seung-Hun Kim, Won Woo Ro:
Conflict Avoidance Scheduling Using Grouping List for Transactional Memory. 547-556 - Munara Tolubaeva, Yonghong Yan, Barbara M. Chapman:
Compile-Time Detection of False Sharing via Loop Cost Modeling. 557-566 - Toshiya Komoda, Shinobu Miwa, Hiroshi Nakamura:
Communication Library to Overlap Computation and Communication for OpenCL Application. 567-573 - Christos Kartsaklis, Oscar R. Hernandez, Chung-Hsing Hsu, Thomas Ilsche, Wayne Joubert, Richard L. Graham:
HERCULES: A Pattern Driven Code Transformation System. 574-583
Nature Inspired Distributed Computing - NIDISC
- Pascal Bouvry, Franciszek Seredynski, El-Ghazali Talbi:
NIDISC Introduction. 584
Large-scale Distributed Systems
- Marko Obrovac, Cédric Tedeschi:
When Distributed Hash Tables Meet Chemical Programming for Autonomic Computing. 585-592 - Sergio Nesmachnow, Francisco Luna, Enrique Alba:
An Efficient Stochastic Local Search for Heterogeneous Computing Scheduling. 593-600 - Farhan Ahammed, Javid Taheri, Albert Y. Zomaya:
Using Simulated Annealing to Find Lower Bounds of Localization with Noisy Measurements. 601-608 - Marcin Seredynski, Grégoire Danoy, Pascal Bouvry:
The Necessity for Strong Reciprocators in Mobile Ad Hoc Networks. 609-616
Hybrid Metaheuristics
- Slami Saadi, Abderrezak Guessoum, Maamar Bettayeb:
A Novel Approach for Regularized Signal Deconvolution Based on Hybrid Swarm Intelligence: Application to Neutron Radiography. 617-624 - Khedidja Seridi, Laetitia Jourdan, El-Ghazali Talbi:
Parallel Hybrid Metaheuristic for Multi-objective Biclustering in Microarray Data. 625-633 - Amir Nakib, Boubaker Daachi, Patrick Siarry:
Hybrid Differential Evolution Using Low-Discrepancy Sequences for Image Segmentation. 634-640
Metaheuristics Parallelization and Application
- Jan Mendonca Correa, Alba Cristina Magalhaes Alves de Melo, Ricardo P. Jacobi, Azzedine Boukerche:
Parallel Simulated Annealing for Fragment Based Sequence Alignment. 641-648 - Anna Piwonska, Franciszek Seredynski, Miroslaw Szaban:
Discovering Cellular Automata Rules for Binary Classification Problem with Use of Genetic Algorithm. 649-655 - Gabriel Luque, Francisco Luna, Enrique Alba:
Enhanced Parallel Cooperative Model for Trajectory Based Metaheuristics: A Scalability Analysis. 656-660
High Performance Computational Biology - HiCOMB
- Mark J. Clement, Quinn Snell, Srinivas Aluru, David A. Bader:
HiCOMB Introduction. 663-664
Next-Generation Data Analysis
- Wendi Wang, Wen Tang, Linchuan Li, Guangming Tan, Peiheng Zhang, Ninghui Sun:
Investigating Memory Optimization of Hash-index for Next Generation Sequencing on Multi-core Architecture. 665-674 - Nathan L. Clement, Brent A. Shepherd, Paul M. Bodily, Sukhbat Tumur-Ochir, Younghoon Gim, Quinn Snell, Mark J. Clement, W. Evan Johnson:
Parallel Pair-HMM SNP Detection. 675-683 - Yongchao Liu, Bertil Schmidt:
Evaluation of GPU-based Seed Generation for Computational Genomics Using Burrows-Wheeler Transform. 684-690
Analysis of Evolution
- Jiajie Zhang, Alexandros Stamatakis:
The Multi-Processor Scheduling Problem in Phylogenetics. 691-698 - Raquel Dias, César A. F. De Rose, Antônio Tadeu A. Gomes, Nelson J. R. Fagundes:
Optimizing the Execution of Statistical Simulations for Human Evolution in Hyper-threaded Multicore Architectures. 699-705 - Hannes Schabauer, Mario Valle, Christoph Pacher, Heinz Stockinger, Alexandros Stamatakis, Marc Robinson-Rechavi, Ziheng Yang, Nicolas Salamin:
SlimCodeML: An Optimized Version of CodeML for the Branch-Site Model. 706-714
Sequence and Structure
- Steven T. Stewart, Eric Aubanel, Patricia A. Evans:
Finding Common RNA Secondary Structures: A Case Study on the Dynamic Parallelization of a Data-driven Recurrence. 715-724 - Kathryn Dempsey, Kanimathi Duraisamy, Sanjukta Bhowmick, Hesham H. Ali:
The Development of Parallel Adaptive Sampling Algorithms for Analyzing Biological Networks. 725-734
GPU Approaches
- Xiaoqiang Li, Wenting Han, Gu Liu, Hong An, Mu Xu, Wei Zhou, Qi Li:
A Speculative HMMER Search Implementation on GPU. 735-741 - Mo Xu, Xiaorui Zhang, Yu Wang, Ling Ren, Ziyu Wen, Yi Xu, Gaolang Gong, Ningyi Xu, Huazhong Yang:
Probabilistic Brain Fiber Tractography on GPUs. 742-751 - Peter E. Bailey, Tapasya Patki, Gregory M. Striemer, Ali Akoglu, David K. Lowenthal, Peter Bradbury, Matt Vaughn, Liya Wang, Stephen Goff:
Quantitative Trait Locus Analysis Using a Partitioned Linear Model on a GPU Cluster. 752-760
Advances in Parallel and Distributed Computing Models - APDCM
- Oscar H. Ibarra:
APDCM Introduction. 761
Programming Models
- Jens Breitbart:
Dataflow-like Synchronization in a PGAS Programming Model. 762-769 - Marko Obrovac, Cédric Tedeschi:
On the Feasibility of a Distributed Runtime for the Chemical Programming Model. 770-777 - Martti Forsell, Mikko Hiivala:
Multi-core Portability Abstraction. 778-785 - Martti Forsell, Ville Leppänen:
An Extended PRAM-NUMA Model of Computation for TCF Programming. 786-793
Parallel Architectures and GPUs
- Koji Nakano:
Simple Memory Machine Models for GPUs. 794-803 - Amlan Chatterjee, Sridhar Radhakrishnan, John K. Antonio:
Counting Problems on Graphs: GPU Storage and Parallel Computing Techniques. 804-812 - Ramachandran Vaidyanathan, Phaneendra Vinukonda:
On Running Windowed Image Computations on a Pipeline. 813-820 - Shigeyuki Takano:
Very Large-Scale Integrated Processor. 821-828
Wireless Networks
- Keqin Li:
Optimal Number of Annuli for Maximizing the Lifetime of Sensor Networks. 829-838 - Thamer Alsulaiman, Sushil K. Prasad, Alexander Zelikovsky:
Distributed Algorithms for TDMA Link Scheduling in Sensor Networks. 839-847 - Thiago F. Neves, Marcos F. Caetano, Jacir Luiz Bordim:
An Energy-Optimum and Communication-Time Efficient Protocol for Allocation, Scheduling and Routing in Wireless Networks. 848-854 - Felipe M. Modesto, Marcos F. Caetano, Jacir Luiz Bordim:
An Opportunistic MAC Protocol Based on Statistical Spectrum Analysis. 855-862
Parallel and Distributed Algorithms
- Joel Antonio Trejo-Sánchez, José Alberto Fernández-Zepeda:
A Self-stabilizing Algorithm for the Maximal 2-packing in a Cactus Graph. 863-871 - Yusuke Hosaka, Yukiko Yamauchi, Shuji Kijima, Hirotaka Ono, Masafumi Yamashita:
An Extension of Matthews' Bound to Multiplex Random Walks. 872-877 - Marin Bougeret, Pierre-François Dutot, Klaus Jansen, Christina Robenek, Denis Trystram:
Tight Approximation for Scheduling Parallel Jobs on Identical Clusters. 878-885 - Yang Wang, Xiaojun Cao, Adrian Caciula, Qian Hu:
On-line Batch Scheduling in Distributed Optical Networks. 886-893
Communication Architecture for Scalable Systems - CASS
- José Flich, Scott Pakin, Craig B. Stunkel:
CASS Introduction. 894-895