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ORCID12th ISMB / 3rd ECCB 2004: Glasgow, Scotland, UK (Supplement of Bioinformatics)
- Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, Glasgow, UK, July 31-August 4, 2004. 2004
- Janet M. Thornton, David R. Gilbert, Catherine Brooksbank
:
ISMB/ECCB 2004. 1-2 - Janet M. Thornton, David R. Gilbert, Catherine Brooksbank:
ISMB/ECCB 2004 Organization. 3-5 - Kiyoko F. Aoki, Nobuhisa Ueda, Atsuko Yamaguchi, Minoru Kanehisa, Tatsuya Akutsu, Hiroshi Mamitsuka:
Application of a new probabilistic model for recognizing complex patterns in glycans. 6-14 - Chitta Baral, Karen Chancellor, Tran Hoai Nam, Nhan Tran, Anna M. Joy, Michael E. Berens:
A knowledge based approach for representing and reasoning about signaling networks. 15-22 - Ziv Bar-Joseph, Shlomit Farkash, David K. Gifford, Itamar Simon, Roni Rosenfeld:
Deconvolving cell cycle expression data with complementary information. 23-30 - Gill Bejerano, David Haussler, Mathieu Blanchette:
Into the heart of darkness: large-scale clustering of human non-coding DNA. 40-48 - Marshall W. Bern, David Goldberg, W. Hayes McDonald, John R. Yates III:
Automatic Quality Assessment of Peptide Tandem Mass Spectra. 49-54 - Doron Betel, Ruth Isserlin-Weinberger, Christopher W. V. Hogue:
Analysis of domain correlations in yeast protein complexes. 55-62 - Emidio Capriotti, Piero Fariselli, Rita Casadio:
A neural-network-based method for predicting protein stability changes upon single point mutations. 63-68 - Robert Castelo, Roderic Guigó:
Splice site identification by idlBNs. 69-76 - Shann-Ching Chen, Ivet Bahar:
Mining frequent patterns in protein structures: a study of protease families. 77-85 - Sarah Cohen Boulakia, Séverine Lair, Nicolas Stransky, Stéphane Graziani, François Radvanyi, Emmanuel Barillot, Christine Froidevaux:
Selecting biomedical data sources according to user preferences. 86-93 - Lachlan James M. Coin, Richard Durbin:
Improved techniques for the identification of pseudogenes. 94-100 - Michiel J. L. de Hoon, Yuko Makita, Seiya Imoto, Kazuo Kobayashi, Naotake Ogasawara, Kenta Nakai, Satoru Miyano:
Predicting gene regulation by sigma factors in Bacillus subtilis from genome-wide data. 101-108 - Christoph Dieterich, Sven Rahmann, Martin Vingron:
Functional inference from non-random distributions of conserved predicted transcription factor binding sites. 109-115 - Hernán Dopazo, Javier Santoyo, Joaquín Dopazo:
Phylogenomics and the number of characters required for obtaining an accurate phylogeny of eukaryote model species. 116-121 - Angela Enosh, Sarel Jacob Fleishman, Nir Ben-Tal, Dan Halperin:
Assigning transmembrane segments to helices in intermediate-resolution structures. 122-129 - Richard A. George, Ruth V. Spriggs, Janet M. Thornton, Bissan Al-Lazikani, Mark B. Swindells:
SCOPEC: a database of protein catalytic domains. 130-136 - Gideon Greenspan, Dan Geiger:
High density linkage disequilibrium mapping using models of haplotype block variation. 137-144 - Cigdem Gunduz, Bülent Yener, S. Humayun Gultekin:
The cell graphs of cancer. 145-151 - Naohiko Heida, Yoshikazu Hasegawa, Yoshiki Mochizuki, Katsura Hirosawa, Akihiko Konagaya, Tetsuro Toyoda:
TraitMap: an XML-based genetic-map database combining multigenic loci and biomolecular networks. 152-160 - Vladimir Jojic, Nebojsa Jojic, Christopher Meek, Dan Geiger, Adam C. Siepel, David Haussler, David Heckerman:
Efficient approximations for learning phylogenetic HMM models from data. 161-168 - Cliff A. Joslyn, Susan M. Mniszewski, Andy W. Fulmer, Gary Heaton:
The Gene Ontology Categorizer. 169-177 - Peter V. Kharchenko, Dennis Vitkup, George M. Church:
Filling gaps in a metabolic network using expression information. 178-185 - Gunnar W. Klau, Sven Rahmann, Alexander Schliep, Martin Vingron, Knut Reinert:
Optimal robust non-unique probe selection using Integer Linear Programming. 186-193 - Dennis Kostka, Rainer Spang:
Finding disease specific alterations in the co-expression of genes. 194-199 - Mehmet Koyutürk, Ananth Grama, Wojciech Szpankowski:
An efficient algorithm for detecting frequent subgraphs in biological networks. 200-207 - Hongzhe Li, Jiang Gui:
Partial Cox regression analysis for high-dimensional microarray gene expression data. 208-215 - Gerton Lunter, Jotun Hein:
A nucleotide substitution model with nearest-neighbour interactions. 216-223 - Robert M. MacCallum:
Striped sheets and protein contact prediction. 224-231 - Manuel Middendorf, Anshul Kundaje, Chris Wiggins, Yoav Freund, Christina S. Leslie:
Predicting genetic regulatory response using classification. 232-240 - Sven Mika, Burkhard Rost:
Protein names precisely peeled off free text. 241-247 - Iftach Nachman, Aviv Regev, Nir Friedman:
Inferring quantitative models of regulatory networks from expression data. 248-256 - Stephen A. Racunas, N. H. Shah, István Albert, Nina V. Fedoroff:
HyBrow: a prototype system for computer-aided hypothesis evaluation. 257-264 - Benjamin J. Raphael, Pavel A. Pevzner:
Reconstructing tumor amplisomes. 265-273 - David J. Reiss, Benno Schwikowski:
Predicting protein-peptide interactions via a network-based motif sampler. 274-282 - Alexander Schliep, Christine Steinhoff, Alexander Schönhuth:
Robust inference of groups in gene expression time-courses using mixtures of HMMs. 283-289 - Padmini Srinivasan, Bisharah Libbus:
Mining MEDLINE for implicit links between dietary substances and diseases. 290-296 - Kellathur N. Srinivasan, Guanglan Zhang, Asif M. Khan, J. Thomas August, Vladimir Brusic:
Prediction of class I T-cell epitopes: evidence of presence of immunological hot spots inside antigens. 297-302 - Robert D. Stevens, Hannah J. Tipney, Chris Wroe, Thomas M. Oinn, Martin Senger, Phillip W. Lord, Carole A. Goble, Andy Brass, M. Tassabehji:
Exploring Williams-Beuren syndrome using myGrid. 303-310 - Radek Szklarczyk, Jaap Heringa:
Tracking repeats using significance and transitivity. 311-317 - Phil Trinh, Aoife McLysaght, David Sankoff:
Genomic features in the breakpoint regions between syntenic blocks. 318-325 - Koji Tsuda, William Stafford Noble:
Learning kernels from biological networks by maximizing entropy. 326-333 - Zasha Weinberg, Walter L. Ruzzo:
Exploiting conserved structure for faster annotation of non-coding RNAs without loss of accuracy. 334-341 - Daniela Wieser, Ernst Kretschmann, Rolf Apweiler:
Filtering erroneous protein annotation. 342-347 - M. D. Woodhams, Michael D. Hendy:
Reconstructing phylogeny by Quadratically Approximated Maximum Likelihood. 348-354 - Weijia Xu, Willard J. Briggs, Joanna Padolina, Ruth E. Timme, Wenguo Liu, C. Randal Linder, Daniel P. Miranker:
Using MoBIoS' scalable genome join to find conserved primer pair candidates between two genomes. 355-362 - Yoshihiro Yamanishi, Jean-Philippe Vert, Minoru Kanehisa:
Protein network inference from multiple genomic data: a supervised approach. 363-370 - Changhui Yan, Drena Dobbs, Vasant G. Honavar:
A two-stage classifier for identification of protein-protein interface residues. 371-378 - Mehdi Yousfi Monod, Véronique Giudicelli, Denys Chaume, Marie-Paule Lefranc:
IMGT/JunctionAnalysis: the first tool for the analysis of the immunoglobulin and T cell receptor complex V-J and V-D-J JUNCTIONs. 379-385 - Mohammed Javeed Zaki, Vinay Nadimpally, Deb Bardhan, Chris Bystroff:
Predicting protein folding pathways. 386-393
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