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ORCIDPACBB 2011: Salamanca, Spain
- Miguel P. Rocha, Juan M. Corchado Rodríguez, Florentino Fdez-Riverola
, Alfonso Valencia:
5th International Conference on Practical Applications of Computational Biology & Bioinformatics, PACBB 2011, April 6-8, 2011, Salamanca, Spain. Advances in Intelligent and Soft Computing 93, Springer 2011, ISBN 978-3-642-19913-4 - Sergio Torres-Sánchez, Rosana Montes-Soldado, Nuria Medina-Medina, Andrés R. Masegosa, María del Mar Abad-Grau:
Riskoweb: Web-Based Genetic Profiling to Complex Disease Using Genome-Wide SNP Markers. 1-8 - Francisco José Esteban, David Díaz, Pilar Hernández, Juan Antonio Caballero, Gabriel Dorado, Sergio Gálvez:
MC64: A Web Platform to Test Bioinformatics Algorithms in a Many-Core Architecture. 9-16 - Eliana Sousa, Tiago Jesus, Lina Neves, Mónica Isabel Teixeira da Costa, Fernando Reinaldo Ribeiro, José Carlos Metrôlho, Ricardo Cruz-Correia:
Integrating Medical Patient Data with Family Trees to Improve the Quality of Information. 17-22 - Lionel Morgado, Carlos Pereira, Paula Veríssimo, António Dourado:
Peptidase Detection and Classification Using Enhanced Kernel Methods with Feature Selection. 23-30 - Andreia Teixeira-Castro, Nuno Dias, Pedro Miguel Rodrigues, João Filipe Oliveira, Nuno F. Rodrigues, Patrícia Maciel, João L. Vilaça:
An Image Processing Application for Quantification of Protein Aggregates in Caenorhabditis Elegans. 31-38 - Jorge Álvarez, Roberto Blanco, Elvira Mayordomo:
Workflows with Model Selection: A Multilocus Approach to Phylogenetic Analysis. 39-47 - Ricardo Santos Aires, João A. Carriço, Alexandre P. Francisco, Sara C. Madeira:
Baiacu: A Tool for the Visual Analysis of the Saccharomyces Cerevisiae Regulatory Network. 49-56 - Márcio S. Carocho, Sérgio A. D. Deusdado:
BBMS++ - Basic Bioinformatics Meta-searcher. 57-62 - Ginés D. Guerrero, Horacio Emilio Pérez Sánchez, Wolfgang Wenzel, José M. Cecilia, José M. García:
Effective Parallelization of Non-bonded Interactions Kernel for Virtual Screening on GPUs. 63-69 - David N. Olivieri, Iván Gómez-Conde, José Faro:
Tracking B Cells from Two-Photon Microscopy Images Using Sequential Monte Carlo. 71-78 - Tânia Teixeira, Sérgio A. D. Deusdado:
Experiments on Computer Assisted Optimization of the EscherichiaColi Fermentation Process Using Optferm. 79-82 - Daniel Glez-Peña, Miguel Reboiro-Jato, Florentino Fdez-Riverola, David G. Pisano, Gonzalo Gómez-López:
An Intuitive Workflow to Retrieve Somatic Mutations in Next Generation Sequencing Studies. 83-86 - Daniel Glez-Peña, Osvaldo Graña, Florentino Fdez-Riverola, David G. Pisano:
Building a GATK-Based Tool for Methylation Analysis in Next-Generation Bisulfite Sequencing Experiments. 87-91 - M. Márquez-Cid, G. Comesaña, R. Milne, G. Andrés, Núria Malats, David G. Pisano:
EPIQuest: A Multiuser and Multiproject Web Tool to Build Online Forms for Biomedical Studies. 93-98 - Miguel Reboiro-Jato, Daniel Glez-Peña, José Ramón Méndez Reboredo, Hugo Miguel Santos, Ricardo Jorge Carreira, José L. Capelo, Florentino Fdez-Riverola:
Building Proteomics Applications with the AIBench Application Framework. 99-107 - Marina Beltrán-Blanco, Javier Molina-Vilaplana, José Luis Muñoz-Lozano, Juan López Coronado:
Neurohand Solving the Inverse Cinematic of an Anthropomorphic Arm. 109-115 - Angélica González, Marco A. Ameller F.:
An Enhancement of the Usage of the Poincare Index for the Detection and Classification of Characteristic Points in Dactylograms. 117-124 - Nabila Kazmi, M. Alamgir Hossain, Roger M. Phillips:
Modelling of Tirapazamine Effects on Solid Tumour Morphology. 125-132 - S. Algoul, Mohammad S. Alam, Kazi Sakib, M. Alamgir Hossain, M. A. A. Majumder:
MOGA-Based Multi-drug Optimisation for Cancer Chemotherapy. 133-140 - Saleh Enbiya, M. Alamgir Hossain, Fatima Mahieddine:
Multi-drug Infusion Control Using Model Reference Adaptive Algorithm. 141-148 - John Healy, Desmond Chambers:
Fast and Accurate Genome Anchoring Using Fuzzy Hash Maps. 149-156 - Fernando José Mateus da Silva, Juan Manuel Sánchez-Pérez, Juan Antonio Gómez Pulido, Miguel A. Vega-Rodríguez:
A Parallel Niched Pareto Evolutionary Algorithm for Multiple Sequence Alignment. 157-165 - José Ignacio Requeno, Roberto Blanco, Gregorio de Miguel Casado, José Manuel Colom:
Phylogenetic Analysis Using an SMV Tool. 167-174 - Tarek El Falah, Thierry Lecroq, Mourad Elloumi:
An Efficient Motif Search Algorithm Based on a Minimal Forbidden Patterns Approach. 175-182 - Francisco M. Ortuño Guzman, Ignacio Rojas, Héctor Pomares, José M. Urquiza, J. P. Florido:
Emerging Methodologies in Multiple Sequence Alignment Using High Throughput Data. 183-190 - Heri Ramampiaro, Aleksander Grande:
DNA Sequence Search Using Content-Based Image Search Approach. 191-199 - Josep Bau, Marta Cullell, Jordi Solé-Casals:
Integrative Analysis of the Regulatory Region of the FGFR3 Oncogene. 201-204 - Carlos A. C. Bastos, Vera Afreixo, Armando J. Pinho, Sara P. Garcia, João M. O. S. Rodrigues, Paulo Jorge S. G. Ferreira:
Distances between Dinucleotides in the Human Genome. 205-211 - Diogo Pratas, Armando J. Pinho:
Compressing the Human Genome Using Exclusively Markov Models. 213-220 - Víctor Andrés Vera Ruiz, Liliana López Kleine:
Highlighting Differential Gene Expression between Two Condition Microarrays through Multidimensional Scaling Comparison of LesihmaniaInfantum Genomic Data Similarity Matrices. 221-228 - André Valério Carreiro, Orlando Anunciação, João A. Carriço, Sara C. Madeira:
Biclustering-Based Classification of Clinical Expression Time Series: A Case Study in Patients with Multiple Sclerosis. 229-239 - Antonio Carvajal-Rodríguez, Jacobo de Uña-Álvarez:
A Simulation Study on the Impact of Strong Dependence in High-Dimensional Multiple-Testing I: The Case without Effects. 241-246 - Rita M. T. Ascenso:
Bioinformatics as a Tool to Help Characterise Perkinsus Olseni Up-Regulated Genes in Response to Its Host. 247-253 - Raul Malutan, Pedro Gómez-Vilda, Ioana Berindan Neagoe, Monica Borda:
Hybridization Dynamics Compensation in Microarray Experiments. 255-261 - Natalia Novoselova, Frank Klawonn, Thorsten Johl, Tobias Reinl, Lothar Jänsch:
Identification of Peptides with Deviating Regulation Factors Using a Robust Clustering Scheme. 263-270 - Gualberto Asencio-Cortés, Jesús S. Aguilar-Ruiz, Alfonso E. Márquez Chamorro:
Prediction of Protein Distance Maps by Assembling Fragments According to Physicochemical Similarities. 271-277 - Alfonso E. Márquez Chamorro, Federico Divina, Jesús S. Aguilar-Ruiz, Gualberto Asencio-Cortés:
Residue-Residue Contact Prediction Based on Evolutionary Computation. 279-283 - Md. Saiful Islam, Alaol Kabir, Kazi Sakib, M. Alamgir Hossain:
NcPred for Accurate Nuclear Protein Prediction Using n-mer Statistics with Various Classification Algorithms. 285-292 - Beatriz Luna, Claudine Chaouiya:
Relating Formalisms for the Qualitative Modelling of Regulatory Networks. 293-302 - Anália Lourenço, Sónia Carneiro, José P. Pinto, Miguel Rocha, Eugénio C. Ferreira, Isabel Rocha:
Interpreting the Regulatory Interplay in E. coli Metabolic Pathways. 303-312 - Sónia Carneiro, Eugénio C. Ferreira, Isabel Rocha:
A Systematic Modeling Approach to Elucidate the Triggering of the Stringent Response in Recombinant E. coli Systems. 313-320 - Diana Hermith, Carlos Olarte, Camilo Rueda, Frank D. Valencia:
Modeling Cellular Signaling Systems: An Abstraction-Refinement Approach. 321-328 - Paulo Vilaça, Paulo Maia, Miguel Rocha:
A Study on the Robustness of Strain Optimization Algorithms. 329-336 - Rosalía Laza, Reyes Pavón, Miguel Reboiro-Jato, Florentino Fdez-Riverola:
Assessing the Suitability of MeSH Ontology for Classifying Medline Documents. 337-344 - Reyes Pavón, Rosalía Laza, Miguel Reboiro-Jato, Florentino Fdez-Riverola:
Assessing the Impact of Class-Imbalanced Data for Classifying Relevant/Irrelevant Medline Documents. 345-353 - Rui Camacho, Max Pereira, Vítor Santos Costa, Nuno A. Fonseca, Carlos J. V. Simões, Rui M. M. Brito:
Assessing the Effect of 2D Fingerprint Filtering on ILP-Based Structure-Activity Relationships Toxicity Studies in Drug Design. 355-363 - Rubén Romero, Eva Lorenzo Iglesias, Lourdes Borrajo, Carmen M. Redondo Marey:
Using Dictionaries for Biomedical Text Classification. 365-372 - José M. Urquiza, Ignacio Rojas, Héctor Pomares, Luis Javier Herrera, J. P. Florido, Francisco M. Ortuño Guzman:
Using Machine Learning Techniques and Genomic/Proteomic Information from Known Databases for PPI Prediction. 373-380 - Sérgio Matos, José Luís Oliveira:
Prioritizing Literature Search Results Using a Training Set of Classified Documents. 381-388 - José Javier Moreno-Ortega, Nuria Medina-Medina, Rosana Montes-Soldado, María del Mar Abad-Grau:
Improving Reproducibility on Tree Based Multimarker Methods: TreeDTh. 389-396
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