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PACBB 2016: Sevilla, Spain
- Mohd Saberi Mohamad

, Miguel P. Rocha
, Florentino Fdez-Riverola
, Francisco José Domínguez Mayo, Juan F. De Paz
:
10th International Conference on Practical Applications of Computational Biology & Bioinformatics, PACBB 2016, Sevilla, Spain, 1-3 June 2016. Advances in Intelligent Systems and Computing 477, Springer 2016, ISBN 978-3-319-40125-6
Data and Text Mining
- Fiorella Cravero

, María Jimena Martínez
, Gustavo E. Vazquez
, Mónica Fátima Díaz
, Ignacio Ponzoni
:
Intelligent Systems for Predictive Modelling in Cheminformatics: QSPR Models for Material Design Using Machine Learning and Visual Analytics Tools. 3-11 - Javier Pérez-Sianes, Horacio Pérez Sánchez

, Fernando Díaz:
Virtual Screening: A Challenge for Deep Learning. 13-22 - Sorayya Malek, R. Gunalan, S. Y. Kedija, Chia Fong Lau, Mogeeb A. A. Mosleh

, Pozi Milow, H. Amber, A. Saw:
A Primary Study on Application of Artificial Neural Network in Classification of Pediatric Fracture Healing Time of the Lower Limb. 23-30 - Martha Ivón Cárdenas, Alfredo Vellido, Jesús Giraldo:

Visual Exploratory Assessment of Class C GPCR Extracellular Domains Discrimination Capabilities. 31-39 - Rúben Rodrigues

, Hugo Costa, Miguel Rocha
:
Development of a Machine Learning Framework for Biomedical Text Mining. 41-49 - Susheel Sagar, Julia Sidorova

:
Sequence Retriever for Known, Discovered, and User-Specified Molecular Fragments. 51-58
Gene Expression
- Joanna Zyla

, Michal Marczyk
, Joanna Polanska
:
Sensitivity, Specificity and Prioritization of Gene Set Analysis When Applying Different Ranking Metrics. 61-69 - Wojciech Labaj, Anna Papiez

, Joanna Polanska
, Andrzej Polanski
:
Deep Data Analysis of a Large Microarray Collection for Leukemia Biomarker Identification. 71-79 - Reham Mohamed

, Nagia M. Ghanem, Mohamed A. Ismail:
Cancer Detection Using Co-Training of SNP/Gene/MiRNA Expressions Classifiers. 81-89 - Henry Yang:

Systematic Evaluation of Gene Expression Data Analysis Methods Using Benchmark Data. 91-98 - José A. Castellanos-Garzón, Juan Ramos, Alfonso González-Briones

, Juan Francisco de Paz
:
A Clustering-Based Method for Gene Selection to Classify Tissue Samples in Lung Cancer. 99-107 - Laura Do Souto, Alfonso González-Briones

, Andreia J. Amaral, Margarida Gama-Carvalho
, Juan Francisco de Paz
:
Large-Scale Transcriptomic Approaches for Characterization of Post-Transcriptional Control of Gene Expression. 109-119
Genomics
- John Healy:

FLAK: Ultra-Fast Fuzzy Whole Genome Alignment. 123-131 - Zhenya Li, Richard O. Sinnott

, Yee Wen Choon, Muhammad Farhan Sjaugi
, Mohd Saberi Mohamad, Safaai Deris, Suhaimi Napis, Sigeru Omatu, Juan Manuel Corchado
, Zuwairie Ibrahim
, Zulkifli Md. Yusof:
Exploring the High Performance Computing-Enablement of a Suite of Gene-Knockout Based Genetic Engineering Applications. 133-139 - Miriam Rubio-Camarillo, Hugo López-Fernández

, Gonzalo Gómez-López, Angel Carro, José María Fernández
, Florentino Fdez-Riverola
, Daniel Glez-Peña
, David G. Pisano:
RUbioSeq+: An Application that Executes Parallelized Pipelines to Analyse Next-Generation Sequencing Data. 141-149 - Vera Afreixo

, João M. O. S. Rodrigues
, Carlos A. C. Bastos
, Raquel M. Silva
:
Exceptional Symmetry Profile: A Genomic Word Analysis. 151-159 - Sophia Santos

, Isabel Rocha
:
A Computation Tool for the Estimation of Biomass Composition from Genomic and Transcriptomic Information. 161-169
Systems Biology
- Gustavo Santos-García

, Carolyn L. Talcott, Adrián Riesco
, Beatriz Santos-Buitrago, Javier De Las Rivas
:
Role of Nerve Growth Factor Signaling in Cancer Cell Proliferation and Survival Using a Reachability Analysis Approach. 173-181 - Nor Syahirah Abdul Wahid, Mohd Saberi Mohamad

, Abdul Hakim Mohamed Salleh, Safaai Deris, Weng Howe Chan
, Sigeru Omatu, Juan Manuel Corchado
, Muhammad Farhan Sjaugi
, Zuwairie Ibrahim
, Zulkifli Md. Yusof:
A Hybrid of Harmony Search and Minimization of Metabolic Adjustment for Optimization of Succinic Acid Production. 183-191 - Vítor Vieira

, Paulo Maia
, Isabel Rocha
, Miguel Rocha
:
Development of an Integrated Framework for Minimal Cut Set Enumeration in Constraint-Based Models. 193-201 - Giorgos Athineou, Giorgos Papoutsoglou

, Sofia Triantafillou, Ioannis Basdekis, Vincenzo Lagani, Ioannis Tsamardinos:
SCENERY: A Web-Based Application for Network Reconstruction and Visualization of Cytometry Data. 203-211 - Jorge Ferreira, Sara Correia, Miguel Rocha

:
Reconstruction of Metabolic Models for Liver Cancer Cells. 213-221

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