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Computational Biology and Chemistry, Volume 85
Volume 85, April 2020
- Rui Wang, Yanhao Cheng, Xiaojuan Ke, Xiaofan Zhang, Hongsheng Zhang, Ji Huang:
Comparative analysis of salt responsive gene regulatory networks in rice and Arabidopsis. 107188 - Flávia Camila Vieira da Silva, Evenilton Pessoa Costa, Valdirene Moreira Gomes, André de Oliveira Carvalho:
Inhibition mechanism of human salivary α-amylase by lipid transfer protein from Vigna unguiculata. 107193 - Xuedong Wang, Wenhui Shang, Xiaoqin Li, Yu Chang:
Methylation signature genes identification of cancers occurrence and pattern recognition. 107198 - Su Zhou, Shulin Wang, Qi Wu, Riasat Azim, Wen Li:
Predicting potential miRNA-disease associations by combining gradient boosting decision tree with logistic regression. 107200 - Roshan Ali, Yuannian Jiao, P. Kerr Wall, Simon G. Patching, Irshad Ahmad, Ghosia Lutfullah, Claude W. dePamphilis:
In silico identification and structure function analysis of a putative coclaurine N-methyltransferase from Aristolochia fimbriata. 107201 - Yichen Sun, Hongqian Zhao, Min Wu, Junhua Xu, Shanshan Zhu, Jie Gao:
Identifying critical states of hepatocellular carcinoma based on landscape dynamic network biomarkers. 107202 - Hanna V. Dudko, Viktar A. Urban, Alexander I. Davidovskii, Valery G. Veresov:
Structure-based modeling of turnover of Bcl-2 family proteins bound to voltage-dependent anion channel 2 (VDAC2): Implications for the mechanisms of proapoptotic activation of Bak and Bax in vivo. 107203 - Elliasu Y. Salifu, Clement Agoni, Fisayo A. Olotu, Mahmoud E. S. Soliman:
Triple Mycobacterial ATP-synthase mutations impedes Bedaquiline binding: Atomistic and structural perspectives. 107204 - Vivitri Dewi Prasasty, Sandra Cindana, Fransiskus Xaverius Ivan, Hilyatuz Zahroh, Ernawati Sinaga:
Structure-based discovery of novel inhibitors of Mycobacterium tuberculosis CYP121 from Indonesian natural products. 107205 - Angana Chakraborty, Sanghamitra Bandyopadhyay:
conLSH: Context based Locality Sensitive Hashing for mapping of noisy SMRT reads. 107206 - Taiju Yamada:
7bgzf: Replacing samtools bgzip deflation for archiving and real-time compression. 107207 - Debangana Chakravorty, Abhirupa Ghosh, Sudipto Saha:
Computational approach to target USP28 for regulating Myc. 107208 - Zahra Yazdani, Alireza Rafiei, Reza Valadan, Hossein Ashrafi, MarziehSharifi Pasandi, Mostafa Kardan:
Designing a potent L1 protein-based HPV peptide vaccine: A bioinformatics approach. 107209 - Devina Ghai, Anshu Alok, Himani, S. K. Upadhyay, Jaspreet K. Sembi:
Genome wide characterization of the SERK/SERL gene family in Phalaenopsis equestris, Dendrobium catenatum and Apostasia shenzhenica (Orchidaceae). 107210 - Karen J. Gonzalez, Diego M. Moncada-Giraldo, Juan B. Gutierrez:
In silico identification of potential inhibitors against human 2'-5'- oligoadenylate synthetase (OAS) proteins. 107211 - Mallu Govardhana, Belur Satyan Kumudini:
In-silico analysis of cucumber (Cucumis sativus L.) Genome for WRKY transcription factors and cis-acting elements. 107212 - Larysa Metelytsia, Diana M. Hodyna, Inga Dobrodub, Ivan Semenyuta, Mikhail Zavhorodnii, Volodymyr Blagodatnyi, Vasyl V. Kovalishyn, Oleksandr Brazhko:
Design of (quinolin-4-ylthio)carboxylic acids as new Escherichia coli DNA gyrase B inhibitors: machine learning studies, molecular docking, synthesis and biological testing. 107224 - Naiqiang Zhu, Peng Zhang, Lilong Du, Jingyi Hou, Baoshan Xu:
Identification of key genes and expression profiles in osteoarthritis by co-expressed network analysis. 107225 - Praveen Kumar Guttula, Mukesh Kumar Gupta:
Examining the co-expression, transcriptome clustering and variation using fuzzy cluster network of testicular stem cells and pluripotent stem cells compared with other cell types. 107227 - Hongyi Yang, Zainab Ameir Ahmad, Yuhua Song:
Molecular insight for the role of key residues of calreticulin in its binding activities: A computational study. 107228 - Yi-Ran Wang, Ling-Bing Meng, Fei Su, Yong Qiu, Ji-Hua Shi, Xue Xu, Qing-Feng Luo:
Insights regarding novel biomarkers and the pathogenesis of primary colorectal carcinoma based on bioinformatic analysis. 107229 - Yawen Gao, Guizhen Wang, Xiyan Wang, Yanan Yang, Xiaodi Niu:
Structure-Activity relationship of MDSA and its derivatives against Staphylococcus aureus Ser/Thr phosphatase Stp1. 107230 - Farzaneh Afzali, Zarrin Minuchehr, Samira Jahangiri, Mohammad Mehdi Ranjbar:
Immunopeptidome screening to design An immunogenic construct against PRAME positive breast cancer; An in silico study. 107231 - Hasan Rawashdeh, Shatha Awawdeh, Fatima Shannag, Esraa Henawi, Hossam Faris, Nadim Obeid, Jon Hyett:
Intelligent system based on data mining techniques for prediction of preterm birth for women with cervical cerclage. 107233 - Lizhong Zhang, He Ma, Wei Qian, Haiyan Li:
Protein structure optimization using improved simulated annealing algorithm on a three-dimensional AB off-lattice model. 107237 - Md. Parvez Mosharaf, Md. Mehedi Hasan, Fee Faysal Ahmed, Mst. Shamima Khatun, Mohammad Ali Moni, Md. Nurul Haque Mollah:
Computational prediction of protein ubiquitination sites mapping on Arabidopsis thaliana. 107238 - Arindam Ghosh, Anup Som:
RNA-Seq analysis reveals pluripotency-associated genes and their interaction networks in human embryonic stem cells. 107239 - Naiqiang Zhu, Jingyi Hou:
Exploring the mechanism of action Xianlingubao Prescription in the treatment of osteoporosis by network pharmacology. 107240 - Zhe Jin, Ying Wang, Xiao-Fei Yu, Qi-Qi Tan, Shi-Shao Liang, Tai Li, Hong Zhang, Pang-Chui Shaw, Jian Wang, Chun Hu:
Structure-based virtual screening of influenza virus RNA polymerase inhibitors from natural compounds: Molecular dynamics simulation and MM-GBSA calculation. 107241
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