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Computers in Biology and Medicine, Volume 164
Volume 164, September 2023
- Saisai Teng, Chenglin Yin, Yu Wang, Xiandong Chen, Zhongmin Yan, Lizhen Cui, Leyi Wei:
MolFPG: Multi-level fingerprint-based Graph Transformer for accurate and robust drug toxicity prediction. 106904 - Yongsan Liu, Shixuan Guan, Tengsheng Jiang, Qiming Fu, Jieming Ma, Zhiming Cui, Yijie Ding, Hongjie Wu:
DNA protein binding recognition based on lifelong learning. 107094 - Alberto Coccarelli, Sanjay Pant:
On the Ca2+ elevation in vascular endothelial cells due to inositol trisphosphate-sensitive store receptors activation: A data-driven modeling approach. 107111 - Weiying Xing, Yinni Shi, Chaoyong Wu, Yiqiao Wang, Xu Wang:
Predicting blood pressure from face videos using face diagnosis theory and deep neural networks technique. 107112 - Longfei Li, Meiyun Wang, Xiaoming Jiang, Yusong Lin:
Universal multi-factor feature selection method for radiomics-based brain tumor classification. 107122 - Chuqi Lei, Zhangli Lu, Meng Wang, Min Li:
StackCPA: A stacking model for compound-protein binding affinity prediction based on pocket multi-scale features. 107131 - Hamed Mirzabagherian, Mohammad Bagher Menhaj, Amir Abolfazl Suratgar, Nasibeh Talebi, Mohammad Reza Abbasi Sardari, Atena Sajedin:
Temporal-spatial convolutional residual network for decoding attempted movement related EEG signals of subjects with spinal cord injury. 107159 - Bharti Mishra, Shashikanta Tarai, Vinod Ratre, Arindam Bit:
Processing of attentional and emotional stimuli depends on retrospective response of foot pressure: Conceptualizing neuron-cognitive distribution in human brain. 107186
- Xiangyan Meng, Tonghui Zou:
Clinical applications of graph neural networks in computational histopathology: A review. 107201
- Zhenyu Zheng, Yidi Wang, Malong Guo, Jiayi Guo, Jiaxuan Cui, Wenxiao Zhu, Weidong Cheng, Yonghui Liu, Hongxun Cui:
Estradiol is a key candidate for treating Ankylosing Spondylolisthesis with Traditional Chinese Medicine. 107206
- Jiawei Gu, Xuan Qian, Qian Zhang, Hongliang Zhang, Fang Wu:
Unsupervised domain adaptation for Covid-19 classification based on balanced slice Wasserstein distance. 107207
- Mingyang Zhong, Jiahui Wen, Jingwei Ma, Hao Cui, Qiuling Zhang, Morteza Karimzadeh Parizi:
A hierarchical multi-leadership sine cosine algorithm to dissolving global optimization and data classification: The COVID-19 case study. 107212 - Yugen Yi, Yan Jiang, Bin Zhou, Ningyi Zhang, Jiangyan Dai, Xin Huang, Qinqin Zeng, Wei Zhou:
C2FTFNet: Coarse-to-fine transformer network for joint optic disc and cup segmentation. 107215 - Teddy Lazebnik, Liron Simon Keren:
Cancer-inspired genomics mapper model for the generation of synthetic DNA sequences with desired genomics signatures. 107221 - Xiucai Ye, Yifan Shang, Tianyi Shi, Weihang Zhang, Tetsuya Sakurai:
Multi-omics clustering for cancer subtyping based on latent subspace learning. 107223 - Yong Chen, Xuesong Lu, Qinlan Xie:
Collaborative networks of transformers and convolutional neural networks are powerful and versatile learners for accurate 3D medical image segmentation. 107228 - Kok Kiang Long, Stephen Wai Hang Kwok, Jayne Kotz, Guanjin Wang:
A deep multi-view imbalanced learning approach for identifying informative COVID-19 tweets from social media. 107232 - Robert Rockenfeller:
Three-dimensional spinal shape changes during daily activities. 107236 - Essam H. Houssein, Nagwan M. Abdel Samee, Noha F. Mahmoud, Kashif Hussain:
Dynamic Coati Optimization Algorithm for Biomedical Classification Tasks. 107237 - Sirui Liang, Yanxi Zhao, Junru Jin, Jianbo Qiao, Ding Wang, Yu Wang, Leyi Wei:
Rm-LR: A long-range-based deep learning model for predicting multiple types of RNA modifications. 107238 - Priyash Dhakal, Hilal Tayara, Kil To Chong:
An ensemble of stacking classifiers for improved prediction of miRNA-mRNA interactions. 107242 - Meng Zhang, Jian Zhao, Jing Wu, Yulan Wang, Minhui Zhuang, Lingxiao Zou, Renlong Mao, Bin Jiang, Jingjing Liu, Xiaofeng Song:
In-depth characterization and identification of translatable lncRNAs. 107243 - Penghao Wang, Ben Cao, Tao Ma, Bin Wang, Qiang Zhang, Pan Zheng:
DUHI: Dynamically updated hash index clustering method for DNA storage. 107244 - Kai Ping Cheng, Wan Xiang Shen, Yu Yang Jiang, Yan Chen, Yuzong Chen, Ying Tan:
Deep learning of 2D-Restructured gene expression representations for improved low-sample therapeutic response prediction. 107245 - Enbin Yang, Hao Zhang, Zinan Zang, Zhiyong Zhou, Shuo Wang, Zhen Liu, Yuanning Liu:
GCNfold: A novel lightweight model with valid extractors for RNA secondary structure prediction. 107246 - Xue Zhang, Jingcheng Wu, Joseph Baeza, Katie Gu, Yichun Zheng, Shuqing Chen, Zhan Zhou:
DeepTAP: An RNN-based method of TAP-binding peptide prediction in the selection of tumor neoantigens. 107247 - Fang Chen, Jian Wang, Han Liu, Wentao Kong, Zhe Zhao, Longfei Ma, Hongen Liao, Daoqiang Zhang:
Frequency constraint-based adversarial attack on deep neural networks for medical image classification. 107248 - Francisco Daniel Pérez-Cano, Juan-Roberto Jiménez-Pérez, Ángel Jesús Molina-Viedma, Elías López-Alba, Adrián Luque-Luque, Alberto D. Delgado-Martínez, F. A. Díaz-Garrido, Juan José Jiménez-Delgado:
Human femur fracture by mechanical compression: Towards the repeatability of bone fracture acquisition. 107249 - Md. Masud Rana, Duc Duy Nguyen:
Geometric graph learning with extended atom-types features for protein-ligand binding affinity prediction. 107250 - Yinyao Dai, Yaguan Qian, Fang Lu, Bin Wang, Zhaoquan Gu, Wei Wang, Jian Wan, Yanchun Zhang:
Improving adversarial robustness of medical imaging systems via adding global attention noise. 107251 - Benzhe Su, Xiaoxiao Wang, Yang Ouyang, Xiaohui Lin:
DA-SRN: Omics data analysis based on the sample network optimization for complex diseases. 107252 - Suchen Li, Zhuo Tang, Lifang Yang, Mengmeng Li, Zhigang Shang:
Application of deep reinforcement learning for spike sorting under multi-class imbalance. 107253 - Jing Luo, Yaojie Wang, Shuxiang Xia, Na Lu, Xiaoyong Ren, Zhenghao Shi, Xinhong Hei:
A shallow mirror transformer for subject-independent motor imagery BCI. 107254 - Xiaoming Zhao, Yuehui Liao, Jiahao Xie, Xiaxia He, Shiqing Zhang, Guoyu Wang, Jiangxiong Fang, Hongsheng Lu, Jun Yu:
BreastDM: A DCE-MRI dataset for breast tumor image segmentation and classification. 107255 - Xun Gong, Shuai Yuan, Yang Xiang, Lin Fan, Hong Zhou:
Domain knowledge-guided adversarial adaptive fusion of hybrid breast ultrasound data. 107256 - Wenfeng Li, Farah Bano, Abbas Khan, Dong-Qing Wei, Abdulrahman Alshammari, Bin Xu, Yanjing Wang:
Inhibition of cMYC-MAX transcription factors hetero-dimerization with structurally engineered omoMYC to downregulate oncogenic pathways in renal carcinoma. 107257 - Jiahui Chen, Daniel R. Woldring, Faqing Huang, Xuefei Huang, Guo-Wei Wei:
Topological deep learning based deep mutational scanning. 107258 - Manish Sharma, Sarv Verma, Divyansh Anand, Vikram M. Gadre, U. Rajendra Acharya:
CAPSCNet: A novel scattering network for automated identification of phasic cyclic alternating patterns of human sleep using multivariate EEG signals. 107259 - Zhongshen Li, Junru Jin, Wentao Long, Leyi Wei:
PLPMpro: Enhancing promoter sequence prediction with prompt-learning based pre-trained language model. 107260 - Zhaoyang Huang, Shengjian Chen, Liang Yu:
Predicting new drug indications based on double variational autoencoders. 107261 - Chaoyu Zhu, Xiaoqiong Xia, Nan Li, Fan Zhong, Zhihao Yang, Lei Liu:
RDKG-115: Assisting drug repurposing and discovery for rare diseases by trimodal knowledge graph embedding. 107262 - Yuchen Shi, Jian Wan, Xin Zhang, Yuyu Yin:
CL-Impute: A contrastive learning-based imputation for dropout single-cell RNA-seq data. 107263 - Linkun Cai, Erwei Zhao, Haijun Niu, Yawen Liu, Tingting Zhang, Dong Liu, Zhe Zhang, Jing Li, Penggang Qiao, Han Lv, Pengling Ren, Wei Zheng, Zhenchang Wang:
A machine learning approach to predict cerebral perfusion status based on internal carotid artery blood flow. 107264 - Ping Xuan, Honglei Bai, Hui Cui, Xiaowen Zhang, Toshiya Nakaguchi, Tiangang Zhang:
Specific topology and topological connection sensitivity enhanced graph learning for lncRNA-disease association prediction. 107265 - Jörg Sander, Bob D. de Vos, Steffen Bruns, Nils Planken, Max A. Viergever, Tim Leiner, Ivana Isgum:
Reconstruction and completion of high-resolution 3D cardiac shapes using anisotropic CMRI segmentations and continuous implicit neural representations. 107266 - Harriet Violet Chorney, James Richard Forbes, Mark Driscoll:
System identification and simulation of soft tissue force feedback in a spine surgical simulator. 107267
- Zhaoshan Liu, Qiujie Lv, Ziduo Yang, Yifan Li, Chau Hung Lee, Lei Shen:
Recent progress in transformer-based medical image analysis. 107268
- Wei Zhou, Weiqi Bai, Jianhang Ji, Yugen Yi, Ningyi Zhang, Wei Cui:
Dual-path multi-scale context dense aggregation network for retinal vessel segmentation. 107269 - Junxiao Xie, Huan Zhao, Junyi Cao, Qiumin Qu, Hongmei Cao, Wei-Hsin Liao, Yaguo Lei, Linchuan Guo:
Wearable multisource quantitative gait analysis of Parkinson's diseases. 107270 - Mustafa Turkyilmazoglu:
Hyperthermia therapy of cancerous tumor sitting in breast via analytical fractional model. 107271 - Thomas Sühn, Nazila Esmaeili, Moritz Spiller, Maximilian Costa, Axel Boese, Jessica Bertrand, Ajay K. Pandey, Christoph H. Lohmann, Michael Friebe, Alfredo Illanes:
Vibro-acoustic sensing of tissue-instrument-interactions allows a differentiation of biological tissue in computerised palpation. 107272 - Longsong Zhou, Liming Liang, Xiaoqi Sheng:
GA-Net: Ghost convolution adaptive fusion skin lesion segmentation network. 107273 - Raid Halawani, Michael Buchert, Yi-Ping Phoebe Chen:
Deep learning exploration of single-cell and spatially resolved cancer transcriptomics to unravel tumour heterogeneity. 107274 - Mingyu Du, Yuan Yang, Lin Zhang:
Diagnosis of atrial fibrillation based on unsupervised domain adaptation. 107275 - Jayanth Jeevanandam, V. L. S. Prasad Burra, Nambiappan T. Saraswathi:
Conformational variation of site specific glycated albumin: A Molecular dynamics approach. 107276 - Chak Fong Chong, Yapeng Wang, Benjamin K. Ng, Wuman Luo, Xu Yang:
Image projective transformation rectification with synthetic data for smartphone-captured chest X-ray photos classification. 107277 - Muhammad Fahim, Muhammad Sajid, Nasir Ali, Muhammad Naveed:
Unsteady blood flow of Carreau fluid in a porous saturated medium with stenosis under the influence of acceleration and magnetic fields: A comprehensive analysis. 107278 - Arun Kumar Sumaithangi Thatai, Shruthi Ammankallu, Rex Devasahayam Arokia Balaya, Sreelakshmi Pathappillil Soman, Mahammad Nisar, Sreeranjini Babu, Levin John, Anju George, Christy Kallely Anto, Diya Sanjeev, Mrudula Kinarulla Kandiyil, Sini S. Raj, Kriti Awasthi, S. S. Vinodchandra, Thottethodi Subrahmanya Keshava Prasad, Rajesh Raju:
VirhostlncR: A comprehensive database to explore lncRNAs and their targets in viral infections. 107279 - Zhongzheng Huang, Jiawei Wu, Tao Wang, Zuoyong Li, Anastasia Ioannou:
Class-Specific Distribution Alignment for semi-supervised medical image classification. 107280 - Rahul Gautam Talukdar, Ceby Mullakkara Saviour, Santanu Dhara, Sanjay Gupta:
Biomechanical analysis of functionally graded porous interbody cage for lumbar spinal fusion. 107281
- Weibo Wang, Dimei Qin, Shubo Wang, Yu Fang, Yongkang Zheng:
A multi-channel UNet framework based on SNMF-DCNN for robust heart-lung-sound separation. 107282
- Yulong Shi, Xinben Zhang, Yanqing Yang, Tingting Cai, Cheng Peng, Leyun Wu, Liping Zhou, Jiaxin Han, Minfei Ma, Weiliang Zhu, Zhijian Xu:
D3CARP: a comprehensive platform with multiple-conformation based docking, ligand similarity search and deep learning approaches for target prediction and virtual screening. 107283 - Libo Zhao, Xiaolong Qian, Yinghui Guo, Jiaqi Song, Jinbao Hou, Jun Gong:
MSKD: Structured knowledge distillation for efficient medical image segmentation. 107284 - Nelson R. C. Monteiro, Tiago Pereira, Ana Catarina D. Machado, José Luís Oliveira, Maryam Abbasi, Joel P. Arrais:
FSM-DDTR: End-to-end feedback strategy for multi-objective De Novo drug design using transformers. 107285 - Xuelan Zhang, Baoyan Mao, Yue Che, Jiaheng Kang, Mingyao Luo, Aike Qiao, Youjun Liu, Hitomi Anzai, Makoto Ohta, Yuting Guo, Gaoyang Li:
Physics-informed neural networks (PINNs) for 4D hemodynamics prediction: An investigation of optimal framework based on vascular morphology. 107287 - Yuxuan Zhou, Jingcheng Wu, Shihao Yao, Yulian Xu, Wenbin Zhao, Yunguang Tong, Zhan Zhou:
DeepCIP: A multimodal deep learning method for the prediction of internal ribosome entry sites of circRNAs. 107288 - Tadesse M. Abegaz, Ahmead Baljoon, Oluwaseun Kilanko, Fatimah Sherbeny, Askal Ayalew Ali:
Machine learning algorithms to predict major adverse cardiovascular events in patients with diabetes. 107289 - Penghui Li, Rui Zhou, Jin He, Shifeng Zhao, Yun Tian:
A global-frequency-domain network for medical image segmentation. 107290 - Marina Pérez-Aliacar, Jacobo Ayensa-Jiménez, Manuel Doblaré:
Modelling cell adaptation using internal variables: Accounting for cell plasticity in continuum mathematical biology. 107291 - Lunjian Li, Xuanchi Liu, Minoo Patel, Lihai Zhang:
Depth camera-based model for studying the effects of muscle loading on distal radius fracture healing. 107292 - Yupeng Li, Yujie Fu, Yining Liu, Dong Zhao, Lei Liu, Sami Bourouis, Abeer D. Algarni, Chuyue Zhong, Peiliang Wu:
An optimized machine learning method for predicting wogonin therapy for the treatment of pulmonary hypertension. 107293 - Gabriella Bretti, Sean McGinty, Giuseppe Pontrelli:
Modelling smart drug release with functionally graded materials. 107294 - Ahsanullah Yunas Mahmoud, Daniel Neagu, Daniele Scrimieri, Amr Rashad Ahmed Abdullatif:
Early diagnosis and personalised treatment focusing on synthetic data modelling: Novel visual learning approach in healthcare. 107295 - Manuel Menor-Flores, Miguel A. Vega-Rodríguez, Felipe Molina:
Iterative Level-0: A new and fast algorithm to traverse mating networks calculating the inbreeding and relationship coefficients. 107296 - Zhaojin Fu, Jinjiang Li, Zhen Hua:
Non-same-scale feature attention network based on BPD for medical image segmentation. 107297
- Kaihui Zheng, Jianhua Wu, Youjun Yuan, Lei Liu:
From single to multiple: Generalized detection of Covid-19 under limited classes samples. 107298
- Murilo Lamim Bello, Guilherme Eduardo M. Mendes, Ana Cláudia R. Silva, Robson X. Faria:
Virtual screening indicates potential inhibitors of the P2X7 receptor. 107299 - Yuchao Hou, Wendong Zhang, Rong Cheng, Guojun Zhang, Yanjie Guo, Yan Hao, Hongxin Xue, Zhihao Wang, Long Wang, Yanping Bai:
Meta-adaptive-weighting-based bilateral multi-dimensional refined space feature attention network for imbalanced breast cancer histopathological image classification. 107300 - Lei Yang, Chenxu Zhai, Yanhong Liu, Hongnian Yu:
CFHA-Net: A polyp segmentation method with cross-scale fusion strategy and hybrid attention. 107301
- Ramsha Ahmed, Aamna Al Shehhi, Bilal Hassan, Naoufel Werghi, Mohamed L. Seghier:
An appraisal of the performance of AI tools for chronic stroke lesion segmentation. 107302
- Dong Ouyang, Yong Liang, Le Li, Ning Ai, Shanghui Lu, Mingkun Yu, Xiaoying Liu, Shengli Xie:
Integration of multi-omics data using adaptive graph learning and attention mechanism for patient classification and biomarker identification. 107303 - Zhentao Hu, Yanyang Li, Zheng Wang, Shuo Zhang, Wei Hou:
Conv-Swinformer: Integration of CNN and shift window attention for Alzheimer's disease classification. 107304 - Xiongzhi Wang, Yunfeng Nie, Wenqi Ren, Min Wei, Jingang Zhang:
Multi-scale, multi-dimensional binocular endoscopic image depth estimation network. 107305 - Lingyu Jiang, Hao Han, Jian Yang, Runxin Fang, Ying Xin, Qiang Chen, Jing Yao, Zhiyong Li:
Do the stent blind insertion into the main portal vein (MPV) and stent diameter influence the surgical outcome of the transjugular intrahepatic portosystemic shunt (TIPS)? 107306 - Sayed Haidar Abbas Raza, Ruimin Zhong, Shen Xing, Xiaoting Yu, Liang Chengcheng, Linsen Zan, Nicola M. Schreurs, Sameer D. Pant, Hongtao Lei:
Based on the Cancer Genome Atlas Database Development of a prognostic model of RNA binding protein in stomach adenocarcinoma. 107307 - Xiaoya Chong, Min Cheng, Wenqi Fan, Qing Li, Howard Leung:
M-Denoiser: Unsupervised image denoising for real-world optical and electron microscopy data. 107308 - Amir Moslemi, Mahdi Bidar, Arash Ahmadian:
Subspace learning using structure learning and non-convex regularization: Hybrid technique with mushroom reproduction optimization in gene selection. 107309 - Yongwei Wang, Yuan Li, Zhiqi Shen, Yuhui Qiao:
Reversing skin cancer adversarial examples by multiscale diffusive and denoising aggregation mechanism. 107310 - Jawad Ahmad Dar, Kamal Kr. Srivastava, Alok Mishra:
Lung anomaly detection from respiratory sound database (sound signals). 107311 - Shu Lih Oh, V. Jahmunah, Elizabeth Emma Palmer, Prabal Datta Barua, Sengul Dogan, Turker Tuncer, Salvador García, Filippo Molinari, U. Rajendra Acharya:
EpilepsyNet: Novel automated detection of epilepsy using transformer model with EEG signals from 121 patient population. 107312 - Manfu Ma, Xiaoming Zhang, Yong Li, Xia Wang, Ruigen Zhang, Yang Wang, Penghui Sun, Xuegang Wang, Xuan Sun:
ConvLSTM coordinated longitudinal transformer under spatio-temporal features for tumor growth prediction. 107313 - Pietro Delre, Marialessandra Contino, Domenico Alberga, Michele Saviano, Nicola Corriero, Giuseppe Felice Mangiatordi:
ALPACA: A machine Learning Platform for Affinity and selectivity profiling of CAnnabinoids receptors modulators. 107314 - Ritesh Chandra Tewari, Sandeep Sharma, Aurobinda Routray, Jhareswar Maiti:
Effective fall detection and post-fall breath rate tracking using a low-cost CW Doppler radar sensor. 107315 - Yuchao Lyu, Xi Jiang, Yinghao Xu, Junyi Hou, Xiaoyan Zhao, Xijun Zhu:
ARU-GAN: U-shaped GAN based on Attention and Residual connection for super-resolution reconstruction. 107316 - Ozgur Can Arican, Özgür Gümüs:
PredDRBP-MLP: Prediction of DNA-binding proteins and RNA-binding proteins by multilayer perceptron. 107317 - Fuzhi Cao, Zhenfeng Gao, Shengjie Qi, Kaihua Chen, Min Xiang, Nan An, Xiaolin Ning:
Realistic three-layer head phantom for optically pumped magnetometer-based magnetoencephalography. 107318
- Lijia Zhi, Wujun Jiang, Shaomin Zhang, Tao Zhou:
Deep neural network pulmonary nodule segmentation methods for CT images: Literature review and experimental comparisons. 107321
- Pavel V. Nikitin, G. R. Musina, A. L. Fayzullin, A. A. Bakulina, V. N. Nikolaev, V. P. Mikhailov, L. Werkenbark, M. Kjelin, D. Yu Usachev, P. S. Timashev:
Сell clusters isolation in glioblastomas and their functional and molecular characterization using new morphometric approaches. 107322 - Fahim A. Zaman, Lichun Zhang, Honghai Zhang, Milan Sonka, Xiaodong Wu:
Segmentation quality assessment by automated detection of erroneous surface regions in medical images. 107324 - Talib Dbouk, F. Roger, Dimitris Drikakis, Samer Ali, H. Menu, E. Wiel:
The impact of endotracheal intubation on oxygen delivery, trachea pressure and wall deformation. 107325 - Yanteng Zhang, Xiaohai He, Yi Hao Chan, Qizhi Teng, Jagath C. Rajapakse:
Multi-modal graph neural network for early diagnosis of Alzheimer's disease from sMRI and PET scans. 107328 - Dan Liu, Lulu Yao, Xiaolei Ding, Huan Zhou:
Multi-omics immune regulatory mechanisms in lung adenocarcinoma metastasis and survival time. 107333 - Bohao Xu, Yingwei Fan, Jingming Liu, Guobin Zhang, Zhiping Wang, Zhili Li, Wei Guo, Xiaoying Tang:
CHSNet: Automatic lesion segmentation network guided by CT image features for acute cerebral hemorrhage. 107334 - Lida Wang, Xiaolei Ding, Xun Qiu:
Mechanism of breast cancer immune microenvironment in prognosis of heart failure. 107339 - Beilei Zhang, Zhanghang Li, Kunqin Wang, Mingke Duan, Yidan Yin, Qirui Zhan, Fu Wang, Ruifang An:
Exploration of pyroptosis-associated prognostic gene signature and lncRNA regulatory network in ovarian cancer. 107343 - Wei Fan, Chi Zhang, Qing-Dong Wang, Li-Xin Guo, Ming Zhang:
The effects of topping-off instrumentation on biomechanics of sacroiliac joint after lumbosacral fusion. 107357