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Journal of Bioinformatics and Computational Biology, Volume 23

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Volume 23, Number 1, February 2025

Research Paper

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  - journals/jbcb/KhristichenkoNG25
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Michael Khristichenko, Yuri M. Nechepurenko, Dmitry Grebennikov, Gennady Bocharov:
Computation and analysis of stationary and periodic solutions of the COVID-19 infection dynamics model. 2540001:1-2540001:18
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  - journals/jbcb/LowKPL25
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Boon How Low, Kaushal Krishna Kaliskar, Stefano Perna, Bernett Lee:
Cross-cellular analysis of chromatin accessibility markers H3K4me3 and DNase in the context of detecting cell-identity genes: An "all-or-nothing" approach. 2540002:1-2540002:20
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I. T. Anjusha, K. A. Abdul Nazeer, N. Saleena:
Drug repurposing for non-small cell lung cancer by predicting drug response using pathway-level graph convolutional network. 2550001:1-2550001:17
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  - journals/jbcb/ChunLW25
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Yujie Chun, Huaihu Li, Shunfang Wang:
SS-DTI: A deep learning method integrating semantic and structural information for drug-target interaction prediction. 2550002:1-2550002:25
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  - journals/jbcb/SharmilaSS25
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K. Soni Sharmila, Thanga Revathi S., Pokkuluri Kiran Sree:
DDINet: Drug-drug interaction prediction network based on multi-molecular fingerprint features and multi-head attention centered weighted autoencoder. 2550003:1-2550003:27

Volume 23, Number 2, April 2025

Critical Comments

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Paulo Henrique Ribeiro, Adenilso Simão:
Analysis of clonal evolution in cancer: A computational perspective. 2531001:1-2531001:32

Research Paper

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Valentina A. Grushina, Ivan S. Yevshin, Oleg A. Gusev, Fedor A. Kolpakov, Olga I. Stanishevskaya, Elena S. Fedorova, Natalia A. Zinovieva, Sergey S. Pintus:
Prediction and annotation of alternative transcription starts and promoter shift in the chicken genome. 2550004:1-2550004:16
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Na Zhao, Haihong Liu, Fang Yan:
Computational modeling and dynamical analysis for B. subtilis competence genic regulation circuit with multiple time delays and external noisy regulation. 2550005:1-2550005:36
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Siyuan Guo, Lexuan Wang, Chang Jin, Jinxian Wang, Han Peng, Huayang Shi, Wengen Li, Jihong Guan, Shuigeng Zhou:
M³-20M: A large-scale multi-modal molecule dataset for AI-driven drug design and discovery. 2550006:1-2550006:27

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