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ORCIDQuantitative Biology, Volume 5
Volume 5, Number 1, March 2017
- Cheemeng Tan
:
Special collection of synthetic biology, aiming for quantitative control of cellular systems. 1-2 - Krishna Choudhary, Fei Deng, Sharon Aviran:
Comparative and integrative analysis of RNA structural profiling data: current practices and emerging questions. 3-24 - Yijun Guo, Bing Wei, Shiyan Xiao, Dongbao Yao, Hui Li, Huaguo Xu, Tingjie Song, Xiang Li, Haojun Liang:
Recent advances in molecular machines based on toehold-mediated strand displacement reaction. 25-41 - Russell Brown, Andreas Lengeling, Baojun Wang:
Phage engineering: how advances in molecular biology and synthetic biology are being utilized to enhance the therapeutic potential of bacteriophages. 42-54 - Mehdi Sadeghpour, Alan Veliz-Cuba, Gábor Orosz, Kresimir Josic, Matthew R. Bennett:
Bistability and oscillations in co-repressive synthetic microbial consortia. 55-66 - Jingwen Guan, Xu Shi, Roberto Burgos, Lanying Zeng:
Visualization of phage DNA degradation by a type I CRISPR-Cas system at the single-cell level. 67-75 - Keith C. Heyde, MaryJoe K. Rice, Sung-Ho Paek, Felicia Y. Scott, Ruihua Zhang, Warren C. Ruder:
Modeling information exchange between living and artificial cells. 76-89 - Hailin Meng, Yingfei Ma, Guoqin Mai, Yong Wang, Chenli Liu:
Construction of precise support vector machine based models for predicting promoter strength. 90-98 - Weizhong Tu, Shaozhen Ding, Ling Wu, Zhe Deng, Hui Zhu, Xiaotong Xu, Chen Lin, Chaonan Ye, Minlu Han, Mengna Zhao, Juan Liu, Zixin Deng, Junni Chen, Dong-Qing Wei, Qian-Nan Hu:
SynBioEcoli: a comprehensive metabolism network of engineered E. coli in three dimensional visualization. 99-104 - Junbiao Dai, Yizhi Cai, Yinjing Yuan, Huanming Yang, Jef D. Boeke:
Whole genome synthesis: from poliovirus to synthetic yeast. 105-109
Volume 5, Number 2, June 2017
- Meiyan Wang, Yuanhuan Yu, Jiawei Shao, Boon Chin Heng, Haifeng Ye:
Engineering synthetic optogenetic networks for biomedical applications. 111-123 - David J. Menn, Ri-Qi Su, Xiao Wang:
Control of synthetic gene networks and its applications. 124-135 - Zeyu Zhang, Xiu-Jie Wang:
Current progresses of 3D bioprinting based tissue engineering. 136-142 - Liaofu Luo, Jun Lv:
Quantum conformational transition in biological macromolecule. 143-158 - Sai Zhang, Muxuan Liang, Zhongjun Zhou, Chen Zhang, Ning Chen, Ting Chen, Jianyang Zeng:
Elastic restricted Boltzmann machines for cancer data analysis. 159-172 - Wei Yu, Yu Wu:
A systematic analysis of intrinsic regulators for HIV-1 R5 to X4 phenotypic switch. 173-182 - Mohamed Nadhir Djekidel, Mengjie Wang, Michael Q. Zhang, Juntao Gao:
HiC-3DViewer: a new tool to visualize Hi-C data in 3D space. 183-190 - Guanyu Wang:
Global quantitative biology can illuminate ontological connections between diseases. 191-198 - Zhirong Sun, Kui Hua, Xuegong Zhang, Feng-Biao Guo, Jian Huang:
The 7th National Conference on Bioinformatics and Systems Biology of China. 199-201
Volume 5, Number 3, September 2017
- Zefeng Wang:
PICB: facing the new challenge and opportunity of big data. 203-204 - Qin Yang, Ying Wang, Li Yang:
Multifaceted roles of complementary sequences on circRNA formation. 205-209 - Ganlu Hu, Guang-Zhong Wang:
Decoding nervous system by single-cell RNA sequencing. 210-214 - Zhijun Han, Gang Wei:
Computational tools for Hi-C data analysis. 215-225 - Shiqi Tu, Zhen Shao:
An introduction to computational tools for differential binding analysis with ChIP-seq data. 226-235 - Kai Yuan, Ying Zhou, Xumin Ni, Yuchen Wang, Chang Liu, Shuhua Xu:
Models, methods and tools for ancestry inference and admixture analysis. 236-250 - Jing-Dong J. Han, Lei Hou, Na Sun, Chi Xu, Joseph McDermott, Dan Wang:
The system capacity view of aging and longevity. 251-259 - Yi Xiao, Tiangen Chang, Qingfeng Song, Shuyue Wang, Danny Tholen, Yu Wang, Changpeng Xin, Guangyong Zheng, Honglong Zhao, Xin-Guang Zhu:
ePlant for quantitative and predictive plant science research in the big data era - Lay the foundation for the future model guided crop breeding, engineering and agronomy. 260-271 - Zhen Wang, Zefeng Wang, Yixue Li:
Strategic planning for national biomedical big data infrastructure in China. 272-275
Volume 5, Number 4, December 2017
- Zhaohui S. Qin:
Special collection of bioinformatics in the era of precision medicine. 277-279 - Lu Wang, Lipi R. Acharya, Changxin Bai, Dongxiao Zhu:
Transcriptome assembly strategies for precision medicine. 280-290 - Jie Zheng, Huan Li, Qingzhi Liu, Yongqun He:
The Ontology of Biological and Clinical Statistics (OBCS)-based statistical method standardization and meta-analysis of host responses to yellow fever vaccines. 291-301 - Saurav Mallik, Zhongming Zhao:
Towards integrated oncogenic marker recognition through mutual information-based statistically significant feature extraction: an association rule mining based study on cancer expression and methylation profiles. 302-327 - Sha Cao, Yi Zhou, Yue Wu, Tianci Song, Burair Alsaihati, Ying Xu:
Transcription regulation by DNA methylation under stressful conditions in human cancer. 328-337 - Yiyi Liu, Hongyu Zhao:
Variable importance-weighted random forests. 338-351 - Jiao Chen, Dongxiao Zhu, Yanni Sun:
Cap-seq reveals complicated miRNA transcriptional mechanisms in C. elegans and mouse. 352-367 - Weiming Zhang, Debashis Ghosh:
On the use of kernel machines for Mendelian randomization. 368-379 - Varshini Vasudevaraja, Jamie Renbarger, Ridhhi Girish Shah, Garrett Kinnebrew, Murray Korc, Limei Wang, Yang Huo, Enze Liu, Lang Li, Lijun Cheng:
PMTDS: a computational method based on genetic interaction networks for Precision Medicine Target-Drug Selection in cancer. 380-394
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