SIAM Journal on Scientific Computing, Volume 40

Volume 40, Number 1, 2018

Methods and Algorithms for Scientific Computing

• 
  Meng Wang, Shingyu Leung, Hongkai Zhao:
  Modified Virtual Grid Difference for Discretizing the Laplace-Beltrami Operator on Point Clouds.
• 
  Matthias Heinkenschloss, Dörte Jando:
  Reduced Order Modeling for Time-Dependent Optimization Problems with Initial Value Controls.
• 
  Alexandre Caboussat, Roland Glowinski:
  An Alternating Direction Method of Multipliers for the Numerical Solution of a Fully Nonlinear Partial Differential Equation Involving the Jacobian Determinant.
• 
  Tong Qin, Chi-Wang Shu:
  Implicit Positivity-Preserving High-Order Discontinuous Galerkin Methods for Conservation Laws.
• 
  Herbert Egger:
  A Robust Conservative Mixed Finite Element Method for Isentropic Compressible Flow on Pipe Networks.
• 
  Hannah Morgan, L. Ridgway Scott:
  Towards a Unified Finite Element Method for the Stokes Equations.
• 
  Kainan Wang, Tan Bui-Thanh, Omar Ghattas:
  A Randomized Maximum A Posteriori Method for Posterior Sampling of High Dimensional Nonlinear Bayesian Inverse Problems.
• 
  Maziar Raissi, Paris Perdikaris, George E. Karniadakis:
  Numerical Gaussian Processes for Time-Dependent and Nonlinear Partial Differential Equations.
• 
  Jonathan Feinberg, Vinzenz Gregor Eck, Hans Petter Langtangen:
  Multivariate Polynomial Chaos Expansions with Dependent Variables.
• 
  Huo-Yuan Duan, Roger C. E. Tan, Suh-Yuh Yang, Cheng-Shu You:
  A Mixed H¹-Conforming Finite Element Method for Solving Maxwell's Equations with Non-H¹ Solution.
• 
  Kevin W. Aiton, Tobin A. Driscoll:
  An Adaptive Partition of Unity Method for Chebyshev Polynomial Interpolation.
• 
  Ka Chun Cheung, Leevan Ling:
  A Kernel-Based Embedding Method and Convergence Analysis for Surfaces PDEs.
• 
  Christophe Chalons, Paola Goatin, Luis Miguel Villada:
  High-Order Numerical Schemes for One-Dimensional Nonlocal Conservation Laws.
• 
  Wouter Tierens:
  Unification of Leapfrog and Crank-Nicolson Finite Difference Time Domain Methods.
• 
  Herbert Egger, Thomas Kugler, Björn Liljegren-Sailer, Nicole Marheineke, Volker Mehrmann:
  On Structure-Preserving Model Reduction for Damped Wave Propagation in Transport Networks.
• 
  Ling Guo, Akil Narayan, Liang Yan, Tao Zhou:
  Weighted Approximate Fekete Points: Sampling for Least-Squares Polynomial Approximation.
• 
  Masayuki Yano:
  A Reduced Basis Method for Coercive Equations with an Exact Solution Certificate and Spatio-Parameter Adaptivity: Energy-Norm and Output Error Bounds.
• 
  Hadrien Montanelli, Yuji Nakatsukasa:
  Fourth-Order Time-Stepping For Stiff PDEs On The Sphere.
• 
  Alessandro Buccini, Marco Donatelli, Ronny Ramlau:
  A Semiblind Regularization Algorithm for Inverse Problems with Application to Image Deblurring.
• 
  Roland Glowinski, Shingyu Leung, Jianliang Qian:
  A Simple Explicit Operator-Splitting Method for Effective Hamiltonians.
• 
  Giacomo Dimarco, Lorenzo Pareschi, Giovanni Samaey:
  Asymptotic-Preserving Monte Carlo Methods for Transport Equations in the Diffusive Limit.
• 
  Diego Ruiz-Antolín, Alex Townsend:
  A Nonuniform Fast Fourier Transform Based on Low Rank Approximation.
• 
  Xiaoliang Wan, Xiang Zhou:
  Asymptotically Efficient Simulation of Elliptic Problems with Small Random Forcing.
• 
  Tommy Elfving, Per Christian Hansen:
  Unmatched Projector/Backprojector Pairs: Perturbation and Convergence Analysis.
• 
  Zhong-Zhi Bai, Wen-Ting Wu:
  On Greedy Randomized Kaczmarz Method for Solving Large Sparse Linear Systems.
• 
  Zhiqiang Sheng, Guangwei Yuan:
  Construction of Nonlinear Weighted Method for Finite Volume Schemes Preserving Maximum Principle.

Computational Methods in Science and Engineering

• 
  Nat Chun-Ho Leung, Christina C. Christara, Duy-Minh Dang:
  Partial Differential Equation Pricing of Contingent Claims under Stochastic Correlation.
• 
  Robert W. Anderson, Veselin A. Dobrev, Tzanio V. Kolev, Robert N. Rieben, Vladimir Z. Tomov:
  High-Order Multi-Material ALE Hydrodynamics.
• 
  Stefano Zonca, Christian Vergara, Luca Formaggia:
  An Unfitted Formulation for the Interaction of an Incompressible Fluid with a Thick Structure via an XFEM/DG Approach.
• 
  Johannes Semmler, Lukas Pflug, Michael Stingl:
  Material Optimization in Transverse Electromagnetic Scattering Applications.
• 
  Yali Gao, Xiaoming He, Liquan Mei, Xiaofeng Yang:
  Decoupled, Linear, and Energy Stable Finite Element Method for the Cahn-Hilliard-Navier-Stokes-Darcy Phase Field Model.
• 
  Yuezheng Gong, Jia Zhao, Xiaogang Yang, Qi Wang:
  Fully Discrete Second-Order Linear Schemes for Hydrodynamic Phase Field Models of Binary Viscous Fluid Flows with Variable Densities.
• 
  Majid K. Vakilzadeh, James L. Beck, Thomas Abrahamsson:
  Using Approximate Bayesian Computation by Subset Simulation for Efficient Posterior Assessment of Dynamic State-Space Model Classes.
• 
  Navid Rahimi, Pierre Kerfriden, Frank C. Langbein, Ralph R. Martin:
  CAD Model Simplification Error Estimation for Electrostatics Problems.
• 
  Alessio Fumagalli, Eirik Keilegavlen:
  Dual Virtual Element Method for Discrete Fractures Networks.
• 
  Duan Chen, Min Hyung Cho, Wei Cai:
  Accurate and Efficient Nyström Volume Integral Equation Method for Electromagnetic Scattering of 3-D Metamaterials in Layered Media.
• 
  Syuzanna Sargsyan, Steven L. Brunton, J. Nathan Kutz:
  Online Interpolation Point Refinement for Reduced-Order Models using a Genetic Algorithm.
• 
  Antti Lipponen, Janne M. J. Huttunen, Sami Romakkaniemi, Harri Kokkola, Ville Kolehmainen:
  Correction of Model Reduction Errors in Simulations.

Software and High-Performance Computing

• 
  Devin A. Matthews:
  High-Performance Tensor Contraction without Transposition.
• 
  Enver Kayaaslan, Cevdet Aykanat, Bora Uçar:
  1.5D Parallel Sparse Matrix-Vector Multiply.
• 
  Cameron W. Smith, Michel E. Rasquin, Dan Ibanez, Kenneth E. Jansen, Mark S. Shephard:
  Improving Unstructured Mesh Partitions for Multiple Criteria Using Mesh Adjacencies.
• 
  Robert C. Kirby, Lawrence Mitchell:
  Solver Composition Across the PDE/Linear Algebra Barrier.
• 
  Oguz Kaya, Bora Uçar:
  Parallel Candecomp/Parafac Decomposition of Sparse Tensors Using Dimension Trees.
• 
  Maxence Reberol, Bruno Lévy:
  Computing the Distance between Two Finite Element Solutions Defined on Different 3D Meshes on a GPU.

Volume 40, Number 2, 2018

Methods and Algorithms for Scientific Computing

• 
  Dante Kalise, Karl Kunisch:
  Polynomial Approximation of High-Dimensional Hamilton-Jacobi-Bellman Equations and Applications to Feedback Control of Semilinear Parabolic PDEs.
• 
  J. Quer, Luca Donati, Bettina G. Keller, M. Weber:
  An Automatic Adaptive Importance Sampling Algorithm for Molecular Dynamics in Reaction Coordinates.
• 
  Shi Jin, Hanqing Lu, Lorenzo Pareschi:
  Efficient Stochastic Asymptotic-Preserving Implicit-Explicit Methods for Transport Equations with Diffusive Scalings and Random Inputs.
• 
  Toni Karvonen, Simo Särkkä:
  Fully Symmetric Kernel Quadrature.
• 
  Evan S. Gawlik, Melvin Leok:
  Embedding-Based Interpolation on the Special Orthogonal Group.
• 
  Juan Manzanero, Gonzalo Rubio, Esteban Ferrer, Eusebio Valero:
  Dispersion-Dissipation Analysis for Advection Problems with Nonconstant Coefficients: Applications to Discontinuous Galerkin Formulations.
• 
  Jessica Cervi, Raymond J. Spiteri:
  High-Order Operator Splitting for the Bidomain and Monodomain Models.
• 
  Sebastiano Boscarino, Jing-Mei Qiu, Giovanni Russo:
  Implicit-Explicit Integral Deferred Correction Methods for Stiff Problems.
• 
  Erin C. Carson, Nicholas J. Higham:
  Accelerating the Solution of Linear Systems by Iterative Refinement in Three Precisions.
• 
  Boris Kramer, Alex A. Gorodetsky:
  System Identification via CUR-Factored Hankel Approximation.
• 
  Elias David Niño Ruiz, Adrian Sandu, Xinwei Deng:
  An Ensemble Kalman Filter Implementation Based on Modified Cholesky Decomposition for Inverse Covariance Matrix Estimation.
• 
  Ajay Jasra, Kengo Kamatani, Kody J. H. Law, Yan Zhou:
  Bayesian Static Parameter Estimation for Partially Observed Diffusions via Multilevel Monte Carlo.
• 
  Jun Zhu, Jianxian Qiu:
  New Finite Volume Weighted Essentially Nonoscillatory Schemes on Triangular Meshes.
• 
  Weizhu Bao, Chunmei Su:
  A Uniformly and Optimally Accurate Method for the Zakharov System in the Subsonic Limit Regime.
• 
  Niccolò Dal Santo, Simone Deparis, Andrea Manzoni, Alfio Quarteroni:
  Multi Space Reduced Basis Preconditioners for Large-Scale Parametrized PDEs.
• 
  Troy D. Butler, John D. Jakeman, Tim Wildey:
  Combining Push-Forward Measures and Bayes' Rule to Construct Consistent Solutions to Stochastic Inverse Problems.
• 
  Eleanor McDonald, Jennifer Pestana, Andrew J. Wathen:
  Preconditioning and Iterative Solution of All-at-Once Systems for Evolutionary Partial Differential Equations.
• 
  Peter Benner, Venera Khoromskaia, Boris N. Khoromskij:
  Range-Separated Tensor Format for Many-Particle Modeling.
• 
  Florent Chave, Daniele A. Di Pietro, Luca Formaggia:
  A Hybrid High-Order Method for Darcy Flows in Fractured Porous Media.
• 
  Wansheng Wang, Ting Rao, Weiwei Shen, Peng Zhong:
  A Posteriori Error Analysis for Crank-Nicolson-Galerkin Type Methods for Reaction-Diffusion Equations with Delay.
• 
  Andrew T. T. McRae, Colin J. Cotter, Chris J. Budd:
  Optimal-Transport-Based Mesh Adaptivity on the Plane and Sphere Using Finite Elements.
• 
  M. V. Rakhuba, Ivan V. Oseledets:
  Jacobi-Davidson Method on Low-Rank Matrix Manifolds.
• 
  Lulu Liu, David E. Keyes, Rolf H. Krause:
  A Note on Adaptive Nonlinear Preconditioning Techniques.
• 
  Andrew T. Barker, Veselin Dobrev, Jayadeep Gopalakrishnan, Tzanio V. Kolev:
  A Scalable Preconditioner for a Primal Discontinuous Petrov-Galerkin Method.
• 
  Roland Griesmaier, Rohit Kumar Mishra, Christian Schmiedecke:
  Inverse Source Problems for Maxwell's Equations and the Windowed Fourier Transform.

Computational Methods in Science and Engineering

• 
  Matthias Morzfeld, Marcus S. Day, Ray W. Grout, George Shu Heng Pau, Stefan Finsterle, John B. Bell:
  Iterative Importance Sampling Algorithms for Parameter Estimation.
• 
  Ivi C. Tsantili, Min Hyung Cho, Wei Cai, George E. Karniadakis:
  A Computational Stochastic Methodology for the Design of Random Meta-materials under Geometric Constraints.
• 
  Fei Liu, Lexing Ying:
  Sparsify and Sweep: An Efficient Preconditioner for the Lippmann-Schwinger Equation.
• 
  Stephan Schmidt, Maria Schutte, Andrea Walther:
  Efficient Numerical Solution of Geometric Inverse Problems Involving Maxwell's Equations Using Shape Derivatives and Automatic Code Generation.
• 
  Elsa Cazelles, Vivien Seguy, Jérémie Bigot, Marco Cuturi, Nicolas Papadakis:
  Geodesic PCA versus Log-PCA of Histograms in the Wasserstein Space.
• 
  Ionut-Gabriel Farcas, Benjamin Uekermann, Tobias Neckel, Hans-Joachim Bungartz:
  Nonintrusive Uncertainty Analysis of Fluid-Structure Interaction with Spatially Adaptive Sparse Grids and Polynomial Chaos Expansion.
• 
  C. Kristopher Garrett, Cory D. Hauck:
  A Fast Solver for Implicit Integration of the Vlasov-Poisson System in the Eulerian Framework.
• 
  Tiantian Liu, Minxin Chen, Benzhuo Lu:
  Efficient and Qualified Mesh Generation for Gaussian Molecular Surface Using Adaptive Partition and Piecewise Polynomial Approximation.
• 
  Yuezheng Gong, Jia Zhao, Qi Wang:
  Second Order Fully Discrete Energy Stable Methods on Staggered Grids for Hydrodynamic Phase Field Models of Binary Viscous Fluids.
• 
  Martin P. Neuenhofen, Chen Greif:
  Mstab: Stabilized Induced Dimension Reduction for Krylov Subspace Recycling.
• 
  Ion Victor Gosea, Mihály Petreczky, Athanasios C. Antoulas:
  Data-Driven Model Order Reduction of Linear Switched Systems in the Loewner Framework.
• 
  Tommaso Taddei, Anthony T. Patera:
  A Localization Strategy for Data Assimilation; Application to State Estimation and Parameter Estimation.
• 
  Raimund Bürger, Kenettinkara Sudarshan Kumar, Ricardo Ruiz-Baier, Héctor Torres:
  Coupling of Discontinuous Galerkin Schemes for Viscous Flow in Porous Media with Adsorption.

Software and High-Performance Computing

• 
  Björn Adlerborn, Lars Karlsson, Bo Kågström:
  Distributed One-Stage Hessenberg-Triangular Reduction with Wavefront Scheduling.
• 
  Laura Grigori, Sébastien Cayrols, James Weldon Demmel:
  Low Rank Approximation of a Sparse Matrix Based on LU Factorization with Column and Row Tournament Pivoting.
• 
  Stephan Schmidt:
  Weak and Strong Form Shape Hessians and Their Automatic Generation.
• 
  Shawn W. Walker:
  FELICITY: A Matlab/C++ Toolbox for Developing Finite Element Methods and Simulation Modeling.
• 
  Adam P. Harrison, Dileepan Joseph:
  High Performance Rearrangement and Multiplication Routines for Sparse Tensor Arithmetic.

Volume 40, Number 3, 2018

Methods and Algorithms for Scientific Computing

• 
  Ludvig af Klinteberg, Anna-Karin Tornberg:
  Adaptive Quadrature by Expansion for Layer Potential Evaluation in Two Dimensions.
• 
  Samira Nikkar, Jan Nordström:
  Summation-by-Parts Operators for Non-Simply Connected Domains.
• 
  Jun Wang, Leslie Greengard:
  An Adaptive Fast Gauss Transform in Two Dimensions.
• 
  Zhe Feng, Jinglai Li:
  An Adaptive Independence Sampler MCMC Algorithm for Bayesian Inferences of Functions.
• 
  Julius Reiss, Philipp Schulze, Jörn Sesterhenn, Volker Mehrmann:
  The Shifted Proper Orthogonal Decomposition: A Mode Decomposition for Multiple Transport Phenomena.
• 
  Fuhui Fang, Jingfang Huang, Gary A. Huber, James Andrew McCammon, Bo Zhang:
  Hierarchical Orthogonal Matrix Generation and Matrix-Vector Multiplications in Rigid Body Simulations.
• 
  Xin He, Cornelis Vuik, Christiaan M. Klaij:
  Combining the Augmented Lagrangian Preconditioner with the Simple Schur Complement Approximation.
• 
  Tom Gustafsson, Rolf Stenberg, Juha H. Videman:
  A Posteriori Estimates for Conforming Kirchhoff Plate Elements.
• 
  Willem Hundsdorfer, Karel J. in 't Hout:
  On Multistep Stabilizing Correction Splitting Methods with Applications to the Heston Model.
• 
  Qiang Du, Houde Han, Jiwei Zhang, Chunxiong Zheng:
  Numerical Solution of a Two-Dimensional Nonlocal Wave Equation on Unbounded Domains.
• 
  Shu-Lin Wu:
  Toward Parallel Coarse Grid Correction for the Parareal Algorithm.
• 
  James J. Brannick, Fei Cao, Karsten Kahl, Robert D. Falgout, Xiaozhe Hu:
  Optimal Interpolation and Compatible Relaxation in Classical Algebraic Multigrid.
• 
  Yuji Nakatsukasa, Olivier Sète, Lloyd N. Trefethen:
  The AAA Algorithm for Rational Approximation.
• 
  Shucheng Pan, Xiangyu Hu, Nikolaus A. Adams:
  A Consistent Analytical Formulation for Volume Estimation of Geometries Enclosed by Implicitly Defined Surfaces.
• 
  Francesc Pons Llopis, Nikolas Kantas, Alexandros Beskos, Ajay Jasra:
  Particle Filtering for Stochastic Navier-Stokes Signal Observed with Linear Additive Noise.
• 
  Jeffrey M. Hokanson, Paul G. Constantine:
  Data-Driven Polynomial Ridge Approximation Using Variable Projection.
• 
  Krzysztof Domino, Piotr Gawron, Lukasz Pawela:
  Efficient Computation of Higher-Order Cumulant Tensors.
• 
  Manuel Baumann, Peter Benner, Jan Heiland:
  Space-Time Galerkin POD with Application in Optimal Control of Semilinear Partial Differential Equations.
• 
  Matthias Bolten, Hannah Rittich:
  Fourier Analysis of Periodic Stencils in Multigrid Methods.
• 
  Saviz Mowlavi, Themistoklis P. Sapsis:
  Model Order Reduction for Stochastic Dynamical Systems with Continuous Symmetries.
• 
  Awad H. Al-Mohy:
  A Truncated Taylor Series Algorithm for Computing the Action of Trigonometric and Hyperbolic Matrix Functions.
• 
  Christophe Gomez, Olivier Pinaud:
  Monte Carlo Methods for Radiative Transfer with Singular Kernels.
• 
  Daria A. Sushnikova, Ivan V. Oseledets:
  "Compress and Eliminate" Solver for Symmetric Positive Definite Sparse Matrices.
• 
  Chung-Ki Cho, Byungjoon Lee, Seongjai Kim:
  Dual-Mesh Characteristics for Particle-Mesh Methods for the Simulation of Convection-Dominated Flows.
• 
  Raul Borsche, Axel Klar:
  Kinetic Layers and Coupling Conditions for Macroscopic Equations on Networks I: The Wave Equation.
• 
  Fei Xue:
  A Block Preconditioned Harmonic Projection Method for Large-Scale Nonlinear Eigenvalue Problems.
• 
  Marica Pelanti:
  Wave Structure Similarity of the HLLC and Roe Riemann Solvers: Application to Low Mach Number Preconditioning.
• 
  H. V. R. Mittal, Rajendra K. Ray:
  Solving Immersed Interface Problems Using a New Interfacial Points-Based Finite Difference Approach.
• 
  Ron Estrin, Chen Greif:
  SPMR: A Family of Saddle-Point Minimum Residual Solvers.
• 
  Jeffrey S. Ovall, Samuel E. Reynolds:
  A High-Order Method for Evaluating Derivatives of Harmonic Functions in Planar Domains.
• 
  Ali Abdi, Seyyed Ahmad Hosseini:
  The Barycentric Rational Difference-Quadrature Scheme for Systems of Volterra Integro-differential Equations.

Computational Methods in Science and Engineering

• 
  Nuutti Hyvönen, Lauri Mustonen:
  Thermal Tomography with Unknown Boundary.
• 
  Gijs L. Kooij, Mike A. Botchev, Bernard J. Geurts:
  An Exponential Time Integrator for the Incompressible Navier-Stokes Equation.
• 
  Zhenning Cai, Jianfeng Lu:
  A Quantum Kinetic Monte Carlo Method for Quantum Many-Body Spin Dynamics.
• 
  Edward G. Phillips, John N. Shadid, Eric C. Cyr:
  Scalable Preconditioners for Structure Preserving Discretizations of Maxwell Equations in First Order Form.
• 
  Jean-Frédéric Gerbeau, Damiano Lombardi, Eliott Tixier:
  A Moment-Matching Method to Study the Variability of Phenomena Described by Partial Differential Equations.
• 
  Kevin T. Joyce, Johnathan M. Bardsley, Aaron Luttman:
  Point Spread Function Estimation in X-Ray Imaging with Partially Collapsed Gibbs Sampling.
• 
  Georgios Arampatzis, Daniel Wälchli, Panagiotis Angelikopoulos, Stephen Wu, Panagiotis E. Hadjidoukas, Petros Koumoutsakos:
  Langevin Diffusion for Population Based Sampling with an Application in Bayesian Inference for Pharmacodynamics.
• 
  Colin Ponce, David Bindel, Panayot S. Vassilevski:
  A Nonlinear Algebraic Multigrid Framework for the Power Flow Equations.
• 
  Xuping Xie, Muhammad Mohebujjaman, Leo G. Rebholz, Traian Iliescu:
  Data-Driven Filtered Reduced Order Modeling of Fluid Flows.
• 
  Lars König, Jan Rühaak, Alexander Derksen, Jan Lellmann:
  A Matrix-Free Approach to Parallel and Memory-Efficient Deformable Image Registration.
• 
  Xiaofeng Yang, Haijun Yu:
  Efficient Second Order Unconditionally Stable Schemes for a Phase Field Moving Contact Line Model Using an Invariant Energy Quadratization Approach.
• 
  Bo Zhang, Ruming Zhang:
  An FFT-based Algorithm for Efficient Computation of Green's Functions for the Helmholtz and Maxwell's Equations in Periodic Domains.
• 
  Leonardo Zepeda-Núñez, Laurent Demanet:
  Nested Domain Decomposition with Polarized Traces for the 2D Helmholtz Equation.
• 
  Arthur Bousquet, Xiaozhe Hu, Maximilian S. Metti, Jinchao Xu:
  Newton Solvers for Drift-Diffusion and Electrokinetic Equations.

Software and High-Performance Computing

• 
  Robert Dyja, Baskar Ganapathysubramanian, Kristoffer G. van der Zee:
  Parallel-In-Space-Time, Adaptive Finite Element Framework for Nonlinear Parabolic Equations.
• 
  Jianyu Huang, Devin A. Matthews, Robert A. van de Geijn:
  Strassen's Algorithm for Tensor Contraction.
• 
  Paul Houston, Nathan Sime:
  Automatic Symbolic Computation for Discontinuous Galerkin Finite Element Methods.
• 
  Florian Schornbaum, Ulrich Rüde:
  Extreme-Scale Block-Structured Adaptive Mesh Refinement.
• 
  Martin Neumüller, Andreas Thalhammer:
  A Fully Parallelizable Space-Time Multilevel Monte Carlo Method for Stochastic Differential Equations with Additive Noise.
• 
  Miklós Homolya, Lawrence Mitchell, Fabio Luporini, David A. Ham:
  TSFC: A Structure-Preserving Form Compiler.

Volume 40, Number 4, 2018

Methods and Algorithms for Scientific Computing

• 
  Montacer Essid, Justin Solomon:
  Quadratically Regularized Optimal Transport on Graphs. A1961-A1986
• 
  James L. Hook, Jennifer A. Scott, Françoise Tisseur, Jonathan D. Hogg:
  A Max-Plus Approach to Incomplete Cholesky Factorization Preconditioners. A1987-A2004
• 
  Lei-Hong Zhang, Chungen Shen:
  A Nested Lanczos Method for the Trust-Region Subproblem. A2005-A2032
• 
  Vahid Keshavarzzadeh, Robert M. Kirby, Akil Narayan:
  Numerical Integration in Multiple Dimensions with Designed Quadrature. A2033-A2061
• 
  Jian Huang, Yuling Jiao, Xiliang Lu, Liping Zhu:
  Robust Decoding from 1-Bit Compressive Sampling with Ordinary and Regularized Least Squares. A2062-A2086
• 
  Hao Wang, Mingjie Liao, Ping Lin, Lei Zhang:
  A Posteriori Error Estimation and Adaptive Algorithm for Atomistic/Continuum Coupling in Two Dimensions. A2087-A2119
• 
  Andreas Buhr, Kathrin Smetana:
  Randomized Local Model Order Reduction. A2120-A2151
• 
  Dongkun Zhang, Hessam Babaee, George E. Karniadakis:
  Stochastic Domain Decomposition via Moment Minimization. A2152-A2173
• 
  Xiaojun Chen, C. T. Kelley, Fengmin Xu, Zaikun Zhang:
  A Smoothing Direct Search Method for Monte Carlo-Based Bound Constrained Composite Nonsmooth Optimization. A2174-A2199
• 
  Alejandro Allendes, Enrique Otárola, Richard Rankin:
  A Posteriori Error Estimation for a PDE-Constrained Optimization Problem Involving the Generalized Oseen Equations. A2200-A2233
• 
  Geoffrey Dillon, Vassilis Kalantzis, Yuanzhe Xi, Yousef Saad:
  A Hierarchical Low Rank Schur Complement Preconditioner for Indefinite Linear Systems. A2234-A2252
• 
  Zlatko Drmac, Igor Mezic, Ryan Mohr:
  Data Driven Modal Decompositions: Analysis and Enhancements. A2253-A2285
• 
  Ruming Zhang:
  A High Order Numerical Method for Scattering from Locally Perturbed Periodic Surfaces. A2286-A2314
• 
  Jeremie Houssineau, Ajay Jasra, Sumeetpal S. Singh:
  Multilevel Monte Carlo for Smoothing via Transport Methods. A2315-A2335
• 
  Kuan Xu, Ana F. Loureiro:
  Spectral Approximation of Convolution Operators. A2336-A2355
• 
  Alberto Paganini, Florian Wechsung, Patrick E. Farrell:
  Higher-Order Moving Mesh Methods for PDE-Constrained Shape Optimization. A2356-A2382
• 
  Mark Ainsworth, Christian Glusa:
  Hybrid Finite Element-Spectral Method for the Fractional Laplacian: Approximation Theory and Efficient Solver. A2383-A2405
• 
  Axel Målqvist, Anna Persson, Tony Stillfjord:
  Multiscale Differential Riccati Equations for Linear Quadratic Regulator Problems. A2406-A2426
• 
  Silviu-Ioan Filip, Yuji Nakatsukasa, Lloyd N. Trefethen, Bernhard Beckermann:
  Rational Minimax Approximation via Adaptive Barycentric Representations. A2427-A2455
• 
  Nicholas Hale, Sheehan Olver:
  A Fast and Spectrally Convergent Algorithm for Rational-Order Fractional Integral and Differential Equations. A2456-A2491
• 
  Maxim A. Olshanskii, Annalisa Quaini, Arnold Reusken, Vladimir Yushutin:
  A Finite Element Method for the Surface Stokes Problem. A2492-A2518
• 
  Jehanzeb Hameed Chaudhry:
  A Posteriori Analysis and Efficient Refinement Strategies for the Poisson-Boltzmann Equation. A2519-A2542
• 
  Lina Zhao, Eun-Jae Park:
  A Staggered Discontinuous Galerkin Method of Minimal Dimension on Quadrilateral and Polygonal Meshes. A2543-A2567
• 
  Nicholas D. Brubaker:
  A Continuation Method for Computing Constant Mean Curvature Surfaces with Boundary. A2568-A2583
• 
  Varun Shankar, Robert M. Kirby, Aaron L. Fogelson:
  Robust Node Generation for Mesh-free Discretizations on Irregular Domains and Surfaces. A2584-A2608
• 
  Johan Helsing, Shidong Jiang:
  On Integral Equation Methods for the First Dirichlet Problem of the Biharmonic and Modified Biharmonic Equations in NonSmooth Domains. A2609-A2630
• 
  Andrew J. Christlieb, Xiao Feng, Yan Jiang, Qi Tang:
  A High-Order Finite Difference WENO Scheme for Ideal Magnetohydrodynamics on Curvilinear Meshes. A2631-A2666
• 
  Howard C. Elman, David J. Silvester:
  Collocation Methods for Exploring Perturbations in Linear Stability Analysis. A2667-A2693
• 
  Mark S. Gockenbach, Elaheh Gorgin:
  On the Convergence of a Heuristic Parameter Choice Rule for Tikhonov Regularization. A2694-A2719
• 
  Yat Tin Chow, Kazufumi Ito, Jun Zou:
  A Time-Dependent Direct Sampling Method for Recovering Moving Potentials in a Heat Equation. A2720-A2748
• 
  Yuanzhe Xi, Ruipeng Li, Yousef Saad:
  Fast Computation of Spectral Densities for Generalized Eigenvalue Problems. A2749-A2773
• 
  Reiichiro Kawai:
  Optimizing Adaptive Importance Sampling by Stochastic Approximation. A2774-A2800

Computational Methods in Science and Engineering

• 
  Josef A. Sifuentes, Shari Moskow:
  Preconditioning Methods for Thin Scattering Structures Based on Asymptotic Results. B1007-B1019
• 
  Daniel Anderson, Jérôme Droniou:
  An Arbitrary-Order Scheme on Generic Meshes for Miscible Displacements in Porous Media. B1020-B1054
• 
  Maria Strazzullo, Francesco Ballarin, Renzo Mosetti, Gianluigi Rozza:
  Model Reduction for Parametrized Optimal Control Problems in Environmental Marine Sciences and Engineering. B1055-B1079
• 
  Lars Ruthotto, Julianne Chung, Matthias Chung:
  Optimal Experimental Design for Inverse Problems with State Constraints. B1080-B1100
• 
  Pengliang Yang, Romain Brossier, Ludovic Métivier, Jean Virieux, Wei Zhou:
  A Time-Domain Preconditioned Truncated Newton Approach to Visco-acoustic Multiparameter Full Waveform Inversion. B1101-B1130
• 
  Samaneh Khodayari-Samghabadi, Sayed Hodjatollah Momeni-Masuleh:
  Implicit-Modal Discontinuous Galerkin Scheme for Two-Phase Flow with Discontinuous Capillary Pressure. B1131-B1160
• 
  Marylesa Howard, Margaret C. Hock, B. T. Meehan, Leora Dresselhaus-Cooper:
  A Locally Adapting Technique for Edge Detection using Image Segmentation. B1161-B1179
• 
  Yingwei Wang, Wenrui Hao, Guang Lin:
  Two-Level Spectral Methods for Nonlinear Elliptic Equations with Multiple Solutions. B1180-B1205
• 
  Meng Zhao, Xiaofan Li, Wenjun Ying, Andrew Belmonte, John S. Lowengrub, Shuwang Li:
  Computation of a Shrinking Interface in a Hele-Shaw Cell. B1206-B1228

Software and High-Performance Computing

• 
  Felix Gremse, Kerstin Küpper, Uwe Naumann:
  Memory-Efficient Sparse Matrix-Matrix Multiplication by Row Merging on Many-Core Architectures. C429-C449
• 
  Gerald Collom, Colin Redman, Robert W. Robey:
  Fast Mesh-to-Mesh Remaps Using Hash Algorithms. C450-C476
• 
  Vassilis Kalantzis, Yuanzhe Xi, Yousef Saad:
  Beyond Automated Multilevel Substructuring: Domain Decomposition with Rational Filtering. C477-C502
• 
  Hartwig Anzt, Edmond Chow, Jack J. Dongarra:
  ParILUT - A New Parallel Threshold ILU Factorization. C503-C519
• 
  Andres Contreras, Paul Mycek, Olivier P. Le Maître, Francesco Rizzi, Bert J. Debusschere, Omar M. Knio:
  Parallel Domain Decomposition Strategies for Stochastic Elliptic Equations. Part A: Local Karhunen-Loève Representations. C520-C546
• 
  Andres Contreras, Paul Mycek, Olivier P. Le Maître, Francesco Rizzi, Bert J. Debusschere, Omar M. Knio:
  Parallel Domain Decomposition Strategies for Stochastic Elliptic Equations Part B: Accelerated Monte Carlo Sampling with Local PC Expansions. C547-C580
• 
  Andrew Reisner, Luke N. Olson, J. David Moulton:
  Scaling Structured Multigrid to 500K+ Cores Through Coarse-Grid Redistribution. C581-C604
• 
  Nela Bosner, Zvonimir Bujanovic, Zlatko Drmac:
  Parallel Solver for Shifted Systems in a Hybrid CPU-GPU Framework. C605-C633
• 
  Byron E. Moutafis, Christos K. Filelis-Papadopoulos, George A. Gravvanis:
  Parallel Schur Complement Techniques Based on Multiprojection Methods. C634-C654

Volume 40, Number 5, 2018

Methods and Algorithms for Scientific Computing

• 
  Pieter Lietaert, Karl Meerbergen, Françoise Tisseur:
  Compact Two-Sided Krylov Methods for Nonlinear Eigenvalue Problems. A2801-A2829
• 
  Sjoerd Geevers, Wim A. Mulder, Jaap J. W. van der Vegt:
  New Higher-Order Mass-Lumped Tetrahedral Elements for Wave Propagation Modelling. A2830-A2857
• 
  Zhenning Cai, Yuwei Fan, Lexing Ying:
  An Entropic Fourier Method for the Boltzmann Equation. A2858-A2882
• 
  Michael M. Crockatt, Andrew J. Christlieb:
  Low-Storage Integral Deferred Correction Methods for Scientific Computing. A2883-A2904
• 
  Severiano González-Pinto, Ernst Hairer, Domingo Hernández-Abreu, Soledad Pérez-Rodríguez:
  AMF-type W-methods for Parabolic Problems with Mixed Derivatives. A2905-A2929
• 
  Amina Benaceur, Virginie Ehrlacher, Alexandre Ern, Sébastien Meunier:
  A Progressive Reduced Basis/Empirical Interpolation Method for Nonlinear Parabolic Problems. A2930-A2955
• 
  Alen Alexanderian, Arvind K. Saibaba:
  Efficient D-Optimal Design of Experiments for Infinite-Dimensional Bayesian Linear Inverse Problems. A2956-A2985
• 
  Fanhai Zeng, Ian W. Turner, Kevin Burrage, George E. Karniadakis:
  A New Class of Semi-Implicit Methods with Linear Complexity for Nonlinear Fractional Differential Equations. A2986-A3011
• 
  Shishun Li, Xinping Shao, Xiao-Chuan Cai:
  Multilevel Space-Time Additive Schwarz Methods for Parabolic Equations. A3012-A3037
• 
  Tigran T. Tchrakian, Sergiy Zhuk:
  A Fast Distributed Data-Assimilation Algorithm for Divergence-Free Advection. A3038-A3066
• 
  Vahan Huroyan, Gilad Lerman:
  Distributed Robust Subspace Recovery. A3067-A3090
• 
  Junyu Zhang, Haoyang Liu, Zaiwen Wen, Shuzhong Zhang:
  A Sparse Completely Positive Relaxation of the Modularity Maximization for Community Detection. A3091-A3120
• 
  Hangrui Yue, Qingzhi Yang, Xiangfeng Wang, Xiaoming Yuan:
  Implementing the Alternating Direction Method of Multipliers for Big Datasets: A Case Study of Least Absolute Shrinkage and Selection Operator. A3121-A3156
• 
  Ngoc Cuong Nguyen, Pablo Fernández, Robert M. Freund, Jaime Peraire:
  Accelerated Residual Methods for the Iterative Solution of Systems of Equations. A3157-A3179
• 
  Silvia Bonettini, Simone Rebegoldi, Valeria Ruggiero:
  Inertial Variable Metric Techniques for the Inexact Forward-Backward Algorithm. A3180-A3210
• 
  Jean-Luc Guermond, Murtazo Nazarov, Bojan Popov, Ignacio Tomas:
  Second-Order Invariant Domain Preserving Approximation of the Euler Equations Using Convex Limiting. A3211-A3239
• 
  Alexander D. Gilbert, Frances Y. Kuo, Dirk Nuyens, Grzegorz W. Wasilkowski:
  Efficient Implementations of the Multivariate Decomposition Method for Approximating Infinite-Variate Integrals. A3240-A3266
• 
  Christian Himpe, Tobias Leibner, Stephan Rave:
  Hierarchical Approximate Proper Orthogonal Decomposition. A3267-A3292
• 
  Wang Kong, Zhongyi Huang:
  Asymptotic Analysis and Numerical Method for Singularly Perturbed Eigenvalue Problems. A3293-A3321
• 
  Xu Guo, Yutian Li, Hong Wang:
  A High Order Finite Difference Method for Tempered Fractional Diffusion Equations with Applications to the CGMY Model. A3322-A3343
• 
  Minghao W. Rostami, Fei Xue:
  Robust Linear Stability Analysis and a New Method for Computing the Action of the Matrix Exponential. A3344-A3370
• 
  X. Wu, Kris G. van der Zee, Görkem Simsek-Senel, E. H. van Brummelen:
  A Posteriori Error Estimation and Adaptivity for Nonlinear Parabolic Equations using IMEX-Galerkin Discretization of Primal and Dual Equations. A3371-A3399
• 
  Evgeny Tenetov, Gershon Wolansky, Ron Kimmel:
  Fast Entropic Regularized Optimal Transport Using Semidiscrete Cost Approximation. A3400-A3422
• 
  Martin Kronbichler, Wolfgang A. Wall:
  A Performance Comparison of Continuous and Discontinuous Galerkin Methods with Fast Multigrid Solvers. A3423-A3448
• 
  Joscha Gedicke, Arbaz Khan:
  Arnold-Winther Mixed Finite Elements for Stokes Eigenvalue Problems. A3449-A3469
• 
  Ronald B. Morgan, Zhao Yang:
  Two-Grid and Multiple-Grid Arnoldi for Eigenvalues. A3470-A3494
• 
  Zhaojun Bai, Ding Lu, Bart Vandereycken:
  Robust Rayleigh Quotient Minimization and Nonlinear Eigenvalue Problems. A3495-A3522
• 
  Troy D. Butler, John D. Jakeman, Tim Wildey:
  Convergence of Probability Densities Using Approximate Models for Forward and Inverse Problems in Uncertainty Quantification. A3523-A3548
• 
  Erin C. Carson, Miroslav Rozlozník, Zdenek Strakos, Petr Tichý, Miroslav Tuma:
  The Numerical Stability Analysis of Pipelined Conjugate Gradient Methods: Historical Context and Methodology. A3549-A3580
• 
  Davide Palitta, Valeria Simoncini:
  Numerical Methods for Large-Scale Lyapunov Equations with Symmetric Banded Data. A3581-A3608
• 
  Peter Benner, Tim Mitchell:
  Faster and More Accurate Computation of the ℋ_∞ Norm via Optimization. A3609-A3635
• 
  Bertrand Gauthier, Johan A. K. Suykens:
  Optimal Quadrature-Sparsification for Integral Operator Approximation. A3636-A3674
• 
  Ernest K. Ryu, Yongxin Chen, Wuchen Li, Stanley J. Osher:
  Vector and Matrix Optimal Mass Transport: Theory, Algorithm, and Applications. A3675-A3698

Computational Methods in Science and Engineering

• 
  Jiangguo Liu, Simon Tavener, Zhuoran Wang:
  Lowest-Order Weak Galerkin Finite Element Method for Darcy Flow on Convex Polygonal Meshes. B1229-B1252
• 
  Yihong Wang, Wenjun Ying, Min Tang:
  Uniformly Convergent Scheme for Strongly Anisotropic Diffusion Equations with Closed Field Lines. B1253-B1276
• 
  Zhenning Cai, Jianfeng Lu:
  A Surface Hopping Gaussian Beam Method for High-Dimensional Transport Systems. B1277-B1301
• 
  Kailiang Wu, Chi-Wang Shu:
  A Provably Positive Discontinuous Galerkin Method for Multidimensional Ideal Magnetohydrodynamics. B1302-B1329
• 
  Lukas Einkemmer, Christian Lubich:
  A Low-Rank Projector-Splitting Integrator for the Vlasov-Poisson Equation. B1330-B1360
• 
  Jonas Sukys, Ursula Rasthofer, Fabian Wermelinger, Panagiotis E. Hadjidoukas, Petros Koumoutsakos:
  Multilevel Control Variates for Uncertainty Quantification in Simulations of Cloud Cavitation. B1361-B1390
• 
  Stefano Giani:
  HP-Adaptive Celatus Enriched Discontinuous Galerkin Method for Second-Order Elliptic Source Problems. B1391-B1418
• 
  Aleksandr Y. Aravkin, James V. Burke, Gianluigi Pillonetto:
  Generalized System Identification with Stable Spline Kernels. B1419-B1443
• 
  Susanne Claus, Samuel Bigot, Pierre Kerfriden:
  CutFEM Method for Stefan-Signorini Problems with Application in Pulsed Laser Ablation. B1444-B1469
• 
  Artur Safin, Susan E. Minkoff, John Zweck:
  A Preconditioned Finite Element Solution of the Coupled Pressure-Temperature Equations Used to Model Trace Gas Sensors. B1470-B1493

Software and High-Performance Computing

• 
  Jed A. Duersch, Meiyue Shao, Chao Yang, Ming Gu:
  A Robust and Efficient Implementation of LOBPCG. C655-C676

Volume 40, Number 6, 2018

Methods and Algorithms for Scientific Computing

• 
  Bao-Shan Wang, Wai-Sun Don, Z. Gao, Y. H. Wang, X. Wen:
  Hybrid Compact-WENO Finite Difference Scheme with Radial Basis Function Based Shock Detection Method for Hyperbolic Conservation Laws. A3699-A3714
• 
  Matt Wala, Andreas Klöckner:
  Conformal Mapping via a Density Correspondence for the Double-Layer Potential. A3715-A3732
• 
  Leslie Greengard, Shidong Jiang, Yong Zhang:
  The Anisotropic Truncated Kernel Method for Convolution with Free-Space Green's Functions. A3733-A3754
• 
  Qinghai Zhang:
  Fourth- and Higher-order Interface Tracking Via Mapping and Adjusting Regular Semianalytic sets Represented by Cubic Splines. A3755-A3788
• 
  Elena Celledoni, Sølve Eidnes, Brynjulf Owren, Torbjørn Ringholm:
  Dissipative Numerical Schemes on Riemannian Manifolds with Applications to Gradient Flows. A3789-A3806
• 
  José A. Iglesias, Kevin Sturm, Florian Wechsung:
  Two-Dimensional Shape Optimization with Nearly Conformal Transformations. A3807-A3830
• 
  Kim Ngan Le, William McLean, Kassem Mustapha:
  A Semidiscrete Finite Element Approximation of a Time-Fractional Fokker-Planck Equation with NonSmooth Initial Data. A3831-A3852
• 
  Martin Alkämper, Fernando Gaspoz, Robert Klöfkorn:
  A Weak Compatibility Condition for Newest Vertex Bisection in Any Dimension. A3853-A3872
• 
  Jean-Luc Guermond, Manuel Quezada de Luna, Bojan Popov, Christopher E. Kees, Matthew W. Farthing:
  Well-Balanced Second-Order Finite Element Approximation of the Shallow Water Equations with Friction. A3873-A3901
• 
  Daniel Appelö, Thomas M. Hagstrom, Arturo Vargas:
  Hermite Methods for the Scalar Wave Equation. A3902-A3927
• 
  Karsten Kahl, Matthias Rottmann:
  Least Angle Regression Coarsening in Bootstrap Algebraic Multigrid. A3928-A3954
• 
  Christophe Chalons, Régis Duvigneau, Camilla Fiorini:
  Sensitivity Analysis and Numerical Diffusion Effects for Hyperbolic PDE Systems with Discontinuous Solutions. The Case of Barotropic Euler Equations in Lagrangian Coordinates. A3955-A3981
• 
  Qing Cheng, Jie Shen:
  Multiple Scalar Auxiliary Variable (MSAV) Approach and its Application to the Phase-Field Vesicle Membrane Model. A3982-A4006
• 
  Marco Donatelli, Mariarosa Mazza, Stefano Serra-Capizzano:
  Spectral Analysis and Multigrid Methods for Finite Volume Approximations of Space-Fractional Diffusion Equations. A4007-A4039
• 
  Noel Chalmers, Timothy C. Warburton:
  Low-Order Preconditioning of High-Order Triangular Finite Elements. A4040-A4059
• 
  Prashanth Nadukandi, Nicholas J. Higham:
  Computing the Wave-Kernel Matrix Functions. A4060-A4082
• 
  Buyang Li, Jiwei Zhang, Chunxiong Zheng:
  Stability and Error Analysis for a Second-Order Fast Approximation of the One-dimensional Schrödinger Equation Under Absorbing Boundary Conditions. A4083-A4104
• 
  Thomas A. Manteuffel, John W. Ruge, Ben S. Southworth:
  Nonsymmetric Algebraic Multigrid Based on Local Approximate Ideal Restriction (ℓAIR). A4105-A4130
• 
  Yongfeng Li, Zaiwen Wen, Chao Yang, Ya-Xiang Yuan:
  A SemiSmooth Newton Method for Semidefinite Programs and its Applications in Electronic Structure Calculations. A4131-A4157
• 
  Axel Kröner, Eva Kröner, Heiko Kröner:
  Finite Element Approximation of Level Set Motion by Powers of the Mean Curvature. A4158-A4183
• 
  Donsub Rim:
  Dimensional Splitting of Hyperbolic Partial Differential Equations Using the Radon Transform. A4184-A4207
• 
  Qichen Hong, Hehu Xie, Fei Xu:
  A Multilevel Correction Type of Adaptive Finite Element Method for Eigenvalue Problems. A4208-A4235

Computational Methods in Science and Engineering

• 
  Timothy Reis:
  A Conservative Interface Sharpening Lattice Boltzmann Model. B1495-B1516
• 
  Afnan Al Marzouk, Béla Erdélyi:
  Collisional N-Body Numerical Integrator with Applications to Charged Particle Dynamics. B1517-B1540
• 
  Santiago Badia, Alberto F. Martín, Francesc Verdugo:
  Mixed Aggregated Finite Element Methods for the Unfitted Discretization of the Stokes Problem. B1541-B1576

Software and High-Performance Computing

• 
  Juan C. Cajas, Guillaume Houzeaux, Mariano Vázquez, Marta García, Eva Casoni, Hadrien Calmet, Antoni Artigues, Ricard Borrell, Oriol Lehmkuhl, Daniel Pastrana, D. J. Yánez, R. Pons, Jordi Martorell:
  Fluid-Structure Interaction Based on HPC Multicode Coupling. C677-C703
• 
  Frédéric Magoulès, Guillaume Gbikpi-Benissan:
  Asynchronous Parareal Time Discretization For Partial Differential Equations. C704-C725
• 
  Fredrik Johansson, Marc Mezzarobba:
  Fast and Rigorous Arbitrary-Precision Computation of Gauss-Legendre Quadrature Nodes and Weights. C726-C747
• 
  Simon Bauer, Daniel Drzisga, Marcus Mohr, Ulrich Rüde, Christian Waluga, Barbara I. Wohlmuth:
  A Stencil Scaling Approach for Accelerating Matrix-Free Finite Element Implementations. C748-C778
• 
  Justin Chang, Maurice S. Fabien, Matthew G. Knepley, Richard Tran Mills:
  Comparative Study of Finite Element Methods Using the Time-Accuracy-Size(TAS) Spectrum Analysis. C779-C802
• 
  Svenja Schoeder, Katharina Kormann, Wolfgang A. Wall, Martin Kronbichler:
  Efficient Explicit Time Stepping of High Order Discontinuous Galerkin Schemes for Waves. C803-C826
• 
  Fahreddin Sükrü Torun, Murat Manguoglu, Cevdet Aykanat:
  A Novel Partitioning Method for Accelerating the Block Cimmino Algorithm. C827-C850