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Theory in Biosciences, Volume 131
Volume 131, Number 1, May 2012
- Pawel Mackiewicz, Andrzej Bodyl, Przemyslaw Gagat

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Possible import routes of proteins into the cyanobacterial endosymbionts/plastids of Paulinella chromatophora. 1-18 - Mohammad A. Safi

, Mudassar Imran
, Abba B. Gumel
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Threshold dynamics of a non-autonomous SEIRS model with quarantine and isolation. 19-30 - Jana Svorcová

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The phylotypic stage as a boundary of modular memory: non mechanistic perspective. 31-42 - Frederick B. Reitz

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A "lookup table" schema for synthetic biological patterning. 43-47 - Jan Engelhardt, Peter F. Stadler

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Hidden treasures in unspliced EST data. 49-57
Volume 131, Number 2, June 2012
- Markus Kirkilionis

, Fatihcan M. Atay
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Introduction to Special Issue ECCS'10 in Theory in Biosciences. 59-60 - Susan Khor:

Towards an integrated understanding of the structural characteristics of protein residue networks. 61-75 - André Machado Lindo, Bruno Filipe Faria, Fernão Vístulo de Abreu

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Tunable kinetic proofreading in a model with molecular frustration. 77-84 - Alessandro Filisetti

, Alex Graudenzi
, Roberto Serra
, Marco Villani
, Rudolf M. Füchslin, Norman H. Packard, Stuart A. Kauffman, Irene Poli:
A stochastic model of autocatalytic reaction networks. 85-93 - Alina Sîrbu

, Heather J. Ruskin, Martin Crane
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Integrating heterogeneous gene expression data for gene regulatory network modelling. 95-102 - Maciej Komosinski

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Measuring quantities using oscillators and pulse generators. 103-116 - J. T. Trevors, Gerald H. Pollack, Milton H. Saier Jr., Luke Masson:

Transformative research: definitions, approaches and consequences. 117-123
Volume 131, Number 3, September 2012
- Nihat Ay, Ralf Der, Mikhail Prokopenko

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Guided self-organization: perception-action loops of embodied systems. 125-127 - Georg Martius

, J. Michael Herrmann:
Variants of guided self-organization for robot control. 129-137 - Susanne Still, Doina Precup:

An information-theoretic approach to curiosity-driven reinforcement learning. 139-148 - Philippe Capdepuy, Daniel Polani, Chrystopher L. Nehaniv

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Perception-action loops of multiple agents: informational aspects and the impact of coordination. 149-159 - Nihat Ay, Holger Bernigau, Ralf Der, Mikhail Prokopenko

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Information-driven self-organization: the dynamical system approach to autonomous robot behavior. 161-179 - Carlos Gershenson

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Guiding the self-organization of random Boolean networks. 181-191 - Joseph T. Lizier

, Mikhail Prokopenko
, Albert Y. Zomaya
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Coherent information structure in complex computation. 193-203 - Joschka Boedecker

, Oliver Obst
, Joseph T. Lizier
, Norbert Michael Mayer, Minoru Asada:
Information processing in echo state networks at the edge of chaos. 205-213
Volume 131, Number 4, December 2012
- Jitesh Dundas

, Maurice H. T. Ling
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Reference genes for measuring mRNA expression. 215-223 - J. T. Trevors:

Origin of life: hypothesized roles of high-energy electrical discharges, infrared radiation, thermosynthesis and pre-photosynthesis. 225-229 - Geoffrey Guinard

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Evolutionary concepts meet the neck of penguins (Aves: Sphenisciformes), towards a "survival strategy" for evo-devo. 231-242 - Michal Simunek, Uwe Hoßfeld

, Olaf Breidbach:
'Further Development' of Mendel's legacy? Erich von Tschermak-Seysenegg in the context of Mendelian-biometry controversy, 1901-1906. 243-252 - Paula Mariela González

, Doris Abele
, Susana Puntarulo:
A kinetic approach to assess oxidative metabolism related features in the bivalve Mya arenaria. 253-264 - Mohammad Mahdi Najafpour:

Biomineralization: a proposed evolutionary origin for inorganic cofactors of enzymes. 265-272 - Laureano Castro

, Miguel A. Toro
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Imitation or innovation? Unselective mixed strategies can provide a better solution. 273-279 - Günter P. Wagner

, Koryu Kin
, Vincent J. Lynch
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Measurement of mRNA abundance using RNA-seq data: RPKM measure is inconsistent among samples. 281-285

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