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ORCIDBibTeX records: Carlos Caldas
@article{DBLP:journals/cmpb/EijnattenRBLBCG21,
author = {Maureen van Eijnatten and
Leonardo Rundo and
Kees Joost Batenburg and
Felix Lucka and
Emma Beddowes and
Carlos Caldas and
Ferdia A. Gallagher and
Evis Sala and
Carola{-}Bibiane Sch{\"{o}}nlieb and
Ramona Woitek},
title = {3D deformable registration of longitudinal abdominopelvic {CT} images
using unsupervised deep learning},
journal = {Comput. Methods Programs Biomed.},
volume = {208},
pages = {106261},
year = {2021},
url = {https://doi.org/10.1016/j.cmpb.2021.106261},
doi = {10.1016/J.CMPB.2021.106261},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/cmpb/EijnattenRBLBCG21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2005-07545,
author = {Maureen van Eijnatten and
Leonardo Rundo and
Kees Joost Batenburg and
Felix Lucka and
Emma Beddowes and
Carlos Caldas and
Ferdia A. Gallagher and
Evis Sala and
Carola{-}Bibiane Sch{\"{o}}nlieb and
Ramona Woitek},
title = {3D deformable registration of longitudinal abdominopelvic {CT} images
using unsupervised deep learning},
journal = {CoRR},
volume = {abs/2005.07545},
year = {2020},
url = {https://arxiv.org/abs/2005.07545},
eprinttype = {arXiv},
eprint = {2005.07545},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2005-07545.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nature/RuedaSSCCCBPBAP19,
author = {Oscar M. Rueda and
Stephen John Sammut and
Jos{\'{e}} A. Seoane and
Suet{-}Feung Chin and
Jennifer L. Caswell{-}Jin and
Maurizio Callari and
Rajbir Nath Batra and
Bernard Pereira and
Alejandra Bruna and
H. Raza Ali and
Elena Provenzano and
Bin Liu and
Michelle Parisien and
Cheryl Gillett and
Steven McKinney and
Andrew R. Green and
Leigh Murphy and
Arnie Purushotham and
Ian O. Ellis and
Paul D. P. Pharoah and
Cristina Rueda and
Samuel Aparicio and
Carlos Caldas and
Christina Curtis},
title = {Dynamics of breast-cancer relapse reveal late-recurring ER-positive
genomic subgroups},
journal = {Nat.},
volume = {567},
number = {7748},
pages = {399--404},
year = {2019},
url = {https://doi.org/10.1038/s41586-019-1007-8},
doi = {10.1038/S41586-019-1007-8},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nature/RuedaSSCCCBPBAP19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/BanerjiSCT15,
author = {Christopher R. S. Banerji and
Simone Severini and
Carlos Caldas and
Andrew E. Teschendorff},
title = {Intra-Tumour Signalling Entropy Determines Clinical Outcome in Breast
and Lung Cancer},
journal = {PLoS Comput. Biol.},
volume = {11},
number = {3},
year = {2015},
url = {https://doi.org/10.1371/journal.pcbi.1004115},
doi = {10.1371/JOURNAL.PCBI.1004115},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/BanerjiSCT15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/MorrisTCHMHDBC13,
author = {Lorna Morris and
Andrew Tsui and
Charles Crichton and
Steve Harris and
Peter Maccallum and
William J. Howat and
Jim Davies and
James D. Brenton and
Carlos Caldas},
title = {A metadata-aware application for remote scoring and exchange of tissue
microarray images},
journal = {{BMC} Bioinform.},
volume = {14},
pages = {147},
year = {2013},
url = {https://doi.org/10.1186/1471-2105-14-147},
doi = {10.1186/1471-2105-14-147},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bmcbi/MorrisTCHMHDBC13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/BilalDGJLPSSVMRTCAKABCCFISSM13,
author = {Erhan Bilal and
Janusz Dutkowski and
Justin Guinney and
In Sock Jang and
Benjamin A. Logsdon and
Gaurav Pandey and
Benjamin A. Sauerwine and
Yishai Shimoni and
Hans Kristian Moen Vollan and
Brigham H. Mecham and
Oscar M. Rueda and
Jorg Tost and
Christina Curtis and
Mariano J. Alvarez and
Vessela N. Kristensen and
Samuel Aparicio and
Anne{-}Lise B{\o}rresen{-}Dale and
Carlos Caldas and
Andrea Califano and
Stephen H. Friend and
Trey Ideker and
Eric E. Schadt and
Gustavo A. Stolovitzky and
Adam A. Margolin},
title = {Improving Breast Cancer Survival Analysis through Competition-Based
Multidimensional Modeling},
journal = {PLoS Comput. Biol.},
volume = {9},
number = {5},
year = {2013},
url = {https://doi.org/10.1371/journal.pcbi.1003047},
doi = {10.1371/JOURNAL.PCBI.1003047},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/BilalDGJLPSSVMRTCAKABCCFISSM13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiuMRCPR12,
author = {Ruijie Liu and
Ana{-}Teresa Maia and
Roslin Russell and
Carlos Caldas and
Bruce A. Ponder and
Matthew E. Ritchie},
title = {Allele-specific expression analysis methods for high-density {SNP}
microarray data},
journal = {Bioinform.},
volume = {28},
number = {8},
pages = {1102--1108},
year = {2012},
url = {https://doi.org/10.1093/bioinformatics/bts089},
doi = {10.1093/BIOINFORMATICS/BTS089},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/LiuMRCPR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tcbb/YuanCCM12,
author = {Yinyin Yuan and
Christina Curtis and
Carlos Caldas and
Florian Markowetz},
title = {A Sparse Regulatory Network of Copy-Number Driven Gene Expression
Reveals Putative Breast Cancer Oncogenes},
journal = {{IEEE} {ACM} Trans. Comput. Biol. Bioinform.},
volume = {9},
number = {4},
pages = {947--954},
year = {2012},
url = {https://doi.org/10.1109/TCBB.2011.105},
doi = {10.1109/TCBB.2011.105},
timestamp = {Mon, 03 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tcbb/YuanCCM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bibm/YuanCCM10,
author = {Yinyin Yuan and
Christina Curtis and
Carlos Caldas and
Florian Markowetz},
editor = {Taesung Park and
Stephen Kwok{-}Wing Tsui and
Luonan Chen and
Michael K. Ng and
Limsoon Wong and
Xiaohua Hu},
title = {A sparse regulatory network of copy-number driven expression reveals
putative breast cancer oncogenes},
booktitle = {2010 {IEEE} International Conference on Bioinformatics and Biomedicine,
{BIBM} 2010, Hong Kong, China, December 18-21, 2010, Proceedings},
pages = {473--478},
publisher = {{IEEE} Computer Society},
year = {2010},
url = {https://doi.org/10.1109/BIBM.2010.5706612},
doi = {10.1109/BIBM.2010.5706612},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bibm/YuanCCM10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ccgrid/ZangCHTKGDMC08,
author = {Tianyi Zang and
Radu Calinescu and
Steve Harris and
Andrew Tsui and
Marta Z. Kwiatkowska and
Jeremy Gibbons and
Jim Davies and
Peter Maccallum and
Carlos Caldas},
title = {WSRF-Based Modeling of Clinical Trial Information for Collaborative
Cancer Research},
booktitle = {8th {IEEE} International Symposium on Cluster Computing and the Grid
(CCGrid 2008), 19-22 May 2008, Lyon, France},
pages = {73--81},
publisher = {{IEEE} Computer Society},
year = {2008},
url = {https://doi.org/10.1109/CCGRID.2008.57},
doi = {10.1109/CCGRID.2008.57},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ccgrid/ZangCHTKGDMC08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eScience/ZangCHTCKGDBC08,
author = {Tianyi Zang and
Radu Calinescu and
Steve Harris and
Andrew Tsui and
Charles Crichton and
Marta Z. Kwiatkowska and
Jeremy Gibbons and
Jim Davies and
James D. Brenton and
Carlos Caldas},
title = {Metamodel-Based Generation of WSRF-Compliant {SOA} for Collaborative
Cancer Research},
booktitle = {Fourth International Conference on e-Science, e-Science 2008, 7-12
December 2008, Indianapolis, IN, {USA}},
pages = {406--407},
publisher = {{IEEE} Computer Society},
year = {2008},
url = {https://doi.org/10.1109/eScience.2008.129},
doi = {10.1109/ESCIENCE.2008.129},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/eScience/ZangCHTCKGDBC08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/TeschendorffJASC07,
author = {Andrew E. Teschendorff and
Michel Journ{\'{e}}e and
Pierre{-}Antoine Absil and
Rodolphe Sepulchre and
Carlos Caldas},
title = {Elucidating the Altered Transcriptional Programs in Breast Cancer
using Independent Component Analysis},
journal = {PLoS Comput. Biol.},
volume = {3},
number = {8},
year = {2007},
url = {https://doi.org/10.1371/journal.pcbi.0030161},
doi = {10.1371/JOURNAL.PCBI.0030161},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/TeschendorffJASC07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TeschendorffNBC06,
author = {Andrew E. Teschendorff and
Ali Naderi and
Nuno L. Barbosa{-}Morais and
Carlos Caldas},
title = {{PACK:} Profile Analysis using Clustering and Kurtosis to find molecular
classifiers in cancer},
journal = {Bioinform.},
volume = {22},
number = {18},
pages = {2269--2275},
year = {2006},
url = {https://doi.org/10.1093/bioinformatics/btl174},
doi = {10.1093/BIOINFORMATICS/BTL174},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TeschendorffNBC06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/TeschendorffWBBC05,
author = {Andrew E. Teschendorff and
Yanzhong Wang and
Nuno L. Barbosa{-}Morais and
James D. Brenton and
Carlos Caldas},
title = {A variational Bayesian mixture modelling framework for cluster analysis
of gene-expression data},
journal = {Bioinform.},
volume = {21},
number = {13},
pages = {3025--3033},
year = {2005},
url = {https://doi.org/10.1093/bioinformatics/bti466},
doi = {10.1093/BIOINFORMATICS/BTI466},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/TeschendorffWBBC05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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