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ORCIDBibTeX records: Sune Darkner
@article{DBLP:journals/access/XuGMDE23,
author = {Peidi Xu and
Torkan Gholamalizadeh and
Faezeh Moshfeghifar and
Sune Darkner and
Kenny Erleben},
title = {Deep-Learning-Based Segmentation of Individual Tooth and Bone With
Periodontal Ligament Interface Details for Simulation Purposes},
journal = {{IEEE} Access},
volume = {11},
pages = {102460--102470},
year = {2023},
url = {https://doi.org/10.1109/ACCESS.2023.3317512},
doi = {10.1109/ACCESS.2023.3317512},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/access/XuGMDE23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/LyuYCEDY23,
author = {Fei Lyu and
Mang Ye and
Jonathan Frederik Carlsen and
Kenny Erleben and
Sune Darkner and
Pong C. Yuen},
title = {Pseudo-Label Guided Image Synthesis for Semi-Supervised {COVID-19}
Pneumonia Infection Segmentation},
journal = {{IEEE} Trans. Medical Imaging},
volume = {42},
number = {3},
pages = {797--809},
year = {2023},
url = {https://doi.org/10.1109/TMI.2022.3217501},
doi = {10.1109/TMI.2022.3217501},
timestamp = {Sat, 11 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tmi/LyuYCEDY23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/LuYEND23,
author = {Jiahao Lu and
Chong Yin and
Kenny Erleben and
Michael Bachmann Nielsen and
Sune Darkner},
title = {cRedAnno+: Annotation Exploitation In Self-Explanatory Lung Nodule
Diagnosis},
booktitle = {20th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
2023, Cartagena, Colombia, April 18-21, 2023},
pages = {1--5},
publisher = {{IEEE}},
year = {2023},
url = {https://doi.org/10.1109/ISBI53787.2023.10230720},
doi = {10.1109/ISBI53787.2023.10230720},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbi/LuYEND23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/XuLSSED23,
author = {Peidi Xu and
Blaire Lee and
Olga V. Sosnovtseva and
Charlotte Mehlin S{\o}rensen and
Kenny Erleben and
Sune Darkner},
editor = {Zhiyun Xue and
Sameer K. Antani and
Ghada Zamzmi and
Feng Yang and
Sivaramakrishnan Rajaraman and
Sharon Xiaolei Huang and
Marius George Linguraru and
Zhaohui Liang},
title = {Extremely Weakly-Supervised Blood Vessel Segmentation with Physiologically
Based Synthesis and Domain Adaptation},
booktitle = {Medical Image Learning with Limited and Noisy Data - Second International
Workshop, MILLanD 2023, Held in Conjunction with {MICCAI} 2023, Vancouver,
BC, Canada, October 8, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14307},
pages = {191--201},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-3-031-44917-8\_18},
doi = {10.1007/978-3-031-44917-8\_18},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/miccai/XuLSSED23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2303-01837,
author = {Peidi Xu and
Niels{-}Henrik Holstein{-}Rathlou and
Stinne Byrholdt S{\o}gaard and
Carsten Gundlach and
Charlotte Mehlin S{\o}rensen and
Kenny Erleben and
Olga V. Sosnovtseva and
Sune Darkner},
title = {A Hybrid Approach to Full-Scale Reconstruction of Renal Arterial Network},
journal = {CoRR},
volume = {abs/2303.01837},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2303.01837},
doi = {10.48550/ARXIV.2303.01837},
eprinttype = {arXiv},
eprint = {2303.01837},
timestamp = {Mon, 06 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2303-01837.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2303-16903,
author = {Rasmus Netterstr{\o}m and
Nikolay Kutuzov and
Sune Darkner and
Maurits J{\o}rring Pallesen and
Martin Johannes Lauritzen and
Kenny Erleben and
Fran{\c{c}}ois Lauze},
title = {Deep Learning-Assisted Localisation of Nanoparticles in synthetically
generated two-photon microscopy images},
journal = {CoRR},
volume = {abs/2303.16903},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2303.16903},
doi = {10.48550/ARXIV.2303.16903},
eprinttype = {arXiv},
eprint = {2303.16903},
timestamp = {Thu, 13 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2303-16903.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2304-04606,
author = {Abraham George Smith and
Denis Kutn{\'{a}}r and
Ivan Richter Vogelius and
Sune Darkner and
Jens Petersen},
title = {Localise to segment: crop to improve organ at risk segmentation accuracy},
journal = {CoRR},
volume = {abs/2304.04606},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2304.04606},
doi = {10.48550/ARXIV.2304.04606},
eprinttype = {arXiv},
eprint = {2304.04606},
timestamp = {Thu, 20 Apr 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2304-04606.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2305-17054,
author = {Peidi Xu and
Olga V. Sosnovtseva and
Charlotte Mehlin S{\o}rensen and
Kenny Erleben and
Sune Darkner},
title = {Extremely weakly-supervised blood vessel segmentation with physiologically
based synthesis and domain adaptation},
journal = {CoRR},
volume = {abs/2305.17054},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2305.17054},
doi = {10.48550/ARXIV.2305.17054},
eprinttype = {arXiv},
eprint = {2305.17054},
timestamp = {Tue, 06 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2305-17054.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cmpb/GholamalizadehM22,
author = {Torkan Gholamalizadeh and
Faezeh Moshfeghifar and
Zachary Ferguson and
Teseo Schneider and
Daniele Panozzo and
Sune Darkner and
Masrour Makaremi and
Fran{\c{c}}ois Chan and
Peter Lempel S{\o}ndergaard and
Kenny Erleben},
title = {Open-Full-Jaw: An open-access dataset and pipeline for finite element
models of human jaw},
journal = {Comput. Methods Programs Biomed.},
volume = {224},
pages = {107009},
year = {2022},
url = {https://doi.org/10.1016/j.cmpb.2022.107009},
doi = {10.1016/J.CMPB.2022.107009},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cmpb/GholamalizadehM22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cmpb/MoshfeghifarGFS22,
author = {Faezeh Moshfeghifar and
Torkan Gholamalizadeh and
Zachary Ferguson and
Teseo Schneider and
Michael Bachmann Nielsen and
Daniele Panozzo and
Sune Darkner and
Kenny Erleben},
title = {LibHip: An open-access hip joint model repository suitable for finite
element method simulation},
journal = {Comput. Methods Programs Biomed.},
volume = {226},
pages = {107140},
year = {2022},
url = {https://doi.org/10.1016/j.cmpb.2022.107140},
doi = {10.1016/J.CMPB.2022.107140},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cmpb/MoshfeghifarGFS22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/entropy/SporringD22,
author = {Jon Sporring and
Sune Darkner},
title = {Reconstructing Binary Signals from Local Histograms},
journal = {Entropy},
volume = {24},
number = {3},
pages = {433},
year = {2022},
url = {https://doi.org/10.3390/e24030433},
doi = {10.3390/E24030433},
timestamp = {Wed, 27 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/entropy/SporringD22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/fcomp/SporringD22,
author = {Jon Sporring and
Sune Darkner},
title = {An algebra for local histograms},
journal = {Frontiers Comput. Sci.},
volume = {4},
year = {2022},
url = {https://doi.org/10.3389/fcomp.2022.939563},
doi = {10.3389/FCOMP.2022.939563},
timestamp = {Mon, 26 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/fcomp/SporringD22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jmiv/JensenLD22,
author = {Henrik G. Jensen and
Fran{\c{c}}ois Lauze and
Sune Darkner},
title = {Information-Theoretic Registration with Explicit Reorientation of
Diffusion-Weighted Images},
journal = {J. Math. Imaging Vis.},
volume = {64},
number = {1},
pages = {1--16},
year = {2022},
url = {https://doi.org/10.1007/s10851-021-01050-2},
doi = {10.1007/S10851-021-01050-2},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jmiv/JensenLD22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/emnlp/DaiCDE22,
author = {Xiang Dai and
Ilias Chalkidis and
Sune Darkner and
Desmond Elliott},
editor = {Yoav Goldberg and
Zornitsa Kozareva and
Yue Zhang},
title = {Revisiting Transformer-based Models for Long Document Classification},
booktitle = {Findings of the Association for Computational Linguistics: {EMNLP}
2022, Abu Dhabi, United Arab Emirates, December 7-11, 2022},
pages = {7212--7230},
publisher = {Association for Computational Linguistics},
year = {2022},
url = {https://doi.org/10.18653/v1/2022.findings-emnlp.534},
doi = {10.18653/V1/2022.FINDINGS-EMNLP.534},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/emnlp/DaiCDE22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/geomedia/LiuLBED22,
author = {Renfei Liu and
Fran{\c{c}}ois Lauze and
Erik J. Bekkers and
Kenny Erleben and
Sune Darkner},
editor = {Erik J. Bekkers and
Jelmer M. Wolterink and
Angelica I. Avil{\'{e}}s{-}Rivero},
title = {Group Convolutional Neural Networks for {DWI} Segmentation},
booktitle = {Geometric Deep Learning in Medical Image Analysis, 18 November 2022,
Amsterdam, The Netherlands},
series = {Proceedings of Machine Learning Research},
volume = {194},
pages = {96--106},
publisher = {{PMLR}},
year = {2022},
url = {https://proceedings.mlr.press/v194/liu22a.html},
timestamp = {Mon, 04 Dec 2023 12:11:03 +0100},
biburl = {https://dblp.org/rec/conf/geomedia/LiuLBED22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/LuYKEND22,
author = {Jiahao Lu and
Chong Yin and
Oswin Krause and
Kenny Erleben and
Michael Bachmann Nielsen and
Sune Darkner},
editor = {Mauricio Reyes and
Pedro Henriques Abreu and
Jaime S. Cardoso},
title = {Reducing Annotation Need in Self-explanatory Models for Lung Nodule
Diagnosis},
booktitle = {Interpretability of Machine Intelligence in Medical Image Computing
- 5th International Workshop, iMIMIC 2022, Held in Conjunction with
{MICCAI} 2022, Singapore, Singapore, September 22, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13611},
pages = {33--43},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-17976-1\_4},
doi = {10.1007/978-3-031-17976-1\_4},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miccai/LuYKEND22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/XuMGNED22,
author = {Peidi Xu and
Faezeh Moshfeghifar and
Torkan Gholamalizadeh and
Michael Bachmann Nielsen and
Kenny Erleben and
Sune Darkner},
editor = {Ghada Zamzmi and
Sameer K. Antani and
Ulas Bagci and
Marius George Linguraru and
Sivaramakrishnan Rajaraman and
Zhiyun Xue},
title = {Auto-segmentation of Hip Joints Using MultiPlanar UNet with Transfer
Learning},
booktitle = {Medical Image Learning with Limited and Noisy Data - First International
Workshop, MILLanD 2022, Held in Conjunction with {MICCAI} 2022, Singapore,
September 22, 2022, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13559},
pages = {153--162},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-16760-7\_15},
doi = {10.1007/978-3-031-16760-7\_15},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miccai/XuMGNED22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2203-10667,
author = {Faezeh Moshfeghifar and
Max Kragballe Nielsen and
Jos{\'{e}} D. Tasc{\'{o}}n{-}Vidarte and
Sune Darkner and
Kenny Erleben},
title = {A direct geometry processing cartilage generation method using segmented
bone models from datasets with poor cartilage visibility},
journal = {CoRR},
volume = {abs/2203.10667},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2203.10667},
doi = {10.48550/ARXIV.2203.10667},
eprinttype = {arXiv},
eprint = {2203.10667},
timestamp = {Wed, 30 Mar 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2203-10667.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2204-06683,
author = {Xiang Dai and
Ilias Chalkidis and
Sune Darkner and
Desmond Elliott},
title = {Revisiting Transformer-based Models for Long Document Classification},
journal = {CoRR},
volume = {abs/2204.06683},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2204.06683},
doi = {10.48550/ARXIV.2204.06683},
eprinttype = {arXiv},
eprint = {2204.06683},
timestamp = {Tue, 19 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2204-06683.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2206-13608,
author = {Jiahao Lu and
Chong Yin and
Oswin Krause and
Kenny Erleben and
Michael Bachmann Nielsen and
Sune Darkner},
title = {Reducing Annotation Need in Self-Explanatory Models for Lung Nodule
Diagnosis},
journal = {CoRR},
volume = {abs/2206.13608},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2206.13608},
doi = {10.48550/ARXIV.2206.13608},
eprinttype = {arXiv},
eprint = {2206.13608},
timestamp = {Mon, 04 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2206-13608.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2207-05681,
author = {Torkan Gholamalizadeh and
Sune Darkner and
Peter Lempel S{\o}ndergaard and
Kenny Erleben},
title = {A multi-patient analysis of the center of rotation trajectories using
finite element models of the human mandible},
journal = {CoRR},
volume = {abs/2207.05681},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2207.05681},
doi = {10.48550/ARXIV.2207.05681},
eprinttype = {arXiv},
eprint = {2207.05681},
timestamp = {Thu, 14 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2207-05681.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2208-08226,
author = {Peidi Xu and
Faezeh Moshfeghifar and
Torkan Gholamalizadeh and
Michael Bachmann Nielsen and
Kenny Erleben and
Sune Darkner},
title = {Auto-segmentation of Hip Joints using MultiPlanar UNet with Transfer
learning},
journal = {CoRR},
volume = {abs/2208.08226},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2208.08226},
doi = {10.48550/ARXIV.2208.08226},
eprinttype = {arXiv},
eprint = {2208.08226},
timestamp = {Mon, 22 Aug 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2208-08226.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2209-07576,
author = {Torkan Gholamalizadeh and
Faezeh Moshfeghifar and
Zachary Ferguson and
Teseo Schneider and
Daniele Panozzo and
Sune Darkner and
Masrour Makaremi and
Fran{\c{c}}ois Chan and
Peter Lempel S{\o}ndergaard and
Kenny Erleben},
title = {Open-Full-Jaw: An open-access dataset and pipeline for finite element
models of human jaw},
journal = {CoRR},
volume = {abs/2209.07576},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2209.07576},
doi = {10.48550/ARXIV.2209.07576},
eprinttype = {arXiv},
eprint = {2209.07576},
timestamp = {Thu, 29 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2209-07576.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2210-16097,
author = {Jiahao Lu and
Chong Yin and
Kenny Erleben and
Michael Bachmann Nielsen and
Sune Darkner},
title = {cRedAnno+: Annotation Exploitation in Self-Explanatory Lung Nodule
Diagnosis},
journal = {CoRR},
volume = {abs/2210.16097},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2210.16097},
doi = {10.48550/ARXIV.2210.16097},
eprinttype = {arXiv},
eprint = {2210.16097},
timestamp = {Thu, 03 Nov 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2210-16097.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/amses/ClausKMDEW21,
author = {Susanne Claus and
Pierre Kerfriden and
Faezeh Moshfeghifar and
Sune Darkner and
Kenny Erleben and
C. Wong},
title = {Contact modeling from images using cut finite element solvers},
journal = {Adv. Model. Simul. Eng. Sci.},
volume = {8},
number = {1},
pages = {13},
year = {2021},
url = {https://doi.org/10.1186/s40323-021-00197-2},
doi = {10.1186/S40323-021-00197-2},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/amses/ClausKMDEW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/npjdm/PerslevDKNJI21,
author = {Mathias Perslev and
Sune Darkner and
Lykke Kempfner and
Miki Nikolic and
Poul J{\o}rgen Jennum and
Christian Igel},
title = {U-Sleep: resilient high-frequency sleep staging},
journal = {npj Digit. Medicine},
volume = {4},
year = {2021},
url = {https://doi.org/10.1038/s41746-021-00440-5},
doi = {10.1038/S41746-021-00440-5},
timestamp = {Sat, 13 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/npjdm/PerslevDKNJI21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/pacmcgit/SchreinerPLDKEZ21,
author = {Paul Schreiner and
Maksym Perepichka and
Hayden Lewis and
Sune Darkner and
Paul G. Kry and
Kenny Erleben and
Victor B. Zordan},
title = {Global Position Prediction for Interactive Motion Capture},
journal = {Proc. {ACM} Comput. Graph. Interact. Tech.},
volume = {4},
number = {3},
pages = {39:1--39:16},
year = {2021},
url = {https://doi.org/10.1145/3479985},
doi = {10.1145/3479985},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/pacmcgit/SchreinerPLDKEZ21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/LiuLED21,
author = {Renfei Liu and
Fran{\c{c}}ois Lauze and
Kenny Erleben and
Sune Darkner},
editor = {Suheyla Cetin Karayumak and
Daan Christiaens and
Matteo Figini and
Pamela Guevara and
Noemi G. Gyori and
Vishwesh Nath and
Tomasz Pieciak},
title = {Bundle Geodesic Convolutional Neural Network for {DWI} Segmentation
from Single Scan Learning},
booktitle = {Computational Diffusion {MRI} - 12th International Workshop, {CDMRI}
2021, Held in Conjunction with {MICCAI} 2021, Strasbourg, France,
October 1, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13006},
pages = {121--132},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-87615-9\_11},
doi = {10.1007/978-3-030-87615-9\_11},
timestamp = {Tue, 05 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miccai/LiuLED21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/Tascon-VidarteW21,
author = {Jos{\'{e}} D. Tasc{\'{o}}n{-}Vidarte and
Isak Wahlstedt and
Julien Jomier and
Kenny Erleben and
Ivan R. Vogelius and
Sune Darkner},
editor = {David Svoboda and
Ninon Burgos and
Jelmer M. Wolterink and
Can Zhao},
title = {Cine-MRI Simulation to Evaluate Tumor Tracking},
booktitle = {Simulation and Synthesis in Medical Imaging - 6th International Workshop,
{SASHIMI} 2021, Held in Conjunction with {MICCAI} 2021, Strasbourg,
France, September 27, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12965},
pages = {131--141},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-87592-3\_13},
doi = {10.1007/978-3-030-87592-3\_13},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miccai/Tascon-VidarteW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/scalespace/DarknerVL21,
author = {Sune Darkner and
Jos{\'{e}} D. Tasc{\'{o}}n{-}Vidarte and
Fran{\c{c}}ois Lauze},
editor = {Abderrahim Elmoataz and
Jalal Fadili and
Yvain Qu{\'{e}}au and
Julien Rabin and
Lo{\"{\i}}c Simon},
title = {First Order Locally Orderless Registration},
booktitle = {Scale Space and Variational Methods in Computer Vision - 8th International
Conference, {SSVM} 2021, Virtual Event, May 16-20, 2021, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12679},
pages = {177--188},
publisher = {Springer},
year = {2021},
url = {https://doi.org/10.1007/978-3-030-75549-2\_15},
doi = {10.1007/978-3-030-75549-2\_15},
timestamp = {Mon, 28 Aug 2023 21:17:48 +0200},
biburl = {https://dblp.org/rec/conf/scalespace/DarknerVL21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2106-11942,
author = {Abraham George Smith and
Jens Petersen and
Cynthia Terrones{-}Campos and
Anne Kiil Berthelsen and
Nora Jarrett Forbes and
Sune Darkner and
Lena Specht and
Ivan Richter Vogelius},
title = {RootPainter3D: Interactive-machine-learning enables rapid and accurate
contouring for radiotherapy},
journal = {CoRR},
volume = {abs/2106.11942},
year = {2021},
url = {https://arxiv.org/abs/2106.11942},
eprinttype = {arXiv},
eprint = {2106.11942},
timestamp = {Wed, 30 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2106-11942.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2108-04926,
author = {Sune Darkner and
Jose D. Tascon and
Fran{\c{c}}ois Lauze},
title = {First Order Locally Orderless Registration},
journal = {CoRR},
volume = {abs/2108.04926},
year = {2021},
url = {https://arxiv.org/abs/2108.04926},
eprinttype = {arXiv},
eprint = {2108.04926},
timestamp = {Wed, 18 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2108-04926.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2010-05258,
author = {Torkan Gholamalizadeh and
Sune Darkner and
Paolo Maria Cattaneo and
Peter Lempel S{\o}ndergaard and
Kenny Erleben},
title = {Mandibular Teeth Movement Variations in Tipping Scenario: {A} Finite
Element Study on Several Patients},
journal = {CoRR},
volume = {abs/2010.05258},
year = {2020},
url = {https://arxiv.org/abs/2010.05258},
eprinttype = {arXiv},
eprint = {2010.05258},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2010-05258.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icra/HolstenEDE19,
author = {Fredrik Holsten and
Morten Pol Engell{-}N{\o}rreg{\aa}rd and
Sune Darkner and
Kenny Erleben},
title = {Data Driven Inverse Kinematics of Soft Robots using Local Models},
booktitle = {International Conference on Robotics and Automation, {ICRA} 2019,
Montreal, QC, Canada, May 20-24, 2019},
pages = {6251--6257},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/ICRA.2019.8794191},
doi = {10.1109/ICRA.2019.8794191},
timestamp = {Sat, 19 Oct 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icra/HolstenEDE19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/NielsenDF19,
author = {Rune Kok Nielsen and
Sune Darkner and
Aasa Feragen},
editor = {Dinggang Shen and
Tianming Liu and
Terry M. Peters and
Lawrence H. Staib and
Caroline Essert and
Sean Zhou and
Pew{-}Thian Yap and
Ali R. Khan},
title = {TopAwaRe: Topology-Aware Registration},
booktitle = {Medical Image Computing and Computer Assisted Intervention - {MICCAI}
2019 - 22nd International Conference, Shenzhen, China, October 13-17,
2019, Proceedings, Part {II}},
series = {Lecture Notes in Computer Science},
volume = {11765},
pages = {364--372},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-32245-8\_41},
doi = {10.1007/978-3-030-32245-8\_41},
timestamp = {Mon, 19 Feb 2024 14:24:13 +0100},
biburl = {https://dblp.org/rec/conf/miccai/NielsenDF19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/nips/PerslevJDJI19,
author = {Mathias Perslev and
Michael Hejselbak Jensen and
Sune Darkner and
Poul J{\o}rgen Jennum and
Christian Igel},
editor = {Hanna M. Wallach and
Hugo Larochelle and
Alina Beygelzimer and
Florence d'Alch{\'{e}}{-}Buc and
Emily B. Fox and
Roman Garnett},
title = {U-Time: {A} Fully Convolutional Network for Time Series Segmentation
Applied to Sleep Staging},
booktitle = {Advances in Neural Information Processing Systems 32: Annual Conference
on Neural Information Processing Systems 2019, NeurIPS 2019, December
8-14, 2019, Vancouver, BC, Canada},
pages = {4417--4428},
year = {2019},
url = {https://proceedings.neurips.cc/paper/2019/hash/57bafb2c2dfeefba931bb03a835b1fa9-Abstract.html},
timestamp = {Mon, 16 May 2022 15:41:51 +0200},
biburl = {https://dblp.org/rec/conf/nips/PerslevJDJI19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1905-12056,
author = {Henrik Gr{\o}nholt Jensen and
Fran{\c{c}}ois Lauze and
Sune Darkner},
title = {Information-Theoretic Registration with Explicit Reorientation of
Diffusion-Weighted Images},
journal = {CoRR},
volume = {abs/1905.12056},
year = {2019},
url = {http://arxiv.org/abs/1905.12056},
eprinttype = {arXiv},
eprint = {1905.12056},
timestamp = {Mon, 03 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1905-12056.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1910-11162,
author = {Mathias Perslev and
Michael Hejselbak Jensen and
Sune Darkner and
Poul J{\o}rgen Jennum and
Christian Igel},
title = {U-Time: {A} Fully Convolutional Network for Time Series Segmentation
Applied to Sleep Staging},
journal = {CoRR},
volume = {abs/1910.11162},
year = {2019},
url = {http://arxiv.org/abs/1910.11162},
eprinttype = {arXiv},
eprint = {1910.11162},
timestamp = {Sat, 23 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-1910-11162.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/pami/DarknerPLS18,
author = {Sune Darkner and
Akshay Pai and
Matthew G. Liptrot and
Jon Sporring},
title = {Collocation for Diffeomorphic Deformations in Medical Image Registration},
journal = {{IEEE} Trans. Pattern Anal. Mach. Intell.},
volume = {40},
number = {7},
pages = {1570--1583},
year = {2018},
url = {https://doi.org/10.1109/TPAMI.2017.2730205},
doi = {10.1109/TPAMI.2017.2730205},
timestamp = {Mon, 16 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/pami/DarknerPLS18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sca/HolstenDEE18,
author = {Fredrik Holsten and
Sune Darkner and
Morten Pol Engell{-}N{\o}rreg{\aa}rd and
Kenny Erleben},
editor = {Dieter W. Fellner},
title = {Local Models for Data Driven Inverse Kinematics of Soft Robots},
booktitle = {Poster Proceedings of the {ACM} SIGGRAPH/Eurographics Symposium on
Computer Animation, {SCA} 2018 Posters, Paris, France, July 11-13,
2018},
pages = {7--8},
publisher = {Eurographics Association},
year = {2018},
url = {https://doi.org/10.2312/sca.20181186},
doi = {10.2312/SCA.20181186},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/sca/HolstenDEE18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1811-03848,
author = {Sune Darkner and
Stefan Sommer and
Andreas Schuhmacher and
Henrik Ingerslev Anders O. Baandrup and
Carsten Thomsen and
S{\o}ren J{\o}nsson},
title = {An Average of the Human Ear Canal: Recovering Acoustical Properties
via Shape Analysis},
journal = {CoRR},
volume = {abs/1811.03848},
year = {2018},
url = {http://arxiv.org/abs/1811.03848},
eprinttype = {arXiv},
eprint = {1811.03848},
timestamp = {Fri, 23 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-1811-03848.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/PaiSRKDSN17,
author = {Akshay Pai and
Stefan Sommer and
Lars Lau Rak{\^{e}}t and
Line K{\"{u}}hnel and
Sune Darkner and
Lauge S{\o}rensen and
Mads Nielsen},
title = {A Statistical Model for Simultaneous Template Estimation, Bias Correction,
and Registration of 3D Brain Images},
journal = {CoRR},
volume = {abs/1705.00432},
year = {2017},
url = {http://arxiv.org/abs/1705.00432},
eprinttype = {arXiv},
eprint = {1705.00432},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/PaiSRKDSN17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/PaiSSDSN16,
author = {Akshay Pai and
Stefan Sommer and
Lauge S{\o}rensen and
Sune Darkner and
Jon Sporring and
Mads Nielsen},
title = {Kernel Bundle Diffeomorphic Image Registration Using Stationary Velocity
Fields and Wendland Basis Functions},
journal = {{IEEE} Trans. Medical Imaging},
volume = {35},
number = {6},
pages = {1369--1380},
year = {2016},
url = {https://doi.org/10.1109/TMI.2015.2511062},
doi = {10.1109/TMI.2015.2511062},
timestamp = {Thu, 18 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tmi/PaiSSDSN16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/KasenburgDHLF16,
author = {Niklas Kasenburg and
Sune Darkner and
Ute Hahn and
Matthew G. Liptrot and
Aasa Feragen},
title = {Structural parcellation of the thalamus using shortest-path tractography},
booktitle = {13th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
2016, Prague, Czech Republic, April 13-16, 2016},
pages = {559--563},
publisher = {{IEEE}},
year = {2016},
url = {https://doi.org/10.1109/ISBI.2016.7493330},
doi = {10.1109/ISBI.2016.7493330},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/isbi/KasenburgDHLF16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/PaiSRKDSN16,
author = {Akshay Pai and
Stefan Sommer and
Lars Lau Rak{\^{e}}t and
Line K{\"{u}}hnel and
Sune Darkner and
Lauge S{\o}rensen and
Mads Nielsen},
editor = {Henning M{\"{u}}ller and
B. Michael Kelm and
Tal Arbel and
Weidong Cai and
Manual Jorge Cardoso and
Georg Langs and
Bjoern H. Menze and
Dimitris N. Metaxas and
Albert Montillo and
William M. Wells III and
Shaoting Zhang and
Albert C. S. Chung and
Mark Jenkinson and
Annemie Ribbens},
title = {A Statistical Model for Simultaneous Template Estimation, Bias Correction,
and Registration of 3D Brain Images},
booktitle = {Medical Computer Vision and Bayesian and Graphical Models for Biomedical
Imaging - {MICCAI} 2016 International Workshops, {MCV} and BAMBI,
Athens, Greece, October 21, 2016, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {10081},
pages = {151--159},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-61188-4\_14},
doi = {10.1007/978-3-319-61188-4\_14},
timestamp = {Mon, 02 Oct 2023 15:15:01 +0200},
biburl = {https://dblp.org/rec/conf/miccai/PaiSRKDSN16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/KasenburgPD16,
author = {Niklas Kasenburg and
Morten Vester Pedersen and
Sune Darkner},
editor = {Martin A. Styner and
Elsa D. Angelini},
title = {Finding significantly connected voxels based on histograms of connection
strengths},
booktitle = {Medical Imaging 2016: Image Processing, San Diego, California, USA,
February 27, 2016},
series = {{SPIE} Proceedings},
volume = {9784},
pages = {97843I},
publisher = {{SPIE}},
year = {2016},
url = {https://doi.org/10.1117/12.2216184},
doi = {10.1117/12.2216184},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/miip/KasenburgPD16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/MichalkiewiczPL16,
author = {Mateusz Michalkiewicz and
Akshay Pai and
Kelvin K. Leung and
Stefan Sommer and
Sune Darkner and
Lauge S{\o}rensen and
Jon Sporring and
Mads Nielsen},
editor = {Martin A. Styner and
Elsa D. Angelini},
title = {Combining the boundary shift integral and tensor-based morphometry
for brain atrophy estimation},
booktitle = {Medical Imaging 2016: Image Processing, San Diego, California, USA,
February 27, 2016},
series = {{SPIE} Proceedings},
volume = {9784},
pages = {978406},
publisher = {{SPIE}},
year = {2016},
url = {https://doi.org/10.1117/12.2217089},
doi = {10.1117/12.2217089},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miip/MichalkiewiczPL16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/PaiKSDSN15,
author = {Akshay Pai and
Stefan Klein and
Stefan Sommer and
Sune Darkner and
Jon Sporring and
Mads Nielsen},
title = {Diffeomorphic image registration with automatic time-step adjustment},
booktitle = {12th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
2015, Brooklyn, NY, USA, April 16-19, 2015},
pages = {1085--1088},
publisher = {{IEEE}},
year = {2015},
url = {https://doi.org/10.1109/ISBI.2015.7164060},
doi = {10.1109/ISBI.2015.7164060},
timestamp = {Wed, 04 Oct 2023 17:01:25 +0200},
biburl = {https://dblp.org/rec/conf/isbi/PaiKSDSN15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/JensenLND15,
author = {Henrik G. Jensen and
Fran{\c{c}}ois Lauze and
Mads Nielsen and
Sune Darkner},
editor = {Nassir Navab and
Joachim Hornegger and
William M. Wells III and
Alejandro F. Frangi},
title = {Locally Orderless Registration for Diffusion Weighted Images},
booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI}
2015 - 18th International Conference Munich, Germany, October 5-9,
2015, Proceedings, Part {II}},
series = {Lecture Notes in Computer Science},
volume = {9350},
pages = {305--312},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-24571-3\_37},
doi = {10.1007/978-3-319-24571-3\_37},
timestamp = {Mon, 03 Jan 2022 22:36:38 +0100},
biburl = {https://dblp.org/rec/conf/miccai/JensenLND15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/PaiSSDSN15,
author = {Akshay Pai and
Stefan Sommer and
Lauge S{\o}rensen and
Sune Darkner and
Jon Sporring and
Mads Nielsen},
editor = {S{\'{e}}bastien Ourselin and
Martin Andreas Styner},
title = {Image registration using stationary velocity fields parameterized
by norm-minimizing Wendland kernel},
booktitle = {Medical Imaging 2015: Image Processing, Orlando, Florida, USA, February
24-26, 2015},
series = {{SPIE} Proceedings},
volume = {9413},
pages = {941335},
publisher = {{SPIE}},
year = {2015},
url = {https://doi.org/10.1117/12.2076469},
doi = {10.1117/12.2076469},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miip/PaiSSDSN15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/SporringKDNNJ14,
author = {Jon Sporring and
Mahdieh Khanmohammadi and
Sune Darkner and
Nicoletta Nava and
Jens Rondel Nyengaard and
Eva Bjorn Wedel Jensen},
title = {Estimating the thickness of ultra thin sections for electron microscopy
by image statistics},
booktitle = {{IEEE} 11th International Symposium on Biomedical Imaging, {ISBI}
2014, April 29 - May 2, 2014, Beijing, Chin, Beijing, China},
pages = {157--160},
publisher = {{IEEE}},
year = {2014},
url = {https://doi.org/10.1109/ISBI.2014.6867833},
doi = {10.1109/ISBI.2014.6867833},
timestamp = {Wed, 04 Oct 2023 17:01:25 +0200},
biburl = {https://dblp.org/rec/conf/isbi/SporringKDNNJ14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/ArbonesJLRHID14,
author = {D{\'{\i}}dac R. Arbon{\`{e}}s and
Henrik G. Jensen and
Annika Loft and
Per Munck af Rosensch{\"{o}}ld and
Anders E. Hansen and
Christian Igel and
Sune Darkner},
editor = {S{\'{e}}bastien Ourselin and
Martin A. Styner},
title = {Automatic FDG-PET-based tumor and metastatic lymph node segmentation
in cervical cancer},
booktitle = {Medical Imaging 2014: Image Processing, San Diego, California, USA,
February 16-18, 2014},
series = {{SPIE} Proceedings},
volume = {9034},
pages = {903441},
publisher = {{SPIE}},
year = {2014},
url = {https://doi.org/10.1117/12.2042909},
doi = {10.1117/12.2042909},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miip/ArbonesJLRHID14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wbir/PaiSDSSN14,
author = {Akshay Pai and
Stefan Sommer and
Sune Darkner and
Lauge S{\o}rensen and
Jon Sporring and
Mads Nielsen},
editor = {S{\'{e}}bastien Ourselin and
Marc Modat},
title = {Stepwise Inverse Consistent Euler's Scheme for Diffeomorphic Image
Registration},
booktitle = {Biomedical Image Registration - 6th International Workshop, {WBIR}
2014, London, UK, July 7-8, 2014. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8545},
pages = {223--230},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-08554-8\_23},
doi = {10.1007/978-3-319-08554-8\_23},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wbir/PaiSDSSN14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/pami/DarknerS13,
author = {Sune Darkner and
Jon Sporring},
title = {Locally Orderless Registration},
journal = {{IEEE} Trans. Pattern Anal. Mach. Intell.},
volume = {35},
number = {6},
pages = {1437--1450},
year = {2013},
url = {https://doi.org/10.1109/TPAMI.2012.238},
doi = {10.1109/TPAMI.2012.238},
timestamp = {Wed, 14 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/pami/DarknerS13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamis/SommerNDP13,
author = {Stefan Sommer and
Mads Nielsen and
Sune Darkner and
Xavier Pennec},
title = {Higher-Order Momentum Distributions and Locally Affine {LDDMM} Registration},
journal = {{SIAM} J. Imaging Sci.},
volume = {6},
number = {1},
pages = {341--367},
year = {2013},
url = {https://doi.org/10.1137/110859002},
doi = {10.1137/110859002},
timestamp = {Tue, 14 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamis/SommerNDP13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/PaiSDMJDLOCSSN13,
author = {Akshay Pai and
Lauge S{\o}rensen and
Sune Darkner and
Peter Mysling and
Dan R. J{\o}rgensen and
Erik B. Dam and
Martin Lillholm and
Joonmi Oh and
Gennan Chen and
Joyce Suhy and
Jon Sporring and
Mads Nielsen},
title = {Cube propagation for focal brain atrophy estimation},
booktitle = {10th {IEEE} International Symposium on Biomedical Imaging: From Nano
to Macro, {ISBI} 2013, 7-11 April, 2013, San Francisco, CA, USA, Proceedings},
pages = {402--405},
publisher = {{IEEE}},
year = {2013},
url = {https://doi.org/10.1109/ISBI.2013.6556497},
doi = {10.1109/ISBI.2013.6556497},
timestamp = {Wed, 04 Oct 2023 17:01:25 +0200},
biburl = {https://dblp.org/rec/conf/isbi/PaiSDMJDLOCSSN13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/MyslingDSDL13,
author = {Peter Mysling and
Sune Darkner and
Jon Sporring and
Erik Dam and
Martin Lillholm},
editor = {S{\'{e}}bastien Ourselin and
David R. Haynor},
title = {Automatic measurement of wrist synovitis from contrast-enhanced {MRI:}
a registration-centered approach},
booktitle = {Medical Imaging 2013: Image Processing, Lake Buena Vista (Orlando
Area), Florida, USA, February 10-12, 2013},
series = {{SPIE} Proceedings},
volume = {8669},
pages = {86692U},
publisher = {{SPIE}},
year = {2013},
url = {https://doi.org/10.1117/12.2006201},
doi = {10.1117/12.2006201},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miip/MyslingDSDL13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/eccv/LarsenDDP12,
author = {Anders Boesen Lindbo Larsen and
Sune Darkner and
Anders Lindbjerg Dahl and
Kim Steenstrup Pedersen},
editor = {Andrew W. Fitzgibbon and
Svetlana Lazebnik and
Pietro Perona and
Yoichi Sato and
Cordelia Schmid},
title = {Jet-Based Local Image Descriptors},
booktitle = {Computer Vision - {ECCV} 2012 - 12th European Conference on Computer
Vision, Florence, Italy, October 7-13, 2012, Proceedings, Part {III}},
series = {Lecture Notes in Computer Science},
volume = {7574},
pages = {638--650},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-33712-3\_46},
doi = {10.1007/978-3-642-33712-3\_46},
timestamp = {Thu, 27 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/eccv/LarsenDDP12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/DarknerC12,
author = {Sune Darkner and
Line Harder Clemmensen},
editor = {Fei Wang and
Dinggang Shen and
Pingkun Yan and
Kenji Suzuki},
title = {Data Driven Constraints for the {SVM}},
booktitle = {Machine Learning in Medical Imaging - Third International Workshop,
{MLMI} 2012, Held in Conjunction with {MICCAI} 2012, Nice, France,
October 1, 2012, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {7588},
pages = {70--77},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-35428-1\_9},
doi = {10.1007/978-3-642-35428-1\_9},
timestamp = {Sat, 05 Sep 2020 18:06:04 +0200},
biburl = {https://dblp.org/rec/conf/miccai/DarknerC12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1205-5425,
author = {Sune Darkner and
Jon Sporring},
title = {Locally Orderless Registration},
journal = {CoRR},
volume = {abs/1205.5425},
year = {2012},
url = {http://arxiv.org/abs/1205.5425},
eprinttype = {arXiv},
eprint = {1205.5425},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1205-5425.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/vc/DarknerE11,
author = {Sune Darkner and
Kenny Erleben},
title = {A hyper elasticity method for interactive virtual design of hearing
aids - {A} parallel method for general non-linear hyper elasticity
modeling},
journal = {Vis. Comput.},
volume = {27},
number = {6-8},
pages = {645--653},
year = {2011},
url = {https://doi.org/10.1007/s00371-011-0574-y},
doi = {10.1007/S00371-011-0574-Y},
timestamp = {Thu, 04 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/vc/DarknerE11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipmi/DarknerS11,
author = {Sune Darkner and
Jon Sporring},
editor = {G{\'{a}}bor Sz{\'{e}}kely and
Horst K. Hahn},
title = {Generalized Partial Volume: An Inferior Density Estimator to Parzen
Windows for Normalized Mutual Information},
booktitle = {Information Processing in Medical Imaging - 22nd International Conference,
{IPMI} 2011, Kloster Irsee, Germany, July 3-8, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6801},
pages = {436--447},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-22092-0\_36},
doi = {10.1007/978-3-642-22092-0\_36},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ipmi/DarknerS11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/scia/DarknerHLH11,
author = {Sune Darkner and
Michael Sass Hansen and
Rasmus Larsen and
Mads Fogtmann Hansen},
editor = {Anders Heyden and
Fredrik Kahl},
title = {Efficient Hyperelastic Regularization for Registration},
booktitle = {Image Analysis - 17th Scandinavian Conference, {SCIA} 2011, Ystad,
Sweden, May 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6688},
pages = {295--305},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-21227-7\_28},
doi = {10.1007/978-3-642-21227-7\_28},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/scia/DarknerHLH11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1112-3166,
author = {Stefan Sommer and
Mads Nielsen and
Sune Darkner and
Xavier Pennec},
title = {Higher Order Kernels and Locally Affine {LDDMM} Registration},
journal = {CoRR},
volume = {abs/1112.3166},
year = {2011},
url = {http://arxiv.org/abs/1112.3166},
eprinttype = {arXiv},
eprint = {1112.3166},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1112-3166.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/OlafsdottirPHLH10,
author = {Hildur {\'{O}}lafsd{\'{o}}ttir and
Henrik Pedersen and
Michael Sass Hansen and
Mark Lyksborg and
Mads Fogtmann Hansen and
Sune Darkner and
Rasmus Larsen},
editor = {Benoit M. Dawant and
David R. Haynor},
title = {Registration-based interpolation applied to cardiac {MRI}},
booktitle = {Medical Imaging 2010: Image Processing, San Diego, California, USA,
February 14-16, 2010},
series = {{SPIE} Proceedings},
volume = {7623},
pages = {762336},
publisher = {{SPIE}},
year = {2010},
url = {https://doi.org/10.1117/12.845057},
doi = {10.1117/12.845057},
timestamp = {Fri, 04 Jan 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/miip/OlafsdottirPHLH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/visapp/DarknerDLSGW10,
author = {Sune Darkner and
Anders Bjorholm Dahl and
Rasmus Larsen and
Arnold Skimminge and
Ellen Garde and
Gunhild Waldemar},
editor = {Paul Richard and
Jos{\'{e}} Braz},
title = {Local Segmentation by Large Scale Hypothesis Testing - Segmentation
as Outlier Detection},
booktitle = {{VISAPP} 2010 - Proceedings of the Fifth International Conference
on Computer Vision Theory and Applications, Angers, France, May 17-21,
2010 - Volume 2},
pages = {215--220},
publisher = {{INSTICC} Press},
year = {2010},
timestamp = {Fri, 04 Jan 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/visapp/DarknerDLSGW10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/ErbouDFOE08,
author = {S{\o}ren G. H. Erbou and
Sune Darkner and
Jurgen Fripp and
S{\'{e}}bastien Ourselin and
Bjarne K. Ersb{\o}ll},
title = {Estimation of shape model parameters for 3D surfaces},
booktitle = {Proceedings of the 2008 {IEEE} International Symposium on Biomedical
Imaging: From Nano to Macro, Paris, France, May 14-17, 2008},
pages = {624--627},
publisher = {{IEEE}},
year = {2008},
url = {https://doi.org/10.1109/ISBI.2008.4541073},
doi = {10.1109/ISBI.2008.4541073},
timestamp = {Wed, 04 Oct 2023 17:01:25 +0200},
biburl = {https://dblp.org/rec/conf/isbi/ErbouDFOE08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/DarknerSGPL08,
author = {Sune Darkner and
Mert R. Sabuncu and
Polina Golland and
Rasmus R. Paulsen and
Rasmus Larsen},
editor = {Dimitris N. Metaxas and
Leon Axel and
Gabor Fichtinger and
G{\'{a}}bor Sz{\'{e}}kely},
title = {Analysis of Surfaces Using Constrained Regression Models},
booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI}
2008, 11th International Conference, New York, NY, USA, September
6-10, 2008, Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {5241},
pages = {842--849},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-85988-8\_100},
doi = {10.1007/978-3-540-85988-8\_100},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miccai/DarknerSGPL08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/DarknerHPL08,
author = {Sune Darkner and
Dan Witzner Hansen and
Rasmus R. Paulsen and
Rasmus Larsen},
editor = {Joseph M. Reinhardt and
Josien P. W. Pluim},
title = {Robust registration for change detection},
booktitle = {Medical Imaging 2008: Image Processing, San Diego, California, United
States, 16-21 February 2008},
series = {{SPIE} Proceedings},
volume = {6914},
pages = {69142T},
publisher = {{SPIE}},
year = {2008},
url = {https://doi.org/10.1117/12.770106},
doi = {10.1117/12.770106},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miip/DarknerHPL08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/DarknerVPL08,
author = {Sune Darkner and
Martin Vester{-}Christensen and
Rasmus R. Paulsen and
Rasmus Larsen},
editor = {Joseph M. Reinhardt and
Josien P. W. Pluim},
title = {Non-rigid registration of 2D manifolds in 3D Euclidian space},
booktitle = {Medical Imaging 2008: Image Processing, San Diego, California, United
States, 16-21 February 2008},
series = {{SPIE} Proceedings},
volume = {6914},
pages = {69142R},
publisher = {{SPIE}},
year = {2008},
url = {https://doi.org/10.1117/12.769794},
doi = {10.1117/12.769794},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miip/DarknerVPL08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cviu/LarsenSDFCE07,
author = {Rasmus Larsen and
Mikkel B. Stegmann and
Sune Darkner and
S{\o}ren Forchhammer and
Timothy F. Cootes and
Bjarne K. Ersb{\o}ll},
title = {Texture enhanced appearance models},
journal = {Comput. Vis. Image Underst.},
volume = {106},
number = {1},
pages = {20--30},
year = {2007},
url = {https://doi.org/10.1016/j.cviu.2005.09.007},
doi = {10.1016/J.CVIU.2005.09.007},
timestamp = {Mon, 15 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cviu/LarsenSDFCE07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cvpr/KahramanGDL07,
author = {Fatih Kahraman and
Muhittin G{\"{o}}kmen and
Sune Darkner and
Rasmus Larsen},
title = {An Active Illumination and Appearance {(AIA)} Model for Face Alignment},
booktitle = {2007 {IEEE} Computer Society Conference on Computer Vision and Pattern
Recognition {(CVPR} 2007), 18-23 June 2007, Minneapolis, Minnesota,
{USA}},
publisher = {{IEEE} Computer Society},
year = {2007},
url = {https://doi.org/10.1109/CVPR.2007.383399},
doi = {10.1109/CVPR.2007.383399},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cvpr/KahramanGDL07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/DarknerLP07,
author = {Sune Darkner and
Rasmus Larsen and
Rasmus R. Paulsen},
editor = {Nicholas Ayache and
S{\'{e}}bastien Ourselin and
Anthony J. Maeder},
title = {Analysis of Deformation of the Human Ear and Canal Caused by Mandibular
Movement},
booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI}
2007, 10th International Conference, Brisbane, Australia, October
29 - November 2, 2007, Proceedings, Part {II}},
series = {Lecture Notes in Computer Science},
volume = {4792},
pages = {801--808},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-75759-7\_97},
doi = {10.1007/978-3-540-75759-7\_97},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miccai/DarknerLP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/Vester-Christensen07,
author = {Martin Vester{-}Christensen and
S{\o}ren G. H. Erbou and
Sune Darkner and
Rasmus Larsen},
editor = {Josien P. W. Pluim and
Joseph M. Reinhardt},
title = {Accelerated 3D image registration},
booktitle = {Medical Imaging 2007: Image Processing, San Diego, CA, United States,
17-22 February 2007},
series = {{SPIE} Proceedings},
volume = {6512},
pages = {65121W},
publisher = {{SPIE}},
year = {2007},
url = {https://doi.org/10.1117/12.709373},
doi = {10.1117/12.709373},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miip/Vester-Christensen07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miip/DarknerVLP07,
author = {Sune Darkner and
Martin Vester{-}Christensen and
Rasmus Larsen and
Rasmus R. Paulsen},
editor = {Josien P. W. Pluim and
Joseph M. Reinhardt},
title = {Evaluating a method for automated rigid registration},
booktitle = {Medical Imaging 2007: Image Processing, San Diego, CA, United States,
17-22 February 2007},
series = {{SPIE} Proceedings},
volume = {6512},
pages = {651225},
publisher = {{SPIE}},
year = {2007},
url = {https://doi.org/10.1117/12.709399},
doi = {10.1117/12.709399},
timestamp = {Fri, 04 Jan 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/miip/DarknerVLP07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cvpr/DarknerLSE04,
author = {Sune Darkner and
Rasmus Larsen and
Mikkel B. Stegmann and
Bjarne K. Ersb{\o}ll},
title = {Wedgelet Enhanced Appearance Models},
booktitle = {{IEEE} Conference on Computer Vision and Pattern Recognition Workshops,
{CVPR} Workshops 2004, Washington, DC, USA, June 27 - July 2, 2004},
pages = {177},
publisher = {{IEEE} Computer Society},
year = {2004},
url = {https://doi.org/10.1109/CVPR.2004.478},
doi = {10.1109/CVPR.2004.478},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cvpr/DarknerLSE04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/scia/LarsenHSDPSLTE03,
author = {Rasmus Larsen and
Klaus Baggesen Hilger and
Karl Skoglund and
Sune Darkner and
Rasmus R. Paulsen and
Mikkel B. Stegmann and
Brian Lading and
Hans Henrik Thodberg and
Hrafnkell Eiriksson},
editor = {Josef Big{\"{u}}n and
Tomas Gustavsson},
title = {Some Issues of Biological Shape Modelling with Applications},
booktitle = {Image Analysis, 13th Scandinavian Conference, {SCIA} 2003, Halmstad,
Sweden, June 29 - July 2, 2003, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {2749},
pages = {509--519},
publisher = {Springer},
year = {2003},
url = {https://doi.org/10.1007/3-540-45103-X\_68},
doi = {10.1007/3-540-45103-X\_68},
timestamp = {Tue, 14 May 2019 10:00:54 +0200},
biburl = {https://dblp.org/rec/conf/scia/LarsenHSDPSLTE03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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