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BibTeX records: Christoph Dieterich
@article{DBLP:journals/corr/abs-2403-13369, author = {Phillip Richter{-}Pechanski and Philipp Wiesenbach and Dominic M. Schwab and Christina Kiriakou and Nicolas Geis and Christoph Dieterich and Anette Frank}, title = {Clinical information extraction for Low-resource languages with Few-shot learning using Pre-trained language models and Prompting}, journal = {CoRR}, volume = {abs/2403.13369}, year = {2024}, url = {https://doi.org/10.48550/arXiv.2403.13369}, doi = {10.48550/ARXIV.2403.13369}, eprinttype = {arXiv}, eprint = {2403.13369}, timestamp = {Mon, 08 Apr 2024 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/corr/abs-2403-13369.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/GjergaVD23, author = {Enio Gjerga and Isabel S. Naarmann{-}de Vries and Christoph Dieterich}, title = {Characterizing alternative splicing effects on protein interaction networks with {LINDA}}, journal = {Bioinform.}, volume = {39}, number = {Supplement-1}, pages = {458--464}, year = {2023}, url = {https://doi.org/10.1093/bioinformatics/btad224}, doi = {10.1093/BIOINFORMATICS/BTAD224}, timestamp = {Wed, 31 Jan 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/GjergaVD23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/medinfo/KreftingMPSBDKM23, author = {Dagmar Krefting and Nico T. Mutters and R{\"{u}}diger Pryss and Martin Sedlmayr and Martin Boeker and Christoph Dieterich and Carolin Koll and Martina Mueller and Anna Slagman and Dagmar Waltemath and Antje Wulff and Sven Zenker}, editor = {Jen Bichel{-}Findlay and Paula Otero and Philip Scott and Elaine Huesing}, title = {Herding Cats in Pandemic Times - Towards Technological and Organizational Convergence of Heterogeneous Solutions for Investigating and Mastering the Pandemic in University Medical Centers}, booktitle = {{MEDINFO} 2023 - The Future Is Accessible - Proceedings of the 19th World Congress on Medical and Health Informatics, Sydney, NSW, Australia, 8-12 July 2023}, series = {Studies in Health Technology and Informatics}, volume = {310}, pages = {1271--1275}, publisher = {{IOS} Press}, year = {2023}, url = {https://doi.org/10.3233/SHTI231169}, doi = {10.3233/SHTI231169}, timestamp = {Sat, 10 Feb 2024 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/medinfo/KreftingMPSBDKM23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/mie/MichaelisPMGBDJ23, author = {Lea Michaelis and Rasim Atakan Poyraz and Michael Rusongoza Muzoora and Kerstin Gierend and Alexander Bartschke and Christoph Dieterich and Tim Johann and Dagmar Krefting and Dagmar Waltemath and Sylvia Thun}, editor = {Maria H{\"{a}}gglund and Madeleine Blusi and Stefano Bonacina and Lina Nilsson and Inge Cort Madsen and Sylvia Pelayo and Anne Moen and Arriel Benis and Lars Lindsk{\"{o}}ld and Parisis Gallos}, title = {Insights into the FAIRness of the German Network University Medicine: {A} Survey}, booktitle = {Caring is Sharing - Exploiting the Value in Data for Health and Innovation - Proceedings of {MIE} 2023, Gothenburg, Sweden, 22 - 25 May 2023}, series = {Studies in Health Technology and Informatics}, volume = {302}, pages = {741--742}, publisher = {{IOS} Press}, year = {2023}, url = {https://doi.org/10.3233/SHTI230251}, doi = {10.3233/SHTI230251}, timestamp = {Fri, 07 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/mie/MichaelisPMGBDJ23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/mie/Richter-Pechanski23, author = {Phillip Richter{-}Pechanski and Philipp Wiesenbach and Dominic M. Schwab and Christina Kiriakou and Mingyang He and Nicolas A. Geis and Anette Frank and Christoph Dieterich}, editor = {Maria H{\"{a}}gglund and Madeleine Blusi and Stefano Bonacina and Lina Nilsson and Inge Cort Madsen and Sylvia Pelayo and Anne Moen and Arriel Benis and Lars Lindsk{\"{o}}ld and Parisis Gallos}, title = {Few-Shot and Prompt Training for Text Classification in German Doctor's Letters}, booktitle = {Caring is Sharing - Exploiting the Value in Data for Health and Innovation - Proceedings of {MIE} 2023, Gothenburg, Sweden, 22 - 25 May 2023}, series = {Studies in Health Technology and Informatics}, volume = {302}, pages = {819--820}, publisher = {{IOS} Press}, year = {2023}, url = {https://doi.org/10.3233/SHTI230275}, doi = {10.3233/SHTI230275}, timestamp = {Wed, 05 Jul 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/mie/Richter-Pechanski23.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bib/BoileauAVD21, author = {Etienne Boileau and Janine Altm{\"{u}}ller and Isabel S. Naarmann{-}de Vries and Christoph Dieterich}, title = {A comparison of metabolic labeling and statistical methods to infer genome-wide dynamics of {RNA} turnover}, journal = {Briefings Bioinform.}, volume = {22}, number = {6}, year = {2021}, url = {https://doi.org/10.1093/bib/bbab219}, doi = {10.1093/BIB/BBAB219}, timestamp = {Sun, 02 Oct 2022 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bib/BoileauAVD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gmds/SmieszekKAMD21, author = {Magdalena Smieszek and Aljoscha Kindermann and Ali Amr and Benjamin Meder and Christoph Dieterich}, editor = {Rainer R{\"{o}}hrig and Tim Bei{\ss}barth and Jochem K{\"{o}}nig and Claudia Ose and G{\'{e}}raldine Rauch and Ulrich Sax and Bj{\"{o}}rn Schreiweis and Martin Sedlmayr}, title = {An Apple Watch Dashboard for HiGHmed Heart Insufficency Patients}, booktitle = {German Medical Data Sciences 2021: Digital Medicine: Recognize - Understand - Heal - Proceedings of the Joint Conference of the 66th Annual Meeting of the German Association of Medical Informatics, Biometry, and Epidemiology e.V. (gmds) and the 13th Annual Meeting of the {TMF} - Technology, Methods, and Infrastructure for Networked Medical Research e.V. 2021 online in Kiel, Germany, September 26-30, 2021}, series = {Studies in Health Technology and Informatics}, volume = {283}, pages = {146--155}, publisher = {{IOS} Press}, year = {2021}, url = {https://doi.org/10.3233/SHTI210553}, doi = {10.3233/SHTI210553}, timestamp = {Wed, 06 Oct 2021 14:13:01 +0200}, biburl = {https://dblp.org/rec/conf/gmds/SmieszekKAMD21.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gmds/KindermannTBLRD20, author = {Aljoscha Kindermann and Erik Tute and Sebastian Benda and Martin L{\"{o}}pprich and Phillip Richter{-}Pechanski and Christoph Dieterich}, editor = {Rainer R{\"{o}}hrig and Tim Bei{\ss}barth and Werner Brannath and Hans{-}Ulrich Prokosch and Irene Schmidtmann and Susanne Stolpe and Antonia Zapf}, title = {Preliminary Analysis of Structured Reporting in the HiGHmed Use Case Cardiology: Challenges and Measures}, booktitle = {German Medical Data Sciences: Bringing Data to Life - Proceedings of the Joint Annual Meeting of the German Association of Medical Informatics, Biometry and Epidemiology (gmds e.V.) and the Central European Network - International Biometric Society {(CEN-IBS)} 2020 in Berlin, Germany}, series = {Studies in Health Technology and Informatics}, volume = {278}, pages = {187--194}, publisher = {{IOS} Press}, year = {2020}, url = {https://doi.org/10.3233/SHTI210068}, doi = {10.3233/SHTI210068}, timestamp = {Sun, 06 Aug 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/gmds/KindermannTBLRD20.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/JakobiUD19, author = {Tobias Jakobi and Alexey Uvarovskii and Christoph Dieterich}, title = {circtools - a one-stop software solution for circular {RNA} research}, journal = {Bioinform.}, volume = {35}, number = {13}, pages = {2326--2328}, year = {2019}, url = {https://doi.org/10.1093/bioinformatics/bty948}, doi = {10.1093/BIOINFORMATICS/BTY948}, timestamp = {Sat, 30 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/JakobiUD19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/ploscb/UvarovskiiVD19, author = {Alexey Uvarovskii and Isabel S. Naarmann{-}de Vries and Christoph Dieterich}, title = {On the optimal design of metabolic {RNA} labeling experiments}, journal = {PLoS Comput. Biol.}, volume = {15}, number = {8}, year = {2019}, url = {https://doi.org/10.1371/journal.pcbi.1007252}, doi = {10.1371/JOURNAL.PCBI.1007252}, timestamp = {Sat, 25 Dec 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/ploscb/UvarovskiiVD19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gmds/Richter-Pechanski19, author = {Phillip Richter{-}Pechanski and Ali Amr and Hugo A. Katus and Christoph Dieterich}, editor = {Rainer R{\"{o}}hrig and Harald Binder and Hans{-}Ulrich Prokosch and Ulrich Sax and Irene Schmidtmann and Susanne Stolpe and Antonia Zapf}, title = {Deep Learning Approaches Outperform Conventional Strategies in De-Identification of German Medical Reports}, booktitle = {German Medical Data Sciences: Shaping Change - Creative Solutions for Innovative Medicine - Proceedings of the 64th Annual Meeting of the German Association of Medical Informatics, Biometry and Epidemiology (gmds e.V.) 2019 in Dortmund, Germany - {GMDS} 2019}, series = {Studies in Health Technology and Informatics}, volume = {267}, pages = {101--109}, publisher = {{IOS} Press}, year = {2019}, url = {https://doi.org/10.3233/SHTI190813}, doi = {10.3233/SHTI190813}, timestamp = {Wed, 10 Feb 2021 08:45:27 +0100}, biburl = {https://dblp.org/rec/conf/gmds/Richter-Pechanski19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gmds/KindermannSHGMD19, author = {Aljoscha Kindermann and Ekaterina Stepanova and Hauke Hund and Nicolas Geis and Brandon Malone and Christoph Dieterich}, editor = {Rainer R{\"{o}}hrig and Harald Binder and Hans{-}Ulrich Prokosch and Ulrich Sax and Irene Schmidtmann and Susanne Stolpe and Antonia Zapf}, title = {MedEx - Data Analytics for Medical Domain Experts in Real-Time}, booktitle = {German Medical Data Sciences: Shaping Change - Creative Solutions for Innovative Medicine - Proceedings of the 64th Annual Meeting of the German Association of Medical Informatics, Biometry and Epidemiology (gmds e.V.) 2019 in Dortmund, Germany - {GMDS} 2019}, series = {Studies in Health Technology and Informatics}, volume = {267}, pages = {142--149}, publisher = {{IOS} Press}, year = {2019}, url = {https://doi.org/10.3233/SHTI190818}, doi = {10.3233/SHTI190818}, timestamp = {Wed, 10 Feb 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/gmds/KindermannSHGMD19.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gmds/Richter-Pechanski18, author = {Phillip Richter{-}Pechanski and Stefan Riezler and Christoph Dieterich}, editor = {Ursula H{\"{u}}bner and Ulrich Sax and Hans{-}Ulrich Prokosch and Bernhard Breil and Harald Binder and Antonia Zapf and Brigitte Strahwald and Tim Bei{\ss}barth and Niels Grabe and Anke Sch{\"{o}}ler}, title = {De-Identification of German Medical Admission Notes}, booktitle = {German Medical Data Sciences: {A} Learning Healthcare System - Proceedings of the 63rd Annual Meeting of the German Association of Medical Informatics, Biometry and Epidemiology {(GMDS} e.V.) 2018 in Osnabr{\"{u}}ck, Germany, 2-6 September 2018, {GMDS} 2018}, series = {Studies in Health Technology and Informatics}, volume = {253}, pages = {165--169}, publisher = {{IOS} Press}, year = {2018}, url = {https://doi.org/10.3233/978-1-61499-896-9-165}, doi = {10.3233/978-1-61499-896-9-165}, timestamp = {Wed, 10 Feb 2021 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/gmds/Richter-Pechanski18.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/RoehrDR17, author = {Johannes T. Roehr and Christoph Dieterich and Knut Reinert}, title = {Flexbar 3.0 - {SIMD} and multicore parallelization}, journal = {Bioinform.}, volume = {33}, number = {18}, pages = {2941--2942}, year = {2017}, url = {https://doi.org/10.1093/bioinformatics/btx330}, doi = {10.1093/BIOINFORMATICS/BTX330}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/RoehrDR17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/UvarovskiiD17, author = {Alexey Uvarovskii and Christoph Dieterich}, title = {pulseR: Versatile computational analysis of {RNA} turnover from metabolic labeling experiments}, journal = {Bioinform.}, volume = {33}, number = {20}, pages = {3305--3307}, year = {2017}, url = {https://doi.org/10.1093/bioinformatics/btx368}, doi = {10.1093/BIOINFORMATICS/BTX368}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/UvarovskiiD17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/PiechottaWOLD17, author = {Michael Piechotta and Emanuel Wyler and Uwe Ohler and Markus Landthaler and Christoph Dieterich}, title = {{JACUSA:} site-specific identification of {RNA} editing events from replicate sequencing data}, journal = {{BMC} Bioinform.}, volume = {18}, number = {1}, pages = {7:1--7:15}, year = {2017}, url = {https://doi.org/10.1186/s12859-016-1432-8}, doi = {10.1186/S12859-016-1432-8}, timestamp = {Sun, 15 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bmcbi/PiechottaWOLD17.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/ChengMD16, author = {Jun Cheng and Franziska Metge and Christoph Dieterich}, title = {Specific identification and quantification of circular RNAs from sequencing data}, journal = {Bioinform.}, volume = {32}, number = {7}, pages = {1094--1096}, year = {2016}, url = {https://doi.org/10.1093/bioinformatics/btv656}, doi = {10.1093/BIOINFORMATICS/BTV656}, timestamp = {Mon, 25 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bioinformatics/ChengMD16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/gpb/JakobiCRD16, author = {Tobias Jakobi and Lisa F. Czaja{-}Hasse and Richard Reinhardt and Christoph Dieterich}, title = {Profiling and Validation of the Circular {RNA} Repertoire in Adult Murine Hearts}, journal = {Genom. Proteom. Bioinform.}, volume = {14}, number = {4}, pages = {216--223}, year = {2016}, url = {https://doi.org/10.1016/j.gpb.2016.02.003}, doi = {10.1016/J.GPB.2016.02.003}, timestamp = {Thu, 20 Feb 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/gpb/JakobiCRD16.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/BlinDWRLA15, author = {Kai Blin and Christoph Dieterich and Ricardo Wurmus and Nikolaus Rajewsky and Markus Landthaler and Altuna Akalin}, title = {DoRiNA 2.0 - upgrading the doRiNA database of {RNA} interactions in post-transcriptional regulation}, journal = {Nucleic Acids Res.}, volume = {43}, number = {Database-Issue}, pages = {160--167}, year = {2015}, url = {https://doi.org/10.1093/nar/gku1180}, doi = {10.1093/NAR/GKU1180}, timestamp = {Sat, 30 Sep 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/BlinDWRLA15.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/GusmaoDZC14, author = {Eduardo G. Gusm{\~{a}}o and Christoph Dieterich and Martin Zenke and Ivan G. Costa}, title = {Detection of active transcription factor binding sites with the combination of DNase hypersensitivity and histone modifications}, journal = {Bioinform.}, volume = {30}, number = {22}, pages = {3143--3151}, year = {2014}, url = {https://doi.org/10.1093/bioinformatics/btu519}, doi = {10.1093/BIOINFORMATICS/BTU519}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/GusmaoDZC14.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/PiechottaD13, author = {Michael Piechotta and Christoph Dieterich}, title = {{ACCUSA2:} multi-purpose {SNV} calling enhanced by probabilistic integration of quality scores}, journal = {Bioinform.}, volume = {29}, number = {14}, pages = {1809--1810}, year = {2013}, url = {https://doi.org/10.1093/bioinformatics/btt268}, doi = {10.1093/BIOINFORMATICS/BTT268}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/PiechottaD13.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/AndersMJMKRLD12, author = {Gerd Anders and Sebastian D. Mackowiak and Marvin Jens and Jonas Maaskola and Andreas Kuntzagk and Nikolaus Rajewsky and Markus Landthaler and Christoph Dieterich}, title = {doRiNA: a database of {RNA} interactions in post-transcriptional regulation}, journal = {Nucleic Acids Res.}, volume = {40}, number = {Database-Issue}, pages = {180--186}, year = {2012}, url = {https://doi.org/10.1093/nar/gkr1007}, doi = {10.1093/NAR/GKR1007}, timestamp = {Mon, 26 Oct 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/nar/AndersMJMKRLD12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wob/GusmaoDC12, author = {Eduardo G. Gusm{\~{a}}o and Christoph Dieterich and Ivan G. Costa}, editor = {Marc{\'{\i}}lio Carlos Pereira de Souto and Maricel G. Kann}, title = {Prediction of Transcription Factor Binding Sites by Integrating DNase Digestion and Histone Modification}, booktitle = {Advances in Bioinformatics and Computational Biology - 7th Brazilian Symposium on Bioinformatics, {BSB} 2012, Campo Grande, Brazil, August 15-17, 2012. Proceedings}, series = {Lecture Notes in Computer Science}, volume = {7409}, pages = {109--119}, publisher = {Springer}, year = {2012}, url = {https://doi.org/10.1007/978-3-642-31927-3\_10}, doi = {10.1007/978-3-642-31927-3\_10}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/wob/GusmaoDC12.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/FrohlerD10, author = {Sebastian Fr{\"{o}}hler and Christoph Dieterich}, title = {{ACCUSA} - accurate {SNP} calling on draft genomes}, journal = {Bioinform.}, volume = {26}, number = {10}, pages = {1364--1365}, year = {2010}, url = {https://doi.org/10.1093/bioinformatics/btq138}, doi = {10.1093/BIOINFORMATICS/BTQ138}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/FrohlerD10.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/almob/RodelspergerD08, author = {Christian R{\"{o}}delsperger and Christoph Dieterich}, title = {Syntenator: Multiple gene order alignments with a gene-specific scoring function}, journal = {Algorithms Mol. Biol.}, volume = {3}, year = {2008}, url = {https://doi.org/10.1186/1748-7188-3-14}, doi = {10.1186/1748-7188-3-14}, timestamp = {Fri, 13 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/almob/RodelspergerD08.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/DieterichFV07, author = {Christoph Dieterich and M. W. Franz and Martin Vingron}, title = {Developments in {CORG:} a gene-centric comparative genomics resource}, journal = {Nucleic Acids Res.}, volume = {35}, number = {Database-Issue}, pages = {32--35}, year = {2007}, url = {https://doi.org/10.1093/nar/gkl977}, doi = {10.1093/NAR/GKL977}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/DieterichFV07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/DieterichRSS07, author = {Christoph Dieterich and Waltraud Roeseler and Patrick Sobetzko and Ralf J. Sommer}, title = {Pristionchus.org: a genome-centric database of the nematode satellite species \emph{Pristionchus pacificus}}, journal = {Nucleic Acids Res.}, volume = {35}, number = {Database-Issue}, pages = {498--502}, year = {2007}, url = {https://doi.org/10.1093/nar/gkl804}, doi = {10.1093/NAR/GKL804}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/DieterichRSS07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/gcb/RodelspergerD07, author = {Christian R{\"{o}}delsperger and Christoph Dieterich}, editor = {Claudia Falter and Alexander Schliep and Joachim Selbig and Martin Vingron and Dirk Walther}, title = {Two Graph-based Approaches for Finding Cross-species Conserved Gene Orders}, booktitle = {Proceedings of the German Conference on Bioinformatics, {GCB} 2007, September 26-28, 2007, Potsdam, Germany}, series = {{LNI}}, volume = {{P-115}}, pages = {163--173}, publisher = {{GI}}, year = {2007}, url = {http://subs.emis.de/LNI/Proceedings/Proceedings115/article1892.html}, timestamp = {Wed, 13 Jan 2021 08:41:29 +0100}, biburl = {https://dblp.org/rec/conf/gcb/RodelspergerD07.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bioinformatics/MichaelDV05, author = {Morris Michael and Christoph Dieterich and Martin Vingron}, title = {SITEBLAST-rapid and sensitive local alignment of genomic sequences employing motif anchors}, journal = {Bioinform.}, volume = {21}, number = {9}, pages = {2093--2094}, year = {2005}, url = {https://doi.org/10.1093/bioinformatics/bti224}, doi = {10.1093/BIOINFORMATICS/BTI224}, timestamp = {Mon, 02 Mar 2020 00:00:00 +0100}, biburl = {https://dblp.org/rec/journals/bioinformatics/MichaelDV05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/bmcbi/CoraHDCPC05, author = {Davide Cor{\`{a}} and Carl Herrmann and Christoph Dieterich and Ferdinando Di Cunto and Paolo Provero and Michele Caselle}, title = {Ab initio identification of putative human transcription factor binding sites by comparative genomics}, journal = {{BMC} Bioinform.}, volume = {6}, pages = {110}, year = {2005}, url = {https://doi.org/10.1186/1471-2105-6-110}, doi = {10.1186/1471-2105-6-110}, timestamp = {Thu, 14 Oct 2021 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/bmcbi/CoraHDCPC05.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/ismb/DieterichRV04, author = {Christoph Dieterich and Sven Rahmann and Martin Vingron}, title = {Functional inference from non-random distributions of conserved predicted transcription factor binding sites}, booktitle = {Proceedings Twelfth International Conference on Intelligent Systems for Molecular Biology/Third European Conference on Computational Biology 2004, Glasgow, UK, July 31-August 4, 2004}, pages = {109--115}, year = {2004}, url = {https://doi.org/10.1093/bioinformatics/bth908}, doi = {10.1093/BIOINFORMATICS/BTH908}, timestamp = {Mon, 26 Jun 2023 01:00:00 +0200}, biburl = {https://dblp.org/rec/conf/ismb/DieterichRV04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/recomb/MankeDV04, author = {Thomas Manke and Christoph Dieterich and Martin Vingron}, editor = {Eleazar Eskin and Christopher T. Workman}, title = {Detecting Functional Modules of Transcription Factor Binding Sites in the Human Genome}, booktitle = {Regulatory Genomics, {RECOMB} 2004 International Workshop, {RRG} 2004, San Diego, CA, USA, March 26-27, 2004, Revised Selected Papers}, series = {Lecture Notes in Computer Science}, volume = {3318}, pages = {14--21}, publisher = {Springer}, year = {2004}, url = {https://doi.org/10.1007/978-3-540-32280-1\_2}, doi = {10.1007/978-3-540-32280-1\_2}, timestamp = {Mon, 13 May 2019 09:30:09 +0200}, biburl = {https://dblp.org/rec/conf/recomb/MankeDV04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/wabi/MichaelDS04, author = {Morris Michael and Christoph Dieterich and Jens Stoye}, editor = {Inge Jonassen and Junhyong Kim}, title = {Suboptimal Local Alignments Across Multiple Scoring Schemes}, booktitle = {Algorithms in Bioinformatics, 4th International Workshop, {WABI} 2004, Bergen, Norway, September 17-21, 2004, Proceedings}, series = {Lecture Notes in Computer Science}, volume = {3240}, pages = {99--110}, publisher = {Springer}, year = {2004}, url = {https://doi.org/10.1007/978-3-540-30219-3\_9}, doi = {10.1007/978-3-540-30219-3\_9}, timestamp = {Tue, 21 Mar 2023 00:00:00 +0100}, biburl = {https://dblp.org/rec/conf/wabi/MichaelDS04.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@article{DBLP:journals/nar/DieterichWRLV03, author = {Christoph Dieterich and Haiyan Wang and Katja Rateitschak and Hannes Luz and Martin Vingron}, title = {{CORG:} a database for COmparative Regulatory Genomics}, journal = {Nucleic Acids Res.}, volume = {31}, number = {1}, pages = {55--57}, year = {2003}, url = {https://doi.org/10.1093/nar/gkg007}, doi = {10.1093/NAR/GKG007}, timestamp = {Sun, 17 May 2020 01:00:00 +0200}, biburl = {https://dblp.org/rec/journals/nar/DieterichWRLV03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/eccb/DieterichHV03, author = {Christoph Dieterich and Ralf Herwig and Martin Vingron}, title = {Exploring potential target genes of signaling pathways by predicting conserved transcription factor binding sites}, booktitle = {Proceedings of the European Conference on Computational Biology {(ECCB} 2003), September 27-30, 2003, Paris, France}, pages = {50--56}, year = {2003}, timestamp = {Mon, 27 Oct 2003 15:56:17 +0100}, biburl = {https://dblp.org/rec/conf/eccb/DieterichHV03.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
@inproceedings{DBLP:conf/eccb/DieterichCWRKV02, author = {Christoph Dieterich and Brian Cusack and Haiyan Wang and Katja Rateitschak and Antje Krause and Martin Vingron}, title = {Annotating regulatory {DNA} based on man-mouse genomic comparison}, booktitle = {Proceedings of the European Conference on Computational Biology {(ECCB} 2002), October 6-9, 2002, Saarbr{\"{u}}cken, Germany}, pages = {84--90}, year = {2002}, timestamp = {Thu, 23 Jun 2016 15:53:27 +0200}, biburl = {https://dblp.org/rec/conf/eccb/DieterichCWRKV02.bib}, bibsource = {dblp computer science bibliography, https://dblp.org} }
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