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ORCIDBibTeX records: Shireen Y. Elhabian
@article{DBLP:journals/mia/BhalodiaEATKW24,
author = {Riddhish Bhalodia and
Shireen Y. Elhabian and
Jadie Adams and
Wenzheng Tao and
Ladislav Kavan and
Ross T. Whitaker},
title = {DeepSSM: {A} blueprint for image-to-shape deep learning models},
journal = {Medical Image Anal.},
volume = {91},
pages = {103034},
year = {2024},
url = {https://doi.org/10.1016/j.media.2023.103034},
doi = {10.1016/J.MEDIA.2023.103034},
timestamp = {Sat, 13 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/mia/BhalodiaEATKW24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iclr/AdamsE24,
author = {Jadie Adams and
Shireen Y. Elhabian},
title = {Point2SSM: Learning Morphological Variations of Anatomies from Point
Clouds},
booktitle = {The Twelfth International Conference on Learning Representations,
{ICLR} 2024, Vienna, Austria, May 7-11, 2024},
publisher = {OpenReview.net},
year = {2024},
url = {https://openreview.net/forum?id=DqziS8DG4M},
timestamp = {Mon, 29 Jul 2024 16:19:40 +0200},
biburl = {https://dblp.org/rec/conf/iclr/AdamsE24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/KatariaKE24,
author = {Tushar Kataria and
Beatrice S. Knudsen and
Shireen Y. Elhabian},
title = {Unsupervised Domain Adaptation for Semantic Segmentation Under Target
Data Scarcity},
booktitle = {{IEEE} International Symposium on Biomedical Imaging, {ISBI} 2024,
Athens, Greece, May 27-30, 2024},
pages = {1--5},
publisher = {{IEEE}},
year = {2024},
url = {https://doi.org/10.1109/ISBI56570.2024.10635646},
doi = {10.1109/ISBI56570.2024.10635646},
timestamp = {Fri, 06 Sep 2024 21:02:06 +0200},
biburl = {https://dblp.org/rec/conf/isbi/KatariaKE24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/XuE24,
author = {Hong Xu and
Shireen Y. Elhabian},
title = {Optimization-Driven Statistical Models of Anatomies Using Radial Basis
Function Shape Representation},
booktitle = {{IEEE} International Symposium on Biomedical Imaging, {ISBI} 2024,
Athens, Greece, May 27-30, 2024},
pages = {1--5},
publisher = {{IEEE}},
year = {2024},
url = {https://doi.org/10.1109/ISBI56570.2024.10635852},
doi = {10.1109/ISBI56570.2024.10635852},
timestamp = {Fri, 06 Sep 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbi/XuE24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miua/IyerAE24,
author = {Krithika Iyer and
Jadie Adams and
Shireen Y. Elhabian},
editor = {Moi Hoon Yap and
Connah Kendrick and
Ardhendu Behera and
Timothy Cootes and
Reyer Zwiggelaar},
title = {SCorP: Statistics-Informed Dense Correspondence Prediction Directly
from Unsegmented Medical Images},
booktitle = {Medical Image Understanding and Analysis - 28th Annual Conference,
{MIUA} 2024, Manchester, UK, July 24-26, 2024, Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {14859},
pages = {142--157},
publisher = {Springer},
year = {2024},
url = {https://doi.org/10.1007/978-3-031-66955-2\_10},
doi = {10.1007/978-3-031-66955-2\_10},
timestamp = {Thu, 22 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miua/IyerAE24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2401-00067,
author = {Hong Xu and
Alan Morris and
Shireen Y. Elhabian},
title = {Particle-Based Shape Modeling for Arbitrary Regions-of-Interest},
journal = {CoRR},
volume = {abs/2401.00067},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2401.00067},
doi = {10.48550/ARXIV.2401.00067},
eprinttype = {arXiv},
eprint = {2401.00067},
timestamp = {Fri, 10 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2401-00067.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2403-11008,
author = {Janmesh Ukey and
Tushar Kataria and
Shireen Y. Elhabian},
title = {{MASSM:} An End-to-End Deep Learning Framework for Multi-Anatomy Statistical
Shape Modeling Directly From Images},
journal = {CoRR},
volume = {abs/2403.11008},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2403.11008},
doi = {10.48550/ARXIV.2403.11008},
eprinttype = {arXiv},
eprint = {2403.11008},
timestamp = {Mon, 08 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2403-11008.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2403-11026,
author = {Abu Zahid Bin Aziz and
Mokshagna Sai Teja Karanam and
Tushar Kataria and
Shireen Y. Elhabian},
title = {EfficientMorph: Parameter-Efficient Transformer-Based Architecture
for 3D Image Registration},
journal = {CoRR},
volume = {abs/2403.11026},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2403.11026},
doi = {10.48550/ARXIV.2403.11026},
eprinttype = {arXiv},
eprint = {2403.11026},
timestamp = {Mon, 08 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2403-11026.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2403-11340,
author = {Tushar Kataria and
Beatrice Knudsen and
Shireen Y. Elhabian},
title = {StainDiffuser: MultiTask Dual Diffusion Model for Virtual Staining},
journal = {CoRR},
volume = {abs/2403.11340},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2403.11340},
doi = {10.48550/ARXIV.2403.11340},
eprinttype = {arXiv},
eprint = {2403.11340},
timestamp = {Thu, 11 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2403-11340.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2403-12290,
author = {Rachaell Nihalaani and
Tushar Kataria and
Jadie Adams and
Shireen Y. Elhabian},
title = {Estimation and Analysis of Slice Propagation Uncertainty in 3D Anatomy
Segmentation},
journal = {CoRR},
volume = {abs/2403.12290},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2403.12290},
doi = {10.48550/ARXIV.2403.12290},
eprinttype = {arXiv},
eprint = {2403.12290},
timestamp = {Thu, 11 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2403-12290.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2404-17967,
author = {Krithika Iyer and
Jadie Adams and
Shireen Y. Elhabian},
title = {SCorP: Statistics-Informed Dense Correspondence Prediction Directly
from Unsegmented Medical Images},
journal = {CoRR},
volume = {abs/2404.17967},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2404.17967},
doi = {10.48550/ARXIV.2404.17967},
eprinttype = {arXiv},
eprint = {2404.17967},
timestamp = {Mon, 27 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2404-17967.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2405-09697,
author = {Jadie Adams and
Krithika Iyer and
Shireen Y. Elhabian},
title = {Weakly Supervised Bayesian Shape Modeling from Unsegmented Medical
Images},
journal = {CoRR},
volume = {abs/2405.09697},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2405.09697},
doi = {10.48550/ARXIV.2405.09697},
eprinttype = {arXiv},
eprint = {2405.09697},
timestamp = {Wed, 12 Jun 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2405-09697.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2405-09707,
author = {Jadie Adams and
Shireen Y. Elhabian},
title = {Point2SSM++: Self-Supervised Learning of Anatomical Shape Models from
Point Clouds},
journal = {CoRR},
volume = {abs/2405.09707},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2405.09707},
doi = {10.48550/ARXIV.2405.09707},
eprinttype = {arXiv},
eprint = {2405.09707},
timestamp = {Wed, 12 Jun 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2405-09707.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2407-01931,
author = {Krithika Iyer and
Shireen Y. Elhabian},
title = {Probabilistic 3D Correspondence Prediction from Sparse Unsegmented
Images},
journal = {CoRR},
volume = {abs/2407.01931},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2407.01931},
doi = {10.48550/ARXIV.2407.01931},
eprinttype = {arXiv},
eprint = {2407.01931},
timestamp = {Fri, 09 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2407-01931.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2407-07254,
author = {K. M. Arefeen Sultan and
Md. Hasibul Husain Hisham and
Benjamin A. Orkild and
Alan Morris and
Eugene G. Kholmovski and
Erik Bieging and
Eugene Kwan and
Ravi Ranjan and
Edward V. R. DiBella and
Shireen Y. Elhabian},
title = {{HAMIL-QA:} Hierarchical Approach to Multiple Instance Learning for
Atrial {LGE} {MRI} Quality Assessment},
journal = {CoRR},
volume = {abs/2407.07254},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2407.07254},
doi = {10.48550/ARXIV.2407.07254},
eprinttype = {arXiv},
eprint = {2407.07254},
timestamp = {Sat, 24 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2407-07254.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2407-15260,
author = {Janmesh Ukey and
Tushar Kataria and
Shireen Y. Elhabian},
title = {Weakly {SSM} : On the Viability of Weakly Supervised Segmentations
for Statistical Shape Modeling},
journal = {CoRR},
volume = {abs/2407.15260},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2407.15260},
doi = {10.48550/ARXIV.2407.15260},
eprinttype = {arXiv},
eprint = {2407.15260},
timestamp = {Mon, 19 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2407-15260.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2407-19113,
author = {Shikha Dubey and
Yosep Chong and
Beatrice Knudsen and
Shireen Y. Elhabian},
title = {VIMs: Virtual Immunohistochemistry Multiplex staining via Text-to-Stain
Diffusion Trained on Uniplex Stains},
journal = {CoRR},
volume = {abs/2407.19113},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2407.19113},
doi = {10.48550/ARXIV.2407.19113},
eprinttype = {arXiv},
eprint = {2407.19113},
timestamp = {Sat, 24 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2407-19113.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/XuME23,
author = {Hong Xu and
Alan Morris and
Shireen Y. Elhabian},
editor = {Christian Wachinger and
Beatriz Paniagua and
Shireen Y. Elhabian and
Jianning Li and
Jan Egger},
title = {Particle-Based Shape Modeling for Arbitrary Regions-of-Interest},
booktitle = {Shape in Medical Imaging - International Workshop, ShapeMI 2023, Held
in Conjunction with {MICCAI} 2023, Vancouver, BC, Canada, October
8, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14350},
pages = {47--54},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-3-031-46914-5\_4},
doi = {10.1007/978-3-031-46914-5\_4},
timestamp = {Fri, 10 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miccai/XuME23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/AdamsE23b,
author = {Jadie Adams and
Shireen Y. Elhabian},
editor = {Carole H. Sudre and
Christian F. Baumgartner and
Adrian V. Dalca and
Raghav Mehta and
Chen Qin and
William M. Wells},
title = {Benchmarking Scalable Epistemic Uncertainty Quantification in Organ
Segmentation},
booktitle = {Uncertainty for Safe Utilization of Machine Learning in Medical Imaging
- 5th International Workshop, {UNSURE} 2023, Held in Conjunction with
{MICCAI} 2023, Vancouver, BC, Canada, October 12, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14291},
pages = {53--63},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-3-031-44336-7\_6},
doi = {10.1007/978-3-031-44336-7\_6},
timestamp = {Wed, 11 Oct 2023 18:49:10 +0200},
biburl = {https://dblp.org/rec/conf/miccai/AdamsE23b.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/KaranamKIE23,
author = {Mokshagna Sai Teja Karanam and
Tushar Kataria and
Krithika Iyer and
Shireen Y. Elhabian},
editor = {Christian Wachinger and
Beatriz Paniagua and
Shireen Y. Elhabian and
Jianning Li and
Jan Egger},
title = {{ADASSM:} Adversarial Data Augmentation in Statistical Shape Models
from Images},
booktitle = {Shape in Medical Imaging - International Workshop, ShapeMI 2023, Held
in Conjunction with {MICCAI} 2023, Vancouver, BC, Canada, October
8, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14350},
pages = {90--104},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-3-031-46914-5\_8},
doi = {10.1007/978-3-031-46914-5\_8},
timestamp = {Thu, 09 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/miccai/KaranamKIE23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/AzizAE23,
author = {Abu Zahid Bin Aziz and
Jadie Adams and
Shireen Y. Elhabian},
editor = {Christian Wachinger and
Beatriz Paniagua and
Shireen Y. Elhabian and
Jianning Li and
Jan Egger},
title = {Progressive DeepSSM: Training Methodology for Image-To-Shape Deep
Models},
booktitle = {Shape in Medical Imaging - International Workshop, ShapeMI 2023, Held
in Conjunction with {MICCAI} 2023, Vancouver, BC, Canada, October
8, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14350},
pages = {157--172},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-3-031-46914-5\_13},
doi = {10.1007/978-3-031-46914-5\_13},
timestamp = {Thu, 09 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/miccai/AzizAE23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/KatariaKE23,
author = {Tushar Kataria and
Beatrice Knudsen and
Shireen Y. Elhabian},
editor = {Zhiyun Xue and
Sameer K. Antani and
Ghada Zamzmi and
Feng Yang and
Sivaramakrishnan Rajaraman and
Sharon Xiaolei Huang and
Marius George Linguraru and
Zhaohui Liang},
title = {To Pretrain or Not to Pretrain? {A} Case Study of Domain-Specific
Pretraining for Semantic Segmentation in Histopathology},
booktitle = {Medical Image Learning with Limited and Noisy Data - Second International
Workshop, MILLanD 2023, Held in Conjunction with {MICCAI} 2023, Vancouver,
BC, Canada, October 8, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14307},
pages = {246--256},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-3-031-44917-8\_24},
doi = {10.1007/978-3-031-44917-8\_24},
timestamp = {Wed, 11 Oct 2023 18:53:23 +0200},
biburl = {https://dblp.org/rec/conf/miccai/KatariaKE23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/AdamsE23a,
author = {Jadie Adams and
Shireen Y. Elhabian},
editor = {Hayit Greenspan and
Anant Madabhushi and
Parvin Mousavi and
Septimiu E. Salcudean and
James Duncan and
Tanveer F. Syeda{-}Mahmood and
Russell H. Taylor},
title = {Fully Bayesian VIB-DeepSSM},
booktitle = {Medical Image Computing and Computer Assisted Intervention - {MICCAI}
2023 - 26th International Conference, Vancouver, BC, Canada, October
8-12, 2023, Proceedings, Part {III}},
series = {Lecture Notes in Computer Science},
volume = {14222},
pages = {346--356},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-3-031-43898-1\_34},
doi = {10.1007/978-3-031-43898-1\_34},
timestamp = {Tue, 13 Aug 2024 14:18:07 +0200},
biburl = {https://dblp.org/rec/conf/miccai/AdamsE23a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/AdamsE23,
author = {Jadie Adams and
Shireen Y. Elhabian},
editor = {Hayit Greenspan and
Anant Madabhushi and
Parvin Mousavi and
Septimiu E. Salcudean and
James Duncan and
Tanveer F. Syeda{-}Mahmood and
Russell H. Taylor},
title = {Can Point Cloud Networks Learn Statistical Shape Models of Anatomies?},
booktitle = {Medical Image Computing and Computer Assisted Intervention - {MICCAI}
2023 - 26th International Conference, Vancouver, BC, Canada, October
8-12, 2023, Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {14220},
pages = {486--496},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-3-031-43907-0\_47},
doi = {10.1007/978-3-031-43907-0\_47},
timestamp = {Tue, 13 Aug 2024 14:18:07 +0200},
biburl = {https://dblp.org/rec/conf/miccai/AdamsE23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/XuE23,
author = {Hong Xu and
Shireen Y. Elhabian},
editor = {Hayit Greenspan and
Anant Madabhushi and
Parvin Mousavi and
Septimiu E. Salcudean and
James Duncan and
Tanveer F. Syeda{-}Mahmood and
Russell H. Taylor},
title = {Image2SSM: Reimagining Statistical Shape Models from Images with Radial
Basis Functions},
booktitle = {Medical Image Computing and Computer Assisted Intervention - {MICCAI}
2023 - 26th International Conference, Vancouver, BC, Canada, October
8-12, 2023, Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {14220},
pages = {508--517},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-3-031-43907-0\_49},
doi = {10.1007/978-3-031-43907-0\_49},
timestamp = {Fri, 10 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miccai/XuE23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/IyerE23,
author = {Krithika Iyer and
Shireen Y. Elhabian},
editor = {Hayit Greenspan and
Anant Madabhushi and
Parvin Mousavi and
Septimiu E. Salcudean and
James Duncan and
Tanveer F. Syeda{-}Mahmood and
Russell H. Taylor},
title = {Mesh2SSM: From Surface Meshes to Statistical Shape Models of Anatomy},
booktitle = {Medical Image Computing and Computer Assisted Intervention - {MICCAI}
2023 - 26th International Conference, Vancouver, BC, Canada, October
8-12, 2023, Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {14220},
pages = {615--625},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-3-031-43907-0\_59},
doi = {10.1007/978-3-031-43907-0\_59},
timestamp = {Thu, 05 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miccai/IyerE23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/midl/UkeyE23,
author = {Janmesh Ukey and
Shireen Y. Elhabian},
editor = {Ipek Oguz and
Jack H. Noble and
Xiaoxiao Li and
Martin Styner and
Christian Baumgartner and
Mirabela Rusu and
Tobias Heimann and
Despina Kontos and
Bennett A. Landman and
Benoit M. Dawant},
title = {Image2SSM: Localization-aware Deep Learning Framework for Statistical
Shape Modeling Directly from Images},
booktitle = {Medical Imaging with Deep Learning, {MIDL} 2023, 10-12 July 2023,
Nashville, TN, {USA}},
series = {Proceedings of Machine Learning Research},
volume = {227},
pages = {1910--1922},
publisher = {{PMLR}},
year = {2023},
url = {https://proceedings.mlr.press/v227/ukey24a.html},
timestamp = {Tue, 20 Feb 2024 17:19:52 +0100},
biburl = {https://dblp.org/rec/conf/midl/UkeyE23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mlmi-ws/DubeyKKE23,
author = {Shikha Dubey and
Tushar Kataria and
Beatrice Knudsen and
Shireen Y. Elhabian},
editor = {Xiaohuan Cao and
Xuanang Xu and
Islem Rekik and
Zhiming Cui and
Xi Ouyang},
title = {Structural Cycle {GAN} for Virtual Immunohistochemistry Staining of
Gland Markers in the Colon},
booktitle = {Machine Learning in Medical Imaging - 14th International Workshop,
{MLMI} 2023, Held in Conjunction with {MICCAI} 2023, Vancouver, BC,
Canada, October 8, 2023, Proceedings, Part {II}},
series = {Lecture Notes in Computer Science},
volume = {14349},
pages = {447--456},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-3-031-45676-3\_45},
doi = {10.1007/978-3-031-45676-3\_45},
timestamp = {Wed, 18 Oct 2023 20:03:54 +0200},
biburl = {https://dblp.org/rec/conf/mlmi-ws/DubeyKKE23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/HallGECP0EBDYKT23,
author = {Mary W. Hall and
Ganesh Gopalakrishnan and
Eric Eide and
Johanna Cohoon and
Jeff M. Phillips and
Mu Zhang and
Shireen Y. Elhabian and
Aditya Bhaskara and
Harvey Dam and
Artem Yadrov and
Tushar Kataria and
Amir Mohammad Tavakkoli and
Sameeran Joshi and
Mokshagna Sai Teja Karanam},
title = {An {NSF} {REU} Site Based on Trust and Reproducibility of Intelligent
Computation: Experience Report},
booktitle = {Proceedings of the {SC} '23 Workshops of The International Conference
on High Performance Computing, Network, Storage, and Analysis, {SC-W}
2023, Denver, CO, USA, November 12-17, 2023},
pages = {343--349},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3624062.3624100},
doi = {10.1145/3624062.3624100},
timestamp = {Tue, 28 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/sc/HallGECP0EBDYKT23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/stacom-ws/SultanOMKBKRBE23,
author = {K. M. Arefeen Sultan and
Benjamin A. Orkild and
Alan Morris and
Eugene G. Kholmovski and
Erik Bieging and
Eugene Kwan and
Ravi Ranjan and
Edward V. R. Di Bella and
Shireen Y. Elhabian},
editor = {Oscar Camara and
Esther Puyol{-}Ant{\'{o}}n and
Maxime Sermesant and
Avan Suinesiaputra and
Qian Tao and
Chengyan Wang and
Alistair A. Young},
title = {Two-Stage Deep Learning Framework for Quality Assessment of Left Atrial
Late Gadolinium Enhanced {MRI} Images},
booktitle = {Statistical Atlases and Computational Models of the Heart. Regular
and CMRxRecon Challenge Papers - 14th International Workshop, {STACOM}
2023, Held in Conjunction with {MICCAI} 2023, Vancouver, BC, Canada,
October 12, 2023, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {14507},
pages = {230--239},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-3-031-52448-6\_22},
doi = {10.1007/978-3-031-52448-6\_22},
timestamp = {Sun, 18 Feb 2024 17:03:24 +0100},
biburl = {https://dblp.org/rec/conf/stacom-ws/SultanOMKBKRBE23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@proceedings{DBLP:conf/miccai/2023shapemi,
editor = {Christian Wachinger and
Beatriz Paniagua and
Shireen Y. Elhabian and
Jianning Li and
Jan Egger},
title = {Shape in Medical Imaging - International Workshop, ShapeMI 2023, Held
in Conjunction with {MICCAI} 2023, Vancouver, BC, Canada, October
8, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {14350},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-3-031-46914-5},
doi = {10.1007/978-3-031-46914-5},
isbn = {978-3-031-46913-8},
timestamp = {Thu, 09 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/miccai/2023shapemi.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2305-05610,
author = {Jadie Adams and
Shireen Y. Elhabian},
title = {Can point cloud networks learn statistical shape models of anatomies?},
journal = {CoRR},
volume = {abs/2305.05610},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2305.05610},
doi = {10.48550/ARXIV.2305.05610},
eprinttype = {arXiv},
eprint = {2305.05610},
timestamp = {Mon, 15 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2305-05610.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2305-05789,
author = {Tushar Kataria and
Beatrice Knudsen and
Shireen Y. Elhabian},
title = {Unsupervised Domain Adaptation for Semantic Segmentation via Feature-space
Density Matching},
journal = {CoRR},
volume = {abs/2305.05789},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2305.05789},
doi = {10.48550/ARXIV.2305.05789},
eprinttype = {arXiv},
eprint = {2305.05789},
timestamp = {Tue, 16 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2305-05789.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2305-05797,
author = {Jadie Adams and
Shireen Y. Elhabian},
title = {Fully Bayesian VIB-DeepSSM},
journal = {CoRR},
volume = {abs/2305.05797},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2305.05797},
doi = {10.48550/ARXIV.2305.05797},
eprinttype = {arXiv},
eprint = {2305.05797},
timestamp = {Tue, 16 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2305-05797.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2305-07805,
author = {Krithika Iyer and
Shireen Y. Elhabian},
title = {Mesh2SSM: From Surface Meshes to Statistical Shape Models of Anatomy},
journal = {CoRR},
volume = {abs/2305.07805},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2305.07805},
doi = {10.48550/ARXIV.2305.07805},
eprinttype = {arXiv},
eprint = {2305.07805},
timestamp = {Wed, 17 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2305-07805.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2305-11946,
author = {Hong Xu and
Shireen Y. Elhabian},
title = {Image2SSM: Reimagining Statistical Shape Models from Images with Radial
Basis Functions},
journal = {CoRR},
volume = {abs/2305.11946},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2305.11946},
doi = {10.48550/ARXIV.2305.11946},
eprinttype = {arXiv},
eprint = {2305.11946},
timestamp = {Fri, 10 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2305-11946.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2305-14486,
author = {Jadie Adams and
Shireen Y. Elhabian},
title = {Point2SSM: Learning Morphological Variations of Anatomies from Point
Cloud},
journal = {CoRR},
volume = {abs/2305.14486},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2305.14486},
doi = {10.48550/ARXIV.2305.14486},
eprinttype = {arXiv},
eprint = {2305.14486},
timestamp = {Tue, 06 Jun 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2305-14486.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2307-03273,
author = {Mokshagna Sai Teja Karanam and
Tushar Kataria and
Shireen Y. Elhabian},
title = {{ADASSM:} Adversarial Data Augmentation in Statistical Shape Models
From Images},
journal = {CoRR},
volume = {abs/2307.03273},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2307.03273},
doi = {10.48550/ARXIV.2307.03273},
eprinttype = {arXiv},
eprint = {2307.03273},
timestamp = {Mon, 10 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2307-03273.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2307-03275,
author = {Tushar Kataria and
Beatrice Knudsen and
Shireen Y. Elhabian},
title = {To pretrain or not to pretrain? {A} case study of domain-specific
pretraining for semantic segmentation in histopathology},
journal = {CoRR},
volume = {abs/2307.03275},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2307.03275},
doi = {10.48550/ARXIV.2307.03275},
eprinttype = {arXiv},
eprint = {2307.03275},
timestamp = {Mon, 10 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2307-03275.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2308-07506,
author = {Jadie Adams and
Shireen Y. Elhabian},
title = {Benchmarking Scalable Epistemic Uncertainty Quantification in Organ
Segmentation},
journal = {CoRR},
volume = {abs/2308.07506},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2308.07506},
doi = {10.48550/ARXIV.2308.07506},
eprinttype = {arXiv},
eprint = {2308.07506},
timestamp = {Thu, 24 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2308-07506.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2308-13182,
author = {Shikha Dubey and
Tushar Kataria and
Beatrice Knudsen and
Shireen Y. Elhabian},
title = {Structural Cycle {GAN} for Virtual Immunohistochemistry Staining of
Gland Markers in the Colon},
journal = {CoRR},
volume = {abs/2308.13182},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2308.13182},
doi = {10.48550/ARXIV.2308.13182},
eprinttype = {arXiv},
eprint = {2308.13182},
timestamp = {Fri, 01 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2308-13182.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2310-01529,
author = {Abu Zahid Bin Aziz and
Jadie Adams and
Shireen Y. Elhabian},
title = {Progressive DeepSSM: Training Methodology for Image-To-Shape Deep
Models},
journal = {CoRR},
volume = {abs/2310.01529},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2310.01529},
doi = {10.48550/ARXIV.2310.01529},
eprinttype = {arXiv},
eprint = {2310.01529},
timestamp = {Thu, 19 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2310-01529.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2310-08805,
author = {K. M. Arefeen Sultan and
Benjamin A. Orkild and
Alan Morris and
Eugene G. Kholmovski and
Erik Bieging and
Eugene Kwan and
Ravi Ranjan and
Edward DiBella and
Shireen Y. Elhabian},
title = {Two-Stage Deep Learning Framework for Quality Assessment of Left Atrial
Late Gadolinium Enhanced {MRI} Images},
journal = {CoRR},
volume = {abs/2310.08805},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2310.08805},
doi = {10.48550/ARXIV.2310.08805},
eprinttype = {arXiv},
eprint = {2310.08805},
timestamp = {Thu, 26 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2310-08805.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mia/GoparajuIBHHADJ22,
author = {Anupama Goparaju and
Krithika Iyer and
Alexandre B{\^{o}}ne and
Nan Hu and
Heath B. Henninger and
Andrew E. Anderson and
Stanley Durrleman and
Matthijs Jacxsens and
Alan Morris and
Ibolya Csecs and
Nassir Marrouche and
Shireen Y. Elhabian},
title = {Benchmarking off-the-shelf statistical shape modeling tools in clinical
applications},
journal = {Medical Image Anal.},
volume = {76},
pages = {102271},
year = {2022},
url = {https://doi.org/10.1016/j.media.2021.102271},
doi = {10.1016/J.MEDIA.2021.102271},
timestamp = {Tue, 08 Feb 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/mia/GoparajuIBHHADJ22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ml/SahaEW22,
author = {Surojit Saha and
Shireen Y. Elhabian and
Ross T. Whitaker},
title = {GENs: generative encoding networks},
journal = {Mach. Learn.},
volume = {111},
number = {11},
pages = {4003--4038},
year = {2022},
url = {https://doi.org/10.1007/s10994-022-06220-w},
doi = {10.1007/S10994-022-06220-W},
timestamp = {Tue, 29 Nov 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ml/SahaEW22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cinc/TateZEOBDNBM22,
author = {Jess D. Tate and
Nejib Zemzemi and
Shireen Y. Elhabian and
Be{\'{a}}ta Ondrusov{\'{a}} and
Machteld J. Boonstra and
Peter M. van Dam and
Akil Narayan and
Dana H. Brooks and
Rob S. MacLeod},
title = {Segmentation Uncertainty Quantification in Cardiac Propagation Models},
booktitle = {Computing in Cardiology, CinC 2022, Tampere, Finland, September 4-7,
2022},
pages = {1--4},
publisher = {{IEEE}},
year = {2022},
url = {https://doi.org/10.22489/CinC.2022.419},
doi = {10.22489/CINC.2022.419},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cinc/TateZEOBDNBM22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/AdamsE22,
author = {Jadie Adams and
Shireen Y. Elhabian},
editor = {Linwei Wang and
Qi Dou and
P. Thomas Fletcher and
Stefanie Speidel and
Shuo Li},
title = {From Images to Probabilistic Anatomical Shapes: {A} Deep Variational
Bottleneck Approach},
booktitle = {Medical Image Computing and Computer Assisted Intervention - {MICCAI}
2022 - 25th International Conference, Singapore, September 18-22,
2022, Proceedings, Part {II}},
series = {Lecture Notes in Computer Science},
volume = {13432},
pages = {474--484},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-16434-7\_46},
doi = {10.1007/978-3-031-16434-7\_46},
timestamp = {Tue, 13 Dec 2022 14:39:06 +0100},
biburl = {https://dblp.org/rec/conf/miccai/AdamsE22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/stacom-ws/AdamsKME22,
author = {Jadie Adams and
Nawazish Khan and
Alan Morris and
Shireen Y. Elhabian},
editor = {Oscar Camara and
Esther Puyol{-}Ant{\'{o}}n and
Chen Qin and
Maxime Sermesant and
Avan Suinesiaputra and
Shuo Wang and
Alistair A. Young},
title = {Spatiotemporal Cardiac Statistical Shape Modeling: {A} Data-Driven
Approach},
booktitle = {Statistical Atlases and Computational Models of the Heart. Regular
and CMRxMotion Challenge Papers - 13th International Workshop, {STACOM}
2022, Held in Conjunction with {MICCAI} 2022, Singapore, September
18, 2022, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {13593},
pages = {143--156},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23443-9\_14},
doi = {10.1007/978-3-031-23443-9\_14},
timestamp = {Tue, 20 Aug 2024 07:54:44 +0200},
biburl = {https://dblp.org/rec/conf/stacom-ws/AdamsKME22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/stacom-ws/IyerMZKOKE22,
author = {Krithika Iyer and
Alan Morris and
Brian Zenger and
Karthik Karanth and
Benjamin A. Orkild and
Oleksandre Korshak and
Shireen Y. Elhabian},
editor = {Oscar Camara and
Esther Puyol{-}Ant{\'{o}}n and
Chen Qin and
Maxime Sermesant and
Avan Suinesiaputra and
Shuo Wang and
Alistair A. Young},
title = {Statistical Shape Modeling of Biventricular Anatomy with Shared Boundaries},
booktitle = {Statistical Atlases and Computational Models of the Heart. Regular
and CMRxMotion Challenge Papers - 13th International Workshop, {STACOM}
2022, Held in Conjunction with {MICCAI} 2022, Singapore, September
18, 2022, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {13593},
pages = {302--316},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-23443-9\_28},
doi = {10.1007/978-3-031-23443-9\_28},
timestamp = {Fri, 03 Feb 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/stacom-ws/IyerMZKOKE22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2201-03481,
author = {Wenzheng Tao and
Riddhish Bhalodia and
Shireen Y. Elhabian},
title = {Learning Population-level Shape Statistics and Anatomy Segmentation
From Images: {A} Joint Deep Learning Model},
journal = {CoRR},
volume = {abs/2201.03481},
year = {2022},
url = {https://arxiv.org/abs/2201.03481},
eprinttype = {arXiv},
eprint = {2201.03481},
timestamp = {Fri, 21 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2201-03481.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2205-06862,
author = {Jadie Adams and
Shireen Y. Elhabian},
title = {From Images to Probabilistic Anatomical Shapes: {A} Deep Variational
Bottleneck Approach},
journal = {CoRR},
volume = {abs/2205.06862},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2205.06862},
doi = {10.48550/ARXIV.2205.06862},
eprinttype = {arXiv},
eprint = {2205.06862},
timestamp = {Tue, 17 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2205-06862.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2205-13061,
author = {Krithika Iyer and
Riddhish Bhalodia and
Shireen Y. Elhabian},
title = {RENs: Relevance Encoding Networks},
journal = {CoRR},
volume = {abs/2205.13061},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2205.13061},
doi = {10.48550/ARXIV.2205.13061},
eprinttype = {arXiv},
eprint = {2205.13061},
timestamp = {Mon, 30 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2205-13061.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2209-02706,
author = {Krithika Iyer and
Alan Morris and
Brian Zenger and
Karthik Karanth and
Benjamin A. Orkild and
Oleksandre Korshak and
Shireen Y. Elhabian},
title = {Statistical Shape Modeling of Biventricular Anatomy with Shared Boundaries},
journal = {CoRR},
volume = {abs/2209.02706},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2209.02706},
doi = {10.48550/ARXIV.2209.02706},
eprinttype = {arXiv},
eprint = {2209.02706},
timestamp = {Thu, 29 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2209-02706.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2209-02736,
author = {Jadie Adams and
Nawazish Khan and
Alan Morris and
Shireen Y. Elhabian},
title = {Spatiotemporal Cardiac Statistical Shape Modeling: {A} Data-Driven
Approach},
journal = {CoRR},
volume = {abs/2209.02736},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2209.02736},
doi = {10.48550/ARXIV.2209.02736},
eprinttype = {arXiv},
eprint = {2209.02736},
timestamp = {Mon, 26 Sep 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2209-02736.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mia/BhalodiaEKW21,
author = {Riddhish Bhalodia and
Shireen Y. Elhabian and
Ladislav Kavan and
Ross T. Whitaker},
title = {Leveraging unsupervised image registration for discovery of landmark
shape descriptor},
journal = {Medical Image Anal.},
volume = {73},
pages = {102157},
year = {2021},
url = {https://doi.org/10.1016/j.media.2021.102157},
doi = {10.1016/J.MEDIA.2021.102157},
timestamp = {Mon, 04 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/mia/BhalodiaEKW21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cinc/TateEZGDBM21,
author = {Jess D. Tate and
Shireen Y. Elhabian and
Nejib Zemzemi and
Wilson W. Good and
Peter M. van Dam and
Dana H. Brooks and
Rob S. MacLeod},
title = {A Cardiac Shape Model for Segmentation Uncertainty Quantification},
booktitle = {Computing in Cardiology, CinC 2021, Brno, Czech Republic, September
13-15, 2021},
pages = {1--4},
publisher = {{IEEE}},
year = {2021},
url = {https://doi.org/10.23919/CinC53138.2021.9662917},
doi = {10.23919/CINC53138.2021.9662917},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cinc/TateEZGDBM21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2102-10493,
author = {Praful Agrawal and
Ross T. Whitaker and
Shireen Y. Elhabian},
title = {Learning Deep Features for Shape Correspondence with Domain Invariance},
journal = {CoRR},
volume = {abs/2102.10493},
year = {2021},
url = {https://arxiv.org/abs/2102.10493},
eprinttype = {arXiv},
eprint = {2102.10493},
timestamp = {Wed, 24 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2102-10493.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2110-07152,
author = {Riddhish Bhalodia and
Shireen Y. Elhabian and
Jadie Adams and
Wenzheng Tao and
Ladislav Kavan and
Ross T. Whitaker},
title = {DeepSSM: {A} Blueprint for Image-to-Shape Deep Learning Models},
journal = {CoRR},
volume = {abs/2110.07152},
year = {2021},
url = {https://arxiv.org/abs/2110.07152},
eprinttype = {arXiv},
eprint = {2110.07152},
timestamp = {Fri, 22 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2110-07152.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2111-07009,
author = {Riddhish Bhalodia and
Shireen Y. Elhabian and
Ladislav Kavan and
Ross T. Whitaker},
title = {Leveraging Unsupervised Image Registration for Discovery of Landmark
Shape Descriptor},
journal = {CoRR},
volume = {abs/2111.07009},
year = {2021},
url = {https://arxiv.org/abs/2111.07009},
eprinttype = {arXiv},
eprint = {2111.07009},
timestamp = {Tue, 16 Nov 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2111-07009.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/AgrawalWE20,
author = {Praful Agrawal and
Ross T. Whitaker and
Shireen Y. Elhabian},
title = {An Optimal, Generative Model for Estimating Multi-Label Probabilistic
Maps},
journal = {{IEEE} Trans. Medical Imaging},
volume = {39},
number = {7},
pages = {2316--2326},
year = {2020},
url = {https://doi.org/10.1109/TMI.2020.2968917},
doi = {10.1109/TMI.2020.2968917},
timestamp = {Thu, 13 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tmi/AgrawalWE20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aaai/XingEKWZ20,
author = {Wei W. Xing and
Shireen Y. Elhabian and
Robert Michael Kirby and
Ross T. Whitaker and
Shandian Zhe},
title = {Infinite ShapeOdds: Nonparametric Bayesian Models for Shape Representations},
booktitle = {The Thirty-Fourth {AAAI} Conference on Artificial Intelligence, {AAAI}
2020, The Thirty-Second Innovative Applications of Artificial Intelligence
Conference, {IAAI} 2020, The Tenth {AAAI} Symposium on Educational
Advances in Artificial Intelligence, {EAAI} 2020, New York, NY, USA,
February 7-12, 2020},
pages = {6462--6469},
publisher = {{AAAI} Press},
year = {2020},
url = {https://doi.org/10.1609/aaai.v34i04.6118},
doi = {10.1609/AAAI.V34I04.6118},
timestamp = {Fri, 08 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/aaai/XingEKWZ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/accv/BhalodiaLE20,
author = {Riddhish Bhalodia and
Iain Lee and
Shireen Y. Elhabian},
editor = {Hiroshi Ishikawa and
Cheng{-}Lin Liu and
Tom{\'{a}}s Pajdla and
Jianbo Shi},
title = {dpVAEs: Fixing Sample Generation for Regularized VAEs},
booktitle = {Computer Vision - {ACCV} 2020 - 15th Asian Conference on Computer
Vision, Kyoto, Japan, November 30 - December 4, 2020, Revised Selected
Papers, Part {IV}},
series = {Lecture Notes in Computer Science},
volume = {12625},
pages = {643--660},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-69538-5\_39},
doi = {10.1007/978-3-030-69538-5\_39},
timestamp = {Tue, 02 Mar 2021 08:39:09 +0100},
biburl = {https://dblp.org/rec/conf/accv/BhalodiaLE20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cinc/MorganKZRPFMRKW20,
author = {Ashley E. Morgan and
Atefeh Kashani and
Brian Zenger and
Lindsay C. Rupp and
Maura D. Perez and
Markus D. Foote and
Alan K. Morris and
Mark B. Ratcliffe and
Jiwon J. Kim and
Jonathan W. Weinsaft and
Vikas Sharma and
Rob S. MacLeod and
Shireen Y. Elhabian},
title = {Right Ventricular Shape Distortion in Tricuspid Regurgitation},
booktitle = {Computing in Cardiology, CinC 2020, Rimini, Italy, September 13-16,
2020},
pages = {1--4},
publisher = {{IEEE}},
year = {2020},
url = {https://doi.org/10.22489/CinC.2020.346},
doi = {10.22489/CINC.2020.346},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cinc/MorganKZRPFMRKW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cinc/MorrisKMCE20,
author = {Alan Morris and
Eugene G. Kholmovski and
Nassir Marrouche and
Joshua Cates and
Shireen Y. Elhabian},
title = {An Image-based Approach for 3D Left Atrium Functional Measurements},
booktitle = {Computing in Cardiology, CinC 2020, Rimini, Italy, September 13-16,
2020},
pages = {1--4},
publisher = {{IEEE}},
year = {2020},
url = {https://doi.org/10.22489/CinC.2020.459},
doi = {10.22489/CINC.2020.459},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cinc/MorrisKMCE20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/XuTE20,
author = {Hong Xu and
David E. Timm and
Shireen Y. Elhabian},
editor = {Anne L. Martel and
Purang Abolmaesumi and
Danail Stoyanov and
Diana Mateus and
Maria A. Zuluaga and
S. Kevin Zhou and
Daniel Racoceanu and
Leo Joskowicz},
title = {Attention-Guided Quality Assessment for Automated Cryo-EM Grid Screening},
booktitle = {Medical Image Computing and Computer Assisted Intervention - {MICCAI}
2020 - 23rd International Conference, Lima, Peru, October 4-8, 2020,
Proceedings, Part {V}},
series = {Lecture Notes in Computer Science},
volume = {12265},
pages = {56--65},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-59722-1\_6},
doi = {10.1007/978-3-030-59722-1\_6},
timestamp = {Fri, 10 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miccai/XuTE20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/AdamsBE20,
author = {Jadie Adams and
Riddhish Bhalodia and
Shireen Y. Elhabian},
editor = {Martin Reuter and
Christian Wachinger and
Herv{\'{e}} Lombaert and
Beatriz Paniagua and
Orcun Goksel and
Islem Rekik},
title = {Uncertain-DeepSSM: From Images to Probabilistic Shape Models},
booktitle = {Shape in Medical Imaging - International Workshop, ShapeMI 2020, Held
in Conjunction with {MICCAI} 2020, Lima, Peru, October 4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12474},
pages = {57--72},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-61056-2\_5},
doi = {10.1007/978-3-030-61056-2\_5},
timestamp = {Thu, 08 Oct 2020 13:28:10 +0200},
biburl = {https://dblp.org/rec/conf/miccai/AdamsBE20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/AgrawalMEAW20,
author = {Praful Agrawal and
Joseph D. Mozingo and
Shireen Y. Elhabian and
Andrew E. Anderson and
Ross T. Whitaker},
editor = {Martin Reuter and
Christian Wachinger and
Herv{\'{e}} Lombaert and
Beatriz Paniagua and
Orcun Goksel and
Islem Rekik},
title = {Combined Estimation of Shape and Pose for Statistical Analysis of
Articulating Joints},
booktitle = {Shape in Medical Imaging - International Workshop, ShapeMI 2020, Held
in Conjunction with {MICCAI} 2020, Lima, Peru, October 4, 2020, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {12474},
pages = {111--121},
publisher = {Springer},
year = {2020},
url = {https://doi.org/10.1007/978-3-030-61056-2\_9},
doi = {10.1007/978-3-030-61056-2\_9},
timestamp = {Wed, 07 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miccai/AgrawalMEAW20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2007-05593,
author = {Hong Xu and
David E. Timm and
Shireen Y. Elhabian},
title = {Attention-guided Quality Assessment for Automated Cryo-EM Grid Screening},
journal = {CoRR},
volume = {abs/2007.05593},
year = {2020},
url = {https://arxiv.org/abs/2007.05593},
eprinttype = {arXiv},
eprint = {2007.05593},
timestamp = {Fri, 10 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2007-05593.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2007-06516,
author = {Jadie Adams and
Riddhish Bhalodia and
Shireen Y. Elhabian},
title = {Uncertain-DeepSSM: From Images to Probabilistic Shape Models},
journal = {CoRR},
volume = {abs/2007.06516},
year = {2020},
url = {https://arxiv.org/abs/2007.06516},
eprinttype = {arXiv},
eprint = {2007.06516},
timestamp = {Tue, 21 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2007-06516.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2009-02878,
author = {Anupama Goparaju and
Alexandre B{\^{o}}ne and
Nan Hu and
Heath B. Henninger and
Andrew E. Anderson and
Stanley Durrleman and
Matthijs Jacxsens and
Alan Morris and
Ibolya Csecs and
Nassir Marrouche and
Shireen Y. Elhabian},
title = {Benchmarking off-the-shelf statistical shape modeling tools in clinical
applications},
journal = {CoRR},
volume = {abs/2009.02878},
year = {2020},
url = {https://arxiv.org/abs/2009.02878},
eprinttype = {arXiv},
eprint = {2009.02878},
timestamp = {Thu, 17 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2009-02878.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2010-15283,
author = {Surojit Saha and
Shireen Y. Elhabian and
Ross T. Whitaker},
title = {GENs: Generative Encoding Networks},
journal = {CoRR},
volume = {abs/2010.15283},
year = {2020},
url = {https://arxiv.org/abs/2010.15283},
eprinttype = {arXiv},
eprint = {2010.15283},
timestamp = {Tue, 03 Nov 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2010-15283.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2012-14901,
author = {Daniel J. Perry and
Vahid Keshavarzzadeh and
Shireen Y. Elhabian and
Robert M. Kirby and
Michael Gleicher and
Ross T. Whitaker},
title = {Visualization of topology optimization designs with representative
subset selection},
journal = {CoRR},
volume = {abs/2012.14901},
year = {2020},
url = {https://arxiv.org/abs/2012.14901},
eprinttype = {arXiv},
eprint = {2012.14901},
timestamp = {Fri, 08 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2012-14901.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cars/SultanaAEWBGCRA19,
author = {Sharmin Sultana and
Praful Agrawal and
Shireen Y. Elhabian and
Ross T. Whitaker and
Jason E. Blatt and
Benjamin Gilles and
Justin S. Cetas and
Tanweer Rashid and
Michel A. Audette},
title = {Medial axis segmentation of cranial nerves using shape statistics-aware
discrete deformable models},
journal = {Int. J. Comput. Assist. Radiol. Surg.},
volume = {14},
number = {11},
pages = {1955--1967},
year = {2019},
url = {https://doi.org/10.1007/s11548-019-02014-z},
doi = {10.1007/S11548-019-02014-Z},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cars/SultanaAEWBGCRA19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cinc/BhalodiaSMCWKME19,
author = {Riddhish Bhalodia and
Archanasri Subramanian and
Alan Morris and
Joshua Cates and
Ross T. Whitaker and
Evgueni Kholmovski and
Nassir Marrouche and
Shireen Y. Elhabian},
title = {Does Alignment in Statistical Shape Modeling of Left Atrium Appendage
Impact Stroke Prediction?},
booktitle = {46th Computing in Cardiology, CinC 2019, Singapore, September 8-11,
2019},
pages = {1--4},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.22489/CinC.2019.200},
doi = {10.22489/CINC.2019.200},
timestamp = {Fri, 20 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cinc/BhalodiaSMCWKME19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cinc/GoparajuMCBDFKM19,
author = {Anupama Goparaju and
Alan Morris and
Ibolya Csecs and
Riddhish Bhalodia and
Tom Ditter and
Kristine Fuimaono and
Evgueni Kholmovski and
Nassir Marrouche and
Joshua Cates and
Shireen Y. Elhabian},
title = {Interatrial Septum and Appendage Ostium in Atrial Fibrillation Patients:
{A} Population Study},
booktitle = {46th Computing in Cardiology, CinC 2019, Singapore, September 8-11,
2019},
pages = {1--3},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.22489/CinC.2019.439},
doi = {10.22489/CINC.2019.439},
timestamp = {Fri, 20 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cinc/GoparajuMCBDFKM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cinc/ParikhGBLMCKME19,
author = {Shalin Parikh and
Anupama Goparaju and
Riddhish Bhalodia and
Bosten Loveless and
Alan Morris and
Joshua Cates and
Evgueni Kholmovski and
Nassir Marrouche and
Shireen Y. Elhabian},
title = {Efficient Segmentation Pipeline Using Diffeomorphic Image Registration:
{A} Validation Study},
booktitle = {46th Computing in Cardiology, CinC 2019, Singapore, September 8-11,
2019},
pages = {1--4},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.22489/CinC.2019.364},
doi = {10.22489/CINC.2019.364},
timestamp = {Fri, 20 Oct 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cinc/ParikhGBLMCKME19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/BhalodiaEKW19,
author = {Riddhish Bhalodia and
Shireen Y. Elhabian and
Ladislav Kavan and
Ross T. Whitaker},
editor = {Dinggang Shen and
Tianming Liu and
Terry M. Peters and
Lawrence H. Staib and
Caroline Essert and
Sean Zhou and
Pew{-}Thian Yap and
Ali R. Khan},
title = {A Cooperative Autoencoder for Population-Based Regularization of {CNN}
Image Registration},
booktitle = {Medical Image Computing and Computer Assisted Intervention - {MICCAI}
2019 - 22nd International Conference, Shenzhen, China, October 13-17,
2019, Proceedings, Part {II}},
series = {Lecture Notes in Computer Science},
volume = {11765},
pages = {391--400},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-32245-8\_44},
doi = {10.1007/978-3-030-32245-8\_44},
timestamp = {Mon, 19 Feb 2024 14:24:13 +0100},
biburl = {https://dblp.org/rec/conf/miccai/BhalodiaEKW19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1903-06260,
author = {Tim Sodergren and
Riddhish Bhalodia and
Ross T. Whitaker and
Joshua Cates and
Nassir Marrouche and
Shireen Y. Elhabian},
title = {Mixture Modeling of Global Shape Priors and Autoencoding Local Intensity
Priors for Left Atrium Segmentation},
journal = {CoRR},
volume = {abs/1903.06260},
year = {2019},
url = {http://arxiv.org/abs/1903.06260},
eprinttype = {arXiv},
eprint = {1903.06260},
timestamp = {Mon, 01 Apr 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1903-06260.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1906-05441,
author = {Riddhish Bhalodia and
Shireen Y. Elhabian and
Ladislav Kavan and
Ross T. Whitaker},
title = {CoopSubNet: Cooperating Subnetwork for Data-Driven Regularization
of Deep Networks under Limited Training Budgets},
journal = {CoRR},
volume = {abs/1906.05441},
year = {2019},
url = {http://arxiv.org/abs/1906.05441},
eprinttype = {arXiv},
eprint = {1906.05441},
timestamp = {Mon, 24 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1906-05441.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1907-00109,
author = {Alessandro Ferrero and
Shireen Y. Elhabian and
Ross T. Whitaker},
title = {SetGANs: Enforcing Distributional Accuracy in Generative Adversarial
Networks},
journal = {CoRR},
volume = {abs/1907.00109},
year = {2019},
url = {http://arxiv.org/abs/1907.00109},
eprinttype = {arXiv},
eprint = {1907.00109},
timestamp = {Mon, 08 Jul 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1907-00109.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1908-05825,
author = {Riddhish Bhalodia and
Shireen Y. Elhabian and
Ladislav Kavan and
Ross T. Whitaker},
title = {A Cooperative Autoencoder for Population-Based Regularization of {CNN}
Image Registration},
journal = {CoRR},
volume = {abs/1908.05825},
year = {2019},
url = {http://arxiv.org/abs/1908.05825},
eprinttype = {arXiv},
eprint = {1908.05825},
timestamp = {Mon, 26 Aug 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1908-05825.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1911-10506,
author = {Riddhish Bhalodia and
Iain Lee and
Shireen Y. Elhabian},
title = {dpVAEs: Fixing Sample Generation for Regularized VAEs},
journal = {CoRR},
volume = {abs/1911.10506},
year = {2019},
url = {http://arxiv.org/abs/1911.10506},
eprinttype = {arXiv},
eprint = {1911.10506},
timestamp = {Tue, 03 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-1911-10506.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tmi/TuSVEWHPPYWP18,
author = {Liyun Tu and
Martin Styner and
Jared Vicory and
Shireen Y. Elhabian and
Rui Wang and
Jun{-}Pyo Hong and
Beatriz Paniagua and
Juan{-}Carlos Prieto and
Dan Yang and
Ross T. Whitaker and
Stephen M. Pizer},
title = {Skeletal Shape Correspondence Through Entropy},
journal = {{IEEE} Trans. Medical Imaging},
volume = {37},
number = {1},
pages = {1--11},
year = {2018},
url = {https://doi.org/10.1109/TMI.2017.2755550},
doi = {10.1109/TMI.2017.2755550},
timestamp = {Thu, 06 Jun 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tmi/TuSVEWHPPYWP18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cinc/BhalodiaGSWMKMC18,
author = {Riddhish Bhalodia and
Anupama Goparaju and
Tim Sodergren and
Ross T. Whitaker and
Alan Morris and
Evgueni Kholmovski and
Nassir Marrouche and
Joshua Cates and
Shireen Y. Elhabian},
title = {Deep Learning for End-to-End Atrial Fibrillation Recurrence Estimation},
booktitle = {Computing in Cardiology, CinC 2018, Maastricht, The Netherlands, September
23-26, 2018},
pages = {1--4},
publisher = {www.cinc.org},
year = {2018},
url = {http://www.cinc.org/archives/2018/pdf/CinC2018-160.pdf},
doi = {10.22489/CINC.2018.160},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cinc/BhalodiaGSWMKMC18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cinc/SodergrenGMKMCE18,
author = {Tim Sodergren and
Anupama Goparaju and
Alan Morris and
Evgueni Kholmovski and
Nassir Marrouche and
Joshua Cates and
Shireen Y. Elhabian},
title = {Interactive Exploration of Left Atrium Population-Level Morphology
in Atrial Fibrillation Patients},
booktitle = {Computing in Cardiology, CinC 2018, Maastricht, The Netherlands, September
23-26, 2018},
pages = {1--3},
publisher = {www.cinc.org},
year = {2018},
url = {http://www.cinc.org/archives/2018/pdf/CinC2018-377.pdf},
doi = {10.22489/CINC.2018.377},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cinc/SodergrenGMKMCE18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/GoparajuCMKMWE18,
author = {Anupama Goparaju and
Ibolya Csecs and
Alan Morris and
Evgueni Kholmovski and
Nassir Marrouche and
Ross T. Whitaker and
Shireen Y. Elhabian},
editor = {Martin Reuter and
Christian Wachinger and
Herv{\'{e}} Lombaert and
Beatriz Paniagua and
Marcel L{\"{u}}thi and
Bernhard Egger},
title = {On the Evaluation and Validation of Off-the-Shelf Statistical Shape
Modeling Tools: {A} Clinical Application},
booktitle = {Shape in Medical Imaging - International Workshop, ShapeMI 2018, Held
in Conjunction with {MICCAI} 2018, Granada, Spain, September 20, 2018,
Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11167},
pages = {14--27},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-030-04747-4\_2},
doi = {10.1007/978-3-030-04747-4\_2},
timestamp = {Sun, 25 Oct 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miccai/GoparajuCMKMWE18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/BhalodiaEKW18,
author = {Riddhish Bhalodia and
Shireen Y. Elhabian and
Ladislav Kavan and
Ross T. Whitaker},
editor = {Martin Reuter and
Christian Wachinger and
Herv{\'{e}} Lombaert and
Beatriz Paniagua and
Marcel L{\"{u}}thi and
Bernhard Egger},
title = {DeepSSM: {A} Deep Learning Framework for Statistical Shape Modeling
from Raw Images},
booktitle = {Shape in Medical Imaging - International Workshop, ShapeMI 2018, Held
in Conjunction with {MICCAI} 2018, Granada, Spain, September 20, 2018,
Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11167},
pages = {244--257},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-030-04747-4\_23},
doi = {10.1007/978-3-030-04747-4\_23},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miccai/BhalodiaEKW18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/SodergrenBWCME18,
author = {Tim Sodergren and
Riddhish Bhalodia and
Ross T. Whitaker and
Joshua Cates and
Nassir Marrouche and
Shireen Y. Elhabian},
editor = {Mihaela Pop and
Maxime Sermesant and
Jichao Zhao and
Shuo Li and
Kristin McLeod and
Alistair A. Young and
Kawal S. Rhode and
Tommaso Mansi},
title = {Mixture Modeling of Global Shape Priors and Autoencoding Local Intensity
Priors for Left Atrium Segmentation},
booktitle = {Statistical Atlases and Computational Models of the Heart. Atrial
Segmentation and {LV} Quantification Challenges - 9th International
Workshop, {STACOM} 2018, Held in Conjunction with {MICCAI} 2018, Granada,
Spain, September 16, 2018, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {11395},
pages = {357--367},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-030-12029-0\_39},
doi = {10.1007/978-3-030-12029-0\_39},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miccai/SodergrenBWCME18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1805-02285,
author = {Yen{-}Yun Yu and
Shireen Y. Elhabian and
Ross T. Whitaker},
title = {Clustering With Pairwise Relationships: {A} Generative Approach},
journal = {CoRR},
volume = {abs/1805.02285},
year = {2018},
url = {http://arxiv.org/abs/1805.02285},
eprinttype = {arXiv},
eprint = {1805.02285},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1805-02285.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1810-00111,
author = {Riddhish Bhalodia and
Shireen Y. Elhabian and
Ladislav Kavan and
Ross T. Whitaker},
title = {DeepSSM: {A} Deep Learning Framework for Statistical Shape Modeling
from Raw Images},
journal = {CoRR},
volume = {abs/1810.00111},
year = {2018},
url = {http://arxiv.org/abs/1810.00111},
eprinttype = {arXiv},
eprint = {1810.00111},
timestamp = {Tue, 30 Oct 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-1810-00111.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1810-00475,
author = {Riddhish Bhalodia and
Anupama Goparaju and
Tim Sodergren and
Alan Morris and
Evgueni Kholmovski and
Nassir Marrouche and
Joshua Cates and
Ross T. Whitaker and
Shireen Y. Elhabian},
title = {Deep Learning for End-to-End Atrial Fibrillation Recurrence Estimation},
journal = {CoRR},
volume = {abs/1810.00475},
year = {2018},
url = {http://arxiv.org/abs/1810.00475},
eprinttype = {arXiv},
eprint = {1810.00475},
timestamp = {Tue, 30 Oct 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-1810-00475.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1810-03987,
author = {Anupama Goparaju and
Ibolya Csecs and
Alan Morris and
Evgueni Kholmovski and
Nassir Marrouche and
Ross T. Whitaker and
Shireen Y. Elhabian},
title = {On the Evaluation and Validation of Off-the-shelf Statistical Shape
Modeling Tools: {A} Clinical Application},
journal = {CoRR},
volume = {abs/1810.03987},
year = {2018},
url = {http://arxiv.org/abs/1810.03987},
eprinttype = {arXiv},
eprint = {1810.03987},
timestamp = {Tue, 30 Oct 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-1810-03987.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/mia/VeniEW17,
author = {Gopalkrishna Veni and
Shireen Y. Elhabian and
Ross T. Whitaker},
title = {ShapeCut: Bayesian surface estimation using shape-driven graph},
journal = {Medical Image Anal.},
volume = {40},
pages = {11--29},
year = {2017},
url = {https://doi.org/10.1016/j.media.2017.04.005},
doi = {10.1016/J.MEDIA.2017.04.005},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/mia/VeniEW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cvpr/ElhabianW17,
author = {Shireen Y. Elhabian and
Ross T. Whitaker},
title = {ShapeOdds: Variational Bayesian Learning of Generative Shape Models},
booktitle = {2017 {IEEE} Conference on Computer Vision and Pattern Recognition,
{CVPR} 2017, Honolulu, HI, USA, July 21-26, 2017},
pages = {2185--2196},
publisher = {{IEEE} Computer Society},
year = {2017},
url = {https://doi.org/10.1109/CVPR.2017.235},
doi = {10.1109/CVPR.2017.235},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cvpr/ElhabianW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipmi/ElhabianW17,
author = {Shireen Y. Elhabian and
Ross T. Whitaker},
editor = {Marc Niethammer and
Martin Styner and
Stephen R. Aylward and
Hongtu Zhu and
Ipek Oguz and
Pew{-}Thian Yap and
Dinggang Shen},
title = {From Label Maps to Generative Shape Models: {A} Variational Bayesian
Learning Approach},
booktitle = {Information Processing in Medical Imaging - 25th International Conference,
{IPMI} 2017, Boone, NC, USA, June 25-30, 2017, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10265},
pages = {93--105},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-59050-9\_8},
doi = {10.1007/978-3-319-59050-9\_8},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ipmi/ElhabianW17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/AgrawalWE17,
author = {Praful Agrawal and
Ross T. Whitaker and
Shireen Y. Elhabian},
editor = {Maxime Descoteaux and
Lena Maier{-}Hein and
Alfred M. Franz and
Pierre Jannin and
D. Louis Collins and
Simon Duchesne},
title = {Learning Deep Features for Automated Placement of Correspondence Points
on Ensembles of Complex Shapes},
booktitle = {Medical Image Computing and Computer Assisted Intervention - {MICCAI}
2017 - 20th International Conference, Quebec City, QC, Canada, September
11-13, 2017, Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {10433},
pages = {185--193},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-66182-7\_22},
doi = {10.1007/978-3-319-66182-7\_22},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miccai/AgrawalWE17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cviu/TuVEPPDWSP16,
author = {Liyun Tu and
Jared Vicory and
Shireen Y. Elhabian and
Beatriz Paniagua and
Juan{-}Carlos Prieto and
James N. Damon and
Ross T. Whitaker and
Martin Styner and
Stephen M. Pizer},
title = {Entropy-based correspondence improvement of interpolated skeletal
models},
journal = {Comput. Vis. Image Underst.},
volume = {151},
pages = {72--79},
year = {2016},
url = {https://doi.org/10.1016/j.cviu.2015.11.002},
doi = {10.1016/J.CVIU.2015.11.002},
timestamp = {Thu, 06 Jun 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cviu/TuVEPPDWSP16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/ElhabianAW16,
author = {Shireen Y. Elhabian and
Praful Agrawal and
Ross T. Whitaker},
title = {Optimal parameter map estimation for shape representation: {A} generative
approach},
booktitle = {13th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
2016, Prague, Czech Republic, April 13-16, 2016},
pages = {660--663},
publisher = {{IEEE}},
year = {2016},
url = {https://doi.org/10.1109/ISBI.2016.7493353},
doi = {10.1109/ISBI.2016.7493353},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbi/ElhabianAW16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/ElhabianVPSG16,
author = {Shireen Y. Elhabian and
Clement Vachet and
Joseph Piven and
Martin Styner and
Guido Gerig},
title = {Compressive sensing based Q-space resampling for handling fast bulk
motion in hardi acquisitions},
booktitle = {13th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
2016, Prague, Czech Republic, April 13-16, 2016},
pages = {907--910},
publisher = {{IEEE}},
year = {2016},
url = {https://doi.org/10.1109/ISBI.2016.7493412},
doi = {10.1109/ISBI.2016.7493412},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isbi/ElhabianVPSG16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/SultanaAEWRBCA16,
author = {Sharmin Sultana and
Praful Agrawal and
Shireen Y. Elhabian and
Ross T. Whitaker and
Tanweer Rashid and
Jason E. Blatt and
Justin S. Cetas and
Michel A. Audette},
editor = {Raj Shekhar and
Stefan Wesarg and
Miguel {\'{A}}ngel Gonz{\'{a}}lez Ballester and
Klaus Drechsler and
Yoshinobu Sato and
Marius Erdt and
Marius George Linguraru and
Cristina Oyarzun Laura},
title = {Towards a Statistical Shape-Aware Deformable Contour Model for Cranial
Nerve Identification},
booktitle = {Clinical Image-Based Procedures. Translational Research in Medical
Imaging - 5th International Workshop, {CLIP} 2016, Held in Conjunction
with {MICCAI} 2016, Athens, Greece, October 17, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9958},
pages = {68--76},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-46472-5\_9},
doi = {10.1007/978-3-319-46472-5\_9},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miccai/SultanaAEWRBCA16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/informaticaLT/ElhabianF16,
author = {Shireen Y. Elhabian and
Aly A. Farag},
title = {Helmholtz HSH-Based Basis: {A} Compact Phenomenological Representation
of Arbitrary Reflectance},
journal = {Informatica},
volume = {26},
number = {4},
pages = {593--620},
year = {2015},
url = {http://content.iospress.com/articles/informatica/inf1080},
timestamp = {Tue, 26 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/informaticaLT/ElhabianF16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/VeniEW15,
author = {Gopalkrishna Veni and
Shireen Y. Elhabian and
Ross T. Whitaker},
title = {A Bayesian formulation of graph-cut surface estimation with global
shape priors},
booktitle = {12th {IEEE} International Symposium on Biomedical Imaging, {ISBI}
2015, Brooklyn, NY, USA, April 16-19, 2015},
pages = {368--371},
publisher = {{IEEE}},
year = {2015},
url = {https://doi.org/10.1109/ISBI.2015.7163889},
doi = {10.1109/ISBI.2015.7163889},
timestamp = {Wed, 04 Oct 2023 17:01:25 +0200},
biburl = {https://dblp.org/rec/conf/isbi/VeniEW15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/iet-cvi/AbdelrahimFEE14,
author = {Aly S. Abdelrahim and
Aly A. Farag and
Shireen Y. Elhabian and
Moumen T. El{-}Melegy},
title = {Shape-from-shading using sensor and physical object characteristics
applied to human teeth surface reconstruction},
journal = {{IET} Comput. Vis.},
volume = {8},
number = {1},
pages = {1--15},
year = {2014},
url = {https://doi.org/10.1049/iet-cvi.2013.0068},
doi = {10.1049/IET-CVI.2013.0068},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/iet-cvi/AbdelrahimFEE14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/iet-cvi/ElhabianF14,
author = {Shireen Y. Elhabian and
Aly A. Farag},
title = {Image irradiance harmonics: a phenomenological model of image irradiance
of arbitrary surface reflectance},
journal = {{IET} Comput. Vis.},
volume = {8},
number = {5},
pages = {365--381},
year = {2014},
url = {https://doi.org/10.1049/iet-cvi.2013.0116},
doi = {10.1049/IET-CVI.2013.0116},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/iet-cvi/ElhabianF14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/iet-cvi/ElhabianF14a,
author = {Shireen Y. Elhabian and
Aly A. Farag},
title = {Appearance-based approach for complete human jaw shape reconstruction},
journal = {{IET} Comput. Vis.},
volume = {8},
number = {5},
pages = {404--418},
year = {2014},
url = {https://doi.org/10.1049/iet-cvi.2013.0107},
doi = {10.1049/IET-CVI.2013.0107},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/iet-cvi/ElhabianF14a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icip/MostafaEAEF14,
author = {Eslam A. Mostafa and
Shireen Y. Elhabian and
Aly S. Abdelrahim and
Salwa Elshazly and
Aly A. Farag},
title = {Statistical morphable model for human teeth restoration},
booktitle = {2014 {IEEE} International Conference on Image Processing, {ICIP} 2014,
Paris, France, October 27-30, 2014},
pages = {4285--4288},
publisher = {{IEEE}},
year = {2014},
url = {https://doi.org/10.1109/ICIP.2014.7025870},
doi = {10.1109/ICIP.2014.7025870},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icip/MostafaEAEF14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/ElhabianGVPSLPG14,
author = {Shireen Y. Elhabian and
Yaniv Gur and
Clement Vachet and
Joseph Piven and
Martin Styner and
Ilana Leppert and
G. Bruce Pike and
Guido Gerig},
title = {A preliminary study on the effect of motion correction on {HARDI}
reconstruction},
booktitle = {{IEEE} 11th International Symposium on Biomedical Imaging, {ISBI}
2014, April 29 - May 2, 2014, Beijing, Chin, Beijing, China},
pages = {1055--1058},
publisher = {{IEEE}},
year = {2014},
url = {https://doi.org/10.1109/ISBI.2014.6868055},
doi = {10.1109/ISBI.2014.6868055},
timestamp = {Wed, 04 Oct 2023 17:01:25 +0200},
biburl = {https://dblp.org/rec/conf/isbi/ElhabianGVPSLPG14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/iet-cvi/ElhabianF13,
author = {Shireen Y. Elhabian and
Aly A. Farag},
title = {Towards efficient image irradiance modelling of convex Lambertian
surfaces under single viewpoint and frontal illumination},
journal = {{IET} Comput. Vis.},
volume = {7},
number = {6},
pages = {478--487},
year = {2013},
url = {https://doi.org/10.1049/iet-cvi.2012.0154},
doi = {10.1049/IET-CVI.2012.0154},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/iet-cvi/ElhabianF13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cvpr/ElhabianF13,
author = {Shireen Y. Elhabian and
Aly A. Farag},
title = {Analytic Bilinear Appearance Subspace Construction for Modeling Image
Irradiance under Natural Illumination and Non-Lambertian Reflectance},
booktitle = {2013 {IEEE} Conference on Computer Vision and Pattern Recognition,
Portland, OR, USA, June 23-28, 2013},
pages = {1446--1451},
publisher = {{IEEE} Computer Society},
year = {2013},
url = {https://doi.org/10.1109/CVPR.2013.190},
doi = {10.1109/CVPR.2013.190},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cvpr/ElhabianF13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icip/AbdelrahimSEGF13,
author = {Aly S. Abdelrahim and
Ahmed Shalaby and
Shireen Y. Elhabian and
James H. Graham and
Aly A. Farag},
title = {A 3D reconstruction of the human jaw from a single image},
booktitle = {{IEEE} International Conference on Image Processing, {ICIP} 2013,
Melbourne, Australia, September 15-18, 2013},
pages = {3622--3626},
publisher = {{IEEE}},
year = {2013},
url = {https://doi.org/10.1109/ICIP.2013.6738747},
doi = {10.1109/ICIP.2013.6738747},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icip/AbdelrahimSEGF13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isbi/ElhabianAFTAF13,
author = {Shireen Y. Elhabian and
Aly S. Abdelrahim and
Amal A. Farag and
David Tasman and
Wael Aboelmaaty and
Allan G. Farman},
title = {Clinical crowns shape reconstruction - An image-based approach},
booktitle = {10th {IEEE} International Symposium on Biomedical Imaging: From Nano
to Macro, {ISBI} 2013, 7-11 April, 2013, San Francisco, CA, USA, Proceedings},
pages = {93--96},
publisher = {{IEEE}},
year = {2013},
url = {https://doi.org/10.1109/ISBI.2013.6556420},
doi = {10.1109/ISBI.2013.6556420},
timestamp = {Wed, 04 Oct 2023 17:01:25 +0200},
biburl = {https://dblp.org/rec/conf/isbi/ElhabianAFTAF13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/crv/ElhabianMRF12,
author = {Shireen Y. Elhabian and
Eslam A. Mostafa and
Ham M. Rara and
Aly A. Farag},
title = {Non-Lambertian Model-based Facial Shape Recovery from Single Image
Under Unknown General Illumination},
booktitle = {Ninth Conference on Computer and Robot Vision, {CRV} 2012, Toronto,
Ontario, Canada, May 28-30, 2012},
pages = {252--259},
publisher = {{IEEE} Computer Society},
year = {2012},
url = {https://doi.org/10.1109/CRV.2012.40},
doi = {10.1109/CRV.2012.40},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/crv/ElhabianMRF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cvpr/AbdelrahmanAERF12,
author = {Mostafa Abdelrahman and
Asem M. Ali and
Shireen Y. Elhabian and
Ham M. Rara and
Aly A. Farag},
title = {A passive stereo system for 3D human face reconstruction and recognition
at a distance},
booktitle = {2012 {IEEE} Computer Society Conference on Computer Vision and Pattern
Recognition Workshops, Providence, RI, USA, June 16-21, 2012},
pages = {17--22},
publisher = {{IEEE} Computer Society},
year = {2012},
url = {https://doi.org/10.1109/CVPRW.2012.6239210},
doi = {10.1109/CVPRW.2012.6239210},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cvpr/AbdelrahmanAERF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cvpr/IsmailEFDS12,
author = {Marwa Ismail and
Shireen Y. Elhabian and
Aly A. Farag and
Gerald W. Dryden and
Albert Seow},
title = {Fully automated 3D colon segmentation for early detection of colorectal
cancer based on convex formulation of the active contour model},
booktitle = {2012 {IEEE} Computer Society Conference on Computer Vision and Pattern
Recognition Workshops, Providence, RI, USA, June 16-21, 2012},
pages = {58--63},
publisher = {{IEEE} Computer Society},
year = {2012},
url = {https://doi.org/10.1109/CVPRW.2012.6239248},
doi = {10.1109/CVPRW.2012.6239248},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cvpr/IsmailEFDS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icip/AbdelrahimFEMA12,
author = {Aly S. Abdelrahim and
Aly A. Farag and
Shireen Y. Elhabian and
Eslam A. Mostafa and
Wael Aboelmaaty},
title = {Occlusal surface reconstruction of human teeth from a single image
based on object and sensor physical characteristics},
booktitle = {19th {IEEE} International Conference on Image Processing, {ICIP} 2012,
Lake Buena Vista, Orlando, FL, USA, September 30 - October 3, 2012},
pages = {1793--1796},
publisher = {{IEEE}},
year = {2012},
url = {https://doi.org/10.1109/ICIP.2012.6467229},
doi = {10.1109/ICIP.2012.6467229},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icip/AbdelrahimFEMA12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icip/ElhabianF12,
author = {Shireen Y. Elhabian and
Aly A. Farag},
title = {Modeling image irradiance under natural illumination and isotropic
surface reflectance},
booktitle = {19th {IEEE} International Conference on Image Processing, {ICIP} 2012,
Lake Buena Vista, Orlando, FL, USA, September 30 - October 3, 2012},
pages = {3013--3016},
publisher = {{IEEE}},
year = {2012},
url = {https://doi.org/10.1109/ICIP.2012.6467534},
doi = {10.1109/ICIP.2012.6467534},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icip/ElhabianF12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/FaragEAAFT12,
author = {Aly A. Farag and
Shireen Y. Elhabian and
Aly S. Abdelrehim and
Wael Aboelmaaty and
Allan G. Farman and
David Tasman},
editor = {Bjoern H. Menze and
Georg Langs and
Le Lu and
Albert Montillo and
Zhuowen Tu and
Antonio Criminisi},
title = {Model-Based Human Teeth Shape Recovery from a Single Optical Image
with Unknown Illumination},
booktitle = {Medical Computer Vision. Recognition Techniques and Applications in
Medical Imaging - Second International {MICCAI} Workshop, {MCV} 2012,
Nice, France, October 5, 2012, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {7766},
pages = {263--272},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-36620-8\_26},
doi = {10.1007/978-3-642-36620-8\_26},
timestamp = {Sun, 02 Oct 2022 16:11:47 +0200},
biburl = {https://dblp.org/rec/conf/miccai/FaragEAAFT12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bmvc/ElhabianRF11,
author = {Shireen Y. Elhabian and
Ham M. Rara and
Aly A. Farag},
editor = {Jesse Hoey and
Stephen J. McKenna and
Emanuele Trucco},
title = {Towards Efficient and Compact Phenomenological Representation of Arbitrary
Bidirectional Surface Reflectance},
booktitle = {British Machine Vision Conference, {BMVC} 2011, Dundee, UK, August
29 - September 2, 2011. Proceedings},
pages = {1--11},
publisher = {{BMVA} Press},
year = {2011},
url = {https://doi.org/10.5244/C.25.89},
doi = {10.5244/C.25.89},
timestamp = {Wed, 03 Feb 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/bmvc/ElhabianRF11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/crv/ElhabianRF11,
author = {Shireen Y. Elhabian and
Ham M. Rara and
Aly A. Farag},
title = {Modeling Lambertian Surfaces Under Unknown Distant Illumination Using
Hemispherical Harmonics},
booktitle = {Canadian Conference on Computer and Robot Vision, {CRV} 2011, St Johns,
Newfoundland, Canada, May 25-27, 2011},
pages = {293--300},
publisher = {{IEEE} Computer Society},
year = {2011},
url = {https://doi.org/10.1109/CRV.2011.46},
doi = {10.1109/CRV.2011.46},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/crv/ElhabianRF11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/crv/ElhabianRAF11,
author = {Shireen Y. Elhabian and
Ham M. Rara and
Asem M. Ali and
Aly A. Farag},
title = {Illumination-invariant Statistical Shape Recovery with Contiguous
Occlusion},
booktitle = {Canadian Conference on Computer and Robot Vision, {CRV} 2011, St Johns,
Newfoundland, Canada, May 25-27, 2011},
pages = {301--308},
publisher = {{IEEE} Computer Society},
year = {2011},
url = {https://doi.org/10.1109/CRV.2011.47},
doi = {10.1109/CRV.2011.47},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/crv/ElhabianRAF11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccv/ElhabianRF11,
author = {Shireen Y. Elhabian and
Ham M. Rara and
Aly A. Farag},
editor = {Dimitris N. Metaxas and
Long Quan and
Alberto Sanfeliu and
Luc Van Gool},
title = {Towards accurate and efficient representation of image irradiance
of convex-Lambertian objects under unknown near lighting},
booktitle = {{IEEE} International Conference on Computer Vision, {ICCV} 2011, Barcelona,
Spain, November 6-13, 2011},
pages = {1732--1737},
publisher = {{IEEE} Computer Society},
year = {2011},
url = {https://doi.org/10.1109/ICCV.2011.6126437},
doi = {10.1109/ICCV.2011.6126437},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccv/ElhabianRF11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icip/ElhabianRF11,
author = {Shireen Y. Elhabian and
Ham M. Rara and
Aly A. Farag},
editor = {Beno{\^{\i}}t Macq and
Peter Schelkens},
title = {On the use of hemispherical harmonics for modeling images of objects
under unknown distant illumination},
booktitle = {18th {IEEE} International Conference on Image Processing, {ICIP} 2011,
Brussels, Belgium, September 11-14, 2011},
pages = {1109--1112},
publisher = {{IEEE}},
year = {2011},
url = {https://doi.org/10.1109/ICIP.2011.6115621},
doi = {10.1109/ICIP.2011.6115621},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icip/ElhabianRF11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isvc/AbdelrahmanAEF11,
author = {Mostafa Abdelrahman and
Asem M. Ali and
Shireen Y. Elhabian and
Aly A. Farag},
editor = {George Bebis and
Richard D. Boyle and
Bahram Parvin and
Darko Koracin and
Song Wang and
Kyungnam Kim and
Bedrich Benes and
Kenneth Moreland and
Christoph W. Borst and
Stephen DiVerdi and
Yi{-}Jen Chiang and
Jiang Ming},
title = {Solving Geometric Co-registration Problem of Multi-spectral Remote
Sensing Imagery Using SIFT-Based Features toward Precise Change Detection},
booktitle = {Advances in Visual Computing - 7th International Symposium, {ISVC}
2011, Las Vegas, NV, USA, September 26-28, 2011. Proceedings, Part
{II}},
series = {Lecture Notes in Computer Science},
volume = {6939},
pages = {607--616},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-24031-7\_61},
doi = {10.1007/978-3-642-24031-7\_61},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isvc/AbdelrahmanAEF11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/btas/RaraFEAMSD10,
author = {Ham M. Rara and
Aly A. Farag and
Shireen Y. Elhabian and
Asem M. Ali and
William Miller and
Thomas L. Starr and
Todd Davis},
title = {Face recognition at-a-distance using texture and sparse-stereo reconstruction},
booktitle = {Fourth {IEEE} International Conference on Biometrics: Theory Applications
and Systems, {BTAS} 2010, Washington, DC, USA, 27-29 September, 2010},
pages = {1--6},
publisher = {{IEEE}},
year = {2010},
url = {https://doi.org/10.1109/BTAS.2010.5634476},
doi = {10.1109/BTAS.2010.5634476},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/btas/RaraFEAMSD10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icip/RaraESF10,
author = {Ham M. Rara and
Shireen Y. Elhabian and
Thomas L. Starr and
Aly A. Farag},
title = {3D face recovery from intensities of general and unknown lighting
using Partial Least Squares},
booktitle = {Proceedings of the International Conference on Image Processing, {ICIP}
2010, September 26-29, Hong Kong, China},
pages = {4041--4044},
publisher = {{IEEE}},
year = {2010},
url = {https://doi.org/10.1109/ICIP.2010.5648990},
doi = {10.1109/ICIP.2010.5648990},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icip/RaraESF10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icpr/RaraAESF10,
author = {Ham M. Rara and
Asem M. Ali and
Shireen Y. Elhabian and
Thomas L. Starr and
Aly A. Farag},
title = {Face Recognition at-a-Distance Using Texture, Dense- and Sparse-Stereo
Reconstruction},
booktitle = {20th International Conference on Pattern Recognition, {ICPR} 2010,
Istanbul, Turkey, 23-26 August 2010},
pages = {1221--1224},
publisher = {{IEEE} Computer Society},
year = {2010},
url = {https://doi.org/10.1109/ICPR.2010.304},
doi = {10.1109/ICPR.2010.304},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/icpr/RaraAESF10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isvc/FaragEAGFCC10,
author = {Ahmed A. Farag and
Shireen Y. Elhabian and
Mostafa Abdelrahman and
James H. Graham and
Aly A. Farag and
Dongqing Chen and
Manuel Casanova},
editor = {George Bebis and
Richard D. Boyle and
Bahram Parvin and
Darko Koracin and
Ronald Chung and
Riad I. Hammoud and
Muhammad Hussain and
Kar{-}Han Tan and
Roger Crawfis and
Daniel Thalmann and
David L. Kao and
Lisa Avila},
title = {Surface Modeling of the Corpus Callosum from {MRI} Scans},
booktitle = {Advances in Visual Computing - 6th International Symposium, {ISVC}
2010, Las Vegas, NV, USA, November 29 - December 1, 2010, Proceedings,
Part {III}},
series = {Lecture Notes in Computer Science},
volume = {6455},
pages = {9--18},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-17277-9\_2},
doi = {10.1007/978-3-642-17277-9\_2},
timestamp = {Thu, 16 Mar 2023 20:00:32 +0100},
biburl = {https://dblp.org/rec/conf/isvc/FaragEAGFCC10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isvc/FaragAGEFF10,
author = {Amal A. Farag and
Asem M. Ali and
James H. Graham and
Shireen Y. Elhabian and
Aly A. Farag and
Robert Falk},
editor = {George Bebis and
Richard D. Boyle and
Bahram Parvin and
Darko Koracin and
Ronald Chung and
Riad I. Hammoud and
Muhammad Hussain and
Kar{-}Han Tan and
Roger Crawfis and
Daniel Thalmann and
David L. Kao and
Lisa Avila},
title = {Feature-Based Lung Nodule Classification},
booktitle = {Advances in Visual Computing - 6th International Symposium, {ISVC}
2010, Las Vegas, NV, USA, November 29 - December 1, 2010, Proceedings,
Part {III}},
series = {Lecture Notes in Computer Science},
volume = {6455},
pages = {79--88},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-17277-9\_9},
doi = {10.1007/978-3-642-17277-9\_9},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/isvc/FaragAGEFF10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/miccai/FaragEGFF10,
author = {Amal A. Farag and
Shireen Y. Elhabian and
James H. Graham and
Aly A. Farag and
Robert Falk},
editor = {Tianzi Jiang and
Nassir Navab and
Josien P. W. Pluim and
Max A. Viergever},
title = {Toward Precise Pulmonary Nodule Descriptors for Nodule Type Classification},
booktitle = {Medical Image Computing and Computer-Assisted Intervention - {MICCAI}
2010, 13th International Conference, Beijing, China, September 20-24,
2010, Proceedings, Part {III}},
series = {Lecture Notes in Computer Science},
volume = {6363},
pages = {626--633},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-15711-0\_78},
doi = {10.1007/978-3-642-15711-0\_78},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/miccai/FaragEGFF10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cvpr/RaraEAMSF09,
author = {Ham M. Rara and
Shireen Y. Elhabian and
Asem M. Ali and
Mike Miller and
Thomas L. Starr and
Aly A. Farag},
title = {Face recognition at-a-distance based on sparse-stereo reconstruction},
booktitle = {{IEEE} Conference on Computer Vision and Pattern Recognition, {CVPR}
Workshops 2009, Miami, FL, USA, 20-25 June, 2009},
pages = {27--32},
publisher = {{IEEE} Computer Society},
year = {2009},
url = {https://doi.org/10.1109/CVPRW.2009.5204301},
doi = {10.1109/CVPRW.2009.5204301},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cvpr/RaraEAMSF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icip/RaraESF09,
author = {Ham M. Rara and
Shireen Y. Elhabian and
Thomas L. Starr and
Aly A. Farag},
title = {Model-based shape recovery from single images of general and unknown
lighting},
booktitle = {Proceedings of the International Conference on Image Processing, {ICIP}
2009, 7-10 November 2009, Cairo, Egypt},
pages = {517--520},
publisher = {{IEEE}},
year = {2009},
url = {https://doi.org/10.1109/ICIP.2009.5413976},
doi = {10.1109/ICIP.2009.5413976},
timestamp = {Sat, 05 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icip/RaraESF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icip/RaraEAMSF09,
author = {Ham M. Rara and
Shireen Y. Elhabian and
Asem M. Ali and
Mike Miller and
Thomas L. Starr and
Aly A. Farag},
title = {Distant face recognition based on sparse-stereo reconstruction},
booktitle = {Proceedings of the International Conference on Image Processing, {ICIP}
2009, 7-10 November 2009, Cairo, Egypt},
pages = {4141--4144},
publisher = {{IEEE}},
year = {2009},
url = {https://doi.org/10.1109/ICIP.2009.5413467},
doi = {10.1109/ICIP.2009.5413467},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/icip/RaraEAMSF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isvc/RaraEAGMSF09,
author = {Ham M. Rara and
Shireen Y. Elhabian and
Asem M. Ali and
Travis R. Gault and
Mike Miller and
Thomas L. Starr and
Aly A. Farag},
editor = {George Bebis and
Richard D. Boyle and
Bahram Parvin and
Darko Koracin and
Yoshinori Kuno and
Junxian Wang and
Renato Pajarola and
Peter Lindstrom and
Andr{\'{e}} Hinkenjann and
L. Miguel Encarna{\c{c}}{\~{a}}o and
Cl{\'{a}}udio T. Silva and
Daniel S. Coming},
title = {A Framework for Long Distance Face Recognition Using Dense - and Sparse-Stereo
Reconstruction},
booktitle = {Advances in Visual Computing, 5th International Symposium, {ISVC}
2009, Las Vegas, NV, USA, November 30 - December 2, 2009, Proceedings,
Part {I}},
series = {Lecture Notes in Computer Science},
volume = {5875},
pages = {774--783},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-10331-5\_72},
doi = {10.1007/978-3-642-10331-5\_72},
timestamp = {Wed, 04 May 2022 07:33:36 +0200},
biburl = {https://dblp.org/rec/conf/isvc/RaraEAGMSF09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/isvc/FaragEAF08,
author = {Amal A. Farag and
Shireen Y. Elhabian and
Abdelrehim H. Ahmed and
Aly A. Farag},
editor = {George Bebis and
Richard D. Boyle and
Bahram Parvin and
Darko Koracin and
Paolo Remagnino and
Fatih Murat Porikli and
J{\"{o}}rg Peters and
James T. Klosowski and
Laura L. Arns and
Yu Ka Chun and
Theresa{-}Marie Rhyne and
Laura Monroe},
title = {Noise Analysis of a {SFS} Algorithm Formulated under Various Imaging
Conditions},
booktitle = {Advances in Visual Computing, 4th International Symposium, {ISVC}
2008, Las Vegas, NV, USA, December 1-3, 2008. Proceedings, Part {I}},
series = {Lecture Notes in Computer Science},
volume = {5358},
pages = {793--802},
publisher = {Springer},
year = {2008},
url = {https://doi.org/10.1007/978-3-540-89639-5\_76},
doi = {10.1007/978-3-540-89639-5\_76},
timestamp = {Fri, 21 May 2021 14:46:51 +0200},
biburl = {https://dblp.org/rec/conf/isvc/FaragEAF08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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