BibTeX records: Eivind Hovig

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@article{DBLP:journals/bioinformatics/HanesARNHZE23,
  author       = {Robert Hanes and
                  Pilar Ayuda{-}Dur{\'{a}}n and
                  Leiv R{\o}nneberg and
                  Sigve Nakken and
                  Eivind Hovig and
                  Manuela Zucknick and
                  Jorrit M. Enserink},
  title        = {screenwerk: a modular tool for the design and analysis of drug combination
                  screens},
  journal      = {Bioinform.},
  volume       = {39},
  number       = {1},
  year         = {2023},
  url          = {https://doi.org/10.1093/bioinformatics/btac840},
  doi          = {10.1093/BIOINFORMATICS/BTAC840},
  timestamp    = {Fri, 22 Mar 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/HanesARNHZE23.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/FrommHDZAOUCKAT22,
  author       = {Bastian Fromm and
                  Eirik H{\o}ye and
                  Diana Domanska and
                  Xiangfu Zhong and
                  Ernesto Aparicio{-}Puerta and
                  Vladimir Ovchinnikov and
                  Sinan U. Umu and
                  Peter J. Chabot and
                  Wenjing Kang and
                  Morteza Aslanzadeh and
                  Marcel Tarbier and
                  Emilio M{\'{a}}rmol{-}S{\'{a}}nchez and
                  Gianvito Urgese and
                  Morten Johansen and
                  Eivind Hovig and
                  Michael Hackenberg and
                  Marc R. Friedl{\"{a}}nder and
                  Kevin J. Peterson},
  title        = {MirGeneDB 2.1: toward a complete sampling of all major animal phyla},
  journal      = {Nucleic Acids Res.},
  volume       = {50},
  number       = {{D1}},
  pages        = {204--210},
  year         = {2022},
  url          = {https://doi.org/10.1093/nar/gkab1101},
  doi          = {10.1093/NAR/GKAB1101},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/FrommHDZAOUCKAT22.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/natmi/PavlovicSMKKVWB21,
  author       = {Milena Pavlovic and
                  Lonneke Scheffer and
                  Keshav Motwani and
                  Chakravarthi Kanduri and
                  Radmila Kompova and
                  Nikolay Vazov and
                  Knut Waagan and
                  Fabian L. M. Bernal and
                  Alexandre Almeida Costa and
                  Brian Corrie and
                  Rahmad Akbar and
                  Ghadi S. Al Hajj and
                  Gabriel Balaban and
                  Todd M. Brusko and
                  Maria Chernigovskaya and
                  Scott Christley and
                  Lindsay G. Cowell and
                  Robert Frank and
                  Ivar Grytten and
                  Sveinung Gundersen and
                  Ingrid Hob{\ae}k Haff and
                  Eivind Hovig and
                  Ping{-}Han Hsieh and
                  G{\"{u}}nter Klambauer and
                  Marieke L. Kuijjer and
                  Christin Lund{-}Andersen and
                  Antonio Martini and
                  Thomas Minotto and
                  Johan Pensar and
                  Knut D. Rand and
                  Enrico Riccardi and
                  Philippe A. Robert and
                  Artur Rocha and
                  Andrei Slabodkin and
                  Igor Snapkov and
                  Ludvig M. Sollid and
                  Dmytro Titov and
                  C{\'{e}}dric R. Weber and
                  Michael Widrich and
                  Gur Yaari and
                  Victor Greiff and
                  Geir Kjetil Sandve},
  title        = {The immuneML ecosystem for machine learning analysis of adaptive immune
                  receptor repertoires},
  journal      = {Nat. Mach. Intell.},
  volume       = {3},
  number       = {11},
  pages        = {936--944},
  year         = {2021},
  url          = {https://doi.org/10.1038/s42256-021-00413-z},
  doi          = {10.1038/S42256-021-00413-Z},
  timestamp    = {Sat, 30 Sep 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/natmi/PavlovicSMKKVWB21.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/FrommDHOKAJFMHH20,
  author       = {Bastian Fromm and
                  Diana Domanska and
                  Eirik H{\o}ye and
                  Vladimir Ovchinnikov and
                  Wenjing Kang and
                  Ernesto Aparicio{-}Puerta and
                  Morten Johansen and
                  Kjersti Flatmark and
                  Anthony Mathelier and
                  Eivind Hovig and
                  Michael Hackenberg and
                  Marc R. Friedl{\"{a}}nder and
                  Kevin J. Peterson},
  title        = {MirGeneDB 2.0: the metazoan microRNA complement},
  journal      = {Nucleic Acids Res.},
  volume       = {48},
  number       = {Database-Issue},
  pages        = {D132--D141},
  year         = {2020},
  url          = {https://doi.org/10.1093/nar/gkz885},
  doi          = {10.1093/NAR/GKZ885},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/FrommDHOKAJFMHH20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/f1000research/SalgadoABBCCADFGCGGGHHHHJ20,
  author       = {David Salgado and
                  Irina M. Armean and
                  Michael Baudis and
                  Sergi Beltran and
                  Salvador Capella{-}Guti{\'{e}}rrez and
                  Denise Carvalho{-}Silva and
                  Victoria Dominguez Del Angel and
                  Joaqu{\'{\i}}n Dopazo and
                  Laura I. Furlong and
                  Bo Gao and
                  Leyla Jael Garc{\'{\i}}a Castro and
                  Dietlind Gerloff and
                  Ivo Gut and
                  Attila Gyenesei and
                  Nina Habermann and
                  John M. Hancock and
                  Marc Hanauer and
                  Eivind Hovig and
                  Lennart F. Johansson and
                  Thomas Keane and
                  Jan Korbel and
                  Katharina B. Lauer and
                  Steve Laurie and
                  Brane Leskosek and
                  David Lloyd and
                  Tom{\`{a}}s Marqu{\`{e}}s{-}Bonet and
                  Hailiang Mei and
                  Katalin Monostory and
                  Janet Pi{\~{n}}ero and
                  Krzysztof Poterlowicz and
                  Ana Rath and
                  Pubudu Samarakoon and
                  Ferran Sanz and
                  Gary Saunders and
                  Daoud Sie and
                  Morris A. Swertz and
                  Kirill Tsukanov and
                  Alfonso Valencia and
                  Marko Vidak and
                  Cristina Yenyxe Gonz{\'{a}}lez and
                  Bauke Ylstra and
                  Christophe B{\'{e}}roud},
  title        = {The {ELIXIR} Human Copy Number Variations Community: building bioinformatics
                  infrastructure for research},
  journal      = {F1000Research},
  volume       = {9},
  pages        = {1229},
  year         = {2020},
  url          = {https://doi.org/10.12688/f1000research.24887.1},
  doi          = {10.12688/F1000RESEARCH.24887.1},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/f1000research/SalgadoABBCCADFGCGGGHHHHJ20.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/KanduriBGHS19,
  author       = {Chakravarthi Kanduri and
                  Christoph Bock and
                  Sveinung Gundersen and
                  Eivind Hovig and
                  Geir Kjetil Sandve},
  title        = {Colocalization analyses of genomic elements: approaches, recommendations
                  and challenges},
  journal      = {Bioinform.},
  volume       = {35},
  number       = {9},
  pages        = {1615--1624},
  year         = {2019},
  url          = {https://doi.org/10.1093/bioinformatics/bty835},
  doi          = {10.1093/BIOINFORMATICS/BTY835},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/KanduriBGHS19.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/NakkenFVAMH18,
  author       = {Sigve Nakken and
                  Ghislain Fournous and
                  Daniel Vod{\'{a}}k and
                  Lars Birger Aasheim and
                  Ola Myklebost and
                  Eivind Hovig},
  title        = {Personal Cancer Genome Reporter: variant interpretation report for
                  precision oncology},
  journal      = {Bioinform.},
  volume       = {34},
  number       = {10},
  pages        = {1778--1780},
  year         = {2018},
  url          = {https://doi.org/10.1093/bioinformatics/btx817},
  doi          = {10.1093/BIOINFORMATICS/BTX817},
  timestamp    = {Fri, 09 Apr 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/NakkenFVAMH18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/bigdataconf/AzabMHP18,
  author       = {Abdulrahman Azab and
                  Hein Meling and
                  Eivind Hovig and
                  Antti Pursula},
  editor       = {Naoki Abe and
                  Huan Liu and
                  Calton Pu and
                  Xiaohua Hu and
                  Nesreen K. Ahmed and
                  Mu Qiao and
                  Yang Song and
                  Donald Kossmann and
                  Bing Liu and
                  Kisung Lee and
                  Jiliang Tang and
                  Jingrui He and
                  Jeffrey S. Saltz},
  title        = {Filesystem Front-end for Seamless Job Management in Sensitive Data
                  e-Infrastructures and Cloud Federation},
  booktitle    = {{IEEE} International Conference on Big Data {(IEEE} BigData 2018),
                  Seattle, WA, USA, December 10-13, 2018},
  pages        = {5126--5131},
  publisher    = {{IEEE}},
  year         = {2018},
  url          = {https://doi.org/10.1109/BigData.2018.8622144},
  doi          = {10.1109/BIGDATA.2018.8622144},
  timestamp    = {Fri, 19 Nov 2021 16:08:20 +0100},
  biburl       = {https://dblp.org/rec/conf/bigdataconf/AzabMHP18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1807-06808,
  author       = {Cl{\'{e}}ment Levin and
                  Emeric Dynomant and
                  Bruno J. Gonzalez and
                  Laurent Mouchard and
                  David Landsman and
                  Eivind Hovig and
                  Kristian Vlahovicek},
  title        = {A data-supported history of bioinformatics tools},
  journal      = {CoRR},
  volume       = {abs/1807.06808},
  year         = {2018},
  url          = {http://arxiv.org/abs/1807.06808},
  eprinttype    = {arXiv},
  eprint       = {1807.06808},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/corr/abs-1807-06808.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/f1000research/TekleGKBRLZAMKRHSFAVHWDNP18,
  author       = {Kidane M. Tekle and
                  Sveinung Gundersen and
                  Kjetil Klepper and
                  Lars Ailo Bongo and
                  Inge Alexander Raknes and
                  Xiaxi Li and
                  Wei Zhang and
                  Christian Andreetta and
                  Teshome Dagne Mulugeta and
                  Mat{\'{u}}s Kalas and
                  Morten B. Rye and
                  Erik Hjerde and
                  Jeevan Karloss Antony Samy and
                  Ghislain Fornous and
                  Abdulrahman Azab and
                  Dag Inge V{\aa}ge and
                  Eivind Hovig and
                  Nils Peder Willassen and
                  Finn Drabl{\o}s and
                  St{\aa}le Nyg{\aa}rd and
                  Kjell Petersen and
                  Inge Jonassen},
  title        = {Norwegian e-Infrastructure for Life Sciences (NeLS)},
  journal      = {F1000Research},
  volume       = {7},
  pages        = {968},
  year         = {2018},
  url          = {https://doi.org/10.12688/f1000research.15119.1},
  doi          = {10.12688/F1000RESEARCH.15119.1},
  timestamp    = {Mon, 28 Aug 2023 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/f1000research/TekleGKBRLZAMKRHSFAVHWDNP18.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/DomanskaVLSHS17,
  author       = {Diana Domanska and
                  Daniel Vod{\'{a}}k and
                  Christin Lund{-}Andersen and
                  Stefania Salvatore and
                  Eivind Hovig and
                  Geir Kjetil Sandve},
  title        = {The rainfall plot: its motivation, characteristics and pitfalls},
  journal      = {{BMC} Bioinform.},
  volume       = {18},
  number       = {1},
  pages        = {264:1--264:11},
  year         = {2017},
  url          = {https://doi.org/10.1186/s12859-017-1679-8},
  doi          = {10.1186/S12859-017-1679-8},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/DomanskaVLSHS17.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/BornichGHPCS16,
  author       = {Claus B{\o}rnich and
                  Ivar Grytten and
                  Eivind Hovig and
                  Jonas Paulsen and
                  Martin Cech and
                  Geir Kjetil Sandve},
  title        = {Galaxy Portal: interacting with the galaxy platform through mobile
                  devices},
  journal      = {Bioinform.},
  volume       = {32},
  number       = {11},
  pages        = {1743--1745},
  year         = {2016},
  url          = {https://doi.org/10.1093/bioinformatics/btw042},
  doi          = {10.1093/BIOINFORMATICS/BTW042},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/BornichGHPCS16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/ClancyH16,
  author       = {Trevor Clancy and
                  Eivind Hovig},
  title        = {Profiling networks of distinct immune-cells in tumors},
  journal      = {{BMC} Bioinform.},
  volume       = {17},
  pages        = {263},
  year         = {2016},
  url          = {https://doi.org/10.1186/s12859-016-1141-3},
  doi          = {10.1186/S12859-016-1141-3},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/ClancyH16.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/PaulsenSGLTH14,
  author       = {Jonas Paulsen and
                  Geir Kjetil Sandve and
                  Sveinung Gundersen and
                  Tonje Lien and
                  Kai Trengereid and
                  Eivind Hovig},
  title        = {HiBrowse: multi-purpose statistical analysis of genome-wide chromatin
                  3D organization},
  journal      = {Bioinform.},
  volume       = {30},
  number       = {11},
  pages        = {1620--1622},
  year         = {2014},
  url          = {https://doi.org/10.1093/bioinformatics/btu082},
  doi          = {10.1093/BIOINFORMATICS/BTU082},
  timestamp    = {Mon, 26 Oct 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/PaulsenSGLTH14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/NygardRCNBSTCH14,
  author       = {St{\aa}le Nyg{\aa}rd and
                  Trond Reitan and
                  Trevor Clancy and
                  Vegard Nygaard and
                  Johannes Bj{\o}rnstad and
                  Biljana Skrbic and
                  Theis T{\o}nnessen and
                  Geir Christensen and
                  Eivind Hovig},
  title        = {Identifying pathogenic processes by integrating microarray data with
                  prior knowledge},
  journal      = {{BMC} Bioinform.},
  volume       = {15},
  pages        = {115},
  year         = {2014},
  url          = {https://doi.org/10.1186/1471-2105-15-115},
  doi          = {10.1186/1471-2105-15-115},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcbi/NygardRCNBSTCH14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/JamesWS14,
  author       = {Doug James and
                  Nancy Wilkins{-}Diehr and
                  Victoria Stodden and
                  Dirk Colbry and
                  Carlos Rosales and
                  Mark R. Fahey and
                  Justin Shi and
                  Rafael Ferreira da Silva and
                  Kyo Lee and
                  Ralph Roskies and
                  Laurence Loewe and
                  Susan Lindsey and
                  Rob Kooper and
                  Lorena A. Barba and
                  David H. Bailey and
                  Jonathan M. Borwein and
                  {\'{O}}scar Corcho and
                  Ewa Deelman and
                  Michael C. Dietze and
                  Benjamin Gilbert and
                  Jan Harkes and
                  Seth Keele and
                  Praveen Kumar and
                  Jong Lee and
                  Erika Linke and
                  Richard Marciano and
                  Luigi Marini and
                  Chris Mattmann and
                  Dave Mattson and
                  Kenton McHenry and
                  Robert T. McLay and
                  Sheila Miguez and
                  Barbara S. Minsker and
                  Mar{\'{\i}}a S. P{\'{e}}rez{-}Hern{\'{a}}ndez and
                  Dan Ryan and
                  Mats Rynge and
                  Idafen Santana{-}P{\'{e}}rez and
                  Mahadev Satyanarayanan and
                  Gloriana St. Clair and
                  Keith Webster and
                  Eivind Hovig and
                  Daniel S. Katz and
                  Sophie Kay and
                  Geir Kjetil Sandve and
                  David Skinner and
                  Gabrielle Allen and
                  John Cazes and
                  Kym Won Cho and
                  Jim Fonseca and
                  Lorraine J. Hwang and
                  Lars Koesterke and
                  Pragnesh Patel and
                  Line Pouchard and
                  Edward Seidel and
                  Isuru Suriarachchi},
  title        = {Standing Together for Reproducibility in Large-Scale Computing: Report
                  on reproducibility@XSEDE},
  journal      = {CoRR},
  volume       = {abs/1412.5557},
  year         = {2014},
  url          = {http://arxiv.org/abs/1412.5557},
  eprinttype    = {arXiv},
  eprint       = {1412.5557},
  timestamp    = {Wed, 11 Dec 2019 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/corr/JamesWS14.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SandveGJGGHHLNNPRTCDFKLRFH13,
  author       = {Geir Kjetil Sandve and
                  Sveinung Gundersen and
                  Morten Johansen and
                  Ingrid Kristine Glad and
                  Krishanthi Gunathasan and
                  Lars Holden and
                  Marit Holden and
                  Knut Liest{\o}l and
                  St{\aa}le Nyg{\aa}rd and
                  Vegard Nygaard and
                  Jonas Paulsen and
                  Halfdan Rydbeck and
                  Kai Trengereid and
                  Trevor Clancy and
                  Finn Drabl{\o}s and
                  Egil Ferkingstad and
                  Mat{\'{u}}s Kalas and
                  Tonje Lien and
                  Morten Rye and
                  Arnoldo Frigessi and
                  Eivind Hovig},
  title        = {The Genomic HyperBrowser: an analysis web server for genome-scale
                  data},
  journal      = {Nucleic Acids Res.},
  volume       = {41},
  number       = {Webserver-Issue},
  pages        = {133--141},
  year         = {2013},
  url          = {https://doi.org/10.1093/nar/gkt342},
  doi          = {10.1093/NAR/GKT342},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/SandveGJGGHHLNNPRTCDFKLRFH13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/neuroimage/MattingsdalBDSSMAHJA13,
  author       = {Morten Mattingsdal and
                  Andrew Anand Brown and
                  Srdjan Djurovic and
                  Ida Elken S{\o}nderby and
                  Andres Server and
                  Ingrid Melle and
                  Ingrid Agartz and
                  Eivind Hovig and
                  Jimmy Jensen and
                  Ole A. Andreassen},
  title        = {Pathway analysis of genetic markers associated with a functional {MRI}
                  faces paradigm implicates polymorphisms in calcium responsive pathways},
  journal      = {NeuroImage},
  volume       = {70},
  pages        = {143--149},
  year         = {2013},
  url          = {https://doi.org/10.1016/j.neuroimage.2012.12.035},
  doi          = {10.1016/J.NEUROIMAGE.2012.12.035},
  timestamp    = {Sat, 19 Oct 2019 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/neuroimage/MattingsdalBDSSMAHJA13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/SandveNTH13,
  author       = {Geir Kjetil Sandve and
                  Anton Nekrutenko and
                  James Taylor and
                  Eivind Hovig},
  title        = {Ten Simple Rules for Reproducible Computational Research},
  journal      = {PLoS Comput. Biol.},
  volume       = {9},
  number       = {10},
  year         = {2013},
  url          = {https://doi.org/10.1371/journal.pcbi.1003285},
  doi          = {10.1371/JOURNAL.PCBI.1003285},
  timestamp    = {Thu, 10 Sep 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/SandveNTH13.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ThingnesLGOH12,
  author       = {Josef Thingnes and
                  Timothy J. Lavelle and
                  Arne B. Gjuvsland and
                  Stig W. Omholt and
                  Eivind Hovig},
  title        = {Towards a quantitative understanding of the {MITF-PIAS3-STAT3} connection},
  journal      = {{BMC} Syst. Biol.},
  volume       = {6},
  pages        = {11},
  year         = {2012},
  url          = {https://doi.org/10.1186/1752-0509-6-11},
  doi          = {10.1186/1752-0509-6-11},
  timestamp    = {Tue, 05 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/ThingnesLGOH12.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/GundersenKAFHS11,
  author       = {Sveinung Gundersen and
                  Mat{\'{u}}s Kalas and
                  Osman Abul and
                  Arnoldo Frigessi and
                  Eivind Hovig and
                  Geir Kjetil Sandve},
  title        = {Identifying elemental genomic track types and representing them uniformly},
  journal      = {{BMC} Bioinform.},
  volume       = {12},
  pages        = {494},
  year         = {2011},
  url          = {https://doi.org/10.1186/1471-2105-12-494},
  doi          = {10.1186/1471-2105-12-494},
  timestamp    = {Mon, 05 Feb 2024 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/GundersenKAFHS11.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/PediciniBCCHKSB10,
  author       = {Marco Pedicini and
                  Fredrik Barren{\"{a}}s and
                  Trevor Clancy and
                  Filippo Castiglione and
                  Eivind Hovig and
                  Kartiek Kanduri and
                  Daniele Santoni and
                  Mikael Benson},
  title        = {Combining Network Modeling and Gene Expression Microarray Analysis
                  to Explore the Dynamics of Th1 and Th2 Cell Regulation},
  journal      = {PLoS Comput. Biol.},
  volume       = {6},
  number       = {12},
  year         = {2010},
  url          = {https://doi.org/10.1371/journal.pcbi.1001032},
  doi          = {10.1371/JOURNAL.PCBI.1001032},
  timestamp    = {Sat, 09 Apr 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/PediciniBCCHKSB10.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcsb/ThingnesOHO09,
  author       = {Josef Thingnes and
                  Leiv {\O}yehaug and
                  Eivind Hovig and
                  Stig W. Omholt},
  title        = {The mathematics of tanning},
  journal      = {{BMC} Syst. Biol.},
  volume       = {3},
  pages        = {60},
  year         = {2009},
  url          = {https://doi.org/10.1186/1752-0509-3-60},
  doi          = {10.1186/1752-0509-3-60},
  timestamp    = {Sun, 02 Oct 2022 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/bmcsb/ThingnesOHO09.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/LiuTSJBJTH07,
  author       = {Fang Liu and
                  Eivind T{\o}stesen and
                  Jostein K. Sundet and
                  Tor{-}Kristian Jenssen and
                  Christoph Bock and
                  Geir Ivar Jerstad and
                  William G. Thilly and
                  Eivind Hovig},
  title        = {The Human Genomic Melting Map},
  journal      = {PLoS Comput. Biol.},
  volume       = {3},
  number       = {5},
  year         = {2007},
  url          = {https://doi.org/10.1371/journal.pcbi.0030093},
  doi          = {10.1371/JOURNAL.PCBI.0030093},
  timestamp    = {Thu, 14 Oct 2021 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/ploscb/LiuTSJBJTH07.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/TostesenJH05,
  author       = {Eivind T{\o}stesen and
                  Geir Ivar Jerstad and
                  Eivind Hovig},
  title        = {Stitchprofiles.uio.no: analysis of partly melted {DNA} conformations
                  using stitch profiles},
  journal      = {Nucleic Acids Res.},
  volume       = {33},
  number       = {Web-Server-Issue},
  pages        = {573--576},
  year         = {2005},
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  doi          = {10.1093/NAR/GKI424},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/TostesenJH05.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/LiuJNSH04,
  author       = {Fang Liu and
                  Tor{-}Kristian Jenssen and
                  Vegard Nygaard and
                  John Sack and
                  Eivind Hovig},
  title        = {FigSearch: a figure legend indexing and classification system},
  journal      = {Bioinform.},
  volume       = {20},
  number       = {16},
  pages        = {2880--2882},
  year         = {2004},
  url          = {https://doi.org/10.1093/bioinformatics/bth316},
  doi          = {10.1093/BIOINFORMATICS/BTH316},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/LiuJNSH04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/csb/LiuJNSH04,
  author       = {Fang Liu and
                  Tor{-}Kristian Jenssen and
                  Vegard Nygaard and
                  John Sack and
                  Eivind Hovig},
  title        = {FigSearch: Using Maximum Entropy Classifier to Categorize Biological
                  Figures},
  booktitle    = {3rd International {IEEE} Computer Society Computational Systems Bioinformatics
                  Conference, {CSB} 2004, Stanford, CA, USA, August 16-19, 2004},
  pages        = {476--477},
  publisher    = {{IEEE} Computer Society},
  year         = {2004},
  url          = {https://doi.org/10.1109/CSB.2004.1332465},
  doi          = {10.1109/CSB.2004.1332465},
  timestamp    = {Thu, 23 Mar 2023 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/conf/csb/LiuJNSH04.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangMH03,
  author       = {Junbai Wang and
                  Ola Myklebost and
                  Eivind Hovig},
  title        = {MGraph: graphical models for microarray data analysis},
  journal      = {Bioinform.},
  volume       = {19},
  number       = {17},
  pages        = {2210--2211},
  year         = {2003},
  url          = {https://doi.org/10.1093/bioinformatics/btg298},
  doi          = {10.1093/BIOINFORMATICS/BTG298},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/WangMH03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/WangBJMH03,
  author       = {Junbai Wang and
                  Trond Hellem B{\o} and
                  Inge Jonassen and
                  Ola Myklebost and
                  Eivind Hovig},
  title        = {Tumor classification and marker gene prediction by feature selection
                  and fuzzy c-means clustering using microarray data},
  journal      = {{BMC} Bioinform.},
  volume       = {4},
  pages        = {60},
  year         = {2003},
  url          = {https://doi.org/10.1186/1471-2105-4-60},
  doi          = {10.1186/1471-2105-4-60},
  timestamp    = {Sun, 15 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bmcbi/WangBJMH03.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/WangNSHM02,
  author       = {Junbai Wang and
                  Vigdis Nygaard and
                  Birgitte Smith{-}S{\o}rensen and
                  Eivind Hovig and
                  Ola Myklebost},
  title        = {MArray: analysing single, replicated or reversed microarray experiments},
  journal      = {Bioinform.},
  volume       = {18},
  number       = {8},
  pages        = {1139--1140},
  year         = {2002},
  url          = {https://doi.org/10.1093/bioinformatics/18.8.1139},
  doi          = {10.1093/BIOINFORMATICS/18.8.1139},
  timestamp    = {Mon, 02 Mar 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/bioinformatics/WangNSHM02.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pkdd/KomorowskiHJTHSL00,
  author       = {Henryk Jan Komorowski and
                  Torgeir R. Hvidsten and
                  Tor{-}Kristian Jenssen and
                  Dyre Tjeldvoll and
                  Eivind Hovig and
                  Arne K. Sandvik and
                  Astrid L{\ae}greid},
  editor       = {Djamel A. Zighed and
                  Henryk Jan Komorowski and
                  Jan M. Zytkow},
  title        = {Towards Knowledge Discovery from cDNA Microarray Gene Expression Data},
  booktitle    = {Principles of Data Mining and Knowledge Discovery, 4th European Conference,
                  {PKDD} 2000, Lyon, France, September 13-16, 2000, Proceedings},
  series       = {Lecture Notes in Computer Science},
  volume       = {1910},
  pages        = {470--475},
  publisher    = {Springer},
  year         = {2000},
  url          = {https://doi.org/10.1007/3-540-45372-5\_53},
  doi          = {10.1007/3-540-45372-5\_53},
  timestamp    = {Mon, 05 Feb 2024 20:31:27 +0100},
  biburl       = {https://dblp.org/rec/conf/pkdd/KomorowskiHJTHSL00.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HainautSSHGHHM97,
  author       = {Pierre Hainaut and
                  Thierry Soussi and
                  Benny Shomer and
                  M. Hollstein and
                  M. Greenblatt and
                  Eivind Hovig and
                  C. C. Harris and
                  R. Montesano},
  title        = {Database of p53 gene somatic mutations in human tumors and cell lines:
                  updated compilation and future prospects},
  journal      = {Nucleic Acids Res.},
  volume       = {25},
  number       = {1},
  pages        = {151--157},
  year         = {1997},
  url          = {https://doi.org/10.1093/nar/25.1.151},
  doi          = {10.1093/NAR/25.1.151},
  timestamp    = {Thu, 05 Nov 2020 00:00:00 +0100},
  biburl       = {https://dblp.org/rec/journals/nar/HainautSSHGHHM97.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HollsteinSGSHMH96,
  author       = {M. Hollstein and
                  Benny Shomer and
                  M. Greenblatt and
                  Thierry Soussi and
                  Eivind Hovig and
                  R. Montesano and
                  C. C. Harris},
  title        = {Somatic point mutations in the p53 gene of human tumors and cell lines:
                  updated compilation},
  journal      = {Nucleic Acids Res.},
  volume       = {24},
  number       = {1},
  pages        = {141--146},
  year         = {1996},
  url          = {https://doi.org/10.1093/nar/24.1.141},
  doi          = {10.1093/NAR/24.1.141},
  timestamp    = {Sun, 17 May 2020 01:00:00 +0200},
  biburl       = {https://dblp.org/rec/journals/nar/HollsteinSGSHMH96.bib},
  bibsource    = {dblp computer science bibliography, https://dblp.org}
}
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