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ORCIDBibTeX records: Wayne Joubert
@article{DBLP:journals/ijhpca/HsuLKMGWJG23,
author = {Darren J. Hsu and
Hao Lu and
Aditya Kashi and
Michael A. Matheson and
John Gounley and
Feiyi Wang and
Wayne Joubert and
Jens Glaser},
title = {TwoFold: Highly accurate structure and affinity prediction for protein-ligand
complexes from sequences},
journal = {Int. J. High Perform. Comput. Appl.},
volume = {37},
number = {6},
pages = {666--682},
year = {2023},
url = {https://doi.org/10.1177/10943420231201151},
doi = {10.1177/10943420231201151},
timestamp = {Sun, 10 Dec 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ijhpca/HsuLKMGWJG23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pasc/CashmanVLLMASBP23,
author = {Mikaela Cashman and
Ver{\'{o}}nica G. Melesse Vergara and
John H. Lagergren and
Matthew Lane and
Jean Merlet and
Mikaela Atkinson and
Jared Streich and
Christopher E. Bradburne and
Raina Plowright and
Wayne Joubert and
Daniel A. Jacobson},
editor = {Axel Huebl and
Cristina Silvano and
Timothy Robinson},
title = {Longitudinal Effects on Plant Species Involved in Agriculture and
Pandemic Emergence Undergoing Changes in Abiotic Stress},
booktitle = {Proceedings of the Platform for Advanced Scientific Computing Conference,
{PASC} 2023, Davos, Switzerland, June 26-28, 2023},
pages = {3:1--3:10},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3592979.3593402},
doi = {10.1145/3592979.3593402},
timestamp = {Fri, 07 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/pasc/CashmanVLLMASBP23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pasc/MerletLVCBPGJJ23,
author = {Jean Merlet and
John H. Lagergren and
Ver{\'{o}}nica Melesse Vergara and
Mikaela Cashman and
Christopher E. Bradburne and
Raina Plowright and
Emily Gurley and
Wayne Joubert and
Daniel A. Jacobson},
editor = {Axel Huebl and
Cristina Silvano and
Timothy Robinson},
title = {Data-Driven Whole-Genome Clustering to Detect Geospatial, Temporal,
and Functional Trends in SARS-CoV-2 Evolution},
booktitle = {Proceedings of the Platform for Advanced Scientific Computing Conference,
{PASC} 2023, Davos, Switzerland, June 26-28, 2023},
pages = {26:1--26:7},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3592979.3593425},
doi = {10.1145/3592979.3593425},
timestamp = {Fri, 07 Jul 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/pasc/MerletLVCBPGJJ23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/Atchley0LBVBBBC23,
author = {Scott Atchley and
Christopher Zimmer and
John Lange and
David E. Bernholdt and
Ver{\'{o}}nica G. Melesse Vergara and
Thomas Beck and
Michael J. Brim and
Reuben D. Budiardja and
Sunita Chandrasekaran and
Markus Eisenbach and
Thomas M. Evans and
Matthew Ezell and
Nicholas Frontiere and
Antigoni Georgiadou and
Joe Glenski and
Philipp Grete and
Steven P. Hamilton and
John K. Holmen and
Axel Huebl and
Daniel A. Jacobson and
Wayne Joubert and
Kim H. McMahon and
Elia Merzari and
Stan G. Moore and
Andrew Myers and
Stephen Nichols and
Sarp Oral and
Thomas Papatheodore and
Danny Perez and
David M. Rogers and
Evan Schneider and
Jean{-}Luc Vay and
P. K. Yeung},
editor = {Dorian Arnold and
Rosa M. Badia and
Kathryn M. Mohror},
title = {Frontier: Exploring Exascale},
booktitle = {Proceedings of the International Conference for High Performance Computing,
Networking, Storage and Analysis, {SC} 2023, Denver, CO, USA, November
12-17, 2023},
pages = {52:1--52:16},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3581784.3607089},
doi = {10.1145/3581784.3607089},
timestamp = {Mon, 15 Apr 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/sc/Atchley0LBVBBBC23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/MalayaMGGLGDCRE23,
author = {Nicholas Malaya and
Bronson Messer and
Joseph Glenski and
Antigoni Georgiadou and
Justin Lietz and
Kalyana C. Gottiparthi and
Marc Day and
Jackie Chen and
Jon S. Rood and
Lucas Esclapez and
James B. White III and
Gustav R. Jansen and
Nicholas Curtis and
Stephen Nichols and
Jakub Kurzak and
Noel Chalmers and
Chip Freitag and
Paul T. Bauman and
Alessandro Fanfarillo and
Reuben D. Budiardja and
Thomas Papatheodore and
Nicholas Frontiere and
Damon McDougall and
Matthew R. Norman and
Sarat Sreepathi and
Philip C. Roth and
Dmytro Bykov and
Noah Wolfe and
Paul Mullowney and
Markus Eisenbach and
Marc T. Henry de Frahan and
Wayne Joubert},
editor = {Dorian Arnold and
Rosa M. Badia and
Kathryn M. Mohror},
title = {Experiences readying applications for Exascale},
booktitle = {Proceedings of the International Conference for High Performance Computing,
Networking, Storage and Analysis, {SC} 2023, Denver, CO, USA, November
12-17, 2023},
pages = {53:1--53:13},
publisher = {{ACM}},
year = {2023},
url = {https://doi.org/10.1145/3581784.3607065},
doi = {10.1145/3581784.3607065},
timestamp = {Thu, 09 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/sc/MalayaMGGLGDCRE23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/supercomputer/BudiardjaBEJJNRTM23,
author = {Reuben D. Budiardja and
Mark A. Berrill and
Markus Eisenbach and
Gustav R. Jansen and
Wayne Joubert and
Stephen Nichols and
David M. Rogers and
Arnold N. Tharrington and
O. E. Bronson Messer},
editor = {Abhinav Bhatele and
Jeff R. Hammond and
Marc Baboulin and
Carola Kruse},
title = {Ready for the Frontier: Preparing Applications for the World's First
Exascale System},
booktitle = {High Performance Computing - 38th International Conference, {ISC}
High Performance 2023, Hamburg, Germany, May 21-25, 2023, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {13948},
pages = {182--201},
publisher = {Springer},
year = {2023},
url = {https://doi.org/10.1007/978-3-031-32041-5\_10},
doi = {10.1007/978-3-031-32041-5\_10},
timestamp = {Wed, 17 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/supercomputer/BudiardjaBEJJNRTM23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2310-01586,
author = {Paul T. Bauman and
Reuben D. Budiardja and
Dmytro Bykov and
Noel Chalmers and
Jacqueline Chen and
Nicholas Curtis and
Marc Day and
Markus Eisenbach and
Lucas Esclapez and
Alessandro Fanfarillo and
William Freitag and
Nicholas Frontiere and
Antigoni Georgiadou and
Joseph Glenski and
Kalyana C. Gottiparthi and
Marc T. Henry de Frahan and
Gustav R. Jansen and
Wayne Joubert and
Justin G. Lietz and
Jakub Kurzak and
Nicholas Malaya and
Bronson Messer and
Damon McDougall and
Paul Mullowney and
Stephen Nichols and
Matthew R. Norman and
Thomas Papatheodore and
Jon S. Rood and
Philip C. Roth and
Sarat Sreepathi and
James B. White III and
Noah Wolfe},
title = {Experiences Readying Applications for Exascale},
journal = {CoRR},
volume = {abs/2310.01586},
year = {2023},
url = {https://doi.org/10.48550/arXiv.2310.01586},
doi = {10.48550/ARXIV.2310.01586},
eprinttype = {arXiv},
eprint = {2310.01586},
timestamp = {Fri, 03 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2310-01586.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/JoubertMRGLEY22,
author = {Wayne Joubert and
Bronson Messer and
Philip C. Roth and
Antigoni Georgiadou and
Justin Lietz and
Markus Eisenbach and
Junqi Yin},
title = {Learning to Scale the Summit: {AI} for Science on a Leadership Supercomputer},
booktitle = {{IEEE} International Parallel and Distributed Processing Symposium,
{IPDPS} Workshops 2022, Lyon, France, May 30 - June 3, 2022},
pages = {1246--1255},
publisher = {{IEEE}},
year = {2022},
url = {https://doi.org/10.1109/IPDPSW55747.2022.00221},
doi = {10.1109/IPDPSW55747.2022.00221},
timestamp = {Mon, 08 Aug 2022 16:44:20 +0200},
biburl = {https://dblp.org/rec/conf/ipps/JoubertMRGLEY22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/LuMOEJW22,
author = {Hao Lu and
Michael A. Matheson and
Vladyslav Oles and
J. Austin Ellis and
Wayne Joubert and
Feiyi Wang},
editor = {Felix Wolf and
Sameer Shende and
Candace Culhane and
Sadaf R. Alam and
Heike Jagode},
title = {Climbing the Summit and Pushing the Frontier of Mixed Precision Benchmarks
at Extreme Scale},
booktitle = {{SC22:} International Conference for High Performance Computing, Networking,
Storage and Analysis, Dallas, TX, USA, November 13-18, 2022},
pages = {78:1--78:15},
publisher = {{IEEE}},
year = {2022},
url = {https://doi.org/10.1109/SC41404.2022.00083},
doi = {10.1109/SC41404.2022.00083},
timestamp = {Thu, 31 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/sc/LuMOEJW22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/concurrency/LarreaBGDHJ20,
author = {Ver{\'{o}}nica G. Vergara Larrea and
Reuben D. Budiardja and
Rahulkumar Gayatri and
Christopher S. Daley and
Oscar R. Hernandez and
Wayne Joubert},
title = {Experiences in porting mini-applications to OpenACC and OpenMP on
heterogeneous systems},
journal = {Concurr. Comput. Pract. Exp.},
volume = {32},
number = {20},
year = {2020},
url = {https://doi.org/10.1002/cpe.5780},
doi = {10.1002/CPE.5780},
timestamp = {Wed, 18 May 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/concurrency/LarreaBGDHJ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ibmrd/LuoSSBBDFGGHHAJ20,
author = {Lixiang Luo and
Tjerk P. Straatsma and
Luis Enrique Aguilar{-}Su{\'{a}}rez and
Ria Broer and
Dmytro Bykov and
Eduardo F. D'Azevedo and
Shirin S. Faraji and
Kalyana C. Gottiparthi and
Coen de Graaf and
James Austin Harris and
Remco W. A. Havenith and
Hans J{\o}rgen Aagard Jensen and
Wayne Joubert and
R. K. Kathir and
Jeff Larkin and
Ying Wai Li and
Dmitry I. Lyakh and
O. E. Bronson Messer and
Matthew R. Norman and
Joseph C. Oefelein and
Ramanan Sankaran and
Andreas F. Tillack and
Ashleigh L. Barnes and
Lucas Visscher and
Jack C. Wells and
Meilani Wibowo},
title = {Pre-exascale accelerated application development: The {ORNL} Summit
experience},
journal = {{IBM} J. Res. Dev.},
volume = {64},
number = {3/4},
pages = {11:1--11:21},
year = {2020},
url = {https://doi.org/10.1147/JRD.2020.2965881},
doi = {10.1147/JRD.2020.2965881},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ibmrd/LuoSSBBDFGGHHAJ20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/concurrency/LarreaBJBBHOSM19,
author = {Ver{\'{o}}nica G. Vergara Larrea and
Michael J. Brim and
Wayne Joubert and
Swen Boehm and
Matthew B. Baker and
Oscar R. Hernandez and
Sarp Oral and
James Simmons and
Don Maxwell},
title = {Are we witnessing the spectre of an {HPC} meltdown?},
journal = {Concurr. Comput. Pract. Exp.},
volume = {31},
number = {16},
year = {2019},
url = {https://doi.org/10.1002/cpe.5020},
doi = {10.1002/CPE.5020},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/concurrency/LarreaBJBBHOSM19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cphysics/SearlesCJH19,
author = {Robert Searles and
Sunita Chandrasekaran and
Wayne Joubert and
Oscar R. Hernandez},
title = {{MPI} + OpenACC: Accelerating radiation transport mini-application,
minisweep, on heterogeneous systems},
journal = {Comput. Phys. Commun.},
volume = {236},
pages = {176--187},
year = {2019},
url = {https://doi.org/10.1016/j.cpc.2018.10.007},
doi = {10.1016/J.CPC.2018.10.007},
timestamp = {Fri, 21 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/cphysics/SearlesCJH19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ibmrd/WombleSJJWN19,
author = {David E. Womble and
Mallikarjun Shankar and
Wayne Joubert and
J. Travis Johnston and
Jack C. Wells and
Jeffrey A. Nichols},
title = {Early experiences on Summit: Data analytics and {AI} applications},
journal = {{IBM} J. Res. Dev.},
volume = {63},
number = {6},
pages = {2:1--2:9},
year = {2019},
url = {https://doi.org/10.1147/JRD.2019.2944146},
doi = {10.1147/JRD.2019.2944146},
timestamp = {Fri, 27 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ibmrd/WombleSJJWN19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijhpcn/LopezJLHHTD19,
author = {M. Graham Lopez and
Wayne Joubert and
Ver{\'{o}}nica G. Vergara Larrea and
Oscar R. Hernandez and
Azzam Haidar and
Stanimire Tomov and
Jack J. Dongarra},
title = {Evaluation of directive-based performance portable programming models},
journal = {Int. J. High Perform. Comput. Netw.},
volume = {14},
number = {2},
pages = {165--182},
year = {2019},
url = {https://doi.org/10.1504/IJHPCN.2017.10009064},
doi = {10.1504/IJHPCN.2017.10009064},
timestamp = {Thu, 09 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijhpcn/LopezJLHHTD19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/pc/JoubertNCWJ19,
author = {Wayne Joubert and
James Nance and
Sharlee Climer and
Deborah A. Weighill and
Daniel A. Jacobson},
title = {Parallel accelerated Custom Correlation Coefficient calculations for
genomics applications},
journal = {Parallel Comput.},
volume = {84},
pages = {15--23},
year = {2019},
url = {https://doi.org/10.1016/j.parco.2019.02.003},
doi = {10.1016/J.PARCO.2019.02.003},
timestamp = {Sat, 22 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/pc/JoubertNCWJ19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/supercomputer/LarreaJBBME0BEO19,
author = {Ver{\'{o}}nica G. Vergara Larrea and
Wayne Joubert and
Michael J. Brim and
Reuben D. Budiardja and
Don Maxwell and
Matthew Ezell and
Christopher Zimmer and
Swen Boehm and
Wael R. Elwasif and
Sarp Oral and
Chris Fuson and
Daniel Pelfrey and
Oscar R. Hernandez and
Dustin Leverman and
Jesse Hanley and
Mark A. Berrill and
Arnold N. Tharrington},
editor = {Mich{\`{e}}le Weiland and
Guido Juckeland and
Sadaf R. Alam and
Heike Jagode},
title = {Scaling the Summit: Deploying the World's Fastest Supercomputer},
booktitle = {High Performance Computing - {ISC} High Performance 2019 International
Workshops, Frankfurt, Germany, June 16-20, 2019, Revised Selected
Papers},
series = {Lecture Notes in Computer Science},
volume = {11887},
pages = {330--351},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-34356-9\_26},
doi = {10.1007/978-3-030-34356-9\_26},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/supercomputer/LarreaJBBME0BEO19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijhpca/MesserDHJBZ18,
author = {O. E. Bronson Messer and
Eduardo F. D'Azevedo and
Judy Hill and
Wayne Joubert and
Mark A. Berrill and
Christopher Zimmer},
title = {MiniApps derived from production {HPC} applications using multiple
programing models},
journal = {Int. J. High Perform. Comput. Appl.},
volume = {32},
number = {4},
pages = {582--593},
year = {2018},
url = {https://doi.org/10.1177/1094342016668241},
doi = {10.1177/1094342016668241},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ijhpca/MesserDHJBZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/pc/JoubertNWJ18,
author = {Wayne Joubert and
James Nance and
Deborah A. Weighill and
Daniel A. Jacobson},
title = {Parallel accelerated vector similarity calculations for genomics applications},
journal = {Parallel Comput.},
volume = {75},
pages = {130--145},
year = {2018},
url = {https://doi.org/10.1016/j.parco.2018.03.009},
doi = {10.1016/J.PARCO.2018.03.009},
timestamp = {Sat, 22 Feb 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/pc/JoubertNWJ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pasc/SearlesCJH18,
author = {Robert Searles and
Sunita Chandrasekaran and
Wayne Joubert and
Oscar R. Hernandez},
title = {Abstractions and Directives for Adapting Wavefront Algorithms to Future
Architectures},
booktitle = {Proceedings of the Platform for Advanced Scientific Computing Conference,
{PASC} 2018, Basel, Switzerland, July 02-04, 2018},
pages = {4:1--4:10},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3218176.3218228},
doi = {10.1145/3218176.3218228},
timestamp = {Wed, 21 Nov 2018 12:44:05 +0100},
biburl = {https://dblp.org/rec/conf/pasc/SearlesCJH18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/ZhangJWWTNSTBL18,
author = {Wenlu Zhang and
Wayne Joubert and
Peng Wang and
Bei Wang and
William Tang and
Matthew Niemerg and
Lei Shi and
Sam Taimourzadeh and
Jian Bao and
Zhihong Lin},
editor = {Sunita Chandrasekaran and
Guido Juckeland and
Sandra Wienke},
title = {Heterogeneous Programming and Optimization of Gyrokinetic Toroidal
Code Using Directives},
booktitle = {Accelerator Programming Using Directives - 5th International Workshop,
{WACCPD} 2018, Dallas, TX, USA, November 11-17, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11381},
pages = {3--21},
publisher = {Springer},
year = {2018},
url = {https://doi.org/10.1007/978-3-030-12274-4\_1},
doi = {10.1007/978-3-030-12274-4\_1},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/sc/ZhangJWWTNSTBL18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/VazhkudaiSBGSKZ18,
author = {Sudharshan S. Vazhkudai and
Bronis R. de Supinski and
Arthur S. Bland and
Al Geist and
James C. Sexton and
Jim Kahle and
Christopher Zimmer and
Scott Atchley and
Sarp Oral and
Don E. Maxwell and
Ver{\'{o}}nica G. Vergara Larrea and
Adam Bertsch and
Robin Goldstone and
Wayne Joubert and
Chris Chambreau and
David Appelhans and
Robert Blackmore and
Ben Casses and
George Chochia and
Gene Davison and
Matthew A. Ezell and
Tom Gooding and
Elsa Gonsiorowski and
Leopold Grinberg and
Bill Hanson and
Bill Hartner and
Ian Karlin and
Matthew L. Leininger and
Dustin Leverman and
Chris Marroquin and
Adam Moody and
Martin Ohmacht and
Ramesh Pankajakshan and
Fernando Pizzano and
James H. Rogers and
Bryan S. Rosenburg and
Drew Schmidt and
Mallikarjun Shankar and
Feiyi Wang and
Py Watson and
Bob Walkup and
Lance D. Weems and
Junqi Yin},
title = {The design, deployment, and evaluation of the {CORAL} pre-exascale
systems},
booktitle = {Proceedings of the International Conference for High Performance Computing,
Networking, Storage, and Analysis, {SC} 2018, Dallas, TX, USA, November
11-16, 2018},
pages = {52:1--52:12},
publisher = {{IEEE} / {ACM}},
year = {2018},
url = {http://dl.acm.org/citation.cfm?id=3291726},
timestamp = {Tue, 10 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/sc/VazhkudaiSBGSKZ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/JoubertWKCJFJ18,
author = {Wayne Joubert and
Deborah A. Weighill and
David Kainer and
Sharlee Climer and
Amy Justice and
Kjiersten Fagnan and
Daniel A. Jacobson},
title = {Attacking the opioid epidemic: determining the epistatic and pleiotropic
genetic architectures for chronic pain and opioid addiction},
booktitle = {Proceedings of the International Conference for High Performance Computing,
Networking, Storage, and Analysis, {SC} 2018, Dallas, TX, USA, November
11-16, 2018},
pages = {57:1--57:14},
publisher = {{IEEE} / {ACM}},
year = {2018},
url = {http://dl.acm.org/citation.cfm?id=3291732},
timestamp = {Mon, 03 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/sc/JoubertWKCJFJ18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/supercomputer/LarreaJBBTEM17,
author = {Ver{\'{o}}nica G. Vergara Larrea and
Wayne Joubert and
Mark A. Berrill and
Swen Boehm and
Arnold N. Tharrington and
Wael R. Elwasif and
Don E. Maxwell},
editor = {Julian M. Kunkel and
Rio Yokota and
Michela Taufer and
John Shalf},
title = {Experiences Evaluating Functionality and Performance of {IBM} {POWER8+}
Systems},
booktitle = {High Performance Computing - {ISC} High Performance 2017 International
Workshops, DRBSD, ExaComm, HCPM, HPC-IODC, IWOPH, IXPUG, P{\^{}}3MA,
VHPC, Visualization at Scale, WOPSSS, Frankfurt, Germany, June 18-22,
2017, Revised Selected Papers},
series = {Lecture Notes in Computer Science},
volume = {10524},
pages = {254--274},
publisher = {Springer},
year = {2017},
url = {https://doi.org/10.1007/978-3-319-67630-2\_20},
doi = {10.1007/978-3-319-67630-2\_20},
timestamp = {Mon, 16 Sep 2019 15:29:34 +0200},
biburl = {https://dblp.org/rec/conf/supercomputer/LarreaJBBTEM17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/JoubertNWJ17,
author = {Wayne Joubert and
James Nance and
Deborah A. Weighill and
Daniel A. Jacobson},
title = {Parallel Accelerated Vector Similarity Calculations for Genomics Applications},
journal = {CoRR},
volume = {abs/1705.08210},
year = {2017},
url = {http://arxiv.org/abs/1705.08210},
eprinttype = {arXiv},
eprint = {1705.08210},
timestamp = {Mon, 03 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/JoubertNWJ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/JoubertNCWJ17,
author = {Wayne Joubert and
James Nance and
Sharlee Climer and
Deborah A. Weighill and
Daniel A. Jacobson},
title = {Parallel Accelerated Custom Correlation Coefficient Calculations for
Genomics Applications},
journal = {CoRR},
volume = {abs/1705.08213},
year = {2017},
url = {http://arxiv.org/abs/1705.08213},
eprinttype = {arXiv},
eprint = {1705.08213},
timestamp = {Wed, 25 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/JoubertNCWJ17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/LopezLJHHTD16,
author = {M. Graham Lopez and
Ver{\'{o}}nica G. Vergara Larrea and
Wayne Joubert and
Oscar R. Hernandez and
Azzam Haidar and
Stanimire Tomov and
Jack J. Dongarra},
title = {Towards Achieving Performance Portability Using Directives for Accelerators},
booktitle = {Third Workshop on Accelerator Programming Using Directives, WACCPD@SC
2016, Salt Lake City, UT, USA, November 14, 2016},
pages = {13--24},
publisher = {{IEEE} Computer Society},
year = {2016},
url = {https://doi.org/10.1109/WACCPD.2016.006},
doi = {10.1109/WACCPD.2016.006},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/sc/LopezLJHHTD16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/supercomputer/JuckelandHJNLWB16,
author = {Guido Juckeland and
Oscar R. Hernandez and
Arpith C. Jacob and
Daniel Neilson and
Ver{\'{o}}nica G. Vergara Larrea and
Sandra Wienke and
Alexander Bobyr and
William C. Brantley and
Sunita Chandrasekaran and
Mathew E. Colgrove and
Alexander Grund and
Robert Henschel and
Wayne Joubert and
Matthias S. M{\"{u}}ller and
Dave Raddatz and
Pavel Shelepugin and
Brian Whitney and
Bo Wang and
Kalyan Kumaran},
editor = {Michela Taufer and
Bernd Mohr and
Julian M. Kunkel},
title = {From Describing to Prescribing Parallelism: Translating the {SPEC}
{ACCEL} OpenACC Suite to OpenMP Target Directives},
booktitle = {High Performance Computing - {ISC} High Performance 2016 International
Workshops, ExaComm, E-MuCoCoS, HPC-IODC, IXPUG, IWOPH, P{\^{}}3MA,
VHPC, WOPSSS, Frankfurt, Germany, June 19-23, 2016, Revised Selected
Papers},
series = {Lecture Notes in Computer Science},
volume = {9945},
pages = {470--488},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-46079-6\_33},
doi = {10.1007/978-3-319-46079-6\_33},
timestamp = {Tue, 29 Dec 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/supercomputer/JuckelandHJNLWB16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cee/JoubertABBEGLLM15,
author = {Wayne Joubert and
Rick Archibald and
Mark A. Berrill and
W. Michael Brown and
Markus Eisenbach and
Ray W. Grout and
Jeff Larkin and
John M. Levesque and
Bronson Messer and
Matthew R. Norman and
Bobby Philip and
Ramanan Sankaran and
Arnold N. Tharrington and
John A. Turner},
title = {Accelerated application development: The {ORNL} Titan experience},
journal = {Comput. Electr. Eng.},
volume = {46},
pages = {123--138},
year = {2015},
url = {https://doi.org/10.1016/j.compeleceng.2015.04.008},
doi = {10.1016/J.COMPELECENG.2015.04.008},
timestamp = {Wed, 19 May 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cee/JoubertABBEGLLM15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cluster/MesserDHJLT15,
author = {O. E. Bronson Messer and
Eduardo F. D'Azevedo and
Judith C. Hill and
Wayne Joubert and
S. Laosooksathit and
Arnold N. Tharrington},
title = {Developing MiniApps on Modern Platforms Using Multiple Programming
Models},
booktitle = {2015 {IEEE} International Conference on Cluster Computing, {CLUSTER}
2015, Chicago, IL, USA, September 8-11, 2015},
pages = {753--759},
publisher = {{IEEE} Computer Society},
year = {2015},
url = {https://doi.org/10.1109/CLUSTER.2015.130},
doi = {10.1109/CLUSTER.2015.130},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/cluster/MesserDHJLT15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/hpcc/KartsaklisJHEEB15,
author = {Christos Kartsaklis and
Wayne Joubert and
Oscar R. Hernandez and
Markus Eisenbach and
Wael R. Elwasif and
David E. Bernholdt},
title = {{CUDA} Grid-Level Task Progression Algorithms},
booktitle = {17th {IEEE} International Conference on High Performance Computing
and Communications, {HPCC} 2015, 7th {IEEE} International Symposium
on Cyberspace Safety and Security, {CSS} 2015, and 12th {IEEE} International
Conference on Embedded Software and Systems, {ICESS} 2015, New York,
NY, USA, August 24-26, 2015},
pages = {1628--1632},
publisher = {{IEEE}},
year = {2015},
url = {https://doi.org/10.1109/HPCC-CSS-ICESS.2015.53},
doi = {10.1109/HPCC-CSS-ICESS.2015.53},
timestamp = {Fri, 20 Dec 2019 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/hpcc/KartsaklisJHEEB15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/RossinelliTLABH15,
author = {Diego Rossinelli and
Yu{-}Hang Tang and
Kirill Lykov and
Dmitry Alexeev and
Massimo Bernaschi and
Panagiotis E. Hadjidoukas and
Mauro Bisson and
Wayne Joubert and
Christian Conti and
George E. Karniadakis and
Massimiliano Fatica and
Igor Pivkin and
Petros Koumoutsakos},
editor = {Jackie Kern and
Jeffrey S. Vetter},
title = {The in-silico lab-on-a-chip: petascale and high-throughput simulations
of microfluidics at cell resolution},
booktitle = {Proceedings of the International Conference for High Performance Computing,
Networking, Storage and Analysis, {SC} 2015, Austin, TX, USA, November
15-20, 2015},
pages = {2:1--2:12},
publisher = {{ACM}},
year = {2015},
url = {https://doi.org/10.1145/2807591.2807677},
doi = {10.1145/2807591.2807677},
timestamp = {Fri, 09 Apr 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/sc/RossinelliTLABH15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ics/JoubertS12,
author = {Wayne Joubert and
Shi{-}Quan Su},
editor = {Utpal Banerjee and
Kyle A. Gallivan and
Gianfranco Bilardi and
Manolis Katevenis},
title = {An analysis of computational workloads for the {ORNL} Jaguar system},
booktitle = {International Conference on Supercomputing, ICS'12, Venice, Italy,
June 25-29, 2012},
pages = {247--256},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2304576.2304611},
doi = {10.1145/2304576.2304611},
timestamp = {Tue, 06 Nov 2018 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ics/JoubertS12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ipps/KartsaklisHHIJG12,
author = {Christos Kartsaklis and
Oscar R. Hernandez and
Chung{-}Hsing Hsu and
Thomas Ilsche and
Wayne Joubert and
Richard L. Graham},
title = {{HERCULES:} {A} Pattern Driven Code Transformation System},
booktitle = {26th {IEEE} International Parallel and Distributed Processing Symposium
Workshops {\&} PhD Forum, {IPDPS} 2012, Shanghai, China, May 21-25,
2012},
pages = {574--583},
publisher = {{IEEE} Computer Society},
year = {2012},
url = {https://doi.org/10.1109/IPDPSW.2012.69},
doi = {10.1109/IPDPSW.2012.69},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ipps/KartsaklisHHIJG12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sc/BakerDEHJJ12,
author = {Christopher Baker and
Gregory G. Davidson and
Thomas M. Evans and
Steven P. Hamilton and
Joshua J. Jarrell and
Wayne Joubert},
editor = {Jeffrey K. Hollingsworth},
title = {High performance radiation transport simulations: preparing for Titan},
booktitle = {{SC} Conference on High Performance Computing Networking, Storage
and Analysis, {SC} '12, Salt Lake City, UT, {USA} - November 11 -
15, 2012},
pages = {47},
publisher = {{IEEE/ACM}},
year = {2012},
url = {https://doi.org/10.1109/SC.2012.64},
doi = {10.1109/SC.2012.64},
timestamp = {Fri, 24 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/sc/BakerDEHJJ12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ppsc/Joubert99,
author = {Wayne Joubert},
title = {Results on Parallelization Strategies for {ILU} Preconditioners},
booktitle = {Proceedings of the Ninth {SIAM} Conference on Parallel Processing
for Scientific Computing, {PPSC} 1999, San Antonio, Texas, USA, March
22-24, 1999},
publisher = {{SIAM}},
year = {1999},
timestamp = {Mon, 20 Mar 2017 14:21:45 +0100},
biburl = {https://dblp.org/rec/conf/ppsc/Joubert99.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siammax/FaberJKM96,
author = {Vance Faber and
Wayne Joubert and
Emanuel Knill and
Thomas A. Manteuffel},
title = {Minimal Residual Method Stronger than Polynomial Preconditioning},
journal = {{SIAM} J. Matrix Anal. Appl.},
volume = {17},
number = {4},
pages = {707--729},
year = {1996},
url = {https://doi.org/10.1137/S0895479895286748},
doi = {10.1137/S0895479895286748},
timestamp = {Sat, 30 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siammax/FaberJKM96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamsc/LorberCJ96,
author = {Alfred A. Lorber and
Graham F. Carey and
Wayne Joubert},
title = {{ODE} Recursions and Iterative Solvers for Linear Equations},
journal = {{SIAM} J. Sci. Comput.},
volume = {17},
number = {1},
pages = {65--77},
year = {1996},
url = {https://doi.org/10.1137/0917006},
doi = {10.1137/0917006},
timestamp = {Thu, 30 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamsc/LorberCJ96.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ijhsc/JoubertC94,
author = {Wayne Joubert and
Graham F. Carey},
title = {Embedded Gradient Iterative Solution of a Class of Nonlinear Pde's
on the Connection Machine},
journal = {Int. J. High Speed Comput.},
volume = {6},
number = {2},
pages = {277--286},
year = {1994},
url = {https://doi.org/10.1142/S0129053394000135},
doi = {10.1142/S0129053394000135},
timestamp = {Tue, 08 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ijhsc/JoubertC94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nla/JoubertO94,
author = {Wayne Joubert and
Thomas Oppe},
title = {Improved {SSOR} and incomplete Cholesky solution of linear equations
on shared memory and distributed memory parallel computers},
journal = {Numer. Linear Algebra Appl.},
volume = {1},
number = {3},
pages = {287--311},
year = {1994},
url = {https://doi.org/10.1002/nla.1680010306},
doi = {10.1002/NLA.1680010306},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nla/JoubertO94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nla/Joubert94,
author = {Wayne Joubert},
title = {On the convergence behavior of the restarted {GMRES} algorithm for
solving nonsymmetric linear systems},
journal = {Numer. Linear Algebra Appl.},
volume = {1},
number = {5},
pages = {427--447},
year = {1994},
url = {https://doi.org/10.1002/nla.1680010502},
doi = {10.1002/NLA.1680010502},
timestamp = {Mon, 11 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nla/Joubert94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamsc/Joubert94,
author = {Wayne Joubert},
title = {A Robust GMRES-Based Adaptive Polynomial Preconditioning Algorithm
for Nonsymmetric Linear Systems},
journal = {{SIAM} J. Sci. Comput.},
volume = {15},
number = {2},
pages = {427--439},
year = {1994},
url = {https://doi.org/10.1137/0915029},
doi = {10.1137/0915029},
timestamp = {Thu, 30 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamsc/Joubert94.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ppsc/JoubertC93,
author = {Wayne Joubert and
Graham F. Carey},
editor = {Richard F. Sincovec and
David E. Keyes and
Michael R. Leuze and
Linda R. Petzold and
Daniel A. Reed},
title = {{PCG:} {A} Software Package for the Iterative Solution of Linear Systems
on Scalar, Vector and Parallel Computers},
booktitle = {Proceedings of the Sixth {SIAM} Conference on Parallel Processing
for Scientific Computing, {PPSC} 1993, Norfolk, Virginia, USA, March
22-24, 1993},
pages = {515--518},
publisher = {{SIAM}},
year = {1993},
timestamp = {Mon, 20 Mar 2017 14:21:45 +0100},
biburl = {https://dblp.org/rec/conf/ppsc/JoubertC93.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siammax/Joubert92,
author = {Wayne Joubert},
title = {Lanczos Methods for the Solution of Nonsymmetric Systems of Linear
Equations},
journal = {{SIAM} J. Matrix Anal. Appl.},
volume = {13},
number = {3},
pages = {926--943},
year = {1992},
url = {https://doi.org/10.1137/0613056},
doi = {10.1137/0613056},
timestamp = {Tue, 26 May 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siammax/Joubert92.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/siamsc/JoubertMPW92,
author = {Wayne Joubert and
Thomas A. Manteuffel and
Seymour V. Parter and
Sze{-}Ping Wong},
title = {Preconditioning Second-Order Elliptic Operators: Experiment and Theory},
journal = {{SIAM} J. Sci. Comput.},
volume = {13},
number = {1},
pages = {259--288},
year = {1992},
url = {https://doi.org/10.1137/0913014},
doi = {10.1137/0913014},
timestamp = {Thu, 30 Jul 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/siamsc/JoubertMPW92.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ppsc/JoubertC91,
author = {Wayne Joubert and
Graham F. Carey},
editor = {Jack J. Dongarra and
Ken Kennedy and
Paul Messina and
Danny C. Sorensen and
Robert G. Voigt},
title = {Parallelizable Restarted Iterative Methods for Nonsymmetric Linear
Systems},
booktitle = {Proceedings of the Fifth {SIAM} Conference on Parallel Processing
for Scientific Computing, Houston, Texas, USA, March 25-27, 1991},
pages = {138--143},
publisher = {{SIAM}},
year = {1991},
timestamp = {Mon, 21 Aug 2017 16:43:26 +0200},
biburl = {https://dblp.org/rec/conf/ppsc/JoubertC91.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ppsc/JoubertHC91,
author = {Wayne Joubert and
Peter Highnam and
Graham F. Carey},
editor = {Jack J. Dongarra and
Ken Kennedy and
Paul Messina and
Danny C. Sorensen and
Robert G. Voigt},
title = {{PCG/CM:} {A} Package for the Iterative Solution of Large Sparse Linear
Systems ond the Connection Machine},
booktitle = {Proceedings of the Fifth {SIAM} Conference on Parallel Processing
for Scientific Computing, Houston, Texas, USA, March 25-27, 1991},
pages = {631--336},
publisher = {{SIAM}},
year = {1991},
timestamp = {Wed, 29 May 2002 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/ppsc/JoubertHC91.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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