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ORCIDBibTeX records: Christian J. A. Sigrist
@article{DBLP:journals/bioinformatics/CoudertGCPBNSRBBAAAABBNB23,
author = {Elisabeth Coudert and
Sebastien Gehant and
Edouard De Castro and
Monica Pozzato and
Delphine Baratin and
Teresa Batista Neto and
Christian J. A. Sigrist and
Nicole Redaschi and
Alan Bridge and
Alan J. Bridge and
Lucila Aimo and
Ghislaine Argoud{-}Puy and
Andrea H. Auchincloss and
Kristian B. Axelsen and
Parit Bansal and
Marie{-}Claude Blatter and
Jerven T. Bolleman and
Emmanuel Boutet and
Lionel Breuza and
Blanca Cabrera Gil and
Cristina Casals{-}Casas and
Kamal Chikh Echioukh and
B{\'{e}}atrice A. Cuche and
Anne Estreicher and
Maria Livia Famiglietti and
Marc Feuermann and
Elisabeth Gasteiger and
Pascale Gaudet and
Vivienne Baillie Gerritsen and
Arnaud Gos and
Nadine Gruaz{-}Gumowski and
Chantal Hulo and
Nevila Hyka{-}Nouspikel and
Florence Jungo and
Arnaud Kerhornou and
Philippe Le Mercier and
Damien Lieberherr and
Patrick Masson and
Anne Morgat and
Venkatesh Muthukrishnan and
Salvo Paesano and
Ivo Pedruzzi and
Sandrine Pilbout and
Lucille Pourcel and
Sylvain Poux and
Manuela Pruess and
Catherine Rivoire and
Karin Sonesson and
Shyamala Sundaram and
Alex Bateman and
Maria Jesus Martin and
Sandra E. Orchard and
Michele Magrane and
Shadab Ahmad and
Emanuele Alpi and
Emily H. Bowler{-}Barnett and
Ramona Britto and
Hema Bye{-}A{-}Jee and
Austra Cukura and
Paul Denny and
Tunca Dogan and
Thankgod Ebenezer and
Jun Fan and
Penelope Garmiri and
Leonardo Jose da Costa Gonzales and
Emma Hatton{-}Ellis and
Abdulrahman Hussein and
Alexandr Ignatchenko and
Giuseppe Insana and
Rizwan Ishtiaq and
Vishal Joshi and
Dushyanth Jyothi and
Swaathi Kandasamy and
Antonia Lock and
Aurelien Luciani and
Marija Lugaric and
Jie Luo and
Yvonne Lussi and
Alistair MacDougall and
F{\'{a}}bio Madeira and
Mahdi Mahmoudy and
Alok Mishra and
Katie Moulang and
Andrew Nightingale and
Sangya Pundir and
Guoying Qi and
Shriya Raj and
Pedro Raposo and
Daniel Rice and
Rabie Saidi and
Rafael Santos and
Elena Speretta and
James D. Stephenson and
Prabhat Totoo and
Edward Turner and
Nidhi Tyagi and
Preethi Vasudev and
Kate Warner and
Xavier Watkins and
Rossana Zaru and
Hermann Zellner and
Cathy H. Wu and
Cecilia N. Arighi and
Leslie Arminski and
Chuming Chen and
Yongxing Chen and
Hongzhan Huang and
Kati Laiho and
Peter B. McGarvey and
Darren A. Natale and
Karen Ross and
C. R. Vinayaka and
Qinghua Wang and
Yuqi Wang},
title = {Annotation of biologically relevant ligands in UniProtKB using ChEBI},
journal = {Bioinform.},
volume = {39},
number = {1},
year = {2023},
url = {https://doi.org/10.1093/bioinformatics/btac793},
doi = {10.1093/BIOINFORMATICS/BTAC793},
timestamp = {Fri, 15 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/CoudertGCPBNSRBBAAAABBNB23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/PaysanLafosseBCGPSBBBCGHLMMNOPRSSTT23,
author = {Typhaine Paysan{-}Lafosse and
Matthias Blum and
Sara Chuguransky and
Tiago Grego and
Beatriz L{\'{a}}zaro Pinto and
Gustavo A. Salazar and
Maxwell L. Bileschi and
Peer Bork and
Alan J. Bridge and
Lucy J. Colwell and
Julian Gough and
Daniel H. Haft and
Ivica Letunic and
Aron Marchler{-}Bauer and
Huaiyu Mi and
Darren A. Natale and
Christine A. Orengo and
Arun Prasad Pandurangan and
Catherine Rivoire and
Christian J. A. Sigrist and
Ian Sillitoe and
Narmada Thanki and
Paul D. Thomas and
Silvio C. E. Tosatto and
Cathy H. Wu and
Alex Bateman},
title = {InterPro in 2022},
journal = {Nucleic Acids Res.},
volume = {51},
number = {{D1}},
pages = {418--427},
year = {2023},
url = {https://doi.org/10.1093/nar/gkac993},
doi = {10.1093/NAR/GKAC993},
timestamp = {Fri, 15 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/PaysanLafosseBCGPSBBBCGHLMMNOPRSSTT23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BlumCCGKMNPQRRS21,
author = {Matthias Blum and
Hsin{-}Yu Chang and
Sara Chuguransky and
Tiago Grego and
Swaathi Kandasamy and
Alex L. Mitchell and
Gift Nuka and
Typhaine Paysan{-}Lafosse and
Matloob Qureshi and
Shriya Raj and
Lorna J. Richardson and
Gustavo A. Salazar and
Lowri Williams and
Peer Bork and
Alan J. Bridge and
Julian Gough and
Daniel H. Haft and
Ivica Letunic and
Aron Marchler{-}Bauer and
Huaiyu Mi and
Darren A. Natale and
Marco Necci and
Christine A. Orengo and
Arun Prasad Pandurangan and
Catherine Rivoire and
Christian J. A. Sigrist and
Ian Sillitoe and
Narmada Thanki and
Paul D. Thomas and
Silvio C. E. Tosatto and
Cathy H. Wu and
Alex Bateman and
Robert D. Finn},
title = {The InterPro protein families and domains database: 20 years on},
journal = {Nucleic Acids Res.},
volume = {49},
number = {Database-Issue},
pages = {D344--D354},
year = {2021},
url = {https://doi.org/10.1093/nar/gkaa977},
doi = {10.1093/NAR/GKAA977},
timestamp = {Fri, 15 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/BlumCCGKMNPQRRS21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/BatemanMOMAAABB21,
author = {Alex Bateman and
Maria Jesus Martin and
Sandra E. Orchard and
Michele Magrane and
Rahat Agivetova and
Shadab Ahmad and
Emanuele Alpi and
Emily H. Bowler{-}Barnett and
Ramona Britto and
Borisas Bursteinas and
Hema Bye{-}A{-}Jee and
Ray Coetzee and
Austra Cukura and
Alan W. Sousa da Silva and
Paul Denny and
Tunca Dogan and
Thankgod Ebenezer and
Jun Fan and
Leyla Jael Garc{\'{\i}}a Castro and
Penelope Garmiri and
George E. Georghiou and
Leonardo Gonzales and
Emma Hatton{-}Ellis and
Abdulrahman Hussein and
Alexandr Ignatchenko and
Giuseppe Insana and
Rizwan Ishtiaq and
Petteri Jokinen and
Vishal Joshi and
Dushyanth Jyothi and
Antonia Lock and
Rodrigo Lopez and
Aurelien Luciani and
Jie Luo and
Yvonne Lussi and
Alistair MacDougall and
F{\'{a}}bio Madeira and
Mahdi Mahmoudy and
Manuela Menchi and
Alok Mishra and
Katie Moulang and
Andrew Nightingale and
Carla Susana Oliveira and
Sangya Pundir and
Guoying Qi and
Shriya Raj and
Daniel Rice and
Milagros Rodr{\'{\i}}guez{-}L{\'{o}}pez and
Rabie Saidi and
Joseph Sampson and
Tony Sawford and
Elena Speretta and
Edward Turner and
Nidhi Tyagi and
Preethi Vasudev and
Vladimir Volynkin and
Kate Warner and
Xavier Watkins and
Rossana Zaru and
Hermann Zellner and
Alan J. Bridge and
Sylvain Poux and
Nicole Redaschi and
Lucila Aimo and
Ghislaine Argoud{-}Puy and
Andrea H. Auchincloss and
Kristian B. Axelsen and
Parit Bansal and
Delphine Baratin and
Marie{-}Claude Blatter and
Jerven T. Bolleman and
Emmanuel Boutet and
Lionel Breuza and
Cristina Casals{-}Casas and
Edouard De Castro and
Kamal Chikh Echioukh and
Elisabeth Coudert and
B{\'{e}}atrice A. Cuche and
Mikael Doche and
Dolnide Dornevil and
Anne Estreicher and
Maria Livia Famiglietti and
Marc Feuermann and
Elisabeth Gasteiger and
Sebastien Gehant and
Vivienne Baillie Gerritsen and
Arnaud Gos and
Nadine Gruaz{-}Gumowski and
Ursula Hinz and
Chantal Hulo and
Nevila Hyka{-}Nouspikel and
Florence Jungo and
Guillaume Keller and
Arnaud Kerhornou and
Vicente Lara and
Philippe Le Mercier and
Damien Lieberherr and
Thierry Lombardot and
Xavier Martin and
Patrick Masson and
Anne Morgat and
Teresa Batista Neto and
Salvo Paesano and
Ivo Pedruzzi and
Sandrine Pilbout and
Lucille Pourcel and
Monica Pozzato and
Manuela Pruess and
Catherine Rivoire and
Christian J. A. Sigrist and
Karin Sonesson and
Andre Stutz and
Shyamala Sundaram and
Michael Tognolli and
Laure Verbregue and
Cathy H. Wu and
Cecilia N. Arighi and
Leslie Arminski and
Chuming Chen and
Yongxing Chen and
John S. Garavelli and
Hongzhan Huang and
Kati Laiho and
Peter B. McGarvey and
Darren A. Natale and
Karen Ross and
C. R. Vinayaka and
Qinghua Wang and
Yuqi Wang and
Lai{-}Su Yeh and
Jian Zhang and
Patrick Ruch and
Douglas Teodoro},
title = {UniProt: the universal protein knowledgebase in 2021},
journal = {Nucleic Acids Res.},
volume = {49},
number = {Database-Issue},
pages = {D480--D489},
year = {2021},
url = {https://doi.org/10.1093/nar/gkaa1100},
doi = {10.1093/NAR/GKAA1100},
timestamp = {Fri, 15 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/BatemanMOMAAABB21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MitchellABBBBBC19,
author = {Alex L. Mitchell and
Teresa K. Attwood and
Patricia C. Babbitt and
Matthias Blum and
Peer Bork and
Alan J. Bridge and
Shoshana D. Brown and
Hsin{-}Yu Chang and
Sara El{-}Gebali and
Matthew Fraser and
Julian Gough and
David Haft and
Hongzhan Huang and
Ivica Letunic and
Rodrigo Lopez and
Aurelien Luciani and
F{\'{a}}bio Madeira and
Aron Marchler{-}Bauer and
Huaiyu Mi and
Darren A. Natale and
Marco Necci and
Gift Nuka and
Christine A. Orengo and
Arun Prasad Pandurangan and
Typhaine Paysan{-}Lafosse and
Sebastien Pesseat and
Simon C. Potter and
Matloob Qureshi and
Neil D. Rawlings and
Nicole Redaschi and
Lorna J. Richardson and
Catherine Rivoire and
Gustavo A. Salazar and
Amaia Sangrador{-}Vegas and
Christian J. A. Sigrist and
Ian Sillitoe and
Granger G. Sutton and
Narmada Thanki and
Paul D. Thomas and
Silvio C. E. Tosatto and
Siew{-}Yit Yong and
Robert D. Finn},
title = {InterPro in 2019: improving coverage, classification and access to
protein sequence annotations},
journal = {Nucleic Acids Res.},
volume = {47},
number = {Database-Issue},
pages = {D351--D360},
year = {2019},
url = {https://doi.org/10.1093/nar/gky1100},
doi = {10.1093/NAR/GKY1100},
timestamp = {Fri, 15 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/MitchellABBBBBC19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/fpl/BrunetSGIBKSLXB18,
author = {Simone Casale Brunet and
Thierry Sch{\"{u}}pbach and
Nicolas Guex and
Christian Iseli and
Alan J. Bridge and
Dmitry Kuznetsov and
Christian J. A. Sigrist and
Phillippe Lemercier and
Ioannis Xenarios and
Endri Bezati},
title = {Towards in the Field Fast Pathogens Detection Using FPGAs},
booktitle = {28th International Conference on Field Programmable Logic and Applications,
{FPL} 2018, Dublin, Ireland, August 27-31, 2018},
pages = {463--464},
publisher = {{IEEE} Computer Society},
year = {2018},
url = {https://doi.org/10.1109/FPL.2018.00091},
doi = {10.1109/FPL.2018.00091},
timestamp = {Fri, 15 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/fpl/BrunetSGIBKSLXB18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/FinnABBBBCDEFGH17,
author = {Robert D. Finn and
Teresa K. Attwood and
Patricia C. Babbitt and
Alex Bateman and
Peer Bork and
Alan J. Bridge and
Hsin{-}Yu Chang and
Zsuzsanna Doszt{\'{a}}nyi and
Sara El{-}Gebali and
Matthew Fraser and
Julian Gough and
David Haft and
Gemma L. Holliday and
Hongzhan Huang and
Xiaosong Huang and
Ivica Letunic and
Rodrigo Lopez and
Shennan Lu and
Aron Marchler{-}Bauer and
Huaiyu Mi and
Jaina Mistry and
Darren A. Natale and
Marco Necci and
Gift Nuka and
Christine A. Orengo and
Young Mi Park and
Sebastien Pesseat and
Damiano Piovesan and
Simon C. Potter and
Neil D. Rawlings and
Nicole Redaschi and
Lorna J. Richardson and
Catherine Rivoire and
Amaia Sangrador{-}Vegas and
Christian J. A. Sigrist and
Ian Sillitoe and
Ben Smithers and
Silvano Squizzato and
Granger G. Sutton and
Narmada Thanki and
Paul D. Thomas and
Silvio C. E. Tosatto and
Cathy H. Wu and
Ioannis Xenarios and
Lai{-}Su L. Yeh and
Siew{-}Yit Yong and
Alex L. Mitchell},
title = {InterPro in 2017 - beyond protein family and domain annotations},
journal = {Nucleic Acids Res.},
volume = {45},
number = {Database-Issue},
pages = {D190--D199},
year = {2017},
url = {https://doi.org/10.1093/nar/gkw1107},
doi = {10.1093/NAR/GKW1107},
timestamp = {Fri, 15 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/FinnABBBBCDEFGH17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MitchellCDFHLMMNPSSRYBPASRRXKGBLGOHHNWOSMTF15,
author = {Alex L. Mitchell and
Hsin{-}Yu Chang and
Louise C. Daugherty and
Matthew Fraser and
Sarah Hunter and
Rodrigo Lopez and
Craig McAnulla and
Conor McMenamin and
Gift Nuka and
Sebastien Pesseat and
Amaia Sangrador{-}Vegas and
Maxim Scheremetjew and
Claudia Rato and
Siew{-}Yit Yong and
Alex Bateman and
Marco Punta and
Teresa K. Attwood and
Christian J. A. Sigrist and
Nicole Redaschi and
Catherine Rivoire and
Ioannis Xenarios and
Daniel Kahn and
Dominique Guyot and
Peer Bork and
Ivica Letunic and
Julian Gough and
Matt E. Oates and
Daniel H. Haft and
Hongzhan Huang and
Darren A. Natale and
Cathy H. Wu and
Christine A. Orengo and
Ian Sillitoe and
Huaiyu Mi and
Paul D. Thomas and
Robert D. Finn},
title = {The InterPro protein families database: the classification resource
after 15 years},
journal = {Nucleic Acids Res.},
volume = {43},
number = {Database-Issue},
pages = {213--221},
year = {2015},
url = {https://doi.org/10.1093/nar/gku1243},
doi = {10.1093/NAR/GKU1243},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MitchellCDFHLMMNPSSRYBPASRRXKGBLGOHHNWOSMTF15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SigristCCCHBBX13,
author = {Christian J. A. Sigrist and
Edouard De Castro and
Lorenzo Cerutti and
B{\'{e}}atrice A. Cuche and
Nicolas Hulo and
Alan J. Bridge and
Lydie Bougueleret and
Ioannis Xenarios},
title = {New and continuing developments at {PROSITE}},
journal = {Nucleic Acids Res.},
volume = {41},
number = {Database-Issue},
pages = {344--347},
year = {2013},
url = {https://doi.org/10.1093/nar/gks1067},
doi = {10.1093/NAR/GKS1067},
timestamp = {Fri, 15 Mar 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/SigristCCCHBBX13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HunterJM12,
author = {Sarah Hunter and
Philip Jones and
Alex L. Mitchell and
Rolf Apweiler and
Teresa K. Attwood and
Alex Bateman and
Thomas Bernard and
David Binns and
Peer Bork and
Sarah W. Burge and
Edouard De Castro and
Penny C. Coggill and
Matthew Corbett and
Ujjwal Das and
Louise C. Daugherty and
Lauranne Duquenne and
Robert D. Finn and
Matthew Fraser and
Julian Gough and
Daniel H. Haft and
Nicolas Hulo and
Daniel Kahn and
Elizabeth Kelly and
Ivica Letunic and
David Lonsdale and
Rodrigo Lopez and
Martin Madera and
John Maslen and
Craig McAnulla and
Jennifer McDowall and
Conor McMenamin and
Huaiyu Mi and
Prudence Mutowo{-}Meullenet and
Nicola J. Mulder and
Darren A. Natale and
Christine A. Orengo and
Sebastien Pesseat and
Marco Punta and
Antony F. Quinn and
Catherine Rivoire and
Amaia Sangrador{-}Vegas and
Jeremy D. Selengut and
Christian J. A. Sigrist and
Maxim Scheremetjew and
John G. Tate and
Manjulapramila Thimmajanarthanan and
Paul D. Thomas and
Cathy H. Wu and
Corin Yeats and
Siew{-}Yit Yong},
title = {InterPro in 2011: new developments in the family and domain prediction
database},
journal = {Nucleic Acids Res.},
volume = {40},
number = {Database-Issue},
pages = {306--312},
year = {2012},
url = {https://doi.org/10.1093/nar/gkr948},
doi = {10.1093/NAR/GKR948},
timestamp = {Sun, 02 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/HunterJM12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/SigristCCLBBH10,
author = {Christian J. A. Sigrist and
Lorenzo Cerutti and
Edouard De Castro and
Petra S. Langendijk{-}Genevaux and
Virginie Bulliard and
Amos Bairoch and
Nicolas Hulo},
title = {PROSITE, a protein domain database for functional characterization
and annotation},
journal = {Nucleic Acids Res.},
volume = {38},
number = {Database-Issue},
pages = {161--166},
year = {2010},
url = {https://doi.org/10.1093/nar/gkp885},
doi = {10.1093/NAR/GKP885},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/SigristCCLBBH10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HunterAABBBBDDDFGHHKKLLLLMMMMMMMNOQSSTTVWWY09,
author = {Sarah Hunter and
Rolf Apweiler and
Teresa K. Attwood and
Amos Bairoch and
Alex Bateman and
David Binns and
Peer Bork and
Ujjwal Das and
Louise C. Daugherty and
Lauranne Duquenne and
Robert D. Finn and
Julian Gough and
Daniel H. Haft and
Nicolas Hulo and
Daniel Kahn and
Elizabeth Kelly and
Aur{\'{e}}lie Laugraud and
Ivica Letunic and
David Lonsdale and
Rodrigo Lopez and
Martin Madera and
John Maslen and
Craig McAnulla and
Jennifer McDowall and
Jaina Mistry and
Alex L. Mitchell and
Nicola J. Mulder and
Darren A. Natale and
Christine A. Orengo and
Antony F. Quinn and
Jeremy D. Selengut and
Christian J. A. Sigrist and
Manjula Thimma and
Paul D. Thomas and
Franck Valentin and
Derek Wilson and
Cathy H. Wu and
Corin Yeats},
title = {InterPro: the integrative protein signature database},
journal = {Nucleic Acids Res.},
volume = {37},
number = {Database-Issue},
pages = {211--215},
year = {2009},
url = {https://doi.org/10.1093/nar/gkn785},
doi = {10.1093/NAR/GKN785},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/HunterAABBBBDDDFGHHKKLLLLMMMMMMMNOQSSTTVWWY09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/KouaCFSTHD09,
author = {Dominique Koua and
Lorenzo Cerutti and
Laurent Falquet and
Christian J. A. Sigrist and
Gr{\'{e}}gory Theiler and
Nicolas Hulo and
Christophe Dunand},
title = {PeroxiBase: a database with new tools for peroxidase family classification},
journal = {Nucleic Acids Res.},
volume = {37},
number = {Database-Issue},
pages = {261--266},
year = {2009},
url = {https://doi.org/10.1093/nar/gkn680},
doi = {10.1093/NAR/GKN680},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/KouaCFSTHD09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HuloBBCCCLLS08,
author = {Nicolas Hulo and
Amos Bairoch and
Virginie Bulliard and
Lorenzo Cerutti and
B{\'{e}}atrice A. Cuche and
Edouard De Castro and
Corinne Lachaize and
Petra S. Langendijk{-}Genevaux and
Christian J. A. Sigrist},
title = {The 20 years of {PROSITE}},
journal = {Nucleic Acids Res.},
volume = {36},
number = {Database-Issue},
pages = {245--249},
year = {2008},
url = {https://doi.org/10.1093/nar/gkm977},
doi = {10.1093/NAR/GKM977},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/HuloBBCCCLLS08.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MulderAA07,
author = {Nicola J. Mulder and
Rolf Apweiler and
Teresa K. Attwood and
Amos Bairoch and
Alex Bateman and
David Binns and
Peer Bork and
Virginie Buillard and
Lorenzo Cerutti and
Richard R. Copley and
Emmanuel Courcelle and
Ujjwal Das and
Louise C. Daugherty and
Mark Dibley and
Robert D. Finn and
Wolfgang Fleischmann and
Julian Gough and
Daniel H. Haft and
Nicolas Hulo and
Sarah Hunter and
Daniel Kahn and
Alexander Kanapin and
Anish Kejariwal and
Alberto Labarga and
Petra S. Langendijk{-}Genevaux and
David Lonsdale and
Rodrigo Lopez and
Ivica Letunic and
Martin Madera and
John Maslen and
Craig McAnulla and
Jennifer McDowall and
Jaina Mistry and
Alex L. Mitchell and
Anastasia N. Nikolskaya and
Sandra E. Orchard and
Christine A. Orengo and
Robert Petryszak and
Jeremy D. Selengut and
Christian J. A. Sigrist and
Paul D. Thomas and
Franck Valentin and
Derek Wilson and
Cathy H. Wu and
Corin Yeats},
title = {New developments in the InterPro database},
journal = {Nucleic Acids Res.},
volume = {35},
number = {Database-Issue},
pages = {224--228},
year = {2007},
url = {https://doi.org/10.1093/nar/gkl841},
doi = {10.1093/NAR/GKL841},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MulderAA07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HuloBBCCLPS06,
author = {Nicolas Hulo and
Amos Bairoch and
Virginie Bulliard and
Lorenzo Cerutti and
Edouard De Castro and
Petra S. Langendijk{-}Genevaux and
Marco Pagni and
Christian J. A. Sigrist},
title = {The {PROSITE} database},
journal = {Nucleic Acids Res.},
volume = {34},
number = {Database-Issue},
pages = {227--230},
year = {2006},
url = {https://doi.org/10.1093/nar/gkj063},
doi = {10.1093/NAR/GKJ063},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/HuloBBCCLPS06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/CastroSGBLGBH06,
author = {Edouard De Castro and
Christian J. A. Sigrist and
Alexandre Gattiker and
Virginie Bulliard and
Petra S. Langendijk{-}Genevaux and
Elisabeth Gasteiger and
Amos Bairoch and
Nicolas Hulo},
title = {ScanProsite: detection of {PROSITE} signature matches and ProRule-associated
functional and structural residues in proteins},
journal = {Nucleic Acids Res.},
volume = {34},
number = {Web-Server-Issue},
pages = {362--365},
year = {2006},
url = {https://doi.org/10.1093/nar/gkl124},
doi = {10.1093/NAR/GKL124},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/CastroSGBLGBH06.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SigristCLSBH05,
author = {Christian J. A. Sigrist and
Edouard De Castro and
Petra S. Langendijk{-}Genevaux and
Virginie Le Saux and
Amos Bairoch and
Nicolas Hulo},
title = {ProRule: a new database containing functional and structural information
on {PROSITE} profiles},
journal = {Bioinform.},
volume = {21},
number = {21},
pages = {4060--4066},
year = {2005},
url = {https://doi.org/10.1093/bioinformatics/bti614},
doi = {10.1093/BIOINFORMATICS/BTI614},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/SigristCLSBH05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MulderAABBBBBBCCCDDFGHHHKKKLLLMMMMNOPPQSSSSVW05,
author = {Nicola J. Mulder and
Rolf Apweiler and
Teresa K. Attwood and
Amos Bairoch and
Alex Bateman and
David Binns and
Paul Bradley and
Peer Bork and
Phillip Bucher and
Lorenzo Cerutti and
Richard R. Copley and
Emmanuel Courcelle and
Ujjwal Das and
Richard Durbin and
Wolfgang Fleischmann and
Julian Gough and
Daniel H. Haft and
Nicola Harte and
Nicolas Hulo and
Daniel Kahn and
Alexander Kanapin and
Maria Krestyaninova and
David Lonsdale and
Rodrigo Lopez and
Ivica Letunic and
Martin Madera and
John Maslen and
Jennifer McDowall and
Alex L. Mitchell and
Anastasia N. Nikolskaya and
Sandra E. Orchard and
Marco Pagni and
Chris P. Ponting and
Emmanuel Quevillon and
Jeremy D. Selengut and
Christian J. A. Sigrist and
Ville Silventoinen and
David J. Studholme and
Robert Vaughan and
Cathy H. Wu},
title = {InterPro, progress and status in 2005},
journal = {Nucleic Acids Res.},
volume = {33},
number = {Database-Issue},
pages = {201--205},
year = {2005},
url = {https://doi.org/10.1093/nar/gki106},
doi = {10.1093/NAR/GKI106},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/MulderAABBBBBBCCCDDFGHHHKKKLLLMMMMNOPPQSSSSVW05.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/HuloSSLBGCBB04,
author = {Nicolas Hulo and
Christian J. A. Sigrist and
Virginie Le Saux and
Petra S. Langendijk{-}Genevaux and
Lorenza Bordoli and
Alexandre Gattiker and
Edouard De Castro and
Philipp Bucher and
Amos Bairoch},
title = {Recent improvements to the {PROSITE} database},
journal = {Nucleic Acids Res.},
volume = {32},
number = {Database-Issue},
pages = {134--137},
year = {2004},
url = {https://doi.org/10.1093/nar/gkh044},
doi = {10.1093/NAR/GKH044},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/HuloSSLBGCBB04.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/candc/GattikerMRACLKPSa03,
author = {Alexandre Gattiker and
Karine Michoud and
Catherine Rivoire and
Andrea H. Auchincloss and
Elisabeth Coudert and
Tania Lima and
Paul J. Kersey and
Marco Pagni and
Christian J. A. Sigrist and
Corinne Lachaize and
Anne{-}Lise Veuthey and
Elisabeth Gasteiger and
Amos Bairoch},
title = {Automated annotation of microbial proteomes in {SWISS-PROT}},
journal = {Comput. Biol. Chem.},
volume = {27},
number = {1},
pages = {49--58},
year = {2003},
url = {https://doi.org/10.1016/S1476-9271(02)00094-4},
doi = {10.1016/S1476-9271(02)00094-4},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/candc/GattikerMRACLKPSa03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/MulderAABBBBBBBBCCDDFFGHHHKKKLLLSOPPPSSSVZ03,
author = {Nicola J. Mulder and
Rolf Apweiler and
Terri K. Attwood and
Amos Bairoch and
Daniel Barrell and
Alex Bateman and
David Binns and
Margaret Biswas and
Paul Bradley and
Peer Bork and
Philipp Bucher and
Richard R. Copley and
Emmanuel Courcelle and
Ujjwal Das and
Richard Durbin and
Laurent Falquet and
Wolfgang Fleischmann and
Sam Griffiths{-}Jones and
Daniel H. Haft and
Nicola Harte and
Nicolas Hulo and
Daniel Kahn and
Alexander Kanapin and
Maria Krestyaninova and
Rodrigo Lopez and
Ivica Letunic and
David Lonsdale and
Ville Silventoinen and
Sandra E. Orchard and
Marco Pagni and
David Peyruc and
Chris P. Ponting and
Jeremy D. Selengut and
Florence Servant and
Christian J. A. Sigrist and
Robert Vaughan and
Evgeni M. Zdobnov},
title = {The InterPro Database, 2003 brings increased coverage and new features},
journal = {Nucleic Acids Res.},
volume = {31},
number = {1},
pages = {315--318},
year = {2003},
url = {https://doi.org/10.1093/nar/gkg046},
doi = {10.1093/NAR/GKG046},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/MulderAABBBBBBBBCCDDFFGHHHKKKLLLSOPPPSSSVZ03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/MulderAABBBBBBBCCDFFGGHHHKKKLLOPPPSS02,
author = {Nicola J. Mulder and
Rolf Apweiler and
Terri K. Attwood and
Amos Bairoch and
Alex Bateman and
David Binns and
Margaret Biswas and
Paul Bradley and
Peer Bork and
Philipp Bucher and
Richard R. Copley and
Emmanuel Courcelle and
Richard Durbin and
Laurent Falquet and
Wolfgang Fleischmann and
J{\'{e}}r{\^{o}}me Gouzy and
Sam Griffiths{-}Jones and
Daniel H. Haft and
Henning Hermjakob and
Nicolas Hulo and
Daniel Kahn and
Alexander Kanapin and
Maria Krestyaninova and
Rodrigo Lopez and
Ivica Letunic and
Sue Orchard and
Marco Pagni and
David Peyruc and
Chris P. Ponting and
Florence Servant and
Christian J. A. Sigrist},
title = {InterPro: An Integrated Documentation Resource for Protein Families,
Domains and Functional Sites},
journal = {Briefings Bioinform.},
volume = {3},
number = {3},
pages = {225--235},
year = {2002},
url = {https://doi.org/10.1093/bib/3.3.225},
doi = {10.1093/BIB/3.3.225},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/MulderAABBBBBBBCCDFFGGHHHKKKLLOPPPSS02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/SigristCHGFPBB02,
author = {Christian J. A. Sigrist and
Lorenzo Cerutti and
Nicolas Hulo and
Alexandre Gattiker and
Laurent Falquet and
Marco Pagni and
Amos Bairoch and
Philipp Bucher},
title = {{PROSITE:} {A} Documented Database Using Patterns and Profiles as
Motif Descriptors},
journal = {Briefings Bioinform.},
volume = {3},
number = {3},
pages = {265--274},
year = {2002},
url = {https://doi.org/10.1093/bib/3.3.265},
doi = {10.1093/BIB/3.3.265},
timestamp = {Mon, 26 Oct 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bib/SigristCHGFPBB02.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/FalquetPBHSHB03,
author = {Laurent Falquet and
Marco Pagni and
Philipp Bucher and
Nicolas Hulo and
Christian J. A. Sigrist and
Kay Hofmann and
Amos Bairoch},
title = {The {PROSITE} database, its status in 2002},
journal = {Nucleic Acids Res.},
volume = {30},
number = {1},
pages = {235--238},
year = {2002},
url = {https://doi.org/10.1093/nar/30.1.235},
doi = {10.1093/NAR/30.1.235},
timestamp = {Sat, 30 Sep 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/nar/FalquetPBHSHB03.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/nar/ApweilerABBBBBCCCDFFGHHJKKKLMMOPSSZ01,
author = {Rolf Apweiler and
Terri K. Attwood and
Amos Bairoch and
Alex Bateman and
Ewan Birney and
Margaret Biswas and
Philipp Bucher and
Lorenzo Cerutti and
Florence Corpet and
Michael D. R. Croning and
Richard Durbin and
Laurent Falquet and
Wolfgang Fleischmann and
J{\'{e}}r{\^{o}}me Gouzy and
Henning Hermjakob and
Nicolas Hulo and
Inge Jonassen and
Daniel Kahn and
Alexander Kanapin and
Youla Karavidopoulou and
Rodrigo Lopez and
Beate Marx and
Nicola J. Mulder and
Thomas M. Oinn and
Marco Pagni and
Florence Servant and
Christian J. A. Sigrist and
Evgeni M. Zdobnov},
title = {The InterPro database, an integrated documentation resource for protein
families, domains and functional sites},
journal = {Nucleic Acids Res.},
volume = {29},
number = {1},
pages = {37--40},
year = {2001},
url = {https://doi.org/10.1093/nar/29.1.37},
doi = {10.1093/NAR/29.1.37},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/nar/ApweilerABBBBBCCCDFFGHHJKKKLMMOPSSZ01.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/ApweilerABBBBBCCCDFFGHHJKKKLMMOPSSZ00,
author = {Rolf Apweiler and
Terri K. Attwood and
Amos Bairoch and
Alex Bateman and
Ewan Birney and
Margaret Biswas and
Philipp Bucher and
Lorenzo Cerutti and
Florence Corpet and
Michael D. R. Croning and
Richard Durbin and
Laurent Falquet and
Wolfgang Fleischmann and
J{\'{e}}r{\^{o}}me Gouzy and
Henning Hermjakob and
Nicolas Hulo and
Inge Jonassen and
Daniel Kahn and
Alexander Kanapin and
Youla Karavidopoulou and
Rodrigo Lopez and
Beate Marx and
Nicola J. Mulder and
Thomas M. Oinn and
Marco Pagni and
Florence Servant and
Christian J. A. Sigrist and
Evgeni M. Zdobnov},
title = {InterPro-an integrated documentation resource for protein families,
domains and functional sites},
journal = {Bioinform.},
volume = {16},
number = {12},
pages = {1145--1150},
year = {2000},
url = {https://doi.org/10.1093/bioinformatics/16.12.1145},
doi = {10.1093/BIOINFORMATICS/16.12.1145},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/ApweilerABBBBBCCCDFFGHHJKKKLMMOPSSZ00.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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