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Arkadiusz Gertych
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Publications
- 2023
- [j25]Karolina Nurzynska, Dalin Li, Ann E. Walts, Arkadiusz Gertych:
Multilayer outperforms single-layer slide scanning in AI-based classification of whole slide images with low-burden acid-fast mycobacteria (AFB). Comput. Methods Programs Biomed. 234: 107518 (2023) - 2022
- [j24]Mariusz Marzec, Adam Piórkowski, Arkadiusz Gertych:
Efficient automatic 3D segmentation of cell nuclei for high-content screening. BMC Bioinform. 23(1): 203 (2022) - 2021
- [j23]Jaime Gallego, Zaneta Swiderska-Chadaj, Tomasz Markiewicz, Michifumi Yamashita, M. Alejandra Gabaldon, Arkadiusz Gertych:
A U-Net based framework to quantify glomerulosclerosis in digitized PAS and H&E stained human tissues. Comput. Medical Imaging Graph. 89: 101865 (2021) - 2020
- [j21]Mu Yang, Karolina Nurzynska, Ann E. Walts, Arkadiusz Gertych:
A CNN-based active learning framework to identify mycobacteria in digitized Ziehl-Neelsen stained human tissues. Comput. Medical Imaging Graph. 84: 101752 (2020) - [c13]Zaneta Swiderska-Chadaj, Karolina Nurzynska, Bartlomiej Grala, Katrien Grunberg, Lieke van der Woude, Monika Looijen-Salamon, Ann E. Walts, Tomasz Markiewicz, Francesco Ciompi, Arkadiusz Gertych:
A deep learning approach to assess the predominant tumor growth pattern in whole-slide images of lung adenocarcinoma. Medical Imaging: Digital Pathology 2020: 113200D - 2019
- [j20]Wenyuan Li, Jiayun Li, Karthik V. Sarma, King Chung Ho, Shiwen Shen, Beatrice S. Knudsen, Arkadiusz Gertych, Corey W. Arnold:
Path R-CNN for Prostate Cancer Diagnosis and Gleason Grading of Histological Images. IEEE Trans. Medical Imaging 38(4): 945-954 (2019) - [c12]Zaneta Swiderska-Chadaj, Zhaoxuan Ma, Nathan Ing, Tomasz Markiewicz, Malgorzata Lorent, Szczepan Cierniak, Ann E. Walts, Beatrice S. Knudsen, Arkadiusz Gertych:
Contextual Classification of Tumor Growth Patterns in Digital Histology Slides. ITIB 2019: 13-25 - [i1]Jiayun Li, Wenyuan Li, Arkadiusz Gertych, Beatrice S. Knudsen, William Speier, Corey W. Arnold:
An attention-based multi-resolution model for prostate whole slide imageclassification and localization. CoRR abs/1905.13208 (2019) - 2018
- [j15]Jiayun Li, William Speier, King Chung Ho, Karthik V. Sarma, Arkadiusz Gertych, Beatrice S. Knudsen, Corey W. Arnold:
An EM-based semi-supervised deep learning approach for semantic segmentation of histopathological images from radical prostatectomies. Comput. Medical Imaging Graph. 69: 125-133 (2018) - [c11]Zhaoxuan Ma, Zaneta Swiderska-Chadaj, Nathan Ing, Hootan Salemi, Dermot McGovern, Beatrice S. Knudsen, Arkadiusz Gertych:
Semantic Segmentation of Colon Glands in Inflammatory Bowel Disease Biopsies. ITIB 2018: 379-392 - [c10]Adam Piórkowski, Arkadiusz Gertych:
Color Normalization Approach to Adjust Nuclei Segmentation in Images of Hematoxylin and Eosin Stained Tissue. ITIB 2018: 393-406 - [c9]Nathan Ing, Zhaoxuan Ma, Jiayun Li, Hootan Salemi, Corey W. Arnold, Beatrice S. Knudsen, Arkadiusz Gertych:
Semantic segmentation for prostate cancer grading by convolutional neural networks. Medical Imaging: Digital Pathology 2018: 105811B - 2017
- [c8]Jiayun Li, Karthik V. Sarma, King Chung Ho, Arkadiusz Gertych, Beatrice S. Knudsen, Corey W. Arnold:
A Multi-scale U-Net for Semantic Segmentation of Histological Images from Radical Prostatectomies. AMIA 2017 - [c7]Zaneta Swiderska-Chadaj, Tomasz Markiewicz, Bartlomiej Grala, Malgorzata Lorent, Arkadiusz Gertych:
A Deep Learning Pipeline to Delineate Proliferative Areas of Intracranial Tumors in Digital Slides. MIUA 2017: 448-458 - 2016
- [j9]Arkadiusz Gertych, Zhaoxuan Ma, Jian Tajbakhsh, Adriana Velásquez-Vacca, Beatrice S. Knudsen:
Rapid 3-D delineation of cell nuclei for high-content screening platforms. Comput. Biol. Medicine 69: 328-338 (2016) - [c6]Nathan Ing, Sadri Salman, Zhaoxuan Ma, Ann E. Walts, Beatrice S. Knudsen, Arkadiusz Gertych:
Machine Learning Can Reliably Distinguish Histological Patterns of Micropapillary and Solid Lung Adenocarcinomas. ITIB (2) 2016: 193-206 - 2015
- [j8]Arkadiusz Gertych, Nathan Ing, Zhaoxuan Ma, Thomas J. Fuchs, Sadri Salman, Sambit Mohanty, Sanica Bhele, Adriana Velásquez-Vacca, Mahul B. Amin, Beatrice S. Knudsen:
Machine learning approaches to analyze histological images of tissues from radical prostatectomies. Comput. Medical Imaging Graph. 46: 197-208 (2015)
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