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Shaoliang Peng
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Publications
- 2023
- [c66]Deze Wang, Boxing Chen, Shanshan Li, Wei Luo, Shaoliang Peng, Wei Dong, Xiangke Liao:
One Adapter for All Programming Languages? Adapter Tuning for Code Search and Summarization. ICSE 2023: 5-16 - [c65]Teng Wang, Zhouyang Jia, Shanshan Li, Si Zheng, Yue Yu, Erci Xu, Shaoliang Peng, Xiangke Liao:
Understanding and Detecting On-The-Fly Configuration Bugs. ICSE 2023: 628-639 - [i12]Deze Wang, Boxing Chen, Shanshan Li, Wei Luo, Shaoliang Peng, Wei Dong, Xiangke Liao:
One Adapter for All Programming Languages? Adapter Tuning for Code Search and Summarization. CoRR abs/2303.15822 (2023) - 2022
- [j43]Zihang Wang, Yingbo Cui, Shaoliang Peng, Xiangke Liao, Yangbo Yu:
MinimapR: A parallel alignment tool for the analysis of large-scale third-generation sequencing data. Comput. Biol. Chem. 99: 107735 (2022) - 2021
- [j36]Yingbo Cui, Zihang Wang, Johannes Köster, Xiangke Liao, Shaoliang Peng, Tao Tang, Chun Huang, Canqun Yang:
VISPR-online: a web-based interactive tool to visualize CRISPR screening experiments. BMC Bioinform. 22(1): 344 (2021) - [j31]Shaoliang Peng, Yaning Yang, Wei Liu, Fei Li, Xiangke Liao:
Discriminant Projection Shared Dictionary Learning for Classification of Tumors Using Gene Expression Data. IEEE ACM Trans. Comput. Biol. Bioinform. 18(4): 1464-1473 (2021) - 2020
- [j26]Shaoliang Peng, Xiaoyu Zhang, Wenhe Su, Dong Dong, Yutong Lu, Xiangke Liao, Kai Lu, Canqun Yang, Jie Liu, Weiliang Zhu, Dongqing Wei:
High-Scalable Collaborated Parallel Framework for Large-Scale Molecular Dynamic Simulation on Tianhe-2 Supercomputer. IEEE ACM Trans. Comput. Biol. Bioinform. 17(3): 804-816 (2020) - 2018
- [j19]Shunyun Yang, Runxin Guo, Rui Liu, Xiangke Liao, Quan Zou, Benyun Shi, Shaoliang Peng:
cmFSM: a scalable CPU-MIC coordinated drug-finding tool by frequent subgraph mining. BMC Bioinform. 19-S(4): 35-47 (2018) - [j18]Shaoliang Peng, Minxia Cheng, Kaiwen Huang, Yingbo Cui, Zhiqiang Zhang, Runxin Guo, Xiaoyu Zhang, Shunyun Yang, Xiangke Liao, Yutong Lu, Quan Zou, Benyun Shi:
Efficient computation of motif discovery on Intel Many Integrated Core (MIC) Architecture. BMC Bioinform. 19-S(9): 185-194 (2018) - [j17]Yingbo Cui, Shaoliang Peng, Yutong Lu, Xiaoqian Zhu, Bingqiang Wang, Chengkun Wu, Xiangke Liao:
mSNP: A Massively Parallel Algorithm for Large-Scale SNP Detection. IEEE Trans. Parallel Distributed Syst. 29(11): 2557-2567 (2018) - [j16]Shanshan Li, Wang Li, Xiangke Liao, Shaoliang Peng, Shulin Zhou, Zhouyang Jia, Teng Wang:
ConfVD: System Reactions Analysis and Evaluation Through Misconfiguration Injection. IEEE Trans. Reliab. 67(4): 1393-1405 (2018) - 2017
- [j15]Shaoliang Peng, Shunyun Yang, Ming Gao, Xiangke Liao, Jie Liu, Canqun Yang, Chengkun Wu, Wenqiang Yu:
P-Hint-Hunt: a deep parallelized whole genome DNA methylation detection tool. BMC Genom. 18(S2) (2017) - [j14]Wenhe Su, Xiangke Liao, Yutong Lu, Quan Zou, Shaoliang Peng:
Multiple Sequence Alignment Based on a Suffix Tree and Center-Star Strategy: A Linear Method for Multiple Nucleotide Sequence Alignment on Spark Parallel Framework. J. Comput. Biol. 24(12): 1230-1242 (2017) - [c30]Xiaoyu Zhang, Xiangke Liao, Hao Zhu, Kenli Li, Benyun Shi, Shaoliang Peng:
A novel algorithm for detecting co-evolutionary domains in protein and nucleotide sequences. BIBM 2017: 56-61 - [c29]Shaoliang Peng, Xiaoyu Zhang, Shunyun Yang, Wenhe Su, Zhiqiang Zhang, Dong Dong, Kai Lu, Yutong Lu, Xiangke Liao, Bertil Schmidt, Weiliang Zhu, Kuan-Ching Li:
mD3DOCKxb: An Ultra-Scalable CPU-MIC Coordinated Virtual Screening Framework. CCGrid 2017: 671-676 - 2016
- [c27]Shaoliang Peng, Xiaoyu Zhang, Yutong Lu, Xiangke Liao, Kai Lu, Canqun Yang, Jie Liu, Weiliang Zhu, Dongqing Wei:
mAMBER: A CPU/MIC collaborated parallel framework for AMBER on Tianhe-2 supercomputer. BIBM 2016: 651-657 - 2015
- [j11]Jing Zhang, Shanshan Li, Xiangke Liao, Shaoliang Peng, Xiaodong Liu, Zhouyang Jia:
HeMatch: A redundancy layout placement scheme for erasure-coded storages in practical heterogeneous failure patterns. Sci. China Inf. Sci. 58(6): 1-11 (2015) - [j10]Ettore Murabito, Riccardo Colombo, Chengkun Wu, Malkhey Verma, Samrina Rehman, Jacky L. Snoep, Shaoliang Peng, Naiyang Guan, Xiangke Liao, Hans V. Westerhoff:
SupraBiology 2014: Promoting UK-China collaboration on Systems Biology and High Performance Computing. Quant. Biol. 3(1): 46-53 (2015) - [j9]Xiangke Liao, Shaoliang Peng, Yutong Lu, Yingbo Cui, Chengkun Wu, Heng Wang, Jiajun Wen:
Neo-hetergeneous Programming and Parallelized Optimization of a Human Genome Re-sequencing Analysis Software Pipeline on TH-2 Supercomputer. Supercomput. Front. Innov. 2(1): 73-83 (2015) - [c23]Shaoliang Peng, Xiangke Liao, Canqun Yang, Yutong Lu, Jie Liu, Yingbo Cui, Heng Wang, Chengkun Wu, Bingqiang Wang:
The Challenge of Scaling Genome Big Data Analysis Software on TH-2 Supercomputer. CCGRID 2015: 823-828 - [c22]Yingbo Cui, Xiangke Liao, Shaoliang Peng, Yutong Lu, Canqun Yang, Bingqiang Wang, Chengkun Wu:
Large-Scale Neo-Heterogeneous Programming and Optimization of SNP Detection on Tianhe-2. ISC 2015: 74-86 - 2014
- [j8]Xiaodong Liu, Mo Li, Shanshan Li, Shaoliang Peng, Xiangke Liao, Xiaopei Lu:
IMGPU: GPU-Accelerated Influence Maximization in Large-Scale Social Networks. IEEE Trans. Parallel Distributed Syst. 25(1): 136-145 (2014) - [j7]Xiaodong Liu, Shanshan Li, Xiangke Liao, Shaoliang Peng, Lei Wang, Zhiyin Kong:
Know by a handful the whole sack: efficient sampling for top-k influential user identification in large graphs. World Wide Web 17(4): 627-647 (2014) - [c20]Yingbo Cui, Xiangke Liao, Xiaoqian Zhu, Bingqiang Wang, Shaoliang Peng:
mBWA: A Massively Parallel Sequence Reads Aligner. PACBB 2014: 113-120 - 2013
- [c19]He Huang, Xiangke Liao, Shanshan Li, Shaoliang Peng, Xiaodong Liu, Bin Lin:
The architecture and traffic management of wireless collaborated hybrid data center network. SIGCOMM 2013: 511-512 - 2012
- [j5]Shaoliang Peng, Shanshan Li, Xiangke Liao, Yuxing Peng, Nong Xiao:
A scalable code dissemination protocol in heterogeneous wireless sensor networks. Sci. China Inf. Sci. 55(6): 1323-1336 (2012) - 2010
- [c15]Shanshan Li, Si Zheng, Xiangke Liao, Shaoliang Peng:
Exploring the practicability of mobile sensors in complex environment surveillance. IWQoS 2010: 1-2 - 2009
- [j3]Shaoliang Peng, Shanshan Li, Xiangke Liao, Yuxing Peng, Nong Xiao:
Estimation of a Population Size in Large-Scale Wireless Sensor Networks. J. Comput. Sci. Technol. 24(5): 987-997 (2009) - 2008
- [c10]Changxiang Shen, Wei-Fang Cheng, Xiangke Liao, Shaoliang Peng:
Barrier Coverage with Mobile Sensors. ISPAN 2008: 99-104 - [c9]Shanshan Li, Shaoliang Peng, Mo Li, Xiangke Liao:
Using cable-based mobile sensors to assist environment surveillance. MASS 2008: 521-522 - 2007
- [c7]Shanshan Li, Shaoliang Peng, Xiangke Liao, Peidong Zhu, Yuxing Peng:
A Framework for Congestion Control for Reliable Data Delivery in Wireless Sensor Networks. Integrated Network Management 2007: 793-796 - [c6]Shanshan Li, Xiangke Liao, Shaoliang Peng, Peidong Zhu, Jie Jiang:
Credit based Fairness Control in Wireless Sensor Network. SNPD (1) 2007: 817-822 - 2006
- [c4]Shanshan Li, Peidong Zhu, Xiangke Liao, Wei-Fang Cheng, Shaoliang Peng:
Energy Efficient Multipath Routing Using Network Coding in Wireless Sensor Networks. ADHOC-NOW 2006: 114-127 - [c3]Shaoliang Peng, Shanshan Li, Xiangke Liao, Yuxing Peng, Ye Hui:
Feedback Control with Prediction for Thread Allocation in Pipeline Architecture Web Server. ICDCN 2006: 454-465 - [c2]Xiangke Liao, Shanshan Li, Peidong Zhu, Shaoliang Peng, Wei-Fang Cheng, Dezun Dong:
Path Selection of Reliable Data Delivery in Wireless Sensor Networks. WASA 2006: 163-174 - [c1]Wei-Fang Cheng, Xiangke Liao, Changxiang Shen, Shanshan Li, Shaoliang Peng:
A Trust-Based Routing Framework in Energy-Constrained Wireless Sensor Networks. WASA 2006: 478-489
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