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Brett R. South
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Publications
- 2019
- [j13]Mike Conway, Salomeh Keyhani, Lee M. Christensen, Brett R. South, Marzieh Vali, Louise C. Walter, Danielle L. Mowery, Samir E. AbdelRahman, Wendy W. Chapman:
Moonstone: a novel natural language processing system for inferring social risk from clinical narratives. J. Biomed. Semant. 10(1): 6:1-6:10 (2019) - 2018
- [c30]Danielle L. Mowery, Luke Martin, Brett R. South, Ellen Morrow, William Peche, Eric Wiesner, Wendy W. Chapman, Benjamin S. Brooke:
Detecting Current Episodes of Cholecystitis-related Pain from Veterans Affairs Clinical Notes using Natural Language Processing. AMIA 2018 - [c29]Ruth M. Reeves, Brett R. South, Glenn T. Gobbel, Lee M. Christensen, Paul Thompson, Wendy W. Chapman, Michael E. Matheny, Jeremiah R. Brown:
Annotating Social Determinants of Health and Functional Status Information Using Publicly Accessible Corpora. AMIA 2018 - 2017
- [c26]Brett R. South, Lee M. Christensen, Danielle L. Mowery, Melissa Castine, Marzieh Vali, Marjorie Carter, Mike Conway, Adi V. Gundlapalli, Wendy W. Chapman, Salomeh Keyhani:
Automatic Extraction of Social Determinants of Health from Veterans Affairs Clinical Documents using Natural Language Processing. CRI 2017 - 2016
- [j11]Danielle L. Mowery, Brian E. Chapman, Mike Conway, Brett R. South, Erin Madden, Salomeh Keyhani, Wendy W. Chapman:
Extracting a stroke phenotype risk factor from Veteran Health Administration clinical reports: an information content analysis. J. Biomed. Semant. 7: 26 (2016) - [j10]Danielle L. Mowery, Brett R. South, Lee M. Christensen, Jianwei Leng, Laura-Maria Peltonen, Sanna Salanterä, Hanna Suominen, David Martínez, Sumithra Velupillai, Noémie Elhadad, Guergana Savova, Sameer Pradhan, Wendy W. Chapman:
Normalizing acronyms and abbreviations to aid patient understanding of clinical texts: ShARe/CLEF eHealth Challenge 2013, Task 2. J. Biomed. Semant. 7: 43 (2016) - 2015
- [j9]Sameer Pradhan, Noémie Elhadad, Brett R. South, David Martínez, Lee M. Christensen, Amy Vogel, Hanna Suominen, Wendy W. Chapman, Guergana Savova:
Evaluating the state of the art in disorder recognition and normalization of the clinical narrative. J. Am. Medical Informatics Assoc. 22(1): 143-154 (2015) - [c23]Glenn T. Gobbel, Ruth M. Reeves, Brett R. South, Wendy W. Chapman, Jay Jarman, Steven Lay, Michael E. Matheny:
RapTAT: A Tool for Assisted Annotation and Reviewer Training via Online Machine Learning. AMIA 2015 - [c22]Brett R. South, Danielle L. Mowery, Lee M. Christensen, Adi V. Gundlapalli, Melissa Tharp, Marzieh Vali, Marjorie E. Carter, Mike Conway, Salomeh Keyhani, Wendy W. Chapman:
Annotating ADLs and IADLs in Veterans Affairs Clinical Documents. AMIA 2015 - 2014
- [j7]Brett R. South, Danielle L. Mowery, Ying Suo, Jianwei Leng, Óscar Ferrández, Stéphane M. Meystre, Wendy W. Chapman:
Evaluating the effects of machine pre-annotation and an interactive annotation interface on manual de-identification of clinical text. J. Biomed. Informatics 50: 162-172 (2014) - [c20]Brett R. South, Danielle L. Mowery, Chris Leng, Stéphane M. Meystre, Wendy W. Chapman:
A System Usability Study Assessing a Machine-Assisted Interactive Interface to Support Annotation of Protected Health Information in Clinical Texts. AMIA 2014 - [c19]Danielle L. Mowery, Sumithra Velupillai, Brett R. South, Lee M. Christensen, David Martínez, Liadh Kelly, Lorraine Goeuriot, Noémie Elhadad, Sameer Pradhan, Guergana K. Savova, Wendy W. Chapman:
Task 2: ShARe/CLEF eHealth Evaluation Lab 2014. CLEF (Working Notes) 2014: 31-42 - 2013
- [c17]Danielle L. Mowery, Brett R. South, Jianwei Leng, Laura-Maria Murtola, Riitta Danielsson-Ojala, Sanna Salanterä, Wendy W. Chapman:
Creating a Reference Standard of Acronym and Abbreviation Annotations for the ShARe/CLEF eHealth Challenge 2013. AMIA 2013 - [c16]Danielle L. Mowery, Brett R. South, Lee M. Christensen, Laura-Maria Murtola, Sanna Salanterä, Hanna Suominen, David Martínez, Noémie Elhadad, Sameer Pradhan, Guergana K. Savova, Wendy W. Chapman:
Task 2: ShARe/CLEF eHealth Evaluation Lab 2013. CLEF (Working Notes) 2013 - [c15]Sameer Pradhan, Noémie Elhadad, Brett R. South, David Martínez, Lee M. Christensen, Amy Vogel, Hanna Suominen, Wendy W. Chapman, Guergana K. Savova:
Task 1: ShARe/CLEF eHealth Evaluation Lab 2013. CLEF (Working Notes) 2013 - [c14]Hanna Suominen, Sanna Salanterä, Sumithra Velupillai, Wendy Webber Chapman, Guergana K. Savova, Noemie Elhadad, Sameer Pradhan, Brett R. South, Danielle L. Mowery, Gareth J. F. Jones, Johannes Leveling, Liadh Kelly, Lorraine Goeuriot, David Martínez, Guido Zuccon:
Overview of the ShARe/CLEF eHealth Evaluation Lab 2013. CLEF 2013: 212-231 - 2012
- [c8]Brett R. South, Danielle L. Mowery, Óscar Ferrández, Shuying Shen, Ying Suo, Mingyuan Zhang, Annie Chen, Liqin Wang, Stéphane M. Meystre, Wendy Webber Chapman:
On the Road Towards Developing a Publicly Available Corpus of De-identified Clinical Texts. AMIA 2012 - [c5]Brett R. South, Shuying Shen, Jianwei Leng, Tyler Forbush, Scott L. DuVall, Wendy W. Chapman:
A Prototype Tool Set to Support Machine-Assisted Annotation. BioNLP@HLT-NAACL 2012: 130-139 - 2009
- [j1]Brett R. South, Shuying Shen, Makoto Jones, Jennifer H. Garvin, Matthew H. Samore, Wendy Webber Chapman, Adi V. Gundlapalli:
Developing a manually annotated clinical document corpus to identify phenotypic information for inflammatory bowel disease. BMC Bioinform. 10(S-9): 12 (2009) - 2008
- [c1]Brett R. South, Wendy W. Chapman, Sylvain Delisle, Shuying Shen, Ericka Kalp, Trish Perl, Matthew H. Samore, Adi V. Gundlapalli:
Optimizing A Syndromic Surveillance Text Classifier for Influenza-like Illness: Does Document Source Matter? AMIA 2008
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