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ORCIDMatthew J. Clarkson
- > Home > Persons > Matthew J. Clarkson
Publications
- 2023
[j46]João Ramalhinho
, Soojeong Yoo, Thomas Dowrick, Bongjin Koo, Murali Somasundaram, Kurinchi Gurusamy, David J. Hawkes, Brian R. Davidson, Ann Blandford, Matthew J. Clarkson:
The value of Augmented Reality in surgery - A usability study on laparoscopic liver surgery. Medical Image Anal. 90: 102943 (2023)- [c44]Nina Montaña Brown, Shaheer U. Saeed, Ahmed Abdulaal, Thomas Dowrick, Yakup Kilic, Sophie Wilkinson, Jack Gao, Meghavi Mashar, Chloe He, Alkisti Stavropoulou, Emma Thomson, Zachary M. C. Baum, Simone Foti, Brian R. Davidson, Yipeng Hu, Matthew J. Clarkson:
SARAMIS: Simulation Assets for Robotic Assisted and Minimally Invasive Surgery. NeurIPS 2023 - 2022
- [j45]Bongjin Koo, Maria R. Robu, Moustafa Allam, Micha Pfeiffer, Stephen A. Thompson, Kurinchi Gurusamy, Brian R. Davidson, Stefanie Speidel, David J. Hawkes, Danail Stoyanov, Matthew J. Clarkson:
Automatic, global registration in laparoscopic liver surgery. Int. J. Comput. Assist. Radiol. Surg. 17(1): 167-176 (2022) - [j44]Thomas Dowrick, Brian R. Davidson, Kurinchi Gurusamy, Matthew J. Clarkson:
Large scale simulation of labeled intraoperative scenes in unity. Int. J. Comput. Assist. Radiol. Surg. 17(5): 961-963 (2022) - [j43]João Ramalhinho, Bongjin Koo, Nina Montaña Brown, Shaheer U. Saeed, Ester Bonmati, Kurinchi Gurusamy, Stephen P. Pereira, Brian R. Davidson, Yipeng Hu, Matthew J. Clarkson:
Deep hashing for global registration of untracked 2D laparoscopic ultrasound to CT. Int. J. Comput. Assist. Radiol. Surg. 17(8): 1461-1468 (2022) - [j39]Ester Bonmati, Yipeng Hu, Alexander Grimwood, Gavin J. Johnson, George Goodchild, Margaret G. Keane, Kurinchi Gurusamy, Brian R. Davidson, Matthew J. Clarkson, Stephen P. Pereira, Dean C. Barratt:
Voice-Assisted Image Labeling for Endoscopic Ultrasound Classification Using Neural Networks. IEEE Trans. Medical Imaging 41(6): 1311-1319 (2022) - [c39]Nina Montaña Brown, João Ramalhinho, Bongjin Koo, Moustafa Allam, Brian R. Davidson, Kurinchi Gurusamy, Yipeng Hu, Matthew J. Clarkson:
Towards Multi-modal Self-supervised Video and Ultrasound Pose Estimation for Laparoscopic Liver Surgery. ASMUS@MICCAI 2022: 183-192 - [i14]Shaheer U. Saeed, João Ramalhinho, Mark A. Pinnock, Ziyi Shen, Yunguan Fu, Nina Montaña Brown, Ester Bonmati, Dean C. Barratt, Stephen P. Pereira, Brian R. Davidson, Matthew J. Clarkson, Yipeng Hu:
Active learning using adaptable task-based prioritisation. CoRR abs/2212.01703 (2022) - 2021
- [j36]Nina Montaña Brown, João Ramalhinho, Moustafa Allam, Brian R. Davidson, Yipeng Hu, Matthew J. Clarkson:
Vessel segmentation for automatic registration of untracked laparoscopic ultrasound to CT of the liver. Int. J. Comput. Assist. Radiol. Surg. 16(7): 1151-1160 (2021) - [j32]João Ramalhinho, Henry F. J. Tregidgo, Kurinchi Gurusamy, David J. Hawkes, Brian R. Davidson, Matthew J. Clarkson:
Registration of Untracked 2D Laparoscopic Ultrasound to CT Images of the Liver Using Multi-Labelled Content-Based Image Retrieval. IEEE Trans. Medical Imaging 40(3): 1042-1054 (2021) - [i10]Ester Bonmati, Yipeng Hu, Alexander Grimwood, Gavin J. Johnson, George Goodchild, Margaret G. Keane, Kurinchi Gurusamy, Brian R. Davidson, Matthew J. Clarkson, Stephen P. Pereira, Dean C. Barratt:
Voice-assisted Image Labelling for Endoscopic Ultrasound Classification using Neural Networks. CoRR abs/2110.06367 (2021) - 2020
- [j27]Niels van Berkel, Matthew J. Clarkson, Guofang Xiao, Eren Dursun, Moustafa Allam, Brian R. Davidson, Ann Blandford:
Dimensions of ecological validity for usability evaluations in clinical settings. J. Biomed. Informatics 110: 103553 (2020) - [c33]Simone Foti, Bongjin Koo, Thomas Dowrick, João Ramalhinho, Moustafa Allam, Brian R. Davidson, Danail Stoyanov, Matthew J. Clarkson:
Intraoperative Liver Surface Completion with Graph Convolutional VAE. UNSURE/GRAIL@MICCAI 2020: 198-207 - [i6]Simone Foti, Bongjin Koo, Thomas Dowrick, João Ramalhinho, Moustafa Allam, Brian R. Davidson, Danail Stoyanov, Matthew J. Clarkson:
Intraoperative Liver Surface Completion with Graph Convolutional VAE. CoRR abs/2009.03871 (2020) - 2019
- [c32]João Ramalhinho, Henry F. J. Tregidgo, Moustafa Allam, Nikolina Travlou, Kurinchi Gurusamy, Brian R. Davidson, David J. Hawkes, Dean C. Barratt, Matthew J. Clarkson:
Registration of Untracked 2D Laparoscopic Ultrasound Liver Images to CT Using Content-Based Retrieval and Kinematic Priors. SUSI/PIPPI@MICCAI 2019: 11-19 - [c31]Micha Pfeiffer, Isabel Funke, Maria R. Robu, Sebastian Bodenstedt, Leon Strenger, Sandy Engelhardt, Tobias Roß, Matthew J. Clarkson, Kurinchi Gurusamy, Brian R. Davidson, Lena Maier-Hein, Carina Riediger, Thilo Welsch, Jürgen Weitz, Stefanie Speidel:
Generating Large Labeled Data Sets for Laparoscopic Image Processing Tasks Using Unpaired Image-to-Image Translation. MICCAI (5) 2019: 119-127 - [c30]Yunguan Fu, Maria R. Robu, Bongjin Koo, Crispin Schneider, Stijn van Laarhoven, Danail Stoyanov, Brian R. Davidson, Matthew J. Clarkson, Yipeng Hu:
More Unlabelled Data or Label More Data? A Study on Semi-supervised Laparoscopic Image Segmentation. DART/MIL3ID@MICCAI 2019: 173-180 - [i4]Micha Pfeiffer, Isabel Funke, Maria R. Robu, Sebastian Bodenstedt, Leon Strenger, Sandy Engelhardt, Tobias Roß, Matthew J. Clarkson, Kurinchi Gurusamy, Brian R. Davidson, Lena Maier-Hein, Carina Riediger, Thilo Welsch, Jürgen Weitz, Stefanie Speidel:
Generating large labeled data sets for laparoscopic image processing tasks using unpaired image-to-image translation. CoRR abs/1907.02882 (2019) - [i3]Yunguan Fu, Maria R. Robu, Bongjin Koo, Crispin Schneider, Stijn van Laarhoven, Danail Stoyanov, Brian R. Davidson, Matthew J. Clarkson, Yipeng Hu:
More unlabelled data or label more data? A study on semi-supervised laparoscopic image segmentation. CoRR abs/1908.08035 (2019) - 2018
- [j23]Stephen A. Thompson, Crispin Schneider, Michele Bosi, Kurinchi Gurusamy, Sébastien Ourselin, Brian R. Davidson, David J. Hawkes, Matthew J. Clarkson:
In vivo estimation of target registration errors during augmented reality laparoscopic surgery. Int. J. Comput. Assist. Radiol. Surg. 13(6): 865-874 (2018) - [j22]Ester Bonmati, Yipeng Hu, Eli Gibson, Laura Uribarri, Geri Keane, Kurinchi Gurusamy, Brian R. Davidson, Stephen P. Pereira, Matthew J. Clarkson, Dean C. Barratt:
Determination of optimal ultrasound planes for the initialisation of image registration during endoscopic ultrasound-guided procedures. Int. J. Comput. Assist. Radiol. Surg. 13(6): 875-883 (2018) - [j20]Maria R. Robu, João Ramalhinho, Stephen A. Thompson, Kurinchi Gurusamy, Brian R. Davidson, David J. Hawkes, Danail Stoyanov, Matthew J. Clarkson:
Global rigid registration of CT to video in laparoscopic liver surgery. Int. J. Comput. Assist. Radiol. Surg. 13(6): 947-956 (2018) - [j19]João Ramalhinho, Maria R. Robu, Stephen A. Thompson, Kurinchi Gurusamy, Brian R. Davidson, David J. Hawkes, Dean C. Barratt, Matthew J. Clarkson:
A pre-operative planning framework for global registration of laparoscopic ultrasound to CT images. Int. J. Comput. Assist. Radiol. Surg. 13(8): 1177-1186 (2018) - [j18]Eli Gibson, Francesco Giganti, Yipeng Hu, Ester Bonmati, Steve Bandula, Kurinchi Gurusamy, Brian R. Davidson, Stephen P. Pereira, Matthew J. Clarkson, Dean C. Barratt:
Automatic Multi-Organ Segmentation on Abdominal CT With Dense V-Networks. IEEE Trans. Medical Imaging 37(8): 1822-1834 (2018) - [c29]Neil T. Clancy, Kurinchi Gurusamy, Geoffrey Jones, Brian R. Davidson, Matthew J. Clarkson, David J. Hawkes, Danail Stoyanov:
Spectral Imaging Of Thermal Damage Induced During Microwave Ablation In The Liver. EMBC 2018: 3001-3004 - [c28]Timur Kuzhagaliyev, Neil T. Clancy, Mirek Janatka, Kevin Tchaka, Francisco Vasconcelos, Matthew J. Clarkson, Kurinchi Gurusamy, David J. Hawkes, Brian R. Davidson, Danail Stoyanov:
Augmented reality needle ablation guidance tool for irreversible electroporation in the pancreas. Medical Imaging: Image-Guided Procedures 2018: 1057613 - [i1]Timur Kuzhagaliyev, Neil T. Clancy, Mirek Janatka, Kevin Tchaka, Francisco Vasconcelos, Matthew J. Clarkson, Kurinchi Gurusamy, David J. Hawkes, Brian R. Davidson, Danail Stoyanov:
Augmented Reality needle ablation guidance tool for Irreversible Electroporation in the pancreas. CoRR abs/1802.03274 (2018) - 2017
- [j17]Maria Robu, Philip J. Edwards, João Ramalhinho, Stephen A. Thompson, Brian R. Davidson, David J. Hawkes, Danail Stoyanov, Matthew J. Clarkson:
Intelligent viewpoint selection for efficient CT to video registration in laparoscopic liver surgery. Int. J. Comput. Assist. Radiol. Surg. 12(7): 1079-1088 (2017) - [c27]Eli Gibson, Francesco Giganti, Yipeng Hu, Ester Bonmati, Steve Bandula, Kurinchi Gurusamy, Brian R. Davidson, Stephen P. Pereira, Matthew J. Clarkson, Dean C. Barratt:
Towards Image-Guided Pancreas and Biliary Endoscopy: Automatic Multi-organ Segmentation on Abdominal CT with Dense Dilated Networks. MICCAI (1) 2017: 728-736 - [c26]Eli Gibson, Maria R. Robu, Stephen A. Thompson, Eddie Edwards, Crispin Schneider, Kurinchi Gurusamy, Brian R. Davidson, David J. Hawkes, Dean C. Barratt, Matthew J. Clarkson:
Deep residual networks for automatic segmentation of laparoscopic videos of the liver. Medical Imaging: Image-Guided Procedures 2017: 101351M - [c25]Stephen A. Thompson, Yannic Meuer, Eddie Edwards, João Ramalhinho, Maria Ruxandra Robu, Danail Stoyanov, Sébastien Ourselin, Brian R. Davidson, David J. Hawkes, Matthew J. Clarkson:
On pattern selection for laparoscope calibration. Medical Imaging: Image-Guided Procedures 2017: 101351W - [c24]João Ramalhinho, Maria Robu, Stephen A. Thompson, Philip J. Edwards, Crispin Schneider, Kurinchi Gurusamy, David J. Hawkes, Brian R. Davidson, Dean C. Barratt, Matthew J. Clarkson:
Breathing motion compensated registration of laparoscopic liver ultrasound to CT. Medical Imaging: Image-Guided Procedures 2017: 101352V - 2016
- [j15]Stephen A. Thompson, Danail Stoyanov, Crispin Schneider, Kurinchi Gurusamy, Sébastien Ourselin, Brian R. Davidson, David J. Hawkes, Matthew J. Clarkson:
Hand-eye calibration for rigid laparoscopes using an invariant point. Int. J. Comput. Assist. Radiol. Surg. 11(6): 1071-1080 (2016) - [c23]Ester Bonmati, Yipeng Hu, Kurinchi Gurusamy, Brian R. Davidson, Stephen P. Pereira, Matthew J. Clarkson, Dean C. Barratt:
Assessment of Electromagnetic Tracking Accuracy for Endoscopic Ultrasound. CARE@MICCAI 2016: 36-47 - 2015
- [j11]Yi Song, Johannes Totz, Steve Thompson, Stian Flage Johnsen, Dean C. Barratt, Crispin Schneider, Kurinchi Gurusamy, Brian R. Davidson, Sébastien Ourselin, David J. Hawkes, Matthew J. Clarkson:
Locally rigid, vessel-based registration for laparoscopic liver surgery. Int. J. Comput. Assist. Radiol. Surg. 10(12): 1951-1961 (2015) - [c22]Stian Flage Johnsen, Stephen A. Thompson, Matthew J. Clarkson, Marc Modat, Yi Song, Johannes Totz, Kurinchi Gurusamy, Brian R. Davidson, Zeike A. Taylor, David J. Hawkes, Sébastien Ourselin:
Database-Based Estimation of Liver Deformation under Pneumoperitoneum for Surgical Image-Guidance and Simulation. MICCAI (2) 2015: 450-458 - [c21]Stephen A. Thompson, Johannes Totz, Yi Song, Stian Flage Johnsen, Danail Stoyanov, Sébastien Ourselin, Kurinchi Gurusamy, Crispin Schneider, Brian R. Davidson, David J. Hawkes, Matthew J. Clarkson:
Accuracy validation of an image guided laparoscopy system for liver resection. Medical Imaging: Image-Guided Procedures 2015: 941509 - 2014
- [c18]Johannes Totz, Stephen A. Thompson, Danail Stoyanov, Kurinchi Gurusamy, Brian R. Davidson, David J. Hawkes, Matthew J. Clarkson:
Fast Semi-dense Surface Reconstruction from Stereoscopic Video in Laparoscopic Surgery. IPCAI 2014: 206-215 - 2012
- [c16]Stian Flage Johnsen, Zeike A. Taylor, Matthew J. Clarkson, Stephen A. Thompson, M. Hu, Kurinchi Gurusamy, Brian R. Davidson, David J. Hawkes, Sébastien Ourselin:
Explicit contact modeling for surgical computer guidance and simulation. Medical Imaging: Image-Guided Procedures 2012: 831623
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