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Veli Mäkinen

Name: dblp XML data dump
Creator: Schloss Dagstuhl - Leibniz Center for Informatics
Published: 1993
License: https://creativecommons.org/publicdomain/zero/1.0/
Keywords: dblp, XML, computer science, scholarly publications, metadata

◀ ▶ joint publications with Djamal Belazzougui

> Home > Persons > Veli Mäkinen

Publications

2023
[b2]
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Veli Mäkinen, Djamal Belazzougui, Fabio Cunial, Alexandru I. Tomescu:
Genome-Scale Algorithm Design: Bioinformatics in the Era of High-Throughput Sequencing (2nd edition). Cambridge University Press 2023, ISBN 9781009341233
2020
[j49]
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  - journals/talg/BelazzouguiCKM20
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Djamal Belazzougui, Fabio Cunial, Juha Kärkkäinen, Veli Mäkinen:
Linear-time String Indexing and Analysis in Small Space. ACM Trans. Algorithms 16(2): 17:1-17:54 (2020)
2018
[j39]
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Djamal Belazzougui, Travis Gagie, Veli Mäkinen, Marco Previtali, Simon J. Puglisi:
Bidirectional Variable-Order de Bruijn Graphs. Int. J. Found. Comput. Sci. 29(8): 1279-1295 (2018)
[i15]
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  - journals/corr/abs-1805-05228
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Diego Díaz-Domínguez, Djamal Belazzougui, Travis Gagie, Veli Mäkinen, Gonzalo Navarro, Simon J. Puglisi:
Assembling Omnitigs using Hidden-Order de Bruijn Graphs. CoRR abs/1805.05228 (2018)
2017
[j37]
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  - journals/bmcbi/AlankoCBM17
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Jarno Alanko, Fabio Cunial, Djamal Belazzougui, Veli Mäkinen:
A framework for space-efficient read clustering in metagenomic samples. BMC Bioinform. 18(S-3): 49-60 (2017)
2016
[c46]
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  - conf/latin/BelazzouguiGMPP16
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Djamal Belazzougui, Travis Gagie, Veli Mäkinen, Marco Previtali, Simon J. Puglisi:
Bidirectional Variable-Order de Bruijn Graphs. LATIN 2016: 164-178
[c44]
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  - conf/spire/BelazzouguiGMP16
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Djamal Belazzougui, Travis Gagie, Veli Mäkinen, Marco Previtali:
Fully Dynamic de Bruijn Graphs. SPIRE 2016: 145-152
[r6]
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  - reference/algo/BelazzouguiMV16
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Djamal Belazzougui, Veli Mäkinen, Daniel Valenzuela:
Compressed Suffix Array. Encyclopedia of Algorithms 2016: 386-390
[i13]
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Djamal Belazzougui, Travis Gagie, Veli Mäkinen, Marco Previtali:
Fully Dynamic de Bruijn Graphs. CoRR abs/1607.04909 (2016)
[i12]
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Djamal Belazzougui, Fabio Cunial, Juha Kärkkäinen, Veli Mäkinen:
Linear-time string indexing and analysis in small space. CoRR abs/1609.06378 (2016)
2015
[b1]
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  - books/cu/MBCT2015
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Veli Mäkinen, Djamal Belazzougui, Fabio Cunial, Alexandru I. Tomescu:
Genome-Scale Algorithm Design: Biological Sequence Analysis in the Era of High-Throughput Sequencing. Cambridge University Press 2015, ISBN 9781107078536
2013
[c41]
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  - conf/esa/BelazzouguiCKM13
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Djamal Belazzougui, Fabio Cunial, Juha Kärkkäinen, Veli Mäkinen:
Versatile Succinct Representations of the Bidirectional Burrows-Wheeler Transform. ESA 2013: 133-144

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