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John Quackenbush

Name: dblp XML data dump
Creator: Schloss Dagstuhl - Leibniz Center for Informatics
Published: 1993
License: https://creativecommons.org/publicdomain/zero/1.0/
Keywords: dblp, XML, computer science, scholarly publications, metadata

◀ ▶ joint publications with Kimberly Glass

> Home > Persons > John Quackenbush

Publications

2022
[j51]
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  dblp key:
  - journals/nar/GuebilaLWSBSPGK22
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  persistent URL:
  - https://dblp.org/rec/journals/nar/GuebilaLWSBSPGK22
Marouen Ben Guebila, Camila Miranda Lopes-Ramos, Deborah A. Weighill, Abhijeet Rajendra Sonawane, Rebekka Burkholz, Behrouz Shamsaei, John Platig, Kimberly Glass, Marieke L. Kuijjer, John Quackenbush:
GRAND: a database of gene regulatory network models across human conditions. Nucleic Acids Res. 50(D1): 610-621 (2022)
2021
[c11]
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  dblp key:
  - conf/aaai/WeighillGLGQPB21
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  - https://dblp.org/rec/conf/aaai/WeighillGLGQPB21
Deborah A. Weighill, Marouen Ben Guebila, Camila Miranda Lopes-Ramos, Kimberly Glass, John Quackenbush, John Platig, Rebekka Burkholz:
Gene Regulatory Network Inference as Relaxed Graph Matching. AAAI 2021: 10263-10272
2020
[j48]
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  - journals/bioinformatics/KuijjerFMQG20
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  - https://dblp.org/rec/journals/bioinformatics/KuijjerFMQG20
Marieke L. Kuijjer, Maud Fagny, Alessandro Marin, John Quackenbush, Kimberly Glass:
PUMA: PANDA Using MicroRNA Associations. Bioinform. 36(18): 4765-4773 (2020)
2017
[j46]
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  - journals/bioinformatics/SchlauchPYGQ17
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  - https://dblp.org/rec/journals/bioinformatics/SchlauchPYGQ17
Daniel Schlauch, Joseph N. Paulson, Albert Young, Kimberly Glass, John Quackenbush:
Estimating gene regulatory networks with pandaR. Bioinform. 33(14): 2232-2234 (2017)
[j45]
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  - journals/bmcbi/NishiharaGMHNQK17
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  - https://dblp.org/rec/journals/bmcbi/NishiharaGMHNQK17
Reiko Nishihara, Kimberly Glass, Kosuke Mima, Tsuyoshi Hamada, Jonathan A. Nowak, Zhi Rong Qian, Peter Kraft, Edward L. Giovannucci, Charles S. Fuchs, Andrew T. Chan, John Quackenbush, Shuji Ogino, Jukka-Pekka Onnela:
Biomarker correlation network in colorectal carcinoma by tumor anatomic location. BMC Bioinform. 18(1): 304 (2017)
[j44]
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  - journals/bmcbi/PaulsonCLKPSFGQ17
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Joseph N. Paulson, Cho-Yi Chen, Camila Miranda Lopes-Ramos, Marieke L. Kuijjer, John Platig, Abhijeet R. Sonawane, Maud Fagny, Kimberly Glass, John Quackenbush:
Tissue-aware RNA-Seq processing and normalization for heterogeneous and sparse data. BMC Bioinform. 18(1): 437:1-437:10 (2017)
2016
[j43]
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  - journals/bioinformatics/IJzendoornGQK16
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  - https://dblp.org/rec/journals/bioinformatics/IJzendoornGQK16
David G. P. van IJzendoorn, Kimberly Glass, John Quackenbush, Marieke L. Kuijjer:
PyPanda: a Python package for gene regulatory network reconstruction. Bioinform. 32(21): 3363-3365 (2016)
2015
[j39]
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  - journals/bmcbi/GlassQSHY15
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  - https://dblp.org/rec/journals/bmcbi/GlassQSHY15
Kimberly Glass, John Quackenbush, Dimitrios Spentzos, Benjamin Haibe-Kains, Guo-Cheng Yuan:
A network model for angiogenesis in ovarian cancer. BMC Bioinform. 16: 115:1-115:17 (2015)
[c5]
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  - conf/hpec/GlassQK15
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  - https://dblp.org/rec/conf/hpec/GlassQK15
Kimberly Glass, John Quackenbush, Jeremy Kepner:
High performance computing of gene regulatory networks using a message-passing model. HPEC 2015: 1-6
2014
[j36]
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  - journals/bmcsb/GlassQSCRYD14
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Kimberly Glass, John Quackenbush, Edwin K. Silverman, Bartolome Celli, Stephen I. Rennard, Guo-Cheng Yuan, Dawn L. DeMeo:
Sexually-dimorphic targeting of functionally-related genes in COPD. BMC Syst. Biol. 8: 118 (2014)

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