Остановите войну!
for scientists:
default search action
Daniele D'Agostino
- > Home > Persons > Daniele D'Agostino
Publications
- 2023
- [j43]Ivan Merelli, Stefano Beretta, Daniela Cesana, Alessandro Gennari, Fabrizio Benedicenti, Giulio Spinozzi, Daniele Cesini, Eugenio Montini, Daniele D'Agostino, Andrea Calabria:
InCliniGene enables high-throughput and comprehensive in vivo clonal tracking toward clinical genomics data integration. Database J. Biol. Databases Curation 2023 (2023) - 2021
- [j41]Daniele D'Agostino, Pietro Liò, Marco Aldinucci, Ivan Merelli:
Advantages of using graph databases to explore chromatin conformation capture experiments. BMC Bioinform. 22-S(2): 43 (2021) - [j39]Daniele D'Agostino, Ivan Merelli, Marco Aldinucci, Daniele Cesini:
Hardware and Software Solutions for Energy-Efficient Computing in Scientific Programming. Sci. Program. 2021: 5514284:1-5514284:9 (2021) - 2020
- [j37]Ivan Merelli, Pietro Liò, Igor V. Kotenko, Daniele D'Agostino:
Latest advances in parallel, distributed, and network-based processing. Concurr. Comput. Pract. Exp. 32(10) (2020) - [j36]Lucia Morganti, Elena Corni, Luca Lama, Carmelo Pellegrino, Francieli Zanon Boito, Ivan Merelli, Daniele D'Agostino, Daniele Cesini:
On low-power SoCs as storage bricks for Bioinformatics. Concurr. Comput. Pract. Exp. 32(10) (2020) - [j34]Luca Verderame, Ivan Merelli, Lucia Morganti, Elena Corni, Daniele Cesini, Daniele D'Agostino, Alessio Merlo:
A secure cloud-edges computing architecture for metagenomics analysis. Future Gener. Comput. Syst. 111: 919-930 (2020) - 2019
- [j32]Daniele D'Agostino, Lucia Morganti, Elena Corni, Daniele Cesini, Ivan Merelli:
Combining Edge and Cloud computing for low-power, cost-effective metagenomics analysis. Future Gener. Comput. Syst. 90: 79-85 (2019) - [j29]Daniele D'Agostino, Alfonso Quarati, Andrea Clematis, Lucia Morganti, Elena Corni, Valentina Giansanti, Daniele Cesini, Ivan Merelli:
SoC-based computing infrastructures for scientific applications and commercial services: Performance and economic evaluations. Future Gener. Comput. Syst. 96: 11-22 (2019) - [j28]Ivan Merelli, Federico Fornari, Fabio Tordini, Daniele D'Agostino, Marco Aldinucci, Daniele Cesini:
Exploiting Docker containers over Grid computing for a comprehensive study of chromatin conformation in different cell types. J. Parallel Distributed Comput. 134: 116-127 (2019) - [c52]Daniele D'Agostino, Pietro Liò, Marco Aldinucci, Ivan Merelli:
NeoHiC: A Web Application for the Analysis of Hi-C Data. CIBB 2019: 98-107 - [c51]Valentina Giansanti, Stefano Beretta, Daniele Cesini, Daniele D'Agostino, Ivan Merelli:
Parallel Computing in Deep Learning: Bioinformatics Case Studiesa. PDP 2019: 329-333 - 2018
- [j25]Ivan Merelli, Lucia Morganti, Elena Corni, Carmelo Pellegrino, Daniele Cesini, Luca Roverelli, Gabriele Zereik, Daniele D'Agostino:
Low-power portable devices for metagenomics analysis: Fog computing makes bioinformatics ready for the Internet of Things. Future Gener. Comput. Syst. 88: 467-478 (2018) - [c50]Valentina Giansanti, Daniele D'Agostino, Carlo Maj, Stefano Beretta, Ivan Merelli:
Computing Empirical P-Values for Estimating Gene-Gene Interactions in Genome-Wide Association Studies: A Parallel Computing Approach. PDP 2018: 406-409 - [c49]Lucia Morganti, Daniele Cesini, Elena Corni, Luca Lama, Carmelo Pellegrino, Ivan Merelli, Daniele D'Agostino:
Low-Power Storage Bricks and Bioinformatics on Systems-On-Chip. PDP 2018: 635-638 - 2017
- [j23]Ivan Merelli, Paolo Cozzi, Elisabetta Ronchieri, Daniele Cesini, Daniele D'Agostino:
Porting bioinformatics applications from grid to cloud: A macromolecular surface analysis application case study. Int. J. High Perform. Comput. Appl. 31(3): 182-195 (2017) - [c48]Daniele D'Agostino, Daniele Cesini, Elena Corni, Andrea Ferraro, Lucia Morganti, Alfonso Quarati, Ivan Merelli:
Performance and Economic Evaluations in Adopting Low Power Architectures: A Real Case Analysis. GECON 2017: 177-189 - [c45]Lucia Morganti, Elena Corni, Andrea Ferraro, Daniele Cesini, Daniele D'Agostino, Ivan Merelli:
Implementing a Space-Aware Stochastic Simulator on Low-Power Architectures: A Systems Biology Case Study. PDP 2017: 303-308 - [c44]Stefano Beretta, Lucia Morganti, Elena Corni, Andrea Ferraro, Daniele Cesini, Daniele D'Agostino, Luciano Milanesi, Ivan Merelli:
Low-Power Architectures for miRNA-Target Genome Wide Analysis. PDP 2017: 309-312 - 2016
- [c42]Elisabetta Ronchieri, Daniele D'Agostino, Luciano Milanesi, Ivan Merelli:
MicroRNA-Target Interaction: A Parallel Approach for Computing Pairing Energy. PDP 2016: 535-540 - 2015
- [c41]Giacomo Paschina, Luca Roverelli, Daniele D'Agostino, Federica Chiappori, Ivan Merelli:
Clustering Protein Structures with Hadoop. CIBB 2015: 141-153 - 2014
- [j16]Ivan Merelli, Horacio Emilio Pérez Sánchez, Sandra Gesing, Daniele D'Agostino:
Latest advances in distributed, parallel, and graphic processing unit accelerated approaches to computational biology. Concurr. Comput. Pract. Exp. 26(10): 1699-1704 (2014) - [j15]Daniele D'Agostino, Andrea Clematis, Sergio Decherchi, Walter Rocchia, Luciano Milanesi, Ivan Merelli:
CUDA accelerated molecular surface generation. Concurr. Comput. Pract. Exp. 26(10): 1819-1831 (2014) - [c39]Daniele D'Agostino, Giulia Pasquale, Ivan Merelli:
A Fine-Grained CUDA Implementation of the Multi-objective Evolutionary Approach NSGA-II: Potential Impact for Computational and Systems Biology Applications. CIBB 2014: 273-284 - [c37]Elisabetta Ronchieri, Daniele Cesini, Daniele D'Agostino, Vincenzo Ciaschini, Gianni Dalla Torre, Paolo Cozzi, Davide Salomoni, Andrea Clematis, Luciano Milanesi, Ivan Merelli:
The WNoDeS Cloud Virtualization Framework: A Macromolecular Surface Analysis Application Case Study. PDP 2014: 218-222 - [c36]Giulia Pasquale, Carlo Maj, Andrea Clematis, Ettore Mosca, Luciano Milanesi, Ivan Merelli, Daniele D'Agostino:
A CUDA Implementation of the Spatial TAU-Leaping in Crowded Compartments (STAUCC) Simulator. PDP 2014: 609-616 - 2013
- [c34]Ettore Mosca, Ivan Merelli, Luciano Milanesi, Andrea Clematis, Daniele D'Agostino:
A Parallel Implementation of the Stau-DPP Stochastic Simulator for the Modelling of Biological Systems. PDP 2013: 427-431 - 2012
- [c31]Daniele D'Agostino, Andrea Clematis, Alessandro Guffanti, Luciano Milanesi, Ivan Merelli:
A CUDA-based Implementation of the SSAKE Genomics Application. PDP 2012: 612-616 - 2011
- [j8]Ivan Merelli, Paolo Cozzi, Daniele D'Agostino, Andrea Clematis, Luciano Milanesi:
Image-Based Surface Matching Algorithm Oriented to Structural Biology. IEEE ACM Trans. Comput. Biol. Bioinform. 8(4): 1004-1016 (2011) - [c29]Daniele D'Agostino, Ivan Merelli, René L. Warren, Alessandro Guffanti, Luciano Milanesi, Andrea Clematis:
Parallelization of the SSAKE Genomics Application. PDP 2011: 326-330 - 2010
- [c27]Daniele D'Agostino, Andrea Clematis, Ivan Merelli, Paolo Cozzi, Luciano Milanesi:
A Parallel Algorithm for Molecular Surface Matching Through Image Representation. PDP 2010: 387-394 - 2009
- [c25]Daniele D'Agostino, Andrea Clematis, Ivan Merelli, Paolo Cozzi, Luciano Milanesi:
Parallel Decomposition of 3D Surfaces in Images of Local Descriptors for Molecular Screening. PDP 2009: 261-267 - 2008
- [j3]Ivan Merelli, Alessandro Orro, Daniele D'Agostino, Andrea Clematis, Luciano Milanesi:
A parallel protein surface reconstruction system. Int. J. Bioinform. Res. Appl. 4(3): 221-239 (2008) - [c23]Ivan Merelli, Paolo Cozzi, Daniele D'Agostino, Andrea Clematis, Luciano Milanesi:
Images Based System for Surface Matching in Macromolecular Screening. BIBM 2008: 397-401 - [c22]Antonella Galizia, Federica Viti, Alessandro Orro, Daniele D'Agostino, Ivan Merelli, Luciano Milanesi, Andrea Clematis:
TMAinspect, an EGEE Framework for Tissue MicroArray Image Handling. CCGRID 2008: 741-746 - [c19]Antonella Galizia, Daniele D'Agostino, Andrea Clematis, Federica Viti, Alessandro Orro, Ivan Merelli, Luciano Milanesi:
Enabling Parallel TMA Image Analysis in a Grid Environment. CISIS 2008: 394-399 - [c18]Daniele D'Agostino, Andrea Clematis, Ivan Merelli, Luciano Milanesi, Matteo Coloberti:
A Grid Service based Parallel Molecular Surface Reconstruction System. PDP 2008: 455-462 - 2007
- [c17]Federica Viti, Ivan Merelli, Antonella Galizia, Daniele D'Agostino, Andrea Clematis, Luciano Milanesi:
Tissue MicroArray: a Distributed Grid Approach for Image Analysis. HealthGrid 2007: 291-298 - [c16]Antonella Galizia, Federica Viti, Daniele D'Agostino, Ivan Merelli, Luciano Milanesi, Andrea Clematis:
Experimenting Grid Protocols to Improve Privacy Preservation in Efficient Distributed Image Processing. PARCO 2007: 139-146 - [c15]Daniele D'Agostino, Ivan Merelli, Andrea Clematis, Luciano Milanesi, Alessandro Orro:
A Parallel Workflow for the Reconstruction of Molecular Surfaces. PARCO 2007: 147-154 - 2005
- [j2]Ivan Merelli, Giulia Morra, Daniele D'Agostino, Andrea Clematis, Luciano Milanesi:
High performance workflow implementation for protein surface characterization using grid technology. BMC Bioinform. 6(S-4) (2005) - [c12]Ivan Merelli, Luciano Milanesi, Daniele D'Agostino, Andrea Clematis, Marco Vanneschi, Marco Danelutto:
Using Parallel Isosurface Extraction in Superficial Molecular Modeling. DFMA 2005: 288-294
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from , , and to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from .
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2024-04-25 05:57 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint