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2020 – today
- 2025
[j94]Xubing Hao, Xiaojin Li, Yan Huang, Jay Shi, Rashmie Abeysinghe, Cui Tao, Kirk Roberts, Guo-Qiang Zhang, Licong Cui
:
Quantitatively assessing the impact of the quality of SNOMED CT subtype hierarchy on cohort queries. J. Am. Medical Informatics Assoc. 32(1): 89-96 (2025)- 2024
- [j93]Jianfu Li, Yiming Li, Yuanyi Pan, Jinjing Guo, Zenan Sun, Fang Li, Yongqun He, Cui Tao:
Mapping vaccine names in clinical trials to vaccine ontology using cascaded fine-tuned domain-specific language models. J. Biomed. Semant. 15(1): 14 (2024) - [j92]Zhao Li, Qiang Wei, Liang-Chin Huang, Jianfu Li, Yan Hu, Yao-Shun Chuang, Jianping He, Avisha Das, Vipina Kuttichi Keloth, Yuntao Yang, Chiamaka S. Diala, Kirk E. Roberts, Cui Tao, Xiaoqian Jiang, W. Jim Zheng, Hua Xu:
Ensemble pretrained language models to extract biomedical knowledge from literature. J. Am. Medical Informatics Assoc. 31(9): 1904-1911 (2024) - [j91]Yiming Li, Jeff Zhao, Manqi Li, Yifang Dang, Evan Yu, Jianfu Li, Zenan Sun, Usama Hussein, Jianguo Wen, Ahmed M. Abdelhameed, Junhua Mai, Shenduo Li, Yue Yu, Xinyue Hu, Daowei Yang, Jingna Feng, Zehan Li, Jianping He, Wei Tao, Tiehang Duan, Yanyan Lou, Fang Li, Cui Tao:
RefAI: a GPT-powered retrieval-augmented generative tool for biomedical literature recommendation and summarization. J. Am. Medical Informatics Assoc. 31(9): 2030-2039 (2024) - [j90]Yiming Li, Xueqing Peng, Jianfu Li, Xu Zuo, Suyuan Peng, Donghong Pei, Cui Tao, Hua Xu, Na Hong:
Relation extraction using large language models: a case study on acupuncture point locations. J. Am. Medical Informatics Assoc. 31(11): 2622-2631 (2024) - [j89]Yiming Li, Wei Tao, Zehan Li, Zenan Sun, Fang Li, Susan H. Fenton, Hua Xu, Cui Tao:
Artificial intelligence-powered pharmacovigilance: A review of machine and deep learning in clinical text-based adverse drug event detection for benchmark datasets. J. Biomed. Informatics 152: 104621 (2024) - [j88]Sunyang Fu, Heling Jia, Maria Vassilaki, Vipina Kuttichi Keloth, Yifang Dang, Yujia Zhou, Muskan Garg, Ronald C. Petersen, Jennifer St Sauver, Sungrim Moon, Liwei Wang, Andrew Wen, Fang Li, Hua Xu, Cui Tao, Jungwei Fan, Hongfang Liu, Sunghwan Sohn:
FedFSA: Hybrid and federated framework for functional status ascertainment across institutions. J. Biomed. Informatics 152: 104623 (2024) - [j87]Yiming Li, Qiang Wei, Xinghan Chen, Jianfu Li, Cui Tao, Hua Xu:
Improving tabular data extraction in scanned laboratory reports using deep learning models. J. Biomed. Informatics 159: 104735 (2024) - [j86]Jianping He, Fang Li, Jianfu Li, Xinyue Hu, Yi Nian, Yang Xiang, Jingqi Wang, Qiang Wei, Yiming Li, Hua Xu, Cui Tao:
Prompt Tuning in Biomedical Relation Extraction. J. Heal. Informatics Res. 8(2): 206-224 (2024) - [j85]Madhuri Sankaranarayanapillai, Su Wang, Hangyu Ji, Hsing-yi Song, Cui Tao:
Lessons learned from annotation of VAERS reports on adverse events following influenza vaccination and related to Guillain-Barré syndrome. BMC Medical Informatics Decis. Mak. 23-S(4): 298 (2024) - [j84]Xinyuan Zhang, Yixue Feng, Fang Li, Jin Ding, Danyal Tahseen, Ezekiel Hinojosa, Yong Chen, Cui Tao:
Evaluating MedDRA-to-ICD terminology mappings. BMC Medical Informatics Decis. Mak. 23-S(4): 299 (2024) - [j83]Tiehang Duan, Zhenyi Wang, Fang Li, Gianfranco Doretto, Donald A. Adjeroh, Yiyi Yin, Cui Tao:
Online continual decoding of streaming EEG signal with a balanced and informative memory buffer. Neural Networks 176: 106338 (2024) - [j82]Tiehang Duan, Zhenyi Wang, Li Shen, Gianfranco Doretto, Donald A. Adjeroh, Fang Li, Cui Tao:
Retain and Adapt: Online Sequential EEG Classification With Subject Shift. IEEE Trans. Artif. Intell. 5(9): 4479-4492 (2024) - [c134]Nicole Moore, Muhammad Amith, Ana Neumann, Jane Hamilton, Lu Tang, Lara S. Savas, Cui Tao:
Translating motivational interviewing for the HPV vaccine into a computable ontology model for automated AI conversational interaction. CHI Extended Abstracts 2024: 341:1-341:12 - [c133]Eloisa Nguyen, Rebecca Z. Lin, Yang Gong, Cui Tao, Muhammad Tuan Amith:
Developing a Computational Representation of Human Physical Activity and Exercise Using Open Ontology-Based Approach: A Tai Chi Use Case. ICHI 2024: 31-39 - [c132]Xubing Hao, Licong Cui, Cui Tao, Kirk Roberts, Muhammad Amith:
Analyzing Llama 3-based Approach for Axiom Translation from Ontologies. KBC-LM/LM-KBC@ISWC 2024 - [c131]Wordh Ul Hasan, Kimia Tuz Zaman, Mohammed Shalan, Xin Wang, Juan Li, Bo Xie, Cui Tao:
CareCompanion: A Personalized Virtual Assistant for Enhancing Support and Independence in ADRD Patients and Older Adults. SmartNets 2024: 1-10 - [i20]Song Wang, Yiliang Zhou, Ziqiang Han, Cui Tao, Yunyu Xiao, Ying Ding, Joydeep Ghosh, Yifan Peng:
Uncovering Misattributed Suicide Causes through Annotation Inconsistency Detection in Death Investigation Notes. CoRR abs/2403.19432 (2024) - [i19]Yiming Li, Xueqing Peng, Jianfu Li, Xu Zuo, Suyuan Peng, Donghong Pei, Cui Tao, Hua Xu, Na Hong:
Relation Extraction Using Large Language Models: A Case Study on Acupuncture Point Locations. CoRR abs/2404.05415 (2024) - [i18]Yiming Li, Deepthi Viswaroopan, William He, Jianfu Li, Xu Zuo, Hua Xu, Cui Tao:
Improving Entity Recognition Using Ensembles of Deep Learning and Fine-tuned Large Language Models: A Case Study on Adverse Event Extraction from Multiple Sources. CoRR abs/2406.18049 (2024) - [i17]Yiming Li, Fang Li, Kirk Roberts, Licong Cui, Cui Tao, Hua Xu:
A Comparative Study of Recent Large Language Models on Generating Hospital Discharge Summaries for Lung Cancer Patients. CoRR abs/2411.03805 (2024) - [i16]Jianping He, Laila Rasmy, Haifang Li, Jianfu Li, Zenan Sun, Evan Yu, Degui Zhi, Cui Tao:
Prompting Large Language Models for Clinical Temporal Relation Extraction. CoRR abs/2412.04512 (2024) - 2023
- [j81]Meng Zhang, Madhuri Sankaranarayanapillai, Jingcheng Du, Yang Xiang, Frank J. Manion, Marcelline R. Harris, Cooper Stansbury, Huy Anh Pham, Cui Tao:
Machine learning-based donor permission extraction from informed consent documents. BMC Bioinform. 24(1): 477 (2023) - [j80]Song Wang, Yifang Dang, Zhaoyi Sun, Ying Ding, Jyotishman Pathak, Cui Tao, Yunyu Xiao, Yifan Peng:
An NLP approach to identify SDoH-related circumstance and suicide crisis from death investigation narratives. J. Am. Medical Informatics Assoc. 30(8): 1408-1417 (2023) - [j79]Yifang Dang, Fang Li, Xinyue Hu, Vipina Kuttichi Keloth, Meng Zhang, Sunyang Fu, Muhammad F. Amith, J. Wilfred Fan, Jingcheng Du, Evan Yu, Hongfang Liu, Xiaoqian Jiang, Hua Xu, Cui Tao:
Systematic design and data-driven evaluation of social determinants of health ontology (SDoHO). J. Am. Medical Informatics Assoc. 30(9): 1465-1473 (2023) - [j78]Xubing Hao, Xiaojin Li, Guo-Qiang Zhang, Cui Tao, Paul E. Schulz, Licong Cui:
An ontology-based approach for harmonization and cross-cohort query of Alzheimer's disease data resources. BMC Medical Informatics Decis. Mak. 23(1): 151 (2023) - [j77]Xinyuan Zhang, Rebecca Z. Lin, Muhammad Tuan Amith, Cynthia Wang, Jeremy Light, John Strickley, Cui Tao:
DEVO: an ontology to assist with dermoscopic feature standardization. BMC Medical Informatics Decis. Mak. 23-S(1): 162 (2023) - [c130]Tiehang Duan, Zhenyi Wang, Gianfranco Doretto, Fang Li, Cui Tao, Donald A. Adjeroh:
Replay with Stochastic Neural Transformation for Online Continual EEG Classification. BIBM 2023: 1874-1879 - [c129]Tiehang Duan, Zhenyi Wang, Gianfranco Doretto, Fang Li, Cui Tao, Donald A. Adjeroh:
Distributionally Robust Cross Subject EEG Decoding. ECAI 2023: 575-582 - [c128]Chloe Aguilar, Muhammad Amith, Lu Tang, Jane Hamilton, Lara S. Savas, Danniel Rhee, Tazrin Khan, Cui Tao:
Evaluating Domain-Independent Small Talk Conversations to Improve Clinical Communication Interaction for Human and Machine. HCI (18) 2023: 330-343 - [c127]Xin Wang, Wordh Ul Hasan, Juan Li, Rasha Hendawi, Yang Du, Bo Xie, Cui Tao:
Empowering Personalized Health Data Queries with Knowledge Graph and GPT-Enhanced Voice Assistant. HPCC/DSS/SmartCity/DependSys 2023: 1035-1042 - [c126]Yiming Li, Xueqing Peng, Jianfu Li, Suyuan Peng, Donghong Pei, Cui Tao, Hua Xu, Na Hong:
Development of a Natural Language Processing Tool to Extract Acupuncture Point Location Terms. ICHI 2023: 344-351 - [c125]Zehan Li, Iqra Ameer, Yan Hu, Ahmed Abdelhameed, Cui Tao, Salih Selek, Hua Xu:
Suicide Tendency Prediction from Psychiatric Notes Using Transformer Models. ICHI 2023: 481-483 - [c124]Zenan Sun, Cui Tao:
Named Entity Recognition and Normalization for Alzheimer's Disease Eligibility Criteria. ICHI 2023: 558-564 - [c123]Wordh Ul Hasan, Juan Li, Shadi Alian, Tianyi Liang, Vikram Pandey, Kimia Tuz Zaman, Jun Kong, Cui Tao:
Honoring Heritage, Managing Health: A Mobile Diabetes Self-Management App for Native Americans with Cultural Sensitivity and Local Factors. ISCC 2023: 1-6 - [c122]Kimia Tuz Zaman, Wordh Ul Hasan, Juan Li, Cui Tao:
Empowering Caregivers of Alzheimer's Disease and Related Dementias (ADRD) with a GPT-Powered Voice Assistant: Leveraging Peer Insights from Social Media. ISCC 2023: 1-7 - [c121]Muhammad Amith, Licong Cui, Kirk Roberts, Cui Tao:
Application of an ontology for model cards to generate computable artifacts for linking machine learning information from biomedical research. WWW (Companion Volume) 2023: 820-825 - [i15]Muhammad Amith, Licong Cui, Kirk Roberts, Cui Tao:
Application of an ontology for model cards to generate computable artifacts for linking machine learning information from biomedical research. CoRR abs/2303.11991 (2023) - [i14]Fang Li, Yi Nian, Zenan Sun, Cui Tao:
Advancing Biomedicine with Graph Representation Learning: Recent Progress, Challenges, and Future Directions. CoRR abs/2306.10456 (2023) - [i13]Tiehang Duan, Zhenyi Wang, Gianfranco Doretto, Fang Li, Cui Tao, Donald A. Adjeroh:
Distributionally Robust Cross Subject EEG Decoding. CoRR abs/2308.11651 (2023) - [i12]Xinyue Hu, Zenan Sun, Yi Nian, Yifang Dang, Fang Li, Jingna Feng, Evan Yu, Cui Tao:
Explainable Graph Neural Network for Alzheimer's Disease And Related Dementias Risk Prediction. CoRR abs/2309.06584 (2023) - [i11]Yiming Li, Jianfu Li, Jianping He, Cui Tao:
AE-GPT: Using Large Language Models to Extract Adverse Events from Surveillance Reports-A Use Case with Influenza Vaccine Adverse Events. CoRR abs/2309.16150 (2023) - 2022
- [j76]Warren Manuel, Rashmie Abeysinghe, Yongqun He, Cui Tao, Licong Cui:
Identification of missing hierarchical relations in the vaccine ontology using acquired term pairs. J. Biomed. Semant. 13(1): 22 (2022) - [j75]Muhammad Tuan Amith, Licong Cui, Degui Zhi, Kirk Roberts, Xiaoqian Jiang, Fang Li, Evan Yu, Cui Tao:
Toward a standard formal semantic representation of the model card report. BMC Bioinform. 23(1): 281 (2022) - [j74]Yi Nian, Xinyue Hu, Rui Zhang, Jingna Feng, Jingcheng Du, Fang Li, Larry Bu, Yuji Zhang, Yong Chen, Cui Tao:
Mining on Alzheimer's diseases related knowledge graph to identity potential AD-related semantic triples for drug repurposing. BMC Bioinform. 23-S(6): 407 (2022) - [c120]Mark A. Musen, Jiang Bian, Bruce Chorpita, Vimla Patel, Cui Tao:
Ontologies in the Behavioral Sciences: Accelerating Research and the Accessibility and Use of Knowledge. AMIA 2022 - [c119]Evan Yu, Cui Tao, Jingcheng Du, Degui Zhi, Yang Xiang, Kayo Fujimoto, Xi Luo, John A. Schneider:
Combining Transfer Learning with Graph Attention Models for HIV Risk Prediction. AMIA 2022 - [c118]Jianping He, Fang Li, Xinyue Hu, Jianfu Li, Yi Nian, Jingqi Wang, Yang Xiang, Qiang Wei, Hua Xu, Cui Tao:
Chemical-Protein Relation Extraction with Pre-trained Prompt Tuning. ICHI 2022: 608-609 - [i10]Yi Nian, Xinyue Hu, Rui Zhang, Jingna Feng, Jingcheng Du, Fang Li, Yong Chen, Cui Tao:
Mining On Alzheimer's Diseases Related Knowledge Graph to Identity Potential AD-related Semantic Triples for Drug Repurposing. CoRR abs/2202.08712 (2022) - [i9]Yifang Dang, Fang Li, Xinyue Hu, Vipina Kuttichi Keloth, Meng Zhang, Sunyang Fu, Jingcheng Du, J. Wilfred Fan, Muhammad F. Amith, Evan Yu, Hongfang Liu, Xiaoqian Jiang, Hua Xu, Cui Tao:
Systematic Design and Evaluation of Social Determinants of Health Ontology (SDoHO). CoRR abs/2212.01941 (2022) - 2021
- [j73]Jingcheng Du, Yang Xiang, Madhuri Sankaranarayanapillai, Meng Zhang, Jingqi Wang, Yuqi Si, Huy Anh Pham, Hua Xu, Yong Chen, Cui Tao:
Extracting postmarketing adverse events from safety reports in the vaccine adverse event reporting system (VAERS) using deep learning. J. Am. Medical Informatics Assoc. 28(7): 1393-1400 (2021) - [j72]Jingcheng Du, Qing Wang, Jingqi Wang, Prerana Ramesh, Yang Xiang, Xiaoqian Jiang, Cui Tao:
COVID-19 trial graph: a linked graph for COVID-19 clinical trials. J. Am. Medical Informatics Assoc. 28(9): 1964-1969 (2021) - [j71]Muhammad Amith, Chidinma Onye, Tracey Ledoux, Grace Xiong, Cui Tao:
The ontology of fast food facts: conceptualization of nutritional fast food data for consumers and semantic web applications. BMC Medical Informatics Decis. Mak. 21-S(7): 275 (2021) - [j70]Laila Rasmy, Yang Xiang, Ziqian Xie, Cui Tao, Degui Zhi:
Med-BERT: pretrained contextualized embeddings on large-scale structured electronic health records for disease prediction. npj Digit. Medicine 4 (2021) - [c117]Muhammad Amith, Marcelline R. Harris, Cooper Stansbury, Kathleen Ford, Frank J. Manion, Cui Tao:
Expressing and Executing Informed Consent Permissions using SWRL: The All of Us Use Case. AMIA 2021 - [c116]Daniel J. Stone, Sijia Liu, Yuan Luo, Andrew Wen, Nansu Zong, Luke V. Rasmussen, Prakash Adekkanattu, Pascal S. Brandt, Jennifer A. Pacheco, Fei Wang, Cui Tao, Jyotishman Pathak, Hongfang Liu, Guoqian Jiang:
FHIRTime: Standardizing Temporal Patterns Identified from Clinical Narratives Using HL7 FHIR. AMIA 2021 - [c115]Yunpeng Zhao, Pengfei Yin, Yongqiu Li, Xing He, Jingcheng Du, Cui Tao, Yi Guo, Mattia Prosperi, Pierangelo Veltri, Xi Yang, Yonghui Wu, Jiang Bian:
Data and Model Biases in Social Media Analyses: A Case Study of COVID-19 Tweets. AMIA 2021 - [c114]Rebecca Z. Lin, Muhammad Tuan Amith, Xinyuan Zhang, Cynthia Wang, Jeremy Light, John Strickley, Cui Tao:
Developing Ontologies to Standardize Descriptions of Visual and Dermoscopic Elements. BIBM 2021: 1813-1817 - [c113]Patricia Ngantcha, Muhammad Tuan Amith, Kirk Roberts, John A. Valenza, Muhammad F. Walji, Cui Tao:
Dental EHR-infused Persona Ontologies to Enrich Dental Dialogue Interaction of Agents. BIBM 2021: 1818-1825 - [c112]Anna Zhu, Muhammad Amith, Lu Tang, Rachel Cunningham, Angela Xu, Julie A. Boom, Cui Tao:
Experimenting with a Prototype Interactive Narrative Game to Improve Knowledge and Beliefs for the HPV Vaccine. HCI (43) 2021: 186-201 - [c111]Patricia Ngantcha, Muhammad Amith, Cui Tao, Kirk Roberts:
Patient-Provider Communication Training Models for Interactive Speech Devices. HCI (16) 2021: 250-268 - [c110]Samuel Wang, Jingcheng Du, Lu Tang, Cui Tao:
Understanding Public Perceptions of Measles from Twitter Using Multi-Task Convolutional Neural Networks. MedInfo 2021: 607-611 - [i8]Muhammad Amith, Marcelline R. Harris, Cooper Stansbury, Kathleen Ford, Frank J. Manion, Cui Tao:
Expressing and Executing Informed Consent Permissions Using SWRL: The All of Us Use Case. CoRR abs/2108.10221 (2021) - [i7]Yi Nian, Jingcheng Du, Larry Bu, Fang Li, Xinyue Hu, Yuji Zhang, Cui Tao:
Knowledge Graph-based Neurodegenerative Diseases and Diet Relationship Discovery. CoRR abs/2109.06123 (2021) - 2020
- [j69]Qiang Wei, Yaoyun Zhang, Muhammad Amith, Rebecca Lin, Jenay Lapeyrolerie, Cui Tao, Hua Xu:
Recognizing software names in biomedical literature using machine learning. Health Informatics J. 26(1) (2020) - [j68]Jiang Bian, Yaoyun Zhang, Cui Tao:
Exploring the semantics in mental health research. Health Informatics J. 26(2): 723-725 (2020) - [j67]Fang Li, Guozheng Rao, Jingcheng Du, Yang Xiang, Yaoyun Zhang, Salih Selek, Jane Elizabeth Hamilton, Hua Xu, Cui Tao:
Ontological representation-oriented term normalization and standardization of the Research Domain Criteria. Health Informatics J. 26(2): 726-737 (2020) - [j66]Jianhong Luo, Jingcheng Du, Cui Tao, Hua Xu, Yaoyun Zhang:
Exploring temporal suicidal behavior patterns on social media: Insight from Twitter analytics. Health Informatics J. 26(2): 738-752 (2020) - [j65]Rui Duan, Xinyuan Zhang, Jingcheng Du, Jing Huang, Cui Tao, Yong Chen:
On the evidence consistency of pharmacovigilance outcomes between Food and Drug Administration Adverse Event Reporting System and electronic medical record data for acute mania patients. Health Informatics J. 26(2): 753-764 (2020) - [j64]Qiang Wei, Zongcheng Ji, Zhiheng Li, Jingcheng Du, Jingqi Wang, Jun Xu, Yang Xiang, Firat Tiryaki, Stephen Wu, Yaoyun Zhang, Cui Tao, Hua Xu:
A study of deep learning approaches for medication and adverse drug event extraction from clinical text. J. Am. Medical Informatics Assoc. 27(1): 13-21 (2020) - [j63]Hansi Zhang, Christopher Wheldon, Adam G. Dunn, Cui Tao, Jinhai Huo, Rui Zhang, Mattia Prosperi, Yi Guo, Jiang Bian:
Mining Twitter to assess the determinants of health behavior toward human papillomavirus vaccination in the United States. J. Am. Medical Informatics Assoc. 27(2): 225-235 (2020) - [j62]Rubina F. Rizvi, Jake Vasilakes, Terrence J. Adam, Genevieve B. Melton, Jeffrey R. Bishop, Jiang Bian, Cui Tao, Rui Zhang:
iDISK: the integrated DIetary Supplements Knowledge base. J. Am. Medical Informatics Assoc. 27(4): 539-548 (2020) - [j61]Fang Li, Jingcheng Du, Yongqun He, Hsing-yi Song, Mohcine Madkour, Guozheng Rao, Yang Xiang, Yi Luo, Henry W. Chen, Sijia Liu, Liwei Wang, Hongfang Liu, Hua Xu, Cui Tao:
Time event ontology (TEO): to support semantic representation and reasoning of complex temporal relations of clinical events. J. Am. Medical Informatics Assoc. 27(7): 1046-1056 (2020) - [j60]Laila Rasmy, Firat Tiryaki, Yujia Zhou, Yang Xiang, Cui Tao, Hua Xu, Degui Zhi:
Representation of EHR data for predictive modeling: a comparison between UMLS and other terminologies. J. Am. Medical Informatics Assoc. 27(10): 1593-1599 (2020) - [j59]Muhammad Amith, Rebecca Lin, Licong Cui, Dennis Wang, Anna Zhu, Grace Xiong, Hua Xu, Kirk Roberts, Cui Tao:
Conversational ontology operator: patient-centric vaccine dialogue management engine for spoken conversational agents. BMC Medical Informatics Decis. Mak. 20-S(4): 259 (2020) - [j58]Li Zhang, Jiamei Hu, Qianzhi Xu, Fang Li, Guozheng Rao, Cui Tao:
A semantic relationship mining method among disorders, genes, and drugs from different biomedical datasets. BMC Medical Informatics Decis. Mak. 20-S(4): 283 (2020) - [j57]Zhe He, Cui Tao, Jiang Bian, Rui Zhang:
Selected articles from the Fourth International Workshop on Semantics-Powered Data Mining and Analytics (SEPDA 2019). BMC Medical Informatics Decis. Mak. 20-S(4): 315 (2020) - [j56]Muhammad Amith, Kayo Fujimoto, Rebecca Mauldin, Cui Tao:
Friend of a Friend with Benefits ontology (FOAF+): extending a social network ontology for public health. BMC Medical Informatics Decis. Mak. 20-S(10): 269 (2020) - [c109]Rui Duan, Zhaoyi Chen, Jiayi Tong, Chongliang Luo, Tianchen Lyu, Cui Tao, Demetrius Maraganore, Jiang Bian, Yong Chen:
Leverage Real-World Longitudinal Data in Large Clinical Research Networks for Alzheimer's Disease and Related Dementia (ADRD). AMIA 2020 - [c108]Jiayi Tong, Zhaoyi Chen, Rui Duan, Wei-Hsuan Lo-Ciganic, Tianchen Lyu, Cui Tao, Peter A. Merkel, Henry R. Kranzler, Jiang Bian, Yong Chen:
Identifying Clinical Risk Factors for Opioid Use Disorder using a Distributed Algorithm to Combine Real-World Data from a Large Clinical Data Research Network. AMIA 2020 - [c107]Muhammad Amith, Jing Wang, Grace Xiong, Kirk Roberts, Cui Tao:
A health consumer ontology of fast food information. BIBM 2020: 1714-1719 - [c106]Angela Xu, Muhammad Amith, Jianfu Li, Lu Tang, Cui Tao:
An Interactive Game for Changing Youth Behavior Regarding E-cigarettes. HCI (38) 2020: 512-518 - [c105]Juan Li, Rasha Hendawi, Vikram Pandey, Rafa Alenezi, Xin Wang, Bo Xie, Cui Tao:
Development and Evaluation of ADCareOnto - an Ontology for Personalized Home Care for Persons with Alzheimer's Disease. HealthCom 2020: 1-6 - [c104]Qiang Wei, Yujia Zhou, Bo Zhao, Xinyue Hu, Qiaozhu Mei, Cui Tao, Hua Xu:
Named Entity Recognition from Table Headers in Randomized Controlled Trial Articles. ICHI 2020: 1-2 - [i6]Muhammad Amith, Rebecca Lin, Rachel Cunningham, Qiwei Luna Wu, Lara S. Savas, Yang Gong, Julie A. Boom, Lu Tang, Cui Tao:
Examining Potential Usability and Health Beliefs Among Young Adults Using a Conversational Agent for HPV Vaccine Counseling. CoRR abs/2001.02306 (2020) - [i5]Laila Rasmy, Yang Xiang, Ziqian Xie, Cui Tao, Degui Zhi:
Med-BERT: pre-trained contextualized embeddings on large-scale structured electronic health records for disease prediction. CoRR abs/2005.12833 (2020) - [i4]Mohcine Madkour, Keith A. Butler, Eric Mercer, Ali Bahrami, Cui Tao:
Semantic based model of Conceptual Work Products for formal verification of complex interactive systems. CoRR abs/2008.01623 (2020)
2010 – 2019
- 2019
- [j55]Junguk Hur, Cui Tao, Yongqun He:
A 2018 workshop: vaccine and drug ontology studies (VDOS 2018). BMC Bioinform. 20-S(21): 705 (2019) - [j54]Muhammad Amith, Kirk Roberts, Cui Tao:
Conceiving an application ontology to model patient human papillomavirus vaccine counseling for dialogue management. BMC Bioinform. 20-S(21): 706 (2019) - [j53]Yang Xiang, Kayo Fujimoto, John A. Schneider, Yuxi Jia, Degui Zhi, Cui Tao:
Network context matters: graph convolutional network model over social networks improves the detection of unknown HIV infections among young men who have sex with men. J. Am. Medical Informatics Assoc. 26(11): 1263-1271 (2019) - [j52]Jingcheng Du, Qingyu Chen, Yifan Peng, Yang Xiang, Cui Tao, Zhiyong Lu:
ML-Net: multi-label classification of biomedical texts with deep neural networks. J. Am. Medical Informatics Assoc. 26(11): 1279-1285 (2019) - [j51]Guocai Chen, Yuxi Jia, Lisha Zhu, Ping Li, Lin Zhang, Cui Tao, W. Jim Zheng:
Gene fingerprint model for literature based detection of the associations among complex diseases: a case study of COPD. BMC Medical Informatics Decis. Mak. 19-S(1): 20:1-20:9 (2019) - [j50]Yaoyun Zhang, Cui Tao, Yang Gong, Kai Wang, Zhongming Zhao:
The International Conference on Intelligent Biology and Medicine 2018: Medical Informatics Thematic Track (MedicalInfo2018). BMC Medical Informatics Decis. Mak. 19-S(1): 21:1-21:3 (2019) - [j49]Yang Xiang, Jun Xu, Yuqi Si, Zhiheng Li, Laila Rasmy, Yujia Zhou, Firat Tiryaki, Fang Li, Yaoyun Zhang, Yonghui Wu, Xiaoqian Jiang, W. Jim Zheng, Degui Zhi, Cui Tao, Hua Xu:
Time-sensitive clinical concept embeddings learned from large electronic health records. BMC Medical Informatics Decis. Mak. 19-S(2): 139-148 (2019) - [j48]Jing Huang, Xinyuan Zhang, Jiayi Tong, Jingcheng Du, Rui Duan, Liu Yang, Jason H. Moore, Cui Tao, Yong Chen:
Comparing drug safety of hepatitis C therapies using post-market data. BMC Medical Informatics Decis. Mak. 19-S(4): 147:1-147:12 (2019) - [j47]Zhe He, Jiang Bian, Cui Tao, Rui Zhang:
Selected articles from the Third International Workshop on Semantics-Powered Data Analytics (SEPDA 2018). BMC Medical Informatics Decis. Mak. 19-S(4): 148:1-148:3 (2019) - [j46]Muhammad Amith, Frank J. Manion, Chen Liang, Marcelline R. Harris, Dennis Wang, Yongqun He, Cui Tao:
Architecture and usability of OntoKeeper, an ontology evaluation tool. BMC Medical Informatics Decis. Mak. 19-S(4): 152:1-152:18 (2019) - [j45]Jingcheng Du, Rachel Cunningham, Yang Xiang, Fang Li, Yuxi Jia, Julie A. Boom, Sahiti Myneni, Jiang Bian, Chongliang Luo, Yong Chen, Cui Tao:
Leveraging deep learning to understand health beliefs about the Human Papillomavirus Vaccine from social media. npj Digit. Medicine 2 (2019) - [c103]Marcelline R. Harris, Frank J. Manion, Madhuri Sankaranarayanapillai, Hsing-yi Song, Marisa Conte, Cui Tao:
A Scoping Review to Identify Biobank Classification and Permissions to Share Metadata. AMIA 2019 - [c102]Jonathan M. Vajda, J. Neil Otte, Cooper Stansbury, Marcelline R. Harris, Frank J. Manion, Cui Tao:
Refactoring and Expanding the Informed Consent Ontology (ICO). AMIA 2019 - [c101]