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2020 – today
- 2024
[j14]Qijun Liu, Diana Arguijo Mendoza, Alperen Yasar, Dilara Caygara, Aya Kassem, Douglas Densmore, Rabia Tugce Yazicigil:
Integrated Real-Time CMOS Luminescence Sensing and Impedance Spectroscopy in Droplet Microfluidics. IEEE Trans. Biomed. Circuits Syst. 18(6): 1233-1252 (2024)- [c17]Qijun Liu, Diana Arguijo Mendoza, Alperen Yasar, Dilara Caygara, Aya Kassem, Douglas Densmore, Rabia Tugce Yazicigil:
17.7 Droplet Microfluidics Co-Designed with Real-Time CMOS Luminescence Sensing and Impedance Spectroscopy of 4nL Droplets at a 67mm/s Velocity. ISSCC 2024: 326-328 - 2023
- [j13]Rishab Jain
, Aditya Jain, Elizabeth Mauro, Kevin LeShane, Douglas Densmore:
ICOR: improving codon optimization with recurrent neural networks. BMC Bioinform. 24(1): 132 (2023) - [j12]Douglas Densmore, Nathan J. Hillson, Eric Klavins, Chris J. Myers, Jean Peccoud, Giovanni Stracquadanio:
Introduction to the Special Issue on BioFoundries and Cloud Laboratories. ACM J. Emerg. Technol. Comput. Syst. 19(3): 26:1-26:2 (2023) - [j11]Casey-Tyler Berezin, Luis U. Aguilera, Sonja Billerbeck, Philip E. Bourne, Douglas Densmore, Paul S. Freemont, Thomas E. Gorochowski, Sarah I. Hernandez, Nathan J. Hillson, Connor R. King, Michael Köpke, Shuyi Ma, Katie M. Miller, Tae Seok Moon, Jason H. Moore, Brian Munsky, Chris J. Myers, Dequina A. Nicholas, Samuel J. Peccoud, Wen Zhou, Jean Peccoud:
Ten simple rules for managing laboratory information. PLoS Comput. Biol. 19(12) (2023)
2010 – 2019
- 2019
- [j10]Tramy Nguyen, Timothy S. Jones, Pedro Fontanarrosa, Jeanet V. Mante, Zach Zundel, Douglas Densmore, Chris J. Myers:
Design of Asynchronous Genetic Circuits. Proc. IEEE 107(7): 1356-1368 (2019) - [c16]Radhakrishna Sanka, Brian Crites, Jeffrey McDaniel, Philip Brisk, Douglas Densmore:
Specification, Integration, and Benchmarking of Continuous Flow Microfluidic Devices: Invited Paper. ICCAD 2019: 1-8 - 2018
- [j9]Ali Lashkaripour, Masoud Goharimanesh, Ali Abouei Mehrizi, Douglas Densmore:
An adaptive neural-fuzzy approach for microfluidic droplet size prediction. Microelectron. J. 78: 73-80 (2018) - [c15]Curtis Madsen, Prashant Vaidyanathan, Sadra Sadraddini, Cristian Ioan Vasile, Nicholas A. DeLateur, Ron Weiss, Douglas Densmore, Calin Belta:
Metrics for Signal Temporal Logic Formulae. CDC 2018: 1542-1547 - [c14]Brian Crites, Radhakrishna Sanka, Joshua Lippai, Jeffrey McDaniel, Philip Brisk, Douglas Densmore:
ParchMint: A Microfluidics Benchmark Suite. IISWC 2018: 78-79 - [i1]Curtis Madsen, Prashant Vaidyanathan, Sadra Sadraddini, Cristian Ioan Vasile, Nicholas A. DeLateur, Ron Weiss, Douglas Densmore, Calin Belta:
Metrics for Signal Temporal Logic Formulae. CoRR abs/1808.03315 (2018) - 2017
- [c13]Prashant Vaidyanathan, Rachael Ivison, Giuseppe Bombara, Nicholas A. DeLateur, Ron Weiss, Douglas Densmore, Calin Belta:
Grid-based temporal logic inference. CDC 2017: 5354-5359 - 2015
- [j8]Prashant Vaidyanathan, Bryan S. Der, Swapnil Bhatia, Nicholas Roehner, Ryan Silva, Christopher A. Voigt, Douglas Densmore:
A Framework for Genetic Logic Synthesis. Proc. IEEE 103(11): 2196-2207 (2015) - 2014
- [j7]Ernst Oberortner, Swapnil Bhatia, Erik Lindgren, Douglas Densmore:
A Rule-Based Design Specification Language for Synthetic Biology. ACM J. Emerg. Technol. Comput. Syst. 11(3): 25:1-25:19 (2014) - [j6]Haiyao Huang, Douglas Densmore:
Fluigi: Microfluidic Device Synthesis for Synthetic Biology. ACM J. Emerg. Technol. Comput. Syst. 11(3): 26:1-26:19 (2014) - [j5]Orit Shaer, Consuelo Valdes, Sirui Liu, Kara Lu, Kimberly Chang, Wendy Xu, Traci Haddock, Swapnil Bhatia, Douglas Densmore, Robert Kincaid:
Designing reality-based interfaces for experiential bio-design. Pers. Ubiquitous Comput. 18(6): 1515-1532 (2014) - 2013
- [j4]Abhijit Davare, Douglas Densmore, Liangpeng Guo, Roberto Passerone, Alberto L. Sangiovanni-Vincentelli, Alena Simalatsar, Qi Zhu:
metroII: A design environment for cyber-physical systems. ACM Trans. Embed. Comput. Syst. 12(1s): 49:1-49:31 (2013) - [c12]Orit Shaer, Consuelo Valdes, Sirui Liu, Kara Lu, Traci Haddock, Swapnil Bhatia, Douglas Densmore, Robert Kincaid:
MoClo planner: Interactive visualization for Modular Cloning bio-design. BioVis 2013: 57-64 - [c11]Ebru Aydin Gol, Douglas Densmore, Calin Belta:
Data-driven verification of synthetic gene networks. CDC 2013: 4074-4079 - 2012
- [j3]Douglas Densmore, Soha Hassoun:
Guest Editors' Introduction: Synthetic Biology. IEEE Des. Test Comput. 29(3): 5-6 (2012) - [j2]Douglas Densmore, Soha Hassoun:
Design Automation for Synthetic Biological Systems. IEEE Des. Test Comput. 29(3): 7-20 (2012) - [c10]Boyan Yordanov, Evan Appleton, Rishi Ganguly, Ebru Aydin Gol, Swati Banerjee Carr, Swapnil Bhatia, Traci Haddock, Calin Belta, Douglas Densmore:
Experimentally driven verification of synthetic biological circuits. DATE 2012: 236-241 - 2011
- [c9]Douglas Densmore, Mark Horowitz, Smita Krishnaswamy, Xiling Shen, Adam P. Arkin, Erik Winfree, Chris Voigt:
Joint DAC/IWBDA special session design and synthesis of biological circuits. DAC 2011: 114-115 - 2010
- [c8]Douglas Densmore, Joshua T. Kittleson, Lesia Bilitchenko, Adam Liu, J. Christopher Anderson:
Rule based constraints for the construction of genetic devices. ISCAS 2010: 557-560
2000 – 2009
- 2009
- [c7]Douglas Densmore, Alena Simalatsar, Abhijit Davare, Roberto Passerone, Alberto L. Sangiovanni-Vincentelli:
UMTS MPSoC design evaluation using a system level design framework. DATE 2009: 478-483 - [c6]Douglas Densmore, J. Christopher Anderson:
Combinational Logic Design in Synthetic Biology. ISCAS 2009: 301-304 - [c5]Douglas Densmore, Anne Van Devender, Matthew Johnson, Nade Sritanyaratana:
A platform-based design environment for synthetic biological systems. Richard Tapia Celebration of Diversity in Computing Conference 2009: 24-29 - 2008
- [c4]Alena Simalatsar, Roberto Passerone, Douglas Densmore:
A methodology for architecture exploration and performance analysis using system level design languages and rapid architecture profiling. SIES 2008: 95-102 - 2006
- [j1]Douglas Densmore, Roberto Passerone:
A Platform-Based Taxonomy for ESL Design. IEEE Des. Test Comput. 23(5): 359-374 (2006) - [c3]Shinjiro Kakita, Yosinori Watanabe, Douglas Densmore, Abhijit Davare, Alberto L. Sangiovanni-Vincentelli:
Functional Model Exploration for Multimedia Applications via Algebraic Operators. ACSD 2006: 229-238 - [c2]Douglas Densmore, Adam Donlin, Alberto L. Sangiovanni-Vincentelli:
FPGA architecture characterization for system level performance analysis. DATE 2006: 734-739 - 2004
- [c1]Douglas Densmore, Sanjay Rekhi, Alberto L. Sangiovanni-Vincentelli:
Microarchitecture Development via Metropolis Successive Platform Refinement. DATE 2004: 346-351
Coauthor Index
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