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Anand A. Joshi
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2020 – today
- 2024
- [c57]Haleh Akrami, Omar Zamzam, Anand A. Joshi, Sergül Aydöre, Richard M. Leahy:
Beta Quantile Regression for Robust Estimation of Uncertainty in the Presence of Outliers. ICASSP 2024: 7480-7484 - 2023
- [j19]Takfarinas Medani
, Juan Garcia-Prieto, François Tadel, Marios Antonakakis, Tim Erdbrügger, Malte Hoeltershinken
, Wayne Mead, Sophie Schrader, Anand A. Joshi, Christian Engwer, Carsten H. Wolters, John C. Mosher, Richard M. Leahy:
Brainstorm-DUNEuro: An integrated and user-friendly Finite Element Method for modeling electromagnetic brain activity. NeuroImage 267: 119851 (2023) - [c56]Yixue Feng, Bramsh Qamar Chandio, Julio E. Villalon-Reina, Sophia I. Thomopoulos, Himanshu Joshi, Gauthami Nair, Anand A. Joshi, Ganesan Venkatasubramanian, John P. John, Paul M. Thompson:
BundleCleaner: Unsupervised Denoising and Subsampling of Diffusion MRI-Derived Tractography Data. CDMRI@MICCAI 2023: 152-164 - [i13]Haleh Akrami, Omar Zamzam, Anand A. Joshi, Sergül Aydöre, Richard M. Leahy:
Beta quantile regression for robust estimation of uncertainty in the presence of outliers. CoRR abs/2309.07374 (2023) - [i12]Wenhui Cui, Woojae Jeong, Philipp Thölke, Takfarinas Medani, Karim Jerbi, Anand A. Joshi, Richard M. Leahy:
Neuro-GPT: Developing A Foundation Model for EEG. CoRR abs/2311.03764 (2023) - [i11]Wenhui Cui, Haleh Akrami, Ganning Zhao, Anand A. Joshi, Richard M. Leahy:
Meta Transfer of Self-Supervised Knowledge: Foundation Model in Action for Post-Traumatic Epilepsy Prediction. CoRR abs/2312.14204 (2023) - 2022
- [j18]Haleh Akrami
, Anand A. Joshi
, Jian Li
, Sergül Aydöre, Richard M. Leahy
:
A robust variational autoencoder using beta divergence. Knowl. Based Syst. 238: 107886 (2022) - [c55]Jianan Cui, Yutong Xie, Anand A. Joshi, Kuang Gong, Kyung Sang Kim, Young-Don Son, Jong Hoon Kim, Richard M. Leahy, Huafeng Liu, Quanzheng Li:
PET Denoising and Uncertainty Estimation Based on NVAE Model Using Quantile Regression Loss. MICCAI (4) 2022: 173-183 - [i10]Wenhui Cui, Haleh Akrami, Anand A. Joshi, Richard M. Leahy:
Semi-supervised Learning using Robust Loss. CoRR abs/2203.01524 (2022) - [i9]Haleh Akrami, Wenhui Cui, Anand A. Joshi, Richard M. Leahy:
Learning from imperfect training data using a robust loss function: application to brain image segmentation. CoRR abs/2208.04941 (2022) - [i8]Hedong Zhang, Anand A. Joshi:
Semi-supervised Learning with Robust Loss in Brain Segmentation. CoRR abs/2212.03082 (2022) - [i7]Wenhui Cui, Haleh Akrami, Anand A. Joshi, Richard M. Leahy:
Toward Improved Generalization: Meta Transfer of Self-supervised Knowledge on Graphs. CoRR abs/2212.08217 (2022) - 2021
- [j17]Jian Li
, Jessica L. Wisnowski
, Anand A. Joshi, Richard M. Leahy:
Robust brain network identification from multi-subject asynchronous fMRI data. NeuroImage 227: 117615 (2021) - [c54]Haleh Akrami, Anand A. Joshi, Sergül Aydöre, Richard M. Leahy:
Quantile Regression for Uncertainty Estimation in VAEs with Applications to Brain Lesion Detection. IPMI 2021: 689-700 - [c53]Haleh Akrami, Andrei Irimia, Wenhui Cui, Anand A. Joshi, Richard M. Leahy:
Prediction of posttraumatic epilepsy using machine learning. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging 2021 - [c52]Anand A. Joshi, Soyoung Choi, Jian Li, Haleh Akrami, Richard M. Leahy:
A pairwise approach for fMRI group studies using the BrainSync Transform. Medical Imaging: Image Processing 2021 - [c51]Shashank N. Sridhara, Haleh Akrami, Vaishnavi Krishnamurthy, Anand A. Joshi:
Bias field correction in 3D-MRIs using convolutional autoencoders. Medical Imaging: Image Processing 2021 - [i6]Haleh Akrami, Anand A. Joshi, Sergül Aydöre, Richard M. Leahy:
Deep Quantile Regression for Uncertainty Estimation in Unsupervised and Supervised Lesion Detection. CoRR abs/2109.09374 (2021) - 2020
- [j16]Jian Li
, Soyoung Choi, Anand A. Joshi
, Jessica L. Wisnowski, Richard M. Leahy:
Temporal non-local means filtering for studies of intrinsic brain connectivity from individual resting fMRI. Medical Image Anal. 61: 101635 (2020) - [c50]Jian Li, Anand A. Joshi, Richard M. Leahy:
A Network-Based Approach to Study of Adhd Using Tensor Decomposition of Resting State Fmri Data. ISBI 2020: 1-5 - [c49]Haleh Akrami, Anand A. Joshi, Jian Li, Sergül Aydöre, Richard M. Leahy:
Brain Lesion Detection Using A Robust Variational Autoencoder and Transfer Learning. ISBI 2020: 786-790 - [i5]Haleh Akrami, Sergül Aydöre, Richard M. Leahy, Anand A. Joshi:
Robust Variational Autoencoder for Tabular Data with Beta Divergence. CoRR abs/2006.08204 (2020) - [i4]Haleh Akrami, Anand A. Joshi, Sergül Aydöre, Richard M. Leahy:
Addressing Variance Shrinkage in Variational Autoencoders using Quantile Regression. CoRR abs/2010.09042 (2020) - [i3]Takfarinas Medani, Juan Garcia-Prieto, François Tadel, Sophie Schrader, Anand A. Joshi, Christian Engwer, Carsten H. Wolters, John C. Mosher, Richard M. Leahy:
Realistic head modeling of electromagnetic brain activity: An integrated Brainstorm pipeline from MRI data to the FEM solution. CoRR abs/2011.01292 (2020) - [i2]Anand A. Joshi, Soyoung Choi, Haleh Akrami, Richard M. Leahy:
fMRI-Kernel Regression: A Kernel-based Method for Pointwise Statistical Analysis of rs-fMRI for Population Studies. CoRR abs/2012.06972 (2020)
2010 – 2019
- 2019
- [c48]Anand A. Joshi, Haleh Akrami, Jian Li, Richard M. Leahy:
A Matched Filter Decomposition of fMRI into Resting and Task Components. MICCAI (3) 2019: 673-681 - [c47]Jian Li, Jessica L. Wisnowski, Anand A. Joshi, Richard M. Leahy:
Brain network identification in asynchronous task fMRI data using robust and scalable tensor decomposition. Medical Imaging: Image Processing 2019: 109490N - [c46]Haleh Akrami, Anand A. Joshi, Jian Li, Richard M. Leahy:
Group-wise alignment of resting fMRI in space and time. Medical Imaging: Image Processing 2019: 109492W - [c45]Anand A. Joshi, Jian Li, Haleh Akrami, Richard M. Leahy:
Predicting cognitive scores from resting fMRI data and geometric features of the brain. Medical Imaging: Image Processing 2019: 109492E - [i1]Haleh Akrami, Anand A. Joshi, Jian Li, Richard M. Leahy:
Robust Variational Autoencoder. CoRR abs/1905.09961 (2019) - 2018
- [j15]Brent Foster, Anand A. Joshi
, Marissa Borgese, Yasser Abdelhafez
, Robert D. Boutin, Abhijit J. Chaudhari:
WRIST: A WRist Image Segmentation Toolkit for carpal bone delineation from MRI. Comput. Medical Imaging Graph. 63: 31-40 (2018) - [j14]Anand A. Joshi
, Minqi Chong, Jian Li
, Soyoung Choi
, Richard M. Leahy:
Are you thinking what I'm thinking? Synchronization of resting fMRI time-series across subjects. NeuroImage 172: 740-752 (2018) - [c44]Jian Li, Soyoung Choi
, Anand A. Joshi
, Jessica L. Wisnowski, Richard M. Leahy:
Global PDF-based temporal non-local means filtering reveals individual differences in brain connectivity. ISBI 2018: 15-19 - [c43]Anand A. Joshi
, Jian Li, Minqi Chong, Haleh Akrami, Richard M. Leahy:
rfDemons: Resting fMRI-Based Cortical Surface Registration Using the BrainSync Transform. MICCAI (3) 2018: 198-205 - [c42]Anand A. Joshi
, Chitresh Bhushan
, Ronald Salloum, Jessica L. Wisnowski, David W. Shattuck, Richard M. Leahy:
Using the Anisotropic Laplace Equation to Compute Cortical Thickness. MICCAI (3) 2018: 549-556 - 2017
- [j13]Minqi Chong, Chitresh Bhushan
, Anand A. Joshi
, Soyoung Choi
, Justin P. Haldar, David W. Shattuck, R. Nathan Spreng
, Richard M. Leahy:
Individual parcellation of resting fMRI with a group functional connectivity prior. NeuroImage 156: 87-100 (2017) - [c41]Suyash P. Awate
, Richard M. Leahy, Anand A. Joshi
:
Kernel Methods for Riemannian Analysis of Robust Descriptors of the Cerebral Cortex. IPMI 2017: 28-40 - [c40]Rosita Shishegar, Anand A. Joshi
, Mary Tolcos
, David W. Walker, Leigh A. Johnston:
Automatic segmentation of fetal brain using diffusion-weighted imaging cues. ISBI 2017: 804-807 - [c39]Anand A. Joshi
, Minqi Chong, Richard M. Leahy:
BrainSync: An Orthogonal Transformation for Synchronization of fMRI Data Across Subjects. MICCAI (1) 2017: 486-494 - [c38]Anand A. Joshi
, Soyoung Choi
, Gaurav Sonkar, Minqi Chong, Jorge Gonzalez-Martinez, Dileep Nair, David W. Shattuck, Hanna Damasio, Richard M. Leahy:
A whole brain atlas with sub-parcellation of cortical gyri using resting fMRI. Medical Imaging: Image Processing 2017: 101330O - [c37]Gautham Rajagopal, Anand A. Joshi
, Richard M. Leahy:
An algorithm for automatic parameter adjustment for brain extraction in BrainSuite. Medical Imaging: Image Processing 2017: 101330K - 2016
- [j12]Carl Lederman
, Anand A. Joshi, Ivo D. Dinov
, John Darrell Van Horn, Luminita A. Vese, Arthur W. Toga:
A Unified Variational Volume Registration Method Based on Automatically Learned Brain Structures. J. Math. Imaging Vis. 55(2): 179-198 (2016) - [j11]Anand A. Joshi
, Richard M. Leahy, Ramsey Derek Badawi, Abhijit J. Chaudhari:
Registration-Based Morphometry for Shape Analysis of the Bones of the Human Wrist. IEEE Trans. Medical Imaging 35(2): 416-426 (2016) - [c36]Suyash P. Awate
, Richard M. Leahy, Anand A. Joshi
:
Riemannian Statistical Analysis of Cortical Geometry with Robustness to Partial Homology and Misalignment. MICCAI (1) 2016: 237-246 - 2015
- [j10]Chitresh Bhushan
, Justin P. Haldar
, Soyoung Choi
, Anand A. Joshi
, David W. Shattuck, Richard M. Leahy:
Co-registration and distortion correction of diffusion and anatomical images based on inverse contrast normalization. NeuroImage 115: 269-280 (2015) - [j9]Jie Shi
, Olivier Collignon, Liang Xu, Gang Wang, Yue Kang, Franco Leporé, Yi Lao, Anand A. Joshi, Natasha Leporé, Yalin Wang
:
Impact of Early and Late Visual Deprivation on the Structure of the Corpus Callosum: A Study Combining Thickness Profile with Surface Tensor-Based Morphometry. Neuroinformatics 13(3): 321-336 (2015) - [c35]Anand A. Joshi
, Ronald Salloum, Chitresh Bhushan
, Richard M. Leahy:
Measuring Asymmetric Interactions in Resting State Brain Networks. IPMI 2015: 399-410 - 2014
- [c34]Kristian M. Eschenburg, Julio Villalon-Reina, Neda Jahanshad, Talia M. Nir
, Madelaine Daianu, Anand A. Joshi, Cassandra D. Leonardo, Stella de Bode, Susan Y. Bookheimer, Noriko Salamon, Paul M. Thompson
:
Analysis of structural brain connectivity in 6 cases of hemispherectomy. ISBI 2014: 706-709 - [c33]Kenia Martínez
, Anand A. Joshi
, Sarah K. Madsen, Shantanu H. Joshi, Sherif Karama, Francisco J. Román, Julio Villalon-Reina, Miguel Burgaleta
, Paul M. Thompson
, Roberto Colom:
Reproducibility of brain-cognition relationships using different cortical surface-based analysis protocols. ISBI 2014: 1019-1022 - 2013
- [j8]Syed Ashrafulla, Justin P. Haldar
, Anand A. Joshi
, Richard M. Leahy:
Canonical granger causality between regions of interest. NeuroImage 83: 189-199 (2013) - [c32]Sergül Aydöre, Syed Ashrafulla, Anand A. Joshi
, Richard M. Leahy:
A measure of connectivity in the presence of crosstalk. ACSSC 2013: 1848-1852 - [c31]Anand A. Joshi
, Richard M. Leahy, Ramsey Derek Badawi, Abhijit J. Chaudhari:
Morphometry for early monitoring of treatment response in rheumatoid arthritis. ISBI 2013: 121-124 - [c30]Kenia Martínez
, Julio Villalon-Reina, Dominique Kessel
, Anand A. Joshi, José Angel Pineda-Pardo, Neda Jahanshad, Talia M. Nir, Kristian M. Eschenburg, Francisco J. Román, Miguel Burgaleta
, Ana Beatriz Solana
, M. Ángeles Quiroga, Roberto Colom, Paul M. Thompson:
Exploratory factor analysis of brain networks reveals sub-networks related to cognitive performance. ISBI 2013: 608-611 - 2012
- [j7]Shantanu H. Joshi, Ryan P. Cabeen, Anand A. Joshi
, Bo Sun, Ivo D. Dinov
, Katherine L. Narr, Arthur W. Toga, Roger P. Woods:
Diffeomorphic Sulcal Shape Analysis on the Cortex. IEEE Trans. Medical Imaging 31(6): 1195-1212 (2012) - [c29]Chitresh Bhushan, Justin P. Haldar, Anand A. Joshi, Richard M. Leahy:
Correcting susceptibility-induced distortion in diffusion-weighted MRI using constrained nonrigid registration. APSIPA 2012: 1-9 - [c28]Shantanu H. Joshi, Anand A. Joshi
, Boris Gutman, Arthur W. Toga, Katie McMahon, Greig I. de Zubicaray
, Nicholas G. Martin
, Margaret J. Wright
, Paul M. Thompson
:
Genetic influences on sulcal patterns of the brain. ISBI 2012: 414-417 - [c27]Anand A. Joshi
, David W. Shattuck, Hanna Damasio, Richard M. Leahy:
Geodesic curvature flow on surfaces for automatic sulcal delineation. ISBI 2012: 430-433 - [c26]David Wheland, Anand A. Joshi, Katie McMahon, Narelle K. Hansell
, Nicholas G. Martin
, Margaret J. Wright
, Paul M. Thompson, David W. Shattuck, Richard M. Leahy:
Robust identification of partial-correlation based networks with applications to cortical thickness data. ISBI 2012: 1551-1554 - [c25]Syed Ashrafulla, Justin P. Haldar
, Anand A. Joshi
, Richard M. Leahy:
Canonical Granger causality applied to functional brain data. ISBI 2012: 1751-1754 - [c24]Anand A. Joshi, Syed Ashrafulla, David W. Shattuck, Hanna Damasio, Richard M. Leahy:
An Invariant Shape Representation Using the Anisotropic Helmholtz Equation. MICCAI (3) 2012: 607-614 - [c23]Anand A. Joshi
, David W. Shattuck, Richard M. Leahy:
A Method for Automated Cortical Surface Registration and Labeling. WBIR 2012: 180-189 - [c22]Sangeetha Somayajula, Anand A. Joshi
, Richard M. Leahy:
Non-rigid Image Registration Using Gaussian Mixture Models. WBIR 2012: 286-295 - 2011
- [j6]Carl Lederman
, Anand A. Joshi, Ivo D. Dinov
, Luminita A. Vese, Arthur W. Toga, John Darrell Van Horn:
The generation of tetrahedral mesh models for neuroanatomical MRI. NeuroImage 55(1): 153-164 (2011) - [j5]Moriah E. Thomason, Emily L. Dennis, Anand A. Joshi
, Shantanu H. Joshi, Ivo D. Dinov
, Catie Chang, Melissa L. Henry, Rebecca F. Johnson, Paul M. Thompson
, Arthur W. Toga, Gary H. Glover, John D. Van Horn, Ian H. Gotlib:
Resting-state fMRI can reliably map neural networks in children. NeuroImage 55(1): 165-175 (2011) - [c21]Anand A. Joshi
, Shantanu H. Joshi, Moriah E. Thomason
, Ivo D. Dinov
, Arthur W. Toga:
Evaluation of connectivity measures and anatomical features for statistical brain networks. ISBI 2011: 836-840 - [c20]Neda Jahanshad, Iman Aganj
, Christophe Lenglet
, Anand A. Joshi, Yan Jin
, Marina Barysheva, Katie McMahon, Greig I. de Zubicaray
, Nicholas G. Martin
, Margaret J. Wright
, Arthur W. Toga, Guillermo Sapiro, Paul M. Thompson
:
Sex differences in the human connectome: 4-Tesla high angular resolution diffusion imaging (HARDI) tractography in 234 young adult twins. ISBI 2011: 939-943 - [c19]Julio Villalon, Anand A. Joshi
, Natasha Leporé, Caroline C. Brun, Arthur W. Toga, Paul M. Thompson
:
Comparison of volumetric registration algorithms for tensor-based morphometry. ISBI 2011: 1536-1541 - [c18]Gautam Prasad, Anand A. Joshi
, Paul M. Thompson
, Arthur W. Toga, David W. Shattuck, Demetri Terzopoulos:
Skull-stripping with deformable organisms. ISBI 2011: 1662-1665 - 2010
- [j4]Dimitrios Pantazis
, Anand A. Joshi
, Jintao Jiang, David W. Shattuck, Lynne E. Bernstein, Hanna Damasio, Richard M. Leahy:
Comparison of landmark-based and automatic methods for cortical surface registration. NeuroImage 49(3): 2479-2493 (2010) - [j3]Anand A. Joshi
, Dimitrios Pantazis, Quanzheng Li, Hanna Damasio, David W. Shattuck, Arthur W. Toga, Richard M. Leahy:
Sulcal set optimization for cortical surface registration. NeuroImage 50(3): 950-959 (2010) - [c17]Shantanu H. Joshi, Ryan P. Cabeen, Anand A. Joshi
, Roger P. Woods, Katherine L. Narr, Arthur W. Toga:
Diffeomorphic sulcal shape analysis for cortical surface registration. CVPR 2010: 475-482 - [c16]Anand A. Joshi
, Natasha Leporé, Shantanu H. Joshi, Agatha D. Lee, Marina Barysheva, Greig I. de Zubicaray
, Margaret J. Wright
, Katie McMahon, Arthur W. Toga, Paul M. Thompson
:
A genetic analysis of cortical thickness in 372 twins. ISBI 2010: 101-104 - [c15]Carl Lederman
, Anand A. Joshi
, Ivo D. Dinov
, John D. Van Horn, Luminita A. Vese, Arthur W. Toga:
Tetrahedral mesh generation for medical images with multiple regions using active surfaces. ISBI 2010: 436-439 - [c14]Anand A. Joshi
, Shantanu H. Joshi, Ivo D. Dinov
, David W. Shattuck, Richard M. Leahy, Arthur W. Toga:
Anatomical structural network analysis of human brain using partial correlations of gray matter volumes. ISBI 2010: 844-847 - [c13]Shantanu H. Joshi, Ryan P. Cabeen, Bo Sun, Anand A. Joshi
, Boris Gutman, Alen Zamanyan, Shruthi Chakrapani, Ivo D. Dinov
, Roger P. Woods, Arthur W. Toga:
Cortical Sulcal Atlas Construction Using a Diffeomorphic Mapping Approach. MICCAI (1) 2010: 357-366 - [c12]Natasha Leporé, Anand A. Joshi
, Richard M. Leahy, Caroline C. Brun, Yi-Yu Chou, Xavier Pennec
, Agatha D. Lee, Marina Barysheva, Greig I. de Zubicaray
, Margaret J. Wright
, Katie L. McMahon, Arthur W. Toga, Paul M. Thompson
:
A new combined surface and volume registration. Medical Imaging: Image Processing 2010: 76231E
2000 – 2009
- 2009
- [j2]Anand A. Joshi, David W. Shattuck, Paul M. Thompson
, Richard M. Leahy:
A Parameterization-Based Numerical Method for Isotropic and Anisotropic Diffusion Smoothing on Non-Flat Surfaces. IEEE Trans. Image Process. 18(6): 1358-1365 (2009) - [c11]Anand A. Joshi
, David W. Shattuck, Dimitrios Pantazis, Quanzheng Li, Hanna Damasio, Richard M. Leahy:
Optimization of landmark selection for cortical surface registration. CVPR 2009: 699-706 - [c10]Anand A. Joshi
, Richard M. Leahy, Arthur W. Toga, David W. Shattuck:
A Framework for Brain Registration via Simultaneous Surface and Volume Flow. IPMI 2009: 576-588 - [c9]Anand A. Joshi, Abhijit J. Chaudhari, Changqing Li
, David W. Shattuck, Joyita Dutta
, Richard M. Leahy, Arthur W. Toga:
Posture Matching and Elastic Registration of a Mouse Atlas to Surface Topography Range Data. ISBI 2009: 366-369 - [c8]Joyita Dutta
, Sangtae Ahn, Anand A. Joshi
, Richard M. Leahy:
Optimal Illumination Patterns for Fluorescence Tomography. ISBI 2009: 1275-1278 - 2008
- [c7]Sangeetha Somayajula, Anand A. Joshi
, Richard M. Leahy:
Mutual information based non-rigidmouse registration using a scale-space approach. ISBI 2008: 1147-1150 - 2007
- [j1]Anand A. Joshi
, David W. Shattuck, Paul M. Thompson
, Richard M. Leahy:
Surface-Constrained Volumetric Brain Registration Using Harmonic Mappings. IEEE Trans. Medical Imaging 26(12): 1657-1669 (2007) - [c6]Anand A. Joshi
, David W. Shattuck, Paul M. Thompson
, Richard M. Leahy:
Simultaneous surface and volumetric registration using harmonic maps. Computational Imaging 2007: 649816 - [c5]Anand A. Joshi
, David W. Shattuck, Paul M. Thompson, Richard M. Leahy:
Brain Image Registration Using Cortically Constrained Harmonic Mappings. IPMI 2007: 359-371 - [c4]Anand A. Joshi
, David W. Shattuck, Paul M. Thompson
, Richard M. Leahy:
A Finite Element Method for Elastic Parameterization and Alignment of Cortical Surfaces Using Sulcal Constraints. ISBI 2007: 640-643 - [c3]Ilya Eckstein, Anand A. Joshi
, C.-C. Jay Kuo
, Richard M. Leahy, Mathieu Desbrun:
Generalized Surface Flows for Deformable Registration and Cortical Matching. MICCAI (1) 2007: 692-700 - 2005
- [c2]Anand A. Joshi
, David W. Shattuck, Paul M. Thompson
, Richard M. Leahy:
A Framework for Registration, Statistical Characterization and Classification of Cortically Constrained Functional Imaging Data. IPMI 2005: 186-196 - 2004
- [c1]Anand A. Joshi
, Richard M. Leahy, Paul M. Thompson
, David W. Shattuck:
Cortical Surface Parameterization by P-Harmonic Energy Minimization. ISBI 2004: 428-431
Coauthor Index
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