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Joanne Berghout
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2020 – today
- 2021
- [j7]Dillon Aberasturi, Nima Pouladi, Samir Rachid Zaim
, Colleen Kenost, Joanne Berghout
, Walter W. Piegorsch, Yves A. Lussier
:
'Single-subject studies'-derived analyses unveil altered biomechanisms between very small cohorts: implications for rare diseases. Bioinform. 37(Supplement): 67-75 (2021) - [c6]Olga Afanasiev, Joanne Berghout, Steven E. Brenner, Martha L. Bulyk, Dana C. Crawford, Jonathan H. Chen, Roxana Daneshjou, Lukasz Kidzinski:
Computational Challenges and Artificial Intelligence in Precision Medicine. PSB 2021 - 2020
- [j6]Samir Rachid Zaim
, Colleen Kenost, Joanne Berghout
, Wesley Chiu
, Liam Wilson, Hao Helen Zhang, Yves A. Lussier
:
binomialRF: interpretable combinatoric efficiency of random forests to identify biomarker interactions. BMC Bioinform. 21(1): 374 (2020) - [j5]Samir Rachid Zaim, Colleen Kenost, Joanne Berghout
, Wesley Chiu, Liam Wilson, Hao Helen Zhang, Yves A. Lussier:
Correction to: binomialRF: interpretable combinatoric efficiency of random forests to identify biomarker interactions. BMC Bioinform. 21(1): 495 (2020)
2010 – 2019
- 2019
- [j4]Francesca Vitali
, Qike Li
, A. Grant Schissler
, Joanne Berghout
, Colleen Kenost, Yves A. Lussier
:
Developing a 'personalome' for precision medicine: emerging methods that compute interpretable effect sizes from single-subject transcriptomes. Briefings Bioinform. 20(3): 789-805 (2019) - [c5]Qike Li, Samir Rachid Zaim, Dillon Aberasturi, Joanne Berghout, Haiquan Li, Francesca Vitali, Colleen Kenost, Hao Helen Zhang, Yves A. Lussier:
Interpretation of 'Omics dynamics in a single subject using local estimates of dispersion between two transcriptomes. AMIA 2019 - [c4]Francesca Vitali, Joanne Berghout, Jung-wei Fan, Jianrong Li, Qike Li, Haiquan Li, Yves A. Lussier:
Precision drug repurposing via convergent eQTL-based molecules and pathway targeting independent disease-associated polymorphisms. PSB 2019: 308-319 - [c3]Joanne Berghout, Yves A. Lussier, Francesca Vitali, Martha L. Bulyk, Maricel G. Kann, Jason H. Moore:
Reading between the genes: interpreting non-coding DNA in high-throughput. PSB 2019: 444-448 - 2018
- [c2]Joanne Berghout, Qike Li, Nima Pouladi, Jianrong Li, Yves A. Lussier:
Single subject transcriptome analysis to identify functionally signed gene set or pathway activity. PSB 2018: 400-411 - [c1]Yves A. Lussier, Joanne Berghout, Francesca Vitali, Kenneth S. Ramos, Maricel G. Kann, Jason H. Moore:
Session Introduction. PSB 2018: 507-511 - 2017
- [j3]Vincent Gardeux
, Joanne Berghout
, Ikbel Achour, A. Grant Schissler
, Qike Li, Colleen Kenost, Jianrong Li, Yuan Shang
, Anthony Bosco
, Donald Saner, Marilyn J. Halonen, Daniel Jackson, Haiquan Li
, Fernando D. Martinez, Yves A. Lussier
:
A genome-by-environment interaction classifier for precision medicine: personal transcriptome response to rhinovirus identifies children prone to asthma exacerbations. J. Am. Medical Informatics Assoc. 24(6): 1116-1126 (2017) - [j2]Qike Li
, A. Grant Schissler
, Vincent Gardeux
, Joanne Berghout
, Ikbel Achour, Colleen Kenost, Haiquan Li
, Hao Helen Zhang, Yves A. Lussier
:
kMEn: Analyzing noisy and bidirectional transcriptional pathway responses in single subjects. J. Biomed. Informatics 66: 32-41 (2017) - 2014
- [j1]Constance M. Smith
, Jacqueline H. Finger, Terry F. Hayamizu, Ingeborg J. McCright, Jingxia Xu, Joanne Berghout
, Jeff Campbell, Lori E. Corbani, Kim L. Forthofer, Pete J. Frost, Dave Miers, David R. Shaw, Kevin R. Stone, Janan T. Eppig, James A. Kadin, Joel E. Richardson, Martin Ringwald:
The mouse Gene Expression Database (GXD): 2014 update. Nucleic Acids Res. 42(Database-Issue): 818-824 (2014)
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last updated on 2024-04-25 05:45 CEST by the dblp team
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