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2020 – today
- 2023
[j7]Qiang Ma
, Liu Li, Emma C. Robinson, Bernhard Kainz, Daniel Rueckert, Amir Alansary:
CortexODE: Learning Cortical Surface Reconstruction by Neural ODEs. IEEE Trans. Medical Imaging 42(2): 430-443 (2023)- 2022
- [c23]Liu Li, Qiang Ma, Zeju Li, Cheng Ouyang, Weitong Zhang, Anthony Price, Vanessa Kyriakopoulou, Lucilio Cordero-Grande, Antonios Makropoulos, Joseph V. Hajnal, Daniel Rueckert, Bernhard Kainz, Amir Alansary:
Fetal Cortex Segmentation with Topology and Thickness Loss Constraints. EPIMI/ML-CDS@MICCAI 2022: 123-133 - [i21]Qiang Ma, Liu Li, Emma C. Robinson, Bernhard Kainz, Daniel Rueckert, Amir Alansary:
CortexODE: Learning Cortical Surface Reconstruction by Neural ODEs. CoRR abs/2202.08329 (2022) - [i20]George-Liviu Pereteanu, Amir Alansary, Jonathan Passerat-Palmbach:
Split HE: Fast Secure Inference Combining Split Learning and Homomorphic Encryption. CoRR abs/2202.13351 (2022) - [i19]Liu Li, Qiang Ma, Matthew Sinclair, Antonios Makropoulos, Joseph V. Hajnal, A. David Edwards, Bernhard Kainz, Daniel Rueckert, Amir Alansary:
CAS-Net: Conditional Atlas Generation and Brain Segmentation for Fetal MRI. CoRR abs/2205.08239 (2022) - 2021
- [c22]Qiang Ma, Emma C. Robinson, Bernhard Kainz, Daniel Rueckert, Amir Alansary:
PialNN: A Fast Deep Learning Framework for Cortical Pial Surface Reconstruction. MLCN@MICCAI 2021: 73-81 - [c21]Liu Li, Matthew Sinclair, Antonios Makropoulos, Joseph V. Hajnal, A. David Edwards, Bernhard Kainz, Daniel Rueckert, Amir Alansary:
CAS-Net: Conditional Atlas Generation and Brain Segmentation for Fetal MRI. UNSURE/PIPPI@MICCAI 2021: 221-230 - [i18]Loïc Le Folgoc, Vasileios Baltatzis, Amir Alansary, Sujal Desai, Anand Devaraj, Sam Ellis, Octavio E. Martinez Manzanera, Fahdi Kanavati, Arjun Nair, Julia A. Schnabel, Ben Glocker:
Bayesian analysis of the prevalence bias: learning and predicting from imbalanced data. CoRR abs/2108.00250 (2021) - [i17]Stefán Páll Sturluson, Samuel Trew, Luis Muñoz-González, Matei Grama, Jonathan Passerat-Palmbach, Daniel Rueckert, Amir Alansary:
FedRAD: Federated Robust Adaptive Distillation. CoRR abs/2112.01405 (2021) - 2020
- [c20]Vitalis Vosylius, Andy Wang, Cemlyn Waters, Alexey Zakharov, Francis Ward, Loïc Le Folgoc, John Cupitt, Antonios Makropoulos, Andreas Schuh, Daniel Rueckert, Amir Alansary:
Geometric Deep Learning for Post-Menstrual Age Prediction Based on the Neonatal White Matter Cortical Surface. UNSURE/GRAIL@MICCAI 2020: 174-186 - [c19]Guy Leroy, Daniel Rueckert, Amir Alansary:
Communicative Reinforcement Learning Agents for Landmark Detection in Brain Images. MLCN/RNO-AI@MICCAI 2020: 177-186 - [c18]Ahmed E. Fetit, Amir Alansary, Lucilio Cordero-Grande, John Cupitt, Alice B. Davidson, A. David Edwards, Joseph V. Hajnal, Emer J. Hughes, Konstantinos Kamnitsas, Vanessa Kyriakopoulou, Antonios Makropoulos, Prachi A. Patkee, Anthony N. Price, Mary A. Rutherford, Daniel Rueckert:
A deep learning approach to segmentation of the developing cortex in fetal brain MRI with minimal manual labeling. MIDL 2020: 241-261 - [i16]Loïc Le Folgoc, Vasileios Baltatzis, Amir Alansary, Sujal Desai, Anand Devaraj, Sam Ellis, Octavio E. Martinez Manzanera, Fahdi Kanavati, Arjun Nair, Julia A. Schnabel, Ben Glocker:
Bayesian Sampling Bias Correction: Training with the Right Loss Function. CoRR abs/2006.13798 (2020) - [i15]Vitalis Vosylius, Andy Wang, Cemlyn Waters, Alexey Zakharov, Francis Ward, Loïc Le Folgoc, John Cupitt, Antonios Makropoulos, Andreas Schuh, Daniel Rueckert, Amir Alansary:
Geometric Deep Learning for Post-Menstrual Age Prediction based on the Neonatal White Matter Cortical Surface. CoRR abs/2008.06098 (2020) - [i14]Guy Leroy, Daniel Rueckert, Amir Alansary:
Communicative Reinforcement Learning Agents for Landmark Detection in Brain Images. CoRR abs/2008.08055 (2020) - [i13]Matei Grama, Maria Musat, Luis Muñoz-González, Jonathan Passerat-Palmbach, Daniel Rueckert, Amir Alansary:
Robust Aggregation for Adaptive Privacy Preserving Federated Learning in Healthcare. CoRR abs/2009.08294 (2020)
2010 – 2019
- 2019
- [j6]Amir Alansary, Ozan Oktay, Yuanwei Li, Loïc Le Folgoc, Benjamin Hou, Ghislain Vaillant, Konstantinos Kamnitsas, Athanasios Vlontzos, Ben Glocker, Bernhard Kainz, Daniel Rueckert:
Evaluating reinforcement learning agents for anatomical landmark detection. Medical Image Anal. 53: 156-164 (2019) - [c17]Loïc Le Folgoc, Daniel Coelho de Castro, Jeremy Tan, Bishesh Khanal, Konstantinos Kamnitsas, Ian Walker, Amir Alansary, Ben Glocker:
Controlling Meshes via Curvature: Spin Transformations for Pose-Invariant Shape Processing. IPMI 2019: 221-234 - [c16]Benjamin Hou, Athanasios Vlontzos, Amir Alansary, Daniel Rueckert, Bernhard Kainz:
Flexible Conditional Image Generation of Missing Data with Learned Mental Maps. MLMIR@MICCAI 2019: 139-150 - [c15]Athanasios Vlontzos, Amir Alansary, Konstantinos Kamnitsas, Daniel Rueckert, Bernhard Kainz:
Multiple Landmark Detection Using Multi-agent Reinforcement Learning. MICCAI (4) 2019: 262-270 - [i12]Loïc Le Folgoc, Daniel Coelho de Castro, Jeremy Tan, Bishesh Khanal, Konstantinos Kamnitsas, Ian Walker, Amir Alansary, Ben Glocker:
Controlling Meshes via Curvature: Spin Transformations for Pose-Invariant Shape Processing. CoRR abs/1903.02429 (2019) - [i11]Athanasios Vlontzos, Amir Alansary, Konstantinos Kamnitsas, Daniel Rueckert, Bernhard Kainz:
Multiple Landmark Detection using Multi-Agent Reinforcement Learning. CoRR abs/1907.00318 (2019) - [i10]Benjamin Hou, Athanasios Vlontzos, Amir Alansary, Daniel Rueckert, Bernhard Kainz:
Flexible Conditional Image Generation of Missing Data with Learned Mental Maps. CoRR abs/1908.11312 (2019) - 2018
- [b1]Amir Alansary:
Reconstruction, localisation, and segmentation in medical images. Imperial College London, UK, 2018 - [j5]Benjamin Hou, Bishesh Khanal, Amir Alansary, Steven G. McDonagh, Alice Davidson, Mary A. Rutherford, Joseph V. Hajnal, Daniel Rueckert, Ben Glocker, Bernhard Kainz:
3-D Reconstruction in Canonical Co-Ordinate Space From Arbitrarily Oriented 2-D Images. IEEE Trans. Medical Imaging 37(8): 1737-1750 (2018) - [c14]Amir Alansary, Loïc Le Folgoc, Ghislain Vaillant, Ozan Oktay, Yuanwei Li, Wenjia Bai, Jonathan Passerat-Palmbach, Ricardo Guerrero, Konstantinos Kamnitsas, Benjamin Hou, Steven G. McDonagh, Ben Glocker, Bernhard Kainz, Daniel Rueckert:
Automatic View Planning with Multi-scale Deep Reinforcement Learning Agents. MICCAI (1) 2018: 277-285 - [c13]Yuanwei Li, Bishesh Khanal, Benjamin Hou, Amir Alansary, Juan J. Cerrolaza, Matthew Sinclair, Jacqueline Matthew, Chandni Gupta, Caroline L. Knight, Bernhard Kainz, Daniel Rueckert:
Standard Plane Detection in 3D Fetal Ultrasound Using an Iterative Transformation Network. MICCAI (1) 2018: 392-400 - [c12]Yuanwei Li, Amir Alansary, Juan J. Cerrolaza, Bishesh Khanal, Matthew Sinclair, Jacqueline Matthew, Chandni Gupta, Caroline L. Knight, Bernhard Kainz, Daniel Rueckert:
Fast Multiple Landmark Localisation Using a Patch-Based Iterative Network. MICCAI (1) 2018: 563-571 - [c11]Benjamin Hou, Nina Miolane, Bishesh Khanal, Matthew C. H. Lee, Amir Alansary, Steven G. McDonagh, Joseph V. Hajnal, Daniel Rueckert, Ben Glocker, Bernhard Kainz:
Computing CNN Loss and Gradients for Pose Estimation with Riemannian Geometry. MICCAI (1) 2018: 756-764 - [i9]Benjamin Hou, Nina Miolane, Bishesh Khanal, Matthew C. H. Lee, Amir Alansary, Steven G. McDonagh, Joseph V. Hajnal, Daniel Rueckert, Ben Glocker, Bernhard Kainz:
Computing CNN Loss and Gradients for Pose Estimation with Riemannian Geometry. CoRR abs/1805.01026 (2018) - [i8]Amir Alansary, Loïc Le Folgoc, Ghislain Vaillant, Ozan Oktay, Yuanwei Li, Wenjia Bai, Jonathan Passerat-Palmbach, Ricardo Guerrero, Konstantinos Kamnitsas, Benjamin Hou, Steven G. McDonagh, Ben Glocker, Bernhard Kainz, Daniel Rueckert:
Automatic View Planning with Multi-scale Deep Reinforcement Learning Agents. CoRR abs/1806.03228 (2018) - [i7]Yuanwei Li, Amir Alansary, Juan J. Cerrolaza, Bishesh Khanal, Matthew Sinclair, Jacqueline Matthew, Chandni Gupta, Caroline L. Knight, Bernhard Kainz, Daniel Rueckert:
Fast Multiple Landmark Localisation Using a Patch-based Iterative Network. CoRR abs/1806.06987 (2018) - [i6]Yuanwei Li, Bishesh Khanal, Benjamin Hou, Amir Alansary, Juan J. Cerrolaza, Matthew Sinclair, Jacqueline Matthew, Chandni Gupta, Caroline L. Knight, Bernhard Kainz, Daniel Rueckert:
Standard Plane Detection in 3D Fetal Ultrasound Using an Iterative Transformation Network. CoRR abs/1806.07486 (2018) - 2017
- [j4]Amir Alansary, Martin Rajchl, Steven G. McDonagh, Maria Murgasova, Mellisa Damodaram, David F. A. Lloyd, Alice Davidson, Mary A. Rutherford, Joseph V. Hajnal, Daniel Rueckert, Bernhard Kainz:
PVR: Patch-to-Volume Reconstruction for Large Area Motion Correction of Fetal MRI. IEEE Trans. Medical Imaging 36(10): 2031-2044 (2017) - [j3]Haichao Miao, Gabriel Mistelbauer, Alexey Karimov, Amir Alansary, Alice Davidson, David F. A. Lloyd, Mellisa Damodaram, Lisa Story, Jana Hutter, Joseph V. Hajnal, Mary A. Rutherford, Bernhard Preim, Bernhard Kainz, M. Eduard Gröller:
Placenta Maps: In Utero Placental Health Assessment of the Human Fetus. IEEE Trans. Vis. Comput. Graph. 23(6): 1612-1623 (2017) - [c10]Steven G. McDonagh, Benjamin Hou, Amir Alansary, Ozan Oktay, Konstantinos Kamnitsas, Mary A. Rutherford, Joseph V. Hajnal, Bernhard Kainz:
Context-Sensitive Super-Resolution for Fast Fetal Magnetic Resonance Imaging. CMMI/RAMBO/SWITCH@MICCAI 2017: 116-126 - [c9]Benjamin Hou, Amir Alansary, Steven G. McDonagh, Alice Davidson, Mary A. Rutherford, Joseph V. Hajnal, Daniel Rueckert, Ben Glocker, Bernhard Kainz:
Predicting Slice-to-Volume Transformation in Presence of Arbitrary Subject Motion. MICCAI (2) 2017: 296-304 - [i5]Benjamin Hou, Amir Alansary, Steven G. McDonagh, Daniel Rueckert, Ben Glocker, Bernhard Kainz:
Predicting Slice-to-Volume Transformation in Presence of Arbitrary Subject Motion. CoRR abs/1702.08891 (2017) - [i4]Steven G. McDonagh, Benjamin Hou, Konstantinos Kamnitsas, Ozan Oktay, Amir Alansary, Mary A. Rutherford, Joseph V. Hajnal, Bernhard Kainz:
Context-Sensitive Super-Resolution for Fast Fetal Magnetic Resonance Imaging. CoRR abs/1703.00035 (2017) - [i3]Benjamin Hou, Bishesh Khanal, Amir Alansary, Steven G. McDonagh, Alice Davidson, Mary A. Rutherford, Joseph V. Hajnal, Daniel Rueckert, Ben Glocker, Bernhard Kainz:
3D Reconstruction in Canonical Co-ordinate Space from Arbitrarily Oriented 2D Images. CoRR abs/1709.06341 (2017) - 2016
- [j2]Amir Alansary, Marwa Ismail, Ahmed Soliman, Fahmi Khalifa, Matthew Nitzken, Ahmed Elnakib, Mahmoud Mostapha, Austin Black, Katie Stinebruner, Manuel F. Casanova, Jacek M. Zurada, Ayman El-Baz:
Infant Brain Extraction in T1-Weighted MR Images Using BET and Refinement Using LCDG and MGRF Models. IEEE J. Biomed. Health Informatics 20(3): 925-935 (2016) - [c8]Amir Alansary, Konstantinos Kamnitsas, Alice Davidson, Rostislav Khlebnikov, Martin Rajchl, Christina Malamateniou, Mary A. Rutherford, Joseph V. Hajnal, Ben Glocker, Daniel Rueckert, Bernhard Kainz:
Fast Fully Automatic Segmentation of the Human Placenta from Motion Corrupted MRI. MICCAI (2) 2016: 589-597 - [c7]Bernhard Kainz, David F. A. Lloyd, Amir Alansary, Maria Kuklisova-Murgasova, Rostislav Khlebnikov, Daniel Rueckert, Mary A. Rutherford, Reza Razavi, Joseph V. Hajnal:
High-Performance Motion Correction of Fetal MRI. EuroRV³@EuroVis 2016: 5-7 - [i2]Martin Rajchl, Matthew C. H. Lee, Franklin Schrans, Alice Davidson, Jonathan Passerat-Palmbach, Giacomo Tarroni, Amir Alansary, Ozan Oktay, Bernhard Kainz, Daniel Rueckert:
Learning under Distributed Weak Supervision. CoRR abs/1606.01100 (2016) - [i1]Amir Alansary, Bernhard Kainz, Martin Rajchl, Maria Murgasova, Mellisa Damodaram, David F. A. Lloyd, Alice Davidson, Steven G. McDonagh, Mary A. Rutherford, Joseph V. Hajnal, Daniel Rueckert:
PVR: Patch-to-Volume Reconstruction for Large Area Motion Correction of Fetal MRI. CoRR abs/1611.07289 (2016) - 2015
- [j1]Adriënne M. Mendrik, Koen L. Vincken, Hugo J. Kuijf, Marcel Breeuwer, Willem H. Bouvy, Jeroen de Bresser, Amir Alansary, Marleen de Bruijne, Aaron Carass, Ayman El-Baz, Amod Jog, Ranveer Katyal, Ali R. Khan, Fedde van der Lijn, Qaiser Mahmood, Ryan Mukherjee, Annegreet van Opbroek, Sahil Paneri, Sérgio Pereira, Mikael Persson, Martin Rajchl, Duygu Sarikaya, Örjan Smedby, Carlos A. Silva, Henri A. Vrooman, Saurabh Vyas, Chunliang Wang, Liang Zhao, Geert Jan Biessels, Max A. Viergever:
MRBrainS Challenge: Online Evaluation Framework for Brain Image Segmentation in 3T MRI Scans. Comput. Intell. Neurosci. 2015: 813696:1-813696:16 (2015) - [c6]Amir Alansary, Matthew C. H. Lee, Kevin Keraudren, Bernhard Kainz, Christina Malamateniou, Mary A. Rutherford, Joseph V. Hajnal, Ben Glocker, Daniel Rueckert:
Automatic Brain Localization in Fetal MRI Using Superpixel Graphs. MLMMI@ICML 2015: 13-22 - [c5]Bernhard Kainz, Amir Alansary, Christina Malamateniou, Kevin Keraudren, Mary A. Rutherford, Joseph V. Hajnal, Daniel Rueckert:
Flexible Reconstruction and Correction of Unpredictable Motion from Stacks of 2D Images. MICCAI (2) 2015: 555-562 - 2014
- [c4]Mahmoud Mostapha, Ahmed Soliman, Fahmi Khalifa, Ahmed Elnakib, Amir Alansary, Matthew Nitzken, Manuel F. Casanova, Ayman El-Baz:
A statistical framework for the classification of infant DT images. ICIP 2014: 2222-2226 - [c3]Amir Alansary, Ahmed Soliman, Matthew Nitzken, Fahmi Khalifa, Ahmed Elnakib, Mahmoud Mostapha, Manuel F. Casanova, Ayman El-Baz:
An integrated geometrical and stochastic approach for accurate infant brain extraction. ICIP 2014: 3542-3546 - [c2]Mahmoud Mostapha, Amir Alansary, Ahmed Soliman, Fahmi Khalifa, Matthew Nitzken, Rasha Khodeir, Manuel F. Casanova, Ayman El-Baz:
Atlas-based approach for the segmentation of infant DTI MR brain images. ISBI 2014: 1255-1258 - 2013
- [c1]Ahmed Soliman, Fahmi Khalifa, Amir Alansary, Georgy L. Gimel'farb, Ayman El-Baz:
Segmentation of lung region based on using parallel implementation of joint MGRF: Validation on 3D realistic lung phantoms. ISBI 2013: 864-867
Coauthor Index
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