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Jason A. Vander Heiden
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2020 – today
- 2021
- [j6]Jieming Chen, Shravan Madireddi
, Deepti Nagarkar, Maciej Migdal
, Jason A. Vander Heiden
, Diana Chang, Kiran Mukhyala, Suresh Selvaraj, Edward E. Kadel, Matthew J. Brauer, Sanjeev Mariathasan, Julie Hunkapiller, Suchit Jhunjhunwala, Matthew L. Albert, Christian Hammer
:
In silico tools for accurate HLA and KIR inference from clinical sequencing data empower immunogenetics on individual-patient and population scales. Briefings Bioinform. 22(3) (2021) - 2020
- [j5]Scott Christley, Ademar Aguiar
, George Blanck, Felix Breden, Syed Ahmad Chan Bukhari, Christian E. Busse
, Jerome Jaglale, Srilakshmy L. Harikrishnan, Uri Laserson, Bjoern Peters, Artur Rocha
, Chaim A. Schramm, Sarah Taylor, Jason A. Vander Heiden, Bojan Zimonja, Corey T. Watson, Brian Corrie, Lindsay G. Cowell:
The ADC API: A Web API for the Programmatic Query of the AIRR Data Commons. Frontiers Big Data 3: 22 (2020)
2010 – 2019
- 2017
- [j4]Christopher R. Bolen
, Florian Rubelt
, Jason A. Vander Heiden, Mark M. Davis
:
The Repertoire Dissimilarity Index as a method to compare lymphocyte receptor repertoires. BMC Bioinform. 18(1): 155:1-155:8 (2017) - 2016
- [j3]Inimary T. Toby, Mikhail K. Levin, Edward Salinas, Scott Christley, Sanchita Bhattacharya, Felix Breden, Adam Buntzman
, Brian Corrie, John M. Fonner, Namita T. Gupta
, Uri Hershberg
, Nishanth Marthandan, Aaron M. Rosenfeld
, William Rounds, Florian Rubelt
, Walter Scarborough, Jamie K. Scott, Mohamed Uduman, Jason A. Vander Heiden, Richard H. Scheuermann, Nancy Monson, Steven H. Kleinstein, Lindsay G. Cowell:
VDJML: a file format with tools for capturing the results of inferring immune receptor rearrangements. BMC Bioinform. 17(S-13): 333 (2016) - [c1]Trevor Cohen, Dominic Widdows, Jason A. Vander Heiden, Namita T. Gupta, Steven H. Kleinstein:
Graded Vector Representations of Immunoglobulins Produced in Response to West Nile Virus. QI 2016: 135-148 - 2015
- [j2]Namita T. Gupta
, Jason A. Vander Heiden, Mohamed Uduman, Daniel Gadala-Maria, Gur Yaari
, Steven H. Kleinstein:
Change-O: a toolkit for analyzing large-scale B cell immunoglobulin repertoire sequencing data. Bioinform. 31(20): 3356-3358 (2015) - 2014
- [j1]Jason A. Vander Heiden, Gur Yaari
, Mohamed Uduman, Joel N. H. Stern
, Kevin C. O'Connor, David A. Hafler, Francois Vigneault
, Steven H. Kleinstein:
pRESTO: a toolkit for processing high-throughput sequencing raw reads of lymphocyte receptor repertoires. Bioinform. 30(13): 1930-1932 (2014)
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