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Nevan J. Krogan
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2010 – 2019
- 2016
- [j10]K. Aurelia Ball
, Jeffrey R. Johnson, Mary K. Lewinski, John Guatelli, Erik Verschueren, Nevan J. Krogan, Matthew P. Jacobson
:
Non-degradative Ubiquitination of Protein Kinases. PLoS Comput. Biol. 12(6) (2016) - 2015
- [j9]Jeffrey R. Johnson, Silvia D. Santos, Tasha Johnson, Ursula Pieper, Marta Strumillo
, Omar Wagih
, Andrej Sali, Nevan J. Krogan, Pedro Beltrão
:
Prediction of Functionally Important Phospho-Regulatory Events in Xenopus laevis Oocytes. PLoS Comput. Biol. 11(8) (2015) - 2012
- [j8]Stefanie Jäger
, Peter Cimermancic, Natali Gulbahce, Jeffrey R. Johnson, Kathryn E. McGovern
, Starlynn C. Clarke, Michael Shales, Gaelle Mercenne, Lars Pache, Kathy Li, Hilda Hernandez, Gwendolyn M. Jang, Shoshannah L. Roth, Eyal Akiva, John Marlett, Melanie Stephens, Iván D'Orso, Jason Fernandes
, Marie E. Fahey, Cathal Mahon, Anthony J. O'Donoghue, Aleksandar Todorovic, John H. Morris
, David A. Maltby, Tom Alber, Gerard Cagney
, Frederic D. Bushman
, John A. Young, Sumit K. Chanda, Wesley I. Sundquist, Tanja Kortemme
, Ryan D. Hernandez, Charles S. Craik, Alma Burlingame, Andrej Sali, Alan D. Frankel, Nevan J. Krogan:
Global landscape of HIV-human protein complexes. Nat. 481(7381): 365-370 (2012) - 2011
- [j7]Marie E. Fahey, Melanie J. Bennett, Cathal Mahon, Stefanie Jäger
, Lars Pache, Dhiraj Kumar, Alex Shapiro, Kanury Rao, Sumit K. Chanda, Charles S. Craik, Alan D. Frankel, Nevan J. Krogan:
GPS-Prot: a web-based visualization platform for integrating host-pathogen interaction data. BMC Bioinform. 12: 298 (2011) - [j6]Colm J. Ryan
, Derek Greene
, Aude Guénolé, Haico van Attikum
, Nevan J. Krogan, Pádraig Cunningham
, Gerard Cagney
:
Improved functional overview of protein complexes using inferred epistatic relationships. BMC Syst. Biol. 5: 80 (2011) - [j5]Fergal P. Casey, Nevan J. Krogan, Denis C. Shields, Gerard Cagney
:
Distinct configurations of protein complexes and biochemical pathways revealed by epistatic interaction network motifs. BMC Syst. Biol. 5: 133 (2011)
2000 – 2009
- 2008
- [j4]Derek Greene
, Gerard Cagney
, Nevan J. Krogan, Padraig Cunningham
:
Ensemble non-negative matrix factorization methods for clustering protein-protein interactions. Bioinform. 24(15): 1722-1728 (2008) - [j3]Fergal P. Casey, Gerard Cagney
, Nevan J. Krogan, Denis C. Shields:
Optimal stepwise experimental design for pairwise functional interaction studies. Bioinform. 24(23): 2733-2739 (2008) - [j2]Sourav Bandyopadhyay, Ryan M. Kelley, Nevan J. Krogan, Trey Ideker
:
Functional Maps of Protein Complexes from Quantitative Genetic Interaction Data. PLoS Comput. Biol. 4(4) (2008) - 2006
- [j1]Sylvain Pitre, Frank K. H. A. Dehne, Albert Chan, James Cheetham, Alex Duong, Andrew Emili, Marinella Gebbia, Jack Greenblatt, Matthew Jessulat, Nevan J. Krogan, Xuemei Luo, Ashkan Golshani:
PIPE: a protein-protein interaction prediction engine based on the re-occurring short polypeptide sequences between known interacting protein pairs. BMC Bioinform. 7: 365 (2006)
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