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John M. Cunningham

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affiliation: University of Chicago, Department of Pediatrics, IL, USA

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2010 – 2019

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2018
[j4]
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  - journals/bioinformatics/WangCY18
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Zhezhen Wang, John M. Cunningham, Xinan Holly Yang:
CisPi: a transcriptomic score for disclosing cis-acting disease-associated lincRNAs. Bioinform. 34(17): i664-i670 (2018)
2017
[j3]
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Xinan Holly Yang, Fangming Tang, Jisu Shin, John M. Cunningham:
Incorporating genomic, transcriptomic and clinical data: a prognostic and stem cell-like MYC and PRC imbalance in high-risk neuroblastoma. BMC Syst. Biol. 11(S-5): 92:1-92:17 (2017)
2015
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Bin Wang, John M. Cunningham, Xinan Holly Yang:
Seq2pathway: an R/Bioconductor package for pathway analysis of next-generation sequencing data. Bioinform. 31(18): 3043-3045 (2015)
[j1]
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  - journals/bmcbi/YangLWZDOJCCC15
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Xinan Yang, Meiyi Li, Bin Wang, Wanqi Zhu, Aurelie Desgardin, Kenan Onel, Jill de Jong, Jianjun Chen, Luonan Chen, John M. Cunningham:
Systematic computation with functional gene-sets among leukemic and hematopoietic stem cells reveals a favorable prognostic signature for acute myeloid leukemia. BMC Bioinform. 16: 97:1-97:21 (2015)

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