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2020 – today
- 2024
[j11]Jian-Ming Zhang
, Yufan He, Wentao Chen, Li-Dan Kuang, Bin Zheng:
CorrFormer: Context-aware tracking with cross-correlation and transformer. Comput. Electr. Eng. 114: 109075 (2024)- [j10]Jianming Zhang, Wentao Chen, Yufan He, Li-Dan Kuang, Arun Kumar Sangaiah:
SiamS3C: spatial-channel cross-correlation for visual tracking with centerness-guided regression. Multim. Syst. 30(5): 251 (2024) - [c27]Mohammad Zalbagi Darestani, Vishwesh Nath, Wenqi Li, Yufan He, Holger R. Roth, Ziyue Xu, Daguang Xu, Reinhard Heckel, Can Zhao:
IR-FRestormer: Iterative Refinement with Fourier-Based Restormer for Accelerated MRI Reconstruction. WACV 2024: 7640-7649 - [i22]Yufan He, Pengfei Guo, Yucheng Tang, Andriy Myronenko, Vishwesh Nath, Ziyue Xu, Dong Yang, Can Zhao, Benjamin Simon, Mason Belue, Stephanie A. Harmon, Baris Turkbey, Daguang Xu, Wenqi Li:
VISTA3D: Versatile Imaging SegmenTation and Annotation model for 3D Computed Tomography. CoRR abs/2406.05285 (2024) - [i21]Yucheng Tang, Yufan He, Vishwesh Nath, Pengfei Guo, Ruining Deng, Tianyuan Yao, Quan Liu, Can Cui, Mengmeng Yin, Ziyue Xu, Holger Roth, Daguang Xu, Haichun Yang, Yuankai Huo:
HoloHisto: End-to-end Gigapixel WSI Segmentation with 4K Resolution Sequential Tokenization. CoRR abs/2407.03307 (2024) - [i20]Yufan He, Pengfei Guo, Yucheng Tang, Andriy Myronenko, Vishwesh Nath, Ziyue Xu, Dong Yang, Can Zhao, Daguang Xu, Wenqi Li:
A Short Review and Evaluation of SAM2's Performance in 3D CT Image Segmentation. CoRR abs/2408.11210 (2024) - 2023
- [c26]Andriy Myronenko, Dong Yang, Yufan He, Daguang Xu:
Automated 3D Segmentation of Kidneys and Tumors in MICCAI KiTS 2023 Challenge. KiTS@MICCAI 2023: 1-7 - [c25]Andriy Myronenko, Dong Yang, Yufan He, Daguang Xu:
Aorta Segmentation from 3D CT in MICCAI SEG.A. 2023 Challenge. SEG.A@MICCAI 2023: 13-18 - [c24]Yufan He, Vishwesh Nath, Dong Yang, Yucheng Tang, Andriy Myronenko, Daguang Xu:
SwinUNETR-V2: Stronger Swin Transformers with Stagewise Convolutions for 3D Medical Image Segmentation. MICCAI (4) 2023: 416-426 - [c23]Dong Yang, Ziyue Xu, Yufan He, Vishwesh Nath, Wenqi Li, Andriy Myronenko, Ali Hatamizadeh, Can Zhao, Holger R. Roth, Daguang Xu:
DAST: Differentiable Architecture Search with Transformer for 3D Medical Image Segmentation. MICCAI (3) 2023: 747-756 - [c22]Junyu Chen, Yihao Liu, Yufan He, Yong Du:
Deformable Cross-Attention Transformer for Medical Image Registration. MLMI@MICCAI (1) 2023: 115-125 - [i19]Junyu Chen, Yihao Liu, Yufan He, Yong Du:
Spatially-varying Regularization with Conditional Transformer for Unsupervised Image Registration. CoRR abs/2303.06168 (2023) - [i18]Junyu Chen, Yihao Liu, Yufan He, Yong Du:
Deformable Cross-Attention Transformer for Medical Image Registration. CoRR abs/2303.06179 (2023) - [i17]Jeya Maria Jose Valanarasu, Yucheng Tang, Dong Yang, Ziyue Xu, Can Zhao, Wenqi Li, Vishal M. Patel, Bennett A. Landman, Daguang Xu, Yufan He, Vishwesh Nath:
Disruptive Autoencoders: Leveraging Low-level features for 3D Medical Image Pre-training. CoRR abs/2307.16896 (2023) - [i16]Andriy Myronenko, Dong Yang, Yufan He, Daguang Xu:
Automated 3D Segmentation of Kidneys and Tumors in MICCAI KiTS 2023 Challenge. CoRR abs/2310.04110 (2023) - [i15]Andriy Myronenko, Dong Yang, Yufan He, Daguang Xu:
Aorta Segmentation from 3D CT in MICCAI SEG.A. 2023 Challenge. CoRR abs/2310.04114 (2023) - 2022
- [j9]Junyu Chen, Eric C. Frey, Yufan He, William Paul Segars, Ye Li, Yong Du:
TransMorph: Transformer for unsupervised medical image registration. Medical Image Anal. 82: 102615 (2022) - [j8]Yihao Liu, Aaron Carass, Lianrui Zuo, Yufan He, Shuo Han, Lorenzo Gregori, Sean Murray, Rohit Mishra, Jianqin Lei, Peter A. Calabresi, Shiv Saidha, Jerry L. Prince:
Disentangled Representation Learning for OCTA Vessel Segmentation With Limited Training Data. IEEE Trans. Medical Imaging 41(12): 3686-3698 (2022) - [c21]Cheng Peng, Andriy Myronenko, Ali Hatamizadeh, Vishwesh Nath, Md Mahfuzur Rahman Siddiquee, Yufan He, Daguang Xu, Rama Chellappa, Dong Yang:
HyperSegNAS: Bridging One-Shot Neural Architecture Search with 3D Medical Image Segmentation using HyperNet. CVPR 2022: 20709-20719 - [c20]Andriy Myronenko, Md Mahfuzur Rahman Siddiquee, Dong Yang, Yufan He, Daguang Xu:
Automated Head and Neck Tumor Segmentation from 3D PET/CT HECKTOR 2022 Challenge Report. HECKTOR@MICCAI 2022: 31-37 - [c19]Md Mahfuzur Rahman Siddiquee, Dong Yang, Yufan He, Daguang Xu, Andriy Myronenko:
Automated 3D Segmentation of Renal Structures for Renal Cancer Treatment. CuRIOUS/KiPA/MELA@MICCAI 2022: 36-42 - [c18]Yufan He, Dong Yang, Andriy Myronenko, Daguang Xu:
Efficient Population Based Hyperparameter Scheduling for Medical Image Segmentation. MICCAI (5) 2022: 560-569 - [i14]Md Mahfuzur Rahman Siddiquee, Dong Yang, Yufan He, Daguang Xu, Andriy Myronenko:
Automated ischemic stroke lesion segmentation from 3D MRI. CoRR abs/2209.09546 (2022) - [i13]Md Mahfuzur Rahman Siddiquee, Dong Yang, Yufan He, Daguang Xu, Andriy Myronenko:
Automated segmentation of intracranial hemorrhages from 3D CT. CoRR abs/2209.10648 (2022) - [i12]Andriy Myronenko, Md Mahfuzur Rahman Siddiquee, Dong Yang, Yufan He, Daguang Xu:
Automated head and neck tumor segmentation from 3D PET/CT. CoRR abs/2209.10809 (2022) - [i11]M. Jorge Cardoso, Wenqi Li, Richard Brown, Nic Ma, Eric Kerfoot, Yiheng Wang, Benjamin Murray, Andriy Myronenko, Can Zhao, Dong Yang, Vishwesh Nath, Yufan He, Ziyue Xu, Ali Hatamizadeh, Wentao Zhu, Yun Liu, Mingxin Zheng, Yucheng Tang, Isaac Yang, Michael Zephyr, Behrooz Hashemian, Sachidanand Alle, Mohammad Zalbagi Darestani, Charlie Budd, Marc Modat, Tom Vercauteren, Guotai Wang, Yiwen Li, Yipeng Hu, Yunguan Fu, Benjamin Gorman, Hans J. Johnson, Brad W. Genereaux, Barbaros S. Erdal, Vikash Gupta, Andres Diaz-Pinto, Andre Dourson, Lena Maier-Hein, Paul F. Jaeger, Michael Baumgartner, Jayashree Kalpathy-Cramer, Mona Flores, Justin S. Kirby, Lee A. D. Cooper, Holger R. Roth, Daguang Xu, David Bericat, Ralf Floca, S. Kevin Zhou, Haris Shuaib, Keyvan Farahani, Klaus H. Maier-Hein, Stephen R. Aylward, Prerna Dogra, Sébastien Ourselin, Andrew Feng:
MONAI: An open-source framework for deep learning in healthcare. CoRR abs/2211.02701 (2022) - 2021
- [j7]Yufan He, Aaron Carass, Yihao Liu, Bruno M. Jedynak, Sharon D. Solomon, Shiv Saidha, Peter A. Calabresi, Jerry L. Prince:
Structured layer surface segmentation for retina OCT using fully convolutional regression networks. Medical Image Anal. 68: 101856 (2021) - [j6]Yufan He, Aaron Carass, Lianrui Zuo, Blake E. Dewey, Jerry L. Prince:
Autoencoder based self-supervised test-time adaptation for medical image analysis. Medical Image Anal. 72: 102136 (2021) - [j5]Lianrui Zuo, Blake E. Dewey, Yihao Liu, Yufan He, Scott D. Newsome, Ellen M. Mowry, Susan M. Resnick, Jerry L. Prince, Aaron Carass:
Unsupervised MR harmonization by learning disentangled representations using information bottleneck theory. NeuroImage 243: 118569 (2021) - [c17]Yufan He, Dong Yang, Holger Roth, Can Zhao, Daguang Xu:
DiNTS: Differentiable Neural Network Topology Search for 3D Medical Image Segmentation. CVPR 2021: 5841-5850 - [c16]Lianrui Zuo, Blake E. Dewey, Aaron Carass, Yihao Liu, Yufan He, Peter A. Calabresi, Jerry L. Prince:
Information-Based Disentangled Representation Learning for Unsupervised MR Harmonization. IPMI 2021: 346-359 - [i10]Lianrui Zuo, Blake E. Dewey, Aaron Carass, Yihao Liu, Yufan He, Peter A. Calabresi, Jerry L. Prince:
Information-based Disentangled Representation Learning for Unsupervised MR Harmonization. CoRR abs/2103.13283 (2021) - [i9]Yufan He, Dong Yang, Holger Roth, Can Zhao, Daguang Xu:
DiNTS: Differentiable Neural Network Topology Search for 3D Medical Image Segmentation. CoRR abs/2103.15954 (2021) - [i8]Junyu Chen, Yufan He, Eric C. Frey, Ye Li, Yong Du:
ViT-V-Net: Vision Transformer for Unsupervised Volumetric Medical Image Registration. CoRR abs/2104.06468 (2021) - [i7]Junyu Chen, Yong Du, Yufan He, William Paul Segars, Ye Li, Eric C. Frey:
TransMorph: Transformer for unsupervised medical image registration. CoRR abs/2111.10480 (2021) - [i6]Cheng Peng, Andriy Myronenko, Ali Hatamizadeh, Vishwesh Nath, Md Mahfuzur Rahman Siddiquee, Yufan He, Daguang Xu, Rama Chellappa, Dong Yang:
HyperSegNAS: Bridging One-Shot Neural Architecture Search with 3D Medical Image Segmentation using HyperNet. CoRR abs/2112.10652 (2021) - 2020
- [j4]Shuo Han, Aaron Carass, Yufan He, Jerry L. Prince:
Automatic cerebellum anatomical parcellation using U-Net with locally constrained optimization. NeuroImage 218: 116819 (2020) - [c15]Jacob C. Reinhold, Yufan He, Shizhong Han, Yunqiang Chen, Dashan Gao, Junghoon Lee, Jerry L. Prince, Aaron Carass:
Validating Uncertainty in Medical Image Translation. ISBI 2020: 95-98 - [c14]Lianrui Zuo, Blake E. Dewey, Aaron Carass, Yufan He, Muhan Shao, Jacob C. Reinhold, Jerry L. Prince:
Synthesizing Realistic Brain MR Images with Noise Control. SASHIMI@MICCAI 2020: 21-31 - [c13]Yufan He, Aaron Carass, Lianrui Zuo, Blake E. Dewey, Jerry L. Prince:
Self Domain Adapted Network. MICCAI (1) 2020: 437-446 - [c12]Blake E. Dewey, Lianrui Zuo, Aaron Carass, Yufan He, Yihao Liu, Ellen M. Mowry, Scott D. Newsome, Jiwon Oh, Peter A. Calabresi, Jerry L. Prince:
A Disentangled Latent Space for Cross-Site MRI Harmonization. MICCAI (7) 2020: 720-729 - [c11]Yihao Liu, Lianrui Zuo, Aaron Carass, Yufan He, Angeliki Filippatou, Sharon D. Solomon, Shiv Saidha, Peter A. Calabresi, Jerry L. Prince:
Variational intensity cross channel encoder for unsupervised vessel segmentation on OCT angiography. Medical Imaging: Image Processing 2020: 113130Y - [c10]Jacob C. Reinhold, Yufan He, Shizhong Han, Yunqiang Chen, Dashan Gao, Junghoon Lee, Jerry L. Prince, Aaron Carass:
Finding novelty with uncertainty. Medical Imaging: Image Processing 2020: 113130H - [c9]Yufan He, Aaron Carass, Yihao Liu, Angeliki Filippatou, Bruno M. Jedynak, Sharon D. Solomon, Shiv Saidha, Peter A. Calabresi, Jerry L. Prince:
Segmenting retinal OCT images with inter-B-scan and longitudinal information. Medical Imaging: Image Processing 2020: 113133C - [c8]Yufan He, Aaron Carass, Yihao Liu, Shiv Saidha, Peter A. Calabresi, Jerry L. Prince:
Adversarial domain adaptation for multi-device retinal OCT segmentation. Medical Imaging: Image Processing 2020: 1131309 - [i5]Jacob C. Reinhold, Yufan He, Shizhong Han, Yunqiang Chen, Dashan Gao, Junghoon Lee, Jerry L. Prince, Aaron Carass:
Finding novelty with uncertainty. CoRR abs/2002.04626 (2020) - [i4]Jacob C. Reinhold, Yufan He, Shizhong Han, Yunqiang Chen, Dashan Gao, Junghoon Lee, Jerry L. Prince, Aaron Carass:
Validating uncertainty in medical image translation. CoRR abs/2002.04639 (2020) - [i3]Yufan He, Aaron Carass, Lianrui Zuo, Blake E. Dewey, Jerry L. Prince:
Self domain adapted network. CoRR abs/2007.03162 (2020)
2010 – 2019
- 2019
- [c7]Yihao Liu, Aaron Carass, Angeliki Filippatou, Yufan He, Sharon D. Solomon, Shiv Saidha, Peter A. Calabresi, Jerry L. Prince:
Projection Artifact Suppression For Inner Retina In Oct Angiography. ISBI 2019: 592-596 - [c6]Yufan He, Aaron Carass, Yihao Liu, Bruno M. Jedynak, Sharon D. Solomon, Shiv Saidha, Peter A. Calabresi, Jerry L. Prince:
Fully Convolutional Boundary Regression for Retina OCT Segmentation. MICCAI (1) 2019: 120-128 - [c5]Shuo Han, Yufan He, Aaron Carass, Sarah H. Ying, Jerry L. Prince:
Cerebellum parcellation with convolutional neural networks. Medical Imaging: Image Processing 2019: 109490K - 2018
- [j3]Jianfeng Xu, Yufan He, Lan Liu:
三支决策代价目标函数的关系及推理研究 (Relationship and Reasoning Study for Three-way Decision Cost Objective Functions). 计算机科学 45(6): 176-182 (2018) - [c4]Sureerat Reaungamornrat, Aaron Carass, Yufan He, Shiv Saidha, Peter A. Calabresi, Jerry L. Prince:
Inter-scanner variation independent descriptors for constrained diffeomorphic demons registration of retina OCT. Medical Imaging: Image Processing 2018: 105741B - [i2]Yufan He, Aaron Carass, Bruno M. Jedynak, Sharon D. Solomon, Shiv Saidha, Peter A. Calabresi, Jerry L. Prince:
Topology guaranteed segmentation of the human retina from OCT using convolutional neural networks. CoRR abs/1803.05120 (2018) - 2017
- [j2]Jianfeng Xu, Yufan He, Yuanjian Zhang, Tao Tang:
基于弯曲距离三支决策的时序相似性算法 (Similarity Algorithm Based on Three Way Decision of Time Warping Distance). 计算机科学 44(9): 40-44 (2017) - [j1]Lei Li, Huiwen Jia, Xuehua Ban, Yufan He:
基于混淆的广播多重签名方案 (Obfuscation-based Broadcasting Multi-signature Scheme). 计算机科学 44(Z11): 329-333 (2017) - [c3]Yufan He, Aaron Carass, Yeyi Yun, Can Zhao, Bruno M. Jedynak, Sharon D. Solomon, Shiv Saidha, Peter A. Calabresi, Jerry L. Prince:
Towards Topological Correct Segmentation of Macular OCT from Cascaded FCNs. FIFI/OMIA@MICCAI 2017: 202-209 - [c2]Can Zhao, Aaron Carass, Junghoon Lee, Yufan He, Jerry L. Prince:
Whole Brain Segmentation and Labeling from CT Using Synthetic MR Images. MLMI@MICCAI 2017: 291-298 - 2016
- [c1]Yufan He, Yankui Sun, Min Chen, Yuanjie Zheng, Hui Liu, Cecilia Leon, William Beltran, James C. Gee:
Automatic segmentation of canine retinal OCT using adaptive gradient enhancement and region growing. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging 2016: 97881Q - 2015
- [i1]Yankui Sun, Tian Zhang, Yue Zhao, Yufan He:
3D Automatic Segmentation Method for Retinal Optical Coherence Tomography Volume Data Using Boundary Surface Enhancement. CoRR abs/1508.00966 (2015)
Coauthor Index
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