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ORCIDZhaleh Safikhani
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2020 – today
- 2022
[j7]Petr Smirnov, Ian Smith
, Zhaleh Safikhani, Wail Ba-alawi, Farnoosh Khodakarami, Eva Lin, Yihong Yu, Scott Martin, Janosch Ortmann, Tero Aittokallio, Marc Hafner, Benjamin Haibe-Kains:
Evaluation of statistical approaches for association testing in noisy drug screening data. BMC Bioinform. 23(1): 188 (2022)- 2020
- [j6]Andrew E. Brereton, Stephen MacKinnon, Zhaleh Safikhani, Shawn Reeves, Sana Alwash, Vijay Shahani, Andreas Windemuth:
Predicting drug properties with parameter-free machine learning: pareto-optimal embedded modeling (POEM). Mach. Learn. Sci. Technol. 1(2): 25008 (2020) - [c1]Seyed Ali Madani Tonekaboni, Andrew E. Brereton, Zhaleh Safikhani, Andreas Windemuth, Benjamin Haibe-Kains, Stephen MacKinnon:
Learning across label confidence distributions using Filtered Transfer Learning. ICMLA 2020: 1117-1123 - [i2]Andrew E. Brereton, Stephen MacKinnon, Zhaleh Safikhani, Shawn Reeves, Sana Alwash, Vijay Shahani, Andreas Windemuth:
Predicting drug properties with parameter-free machine learning: Pareto-Optimal Embedded Modeling (POEM). CoRR abs/2002.04555 (2020) - [i1]Seyed Ali Madani Tonekaboni, Andrew E. Brereton, Zhaleh Safikhani, Andreas Windemuth, Benjamin Haibe-Kains, Stephen MacKinnon:
Learning across label confidence distributions using Filtered Transfer Learning. CoRR abs/2006.02528 (2020)
2010 – 2019
- 2018
- [j5]Fupan Yao, Seyed Ali Madani Tonekaboni, Zhaleh Safikhani, Petr Smirnov, Nehme El-Hachem, Mark Freeman, Venkata Satya Kumar Manem, Benjamin Haibe-Kains:
Tissue specificity of in vitro drug sensitivity. J. Am. Medical Informatics Assoc. 25(2): 158-166 (2018) - [j4]Petr Smirnov, Victor Kofia, Alexander Maru, Mark Freeman, Chantal Ho, Nehme El-Hachem, George-Alexandru Adam, Wail Ba-alawi, Zhaleh Safikhani, Benjamin Haibe-Kains:
PharmacoDB: an integrative database for mining in vitro anticancer drug screening studies. Nucleic Acids Res. 46(Database-Issue): D994-D1002 (2018) - 2016
- [j3]Lavanya Kannan, Marcel Ramos, Angela Re, Nehme Hachem, Zhaleh Safikhani, Deena M. A. Gendoo, Sean Davis, David Gomez-Cabrero, Robert Castelo, Kasper D. Hansen, Vincent J. Carey, Martin Morgan, Aedín C. Culhane, Benjamin Haibe-Kains, Levi Waldron:
Public data and open source tools for multi-assay genomic investigation of disease. Briefings Bioinform. 17(4): 603-615 (2016) - [j2]Petr Smirnov, Zhaleh Safikhani, Nehme Hachem, Dong Wang, Adrian She, Catharina Olsen, Mark Freeman, Heather Marie Selby, Deena M. A. Gendoo, Patrick Grossmann, Andrew H. Beck, Hugo J. W. L. Aerts, Mathieu Lupien, Anna Goldenberg, Benjamin Haibe-Kains:
PharmacoGx: an R package for analysis of large pharmacogenomic datasets. Bioinform. 32(8): 1244-1246 (2016) - [j1]Zhaleh Safikhani, Nehme Hachem, Petr Smirnov, Mark Freeman, Anna Goldenberg, Nicolai J. Birkbak, Andrew H. Beck, Hugo J. W. L. Aerts, John Quackenbush, Benjamin Haibe-Kains:
Safikhani et al. reply. Nat. 540(7631): E2-E4 (2016)
Coauthor Index
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