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Jianlin Shi
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2020 – today
- 2023
- [j6]Vipina Kuttichi Keloth, Juan M. Banda, Michael J. Gurley, Paul M. Heider, Georgina Kennedy, Hongfang Liu, Feifan Liu, Timothy A. Miller, Karthik Natarajan, Olga V. Patterson, Yifan Peng, Kalpana Raja, Ruth M. Reeves, Masoud Rouhizadeh, Jianlin Shi, Xiaoyan Wang, Yanshan Wang, Wei-Qi Wei, Andrew E. Williams, Rui Zhang, Rimma Belenkaya, Christian G. Reich, Clair Blacketer, Patrick B. Ryan, George Hripcsak, Noémie Elhadad, Hua Xu:
Representing and utilizing clinical textual data for real world studies: An OHDSI approach. J. Biomed. Informatics 142: 104343 (2023) - [j5]Qiwei Gan, Mengke Hu, Kelly S. Peterson, Hannah Eyre, Patrick R. Alba, Annie E. Bowles, Johnathan C. Stanley, Scott L. DuVall, Jianlin Shi:
A deep learning approach for medication disposition and corresponding attributes extraction. J. Biomed. Informatics 143: 104391 (2023) - 2022
- [j4]Richard L. Bradshaw, Kensaku Kawamoto, Kimberly A. Kaphingst, Wendy Kohlmann, Rachel Hess, Michael C. Flynn, Claude J. Nanjo, Phillip B. Warner, Jianlin Shi, Keaton L. Morgan, Kadyn Kimball, Pallavi Ranade-Kharkar, Ophira Ginsburg, Melody Goodman, Rachelle Chambers, Devin M. Mann, Scott P. Narus, Javier Gonzalez, Shane Loomis, Priscilla Chan, Rachel Monahan, Emerson P. Borsato, David E. Shields, Douglas K. Martin, Cecilia M. Kessler, Guilherme Del Fiol:
GARDE: a standards-based clinical decision support platform for identifying population health management cohorts. J. Am. Medical Informatics Assoc. 29(5): 928-936 (2022) - 2021
- [c11]Hannah Eyre, Alec B. Chapman, Kelly S. Peterson, Jianlin Shi, Patrick R. Alba, Makoto M. Jones, Tamara L. Box, Scott L. DuVall, Olga V. Patterson:
Launching into clinical space with medspaCy: a new clinical text processing toolkit in Python. AMIA 2021 - [i3]Hannah Eyre, Alec B. Chapman, Kelly S. Peterson, Jianlin Shi, Patrick R. Alba, Makoto M. Jones, Tamara L. Box, Scott L. DuVall, Olga V. Patterson:
Launching into clinical space with medspaCy: a new clinical text processing toolkit in Python. CoRR abs/2106.07799 (2021) - 2020
- [c10]Hannah Eyre, Olga V. Patterson, Jianlin Shi, Kelly S. Peterson, Alec B. Chapman, Patrick R. Alba, Scott L. DuVall:
Removing barriers to clinical text processing with MedSpaCy. AMIA 2020
2010 – 2019
- 2019
- [j3]Jiantao Bian, Samir E. AbdelRahman, Jianlin Shi, Guilherme Del Fiol:
Automatic identification of recent high impact clinical articles in PubMed to support clinical decision making using time-agnostic features. J. Biomed. Informatics 89: 1-10 (2019) - [c9]Brian T. Bucher, Jianlin Shi, Robert J. Pettit, Jeffrey P. Ferraro, Wendy W. Chapman, Adi V. Gundlapalli:
Determination of Marital Status of Patients from Structured and Unstructured Electronic Healthcare Data. AMIA 2019 - [c8]Jianlin Shi, Kensaku Kawamoto, Wendy Kohlmann, Danielle L. Mowery, Richard L. Bradshaw, Subhadeep Deep, Wendy W. Chapman, Guilherme Del Fiol:
Extracting Disease Onset from Family History Comments in the Electronic Health Record using Fast Healthcare Interoperability Resources. AMIA 2019 - [c7]Jianlin Shi, Siru Liu, Liese C. Pruitt, Carolyn Luppens, Jeffrey P. Ferraro, Adi V. Gundlapalli, Wendy W. Chapman, Brian T. Bucher:
Using Natural Language Processing to improve EHR Structured Data-based Surgical Site Infection Surveillance. AMIA 2019 - [i2]Jianlin Shi, John F. Hurdle:
FastContext: an efficient and scalable implementation of the ConText algorithm. CoRR abs/1905.00079 (2019) - [i1]Jianlin Shi, Kevin Graves, John F. Hurdle:
A generic rule-based system for clinical trial patient selection. CoRR abs/1907.06860 (2019) - 2018
- [j2]Jianlin Shi, John F. Hurdle:
Trie-based rule processing for clinical NLP: A use-case study of n-trie, making the ConText algorithm more efficient and scalable. J. Biomed. Informatics 85: 106-113 (2018) - 2017
- [c6]Jianlin Shi, Danielle L. Mowery, Mingyuan Zhang, Jessica Sanders, Wendy W. Chapman, Lori Gawron:
Extracting Intrauterine Device Usage from Clinical Texts Using Natural Language Processing. ICHI 2017: 568-571 - 2016
- [j1]Liqin Wang, Bruce E. Bray, Jianlin Shi, Guilherme Del Fiol, Peter J. Haug:
A method for the development of disease-specific reference standards vocabularies from textual biomedical literature resources. Artif. Intell. Medicine 68: 47-57 (2016) - [c5]Jianlin Shi, Danielle L. Mowery, Kristina M. Doing-Harris, John F. Hurdle:
RuSH: a Rule-based Segmentation Tool Using Hashing for Extremely Accurate Sentence Segmentation of Clinical Text. AMIA 2016 - [c4]Jianlin Shi, Lance Pflieger:
PrecMed: A collaborative environment for precision medicine research and practice. AMIA 2016 - 2015
- [c3]Kristina Doing-Harris, Charlene R. Weir, Sean Igo, Jianlin Shi, YiJun Shao, John F. Hurdle:
POETenceph - Automatic identification of clinical notes indicating encephalopathy using a realist ontology. AMIA 2015 - [c2]Kristina Doing-Harris, Sean Igo, Jianlin Shi, John F. Hurdle:
UtahPOET: Disorder Mention Identification and Context Slot Filling with Cognitive Inspiration. SemEval@NAACL-HLT 2015: 399-405 - 2014
- [c1]Jon-David Ethington, Jianlin Shi, Scott D. Nelson:
Online Patient Center: Expanding Patient Portals by Integrating Patient-Generated Data Directly into a Primary Care Provider's EHR Workflow. AMIA 2014
Coauthor Index
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