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Jonathan Gryak
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2020 – today
- 2023
- [j20]Cristian Minoccheri, Olivia Alge
, Jonathan Gryak
, Kayvan Najarian, Harm Derksen:
Quadratic Multilinear Discriminant Analysis for Tensorial Data Classification. Algorithms 16(2): 104 (2023) - [j19]Heming Yao
, Harm Derksen, Jessica R. Golbus, Justin Zhang, Keith D. Aaronson
, Jonathan Gryak
, Kayvan Najarian
:
A Novel Tropical Geometry-Based Interpretable Machine Learning Method: Pilot Application to Delivery of Advanced Heart Failure Therapies. IEEE J. Biomed. Health Informatics 27(1): 239-250 (2023) - [i9]Jonathan Gryak, Kayvan Najarian, Harm Derksen:
Tensor Denoising via Amplification and Stable Rank Methods. CoRR abs/2301.03761 (2023) - 2022
- [j18]Zijun Gao, Lu Wang, Reza Soroushmehr, Alexander Wood, Jonathan Gryak
, Brahmajee K. Nallamothu, Kayvan Najarian:
Vessel segmentation for X-ray coronary angiography using ensemble methods with deep learning and filter-based features. BMC Medical Imaging 22(1): 10 (2022) - [j17]Negar Farzaneh
, Erica B. Stein, Reza Soroushmehr, Jonathan Gryak
, Kayvan Najarian:
A deep learning framework for automated detection and quantitative assessment of liver trauma. BMC Medical Imaging 22(1): 39 (2022) - [j16]Cristian Minoccheri, Craig A. Williamson, Mark Hemmila, Kevin Ward
, Erica B. Stein, Jonathan Gryak
, Kayvan Najarian:
An interpretable neural network for outcome prediction in traumatic brain injury. BMC Medical Informatics Decis. Mak. 22(1): 203 (2022) - [i8]Justin Zhang, Deborah Lee, Kylie Jungles, Diane Shaltis, Kayvan Najarian, Rajan Ravikumar, Georgiana Sanders, Jonathan Gryak:
Prediction of Oral Food Challenges via Machine Learning. CoRR abs/2208.08268 (2022) - 2021
- [j15]Larry Hernandez
, Renaid B. Kim
, Neriman Tokcan, Harm Derksen, Ben E. Biesterveld
, Alfred Croteau, Aaron M. Williams, Michael Mathis
, Kayvan Najarian, Jonathan Gryak
:
Multimodal tensor-based method for integrative and continuous patient monitoring during postoperative cardiac care. Artif. Intell. Medicine 113: 102032 (2021) - [j14]Zhi Li, Harm Derksen, Jonathan Gryak
, Cheng Jiang, Zijun Gao, Winston Zhang
, Hamid Ghanbari, Pujitha Gunaratne, Kayvan Najarian:
Prediction of cardiac arrhythmia using deterministic probabilistic finite-state automata. Biomed. Signal Process. Control. 63: 102200 (2021) - [j13]Narathip Reamaroon
, Michael W. Sjoding, Jonathan Gryak
, Brian D. Athey, Kayvan Najarian, Harm Derksen:
Automated detection of acute respiratory distress syndrome from chest X-Rays using Directionality Measure and deep learning features. Comput. Biol. Medicine 134: 104463 (2021) - [j12]Julie Wang
, Alexander Wood, Chao Gao, Kayvan Najarian, Jonathan Gryak
:
Automated Spleen Injury Detection Using 3D Active Contours and Machine Learning. Entropy 23(4): 382 (2021) - [j11]Heming Yao, Ryan W. Stidham, Zijun Gao, Jonathan Gryak
, Kayvan Najarian:
Motion-based camera localization system in colonoscopy videos. Medical Image Anal. 73: 102180 (2021) - [j10]Zhi Li, Kevin M. Wheelock, Sangeeta Lathkar-Pradhan, Hakan Oral, Daniel J. Clauw, Pujitha Gunaratne, Jonathan Gryak
, Kayvan Najarian, Brahmajee K. Nallamothu, Hamid Ghanbari:
Predicting atrial fibrillation episodes with rapid ventricular rates associated with low levels of activity. BMC Medical Informatics Decis. Mak. 21(1): 364 (2021) - [j9]Negar Farzaneh
, Craig A. Williamson, Jonathan Gryak
, Kayvan Najarian:
A hierarchical expert-guided machine learning framework for clinical decision support systems: an application to traumatic brain injury prognostication. npj Digit. Medicine 4 (2021) - [j8]Neriman Tokcan, Jonathan Gryak
, Kayvan Najarian, Harm Derksen:
Algebraic Methods for Tensor Data. SIAM J. Appl. Algebra Geom. 5(1): 1-27 (2021) - [j7]Elyas Sabeti
, Joshua Drews, Narathip Reamaroon
, Elisa Warner
, Michael W. Sjoding, Jonathan Gryak
, Kayvan Najarian
:
Learning Using Partially Available Privileged Information and Label Uncertainty: Application in Detection of Acute Respiratory Distress Syndrome. IEEE J. Biomed. Health Informatics 25(3): 784-796 (2021) - [c31]Winston Zhang, Jonas Bianchi
, Najla Al Turkestani
, Celia Le, Romain Deleat-Besson, Antonio C. Ruellas, Lucia H. S. Cevidanes, Marilia Yatabe, João Roberto Gonçalves, Erika Benavides, Fabiana Soki, Juan Prieto, Beatriz Paniagua, Kayvan Najarian, Jonathan Gryak
, Reza Soroushmehr:
Temporomandibular Joint Osteoarthritis Diagnosis Using Privileged Learning of Protein Markers. EMBC 2021: 1810-1813 - [c30]Romain Deleat-Besson, Celia Le, Najla Al Turkestani
, Winston Zhang, Maxime Dumont, Serge Brosset, Juan Carlos Prieto
, Lucia H. S. Cevidanes, Jonas Bianchi
, Antonio C. Ruellas, Marcela Gurgel
, Camila Massaro, Aron Aliaga Del Castillo, Marcos Ioshida, Marilia Yatabe, Erika Benavides, Hector Rios, Fabiana Soki, Gisele Neiva, Juan Fernando Aristizabal, Diego Rey, Maria Antonia Alvarez, Kayvan Najarian, Jonathan Gryak
, Martin Styner, Jean-Christophe Fillion-Robin, Beatriz Paniagua, Reza Soroushmehr:
Automatic Segmentation of Dental Root Canal and Merging with Crown Shape. EMBC 2021: 2948-2951 - [c29]Celia Le, Romain Deleat-Besson, Juan Carlos Prieto, Serge Brosset, Maxime Dumont, Winston Zhang, Lucia H. S. Cevidanes, Jonas Bianchi
, Antonio C. Ruellas, Liliane R. Gomes, Marcela Gurgel
, Camila Massaro, Aron Aliaga Del Castillo, Marilia Yatabe, Erika Benavides, Fabiana Soki, Najla Al Turkestani
, Karine Evangelista, João Roberto Gonçalves, Jose Valladares-Neto, Maria Alves Garcia Silva, Cauby Maia Chaves Junior, Fábio Costa, Daniela Gamba Garib, Heesoo Oh, Jonathan Gryak
, Martin Styner, Jean-Christophe Fillion-Robin, Beatriz Paniagua, Kayvan Najarian, Reza Soroushmehr:
Automatic Segmentation of Mandibular Ramus and Condyles. EMBC 2021: 2952-2955 - [c28]Serge Brosset, Maxime Dumont, Lucia H. S. Cevidanes, Reza Soroushmehr, Jonas Bianchi
, Marcela Lima Gurgel
, Romain Deleat-Besson, Celia Le, Antonio C. Ruellas, Marilia Yatabe, Liliane R. Gomes, João Roberto Gonçalves, Kayvan Najarian, Jonathan Gryak
, Beatriz Paniagua, Martin Styner, Juan Carlos Prieto:
Web infrastructure for data management, storage and computation. Medical Imaging: Biomedical Applications in Molecular, Structural, and Functional Imaging 2021 - [c27]Winston Zhang
, Najla Al Turkestani, Jonas Bianchi
, Celia Le, Romain Deleat-Besson, Antonio C. Ruellas, Lucia H. S. Cevidanes, Marilia Yatabe, João Roberto Gonçalves, Erika Benavides, Fabiana Soki, Juan Prieto, Beatriz Paniagua, Jonathan Gryak
, Kayvan Najarian, Reza Soroushmehr:
Feature Selection for Privileged Modalities in Disease Classification. ML-CDS@MICCAI 2021: 69-80 - [c26]Romain Deleat-Besson, Celia Le, Winston Zhang, Najla Al Turkestani
, Lucia H. S. Cevidanes, Jonas Bianchi
, Antonio C. Ruellas, Marcela Gurgel
, Camila Massaro, Aron Aliaga Del Castillo, Marcos Ioshida, Marilia Yatabe, Erika Benavides, Hector Rios, Fabiana Soki, Gisele Neiva, Kayvan Najarian, Jonathan Gryak
, Martin Styner, Juan Fernando Aristizabal, Diego Rey, Maria Antonia Alvarez, Loris Bert, Reza Soroushmehr, Juan Prieto:
Merging and Annotating Teeth and Roots from Automated Segmentation of Multimodal Images. ML-CDS@MICCAI 2021: 81-92 - [i7]Heming Yao, Harm Derksen, Jessica R. Golbus, Justin Zhang, Keith D. Aaronson, Jonathan Gryak, Kayvan Najarian:
A Novel Tropical Geometry-based Interpretable Machine Learning Method: Application in Prognosis of Advanced Heart Failure. CoRR abs/2112.05071 (2021) - 2020
- [j6]Heming Yao, Craig A. Williamson, Jonathan Gryak
, Kayvan Najarian:
Automated hematoma segmentation and outcome prediction for patients with traumatic brain injury. Artif. Intell. Medicine 107: 101910 (2020) - [j5]Narathip Reamaroon
, Michael W. Sjoding, Harm Derksen, Elyas Sabeti, Jonathan Gryak
, Ryan P. Barbaro
, Brian D. Athey, Kayvan Najarian:
Robust segmentation of lung in chest x-ray: applications in analysis of acute respiratory distress syndrome. BMC Medical Imaging 20(1): 116 (2020) - [j4]Renaid B. Kim, Jonathan Gryak
, Abinash Mishra, Can Cui, S. M. Reza Soroushmehr, Kayvan Najarian, James S. Wrobel:
Utilization of smartphone and tablet camera photographs to predict healing of diabetes-related foot ulcers. Comput. Biol. Medicine 126: 104042 (2020) - [j3]Jonathan Gryak
, Robert M. Haralick, Delaram Kahrobaei
:
Solving the Conjugacy Decision Problem via Machine Learning. Exp. Math. 29(1): 66-78 (2020) - [c25]Olivia Alge
, Lu Lu, Zhi Li, Yingqi Hua, Jonathan Gryak
, Kayvan Najarian:
Automated Classification of Osteosarcoma and Benign Tumors using RNA-seq and Plain X-ray. EMBC 2020: 1165-1168 - [c24]Serge Brosset, Maxime Dumont, Jonas Bianchi
, Antonio C. Ruellas, Lucia H. S. Cevidanes, Marilia Yatabe, João Roberto Gonçalves, Erika Benavides, Fabiana Soki, Beatriz Paniagua, Juan Prieto, Kayvan Najarian, Jonathan Gryak
, Reza Soroushmehr:
3D Auto-Segmentation of Mandibular Condyles. EMBC 2020: 1270-1273 - [c23]Olivia Alge
, S. M. Reza Soroushmehr, Jonathan Gryak
, Anna Kratz, Kayvan Najarian:
Predicting Poor Sleep Quality in Fibromyalgia with Wrist Sensors. EMBC 2020: 4290-4293 - [c22]Maxime Dumont, Juan-Carlos Prieto, Serge Brosset, Lucia H. S. Cevidanes, Jonas Bianchi
, Antonio C. Ruellas, Marcela Gurgel
, Camila Massaro, Aron Aliaga Del Castillo
, Marcos Ioshida, Marilia Yatabe, Erika Benavides, Hector Rios, Fabiana Soki, Gisele Neiva, Juan Fernando Aristizabal, Diego Rey, Maria Antonia Alvarez, Kayvan Najarian, Jonathan Gryak
, Martin Styner, Jean-Christophe Fillion-Robin, Beatriz Paniagua, Reza Soroushmehr:
Patient Specific Classification of Dental Root Canal and Crown Shape. ShapeMI@MICCAI 2020: 145-153 - [i6]Neriman Tokcan, Jonathan Gryak, Kayvan Najarian, Harm Derksen:
Algebraic Methods for Tensor Data. CoRR abs/2005.12988 (2020) - [i5]Heming Yao, Ryan W. Stidham, Jonathan Gryak, Kayvan Najarian:
Motion-based Camera Localization System in Colonoscopy Videos. CoRR abs/2012.01690 (2020)
2010 – 2019
- 2019
- [j2]Elyas Sabeti
, Jonathan Gryak
, Harm Derksen, Craig Biwer, Sardar Ansari, Howard Isenstein, Anna Kratz, Kayvan Najarian:
Learning Using Concave and Convex Kernels: Applications in Predicting Quality of Sleep and Level of Fatigue in Fibromyalgia. Entropy 21(5): 442 (2019) - [c21]Heming Yao, Keith D. Aaronson, Lu Lu, Jonathan Gryak
, Kayvan Najarian, Jessica R. Golbus
:
Using a Fuzzy Neural Network in Clinical Decision Support for Patients with Advanced Heart Failure. BIBM 2019: 995-999 - [c20]Cheng Jiang, Jie Cao
, Craig A. Williamson, Negar Farzaneh, Venkatakrishna Rajajee, Jonathan Gryak
, Kayvan Najarian, S. M. Reza Soroushmehr:
Midline Shift vs. Mid-Surface Shift: Correlation with Outcome of Traumatic Brain Injuries. BIBM 2019: 1083-1086 - [c19]Alexey Gribov, Kelsey Horan, Jonathan Gryak
, Kayvan Najarian, Vladimir Shpilrain, S. M. Reza Soroushmehr, Delaram Kahrobaei
:
Medical Diagnostics Based on Encrypted Medical Data. BICT 2019: 98-111 - [c18]Behzad Ghazanfari, Fatemeh Afghah, Kayvan Najarian, Sajad Mousavi, Jonathan Gryak
, James Todd:
An Unsupervised Feature Learning Approach to Reduce False Alarm Rate in ICUs. EMBC 2019: 349-353 - [c17]Can Cui, Karl Thurnhofer-Hemsi
, Reza Soroushmehr, Abinash Mishra, Jonathan Gryak
, Enrique Domínguez, Kayvan Najarian, Ezequiel López-Rubio
:
Diabetic Wound Segmentation using Convolutional Neural Networks. EMBC 2019: 1002-1005 - [c16]Zhi Li, Harm Derksen, Jonathan Gryak
, Mohsen Hooshmand, Alexander Wood, Hamid Ghanbari, Pujitha Gunaratne, Kayvan Najarian:
Markov Models for Detection of Ventricular Arrhythmia. EMBC 2019: 1488-1491 - [c15]Elyas Sabeti, Joshua Drews, Narathip Reamaroon, Jonathan Gryak
, Michael W. Sjoding, Kayvan Najarian:
Detection of Acute Respiratory Distress Syndrome by Incorporation of Label Uncertainty and Partially Available Privileged Information. EMBC 2019: 1717-1720 - [c14]Heming Yao, Ryan W. Stidham, Reza Soroushmehr, Jonathan Gryak
, Kayvan Najarian:
Automated Detection of Non-Informative Frames for Colonoscopy Through a Combination of Deep Learning and Feature Extraction. EMBC 2019: 2402-2406 - [c13]S. M. Reza Soroushmehr, Krishna Rajajee, Craig A. Williamson, Jonathan Gryak
, Kayvan Najarian, Kevin Ward
, Mohamad Hakam Tiba
:
Automated Optic Nerve Sheath Diameter Measurement Using Super-pixel Analysis. EMBC 2019: 2793-2796 - [c12]Heming Yao, Craig A. Williamson, Jonathan Gryak
, Kayvan Najarian:
Brain Hematoma Segmentation Using Active Learning and an Active Contour Model. IWBBIO (2) 2019: 385-396 - [i4]Behzad Ghazanfari, Fatemeh Afghah, Kayvan Najarian, Sajad Mousavi, Jonathan Gryak, James Todd:
An Unsupervised Feature Learning Approach to Reduce False Alarm Rate in ICUs. CoRR abs/1904.08495 (2019) - 2018
- [c11]Olivia Alge
, Jonathan Gryak
, Yingqi Hua, Kayvan Najarian:
Classifying Osteosarcoma Using Meta-Analysis of Gene Expression. BIBM 2018: 2400-2404 - [c10]Zhi Li, Harm Derksen, Jonathan Gryak
, Mohsen Hooshmand, Alexander Wood
, Hamid Ghanbari, Pujitha Gunaratne, Kayvan Najarian:
Supraventricular Tachycardia Detection via Machine Learning Algorithms. BIBM 2018: 2419-2422 - [c9]Alexander Wood
, S. M. Reza Soroushmehr, Negar Farzaneh, David Paul Fessell, Kevin R. Ward
, Jonathan Gryak
, Delaram Kahrobaei
, Kayvan Najarian:
Fully Automated Spleen Localization And Segmentation Using Machine Learning And 3D Active Contours. EMBC 2018: 53-56 - [c8]Mohsen Hooshmand, S. M. Reza Soroushmehr, Craig A. Williamson, Jonathan Gryak
, Kayvan Najarian:
Automatic Midline Shift Detection in Traumatic Brain Injury. EMBC 2018: 131-134 - [c7]An Nguyen
, Sardar Ansari, Mohsen Hooshmand, Kaiwen Lin
, Hamid Ghanbari, Jonathan Gryak
, Kayvan Najarian:
Comparative Study on Heart Rate Variability Analysis for Atrial Fibrillation Detection in Short Single-Lead ECG Recordings. EMBC 2018: 526-529 - [c6]Rebecca Shen, Zhi Li, Linglin Zhang, Yingqi Hua, Min Mao, Zhicong Li, Zhengdong Cai, Yunping Qiu, Jonathan Gryak
, Kayvan Najarian:
Osteosarcoma Patients Classification Using Plain X-Rays and Metabolomic Data. EMBC 2018: 690-693 - [c5]Heming Yao, Wei Zhang, Rajesh K. Malhan, Jonathan Gryak
, Kayvan Najarian:
Filter-Pruned 3D Convolutional Neural Network for Drowsiness Detection. EMBC 2018: 1258-1262 - [c4]Negar Farzaneh, S. M. Reza Soroushmehr, Hirenkumar Patel, Alexander Wood
, Jonathan Gryak
, David Paul Fessell, Kayvan Najarian:
Automated Kidney Segmentation for Traumatic Injured Patients through Ensemble Learning and Active Contour Modeling. EMBC 2018: 3418-3421 - [c3]Zhi Li, Harm Derksen, Jonathan Gryak
, Hamid Ghanbari, Pujitha Gunaratne, Kayvan Najarian:
A Novel Atrial Fibrillation Prediction Algorithm Applicable to Recordings from Portable Devices. EMBC 2018: 4034-4037 - [c2]Sardar Ansari, Jonathan Gryak
, Kayvan Najarian:
Noise Detection in Electrocardiography Signal for Robust Heart Rate Variability Analysis: A Deep Learning Approach. EMBC 2018: 5632-5635 - [c1]Heming Yao, Craig A. Williamson, S. M. Reza Soroushmehr, Jonathan Gryak
, Kayvan Najarian:
Hematoma Segmentation Using Dilated Convolutional Neural Network. EMBC 2018: 5902-5905 - 2017
- [b1]Jonathan Gryak:
Solving Algorithmic Problems in Finitely Presented Groups via Machine Learning. City University of New York, USA, 2017 - [i3]Jonathan Gryak, Robert M. Haralick, Delaram Kahrobaei:
Solving the Conjugacy Decision Problem via Machine Learning. CoRR abs/1705.10417 (2017) - 2016
- [j1]Jonathan Gryak
, Delaram Kahrobaei
:
The status of polycyclic group-based cryptography: A survey and open problems. Groups Complex. Cryptol. 8(2): 171-186 (2016) - [i2]Jonathan Gryak, Delaram Kahrobaei:
The Status of Polycyclic Group-Based Cryptography: A Survey and Open Problems. CoRR abs/1607.05819 (2016) - [i1]Jonathan Gryak, Delaram Kahrobaei, Conchita Martínez-Pérez:
On the Conjugacy Problem in Certain Metabelian Groups. CoRR abs/1610.06503 (2016)
Coauthor Index
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