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2020 – today
- 2023
[j3]Jennifer Mattock
, Marina Martínez-Álvaro, Matthew A Cleveland, Rainer Roehe, Mick Watson:
KOunt: a reproducible KEGG orthologue abundance workflow. Bioinform. 39(8) (2023)- 2020
- [j2]Huiru Zheng, Haiying Wang, Richard J. Dewhurst, Rainer Roehe:
Improving the Inference of Co-Occurrence Networks in the Bovine Rumen Microbiome. IEEE ACM Trans. Comput. Biol. Bioinform. 17(3): 858-867 (2020) - [c9]Mengyuan Wang, Haiying Wang, Huiru Zheng, Richard J. Dewhurst, Rainer Roehe:
A multilayer co-occurrence network reveals the systemic difference of diet-based rumen microbiome associated with methane yield phenotype. BIBM 2020: 2855-2860
2010 – 2019
- 2019
- [j1]Robert D. Stewart, Marc D. Auffret, Timothy J. Snelling, Rainer Roehe, Mick Watson:
MAGpy: a reproducible pipeline for the downstream analysis of metagenome-assembled genomes (MAGs). Bioinform. 35(12): 2150-2152 (2019) - [c8]Mengyuan Wang, Huiru Zheng, Haiying Wang, Richard J. Dewhurst, Rainer Roehe:
A knowledge driven mutual information-based analytical framework for the identification of rumen metabolites. BIBM 2019: 255-260 - [c7]Timmy Manning, Miguel Somarriba, Rainer Roehe, Simon Turner, Haiying Wang, Huiru Zheng, Brian Kelly, Jennifer Lynch, Paul Walsh:
Automated Object Tracking for Animal Behaviour Studies. BIBM 2019: 1876-1883 - [c6]Jyotsna Talreja Wassan, Huiru Zheng, Haiying Wang, Fiona Browne, Paul Walsh, Timmy Manning, Richard J. Dewhurst, Rainer Roehe:
A Phylogeny-aware Feature Ranking for Classification of Cattle Rumen Microbiome. BIBM 2019: 1900-1906 - 2018
- [c5]Jyotsna Talreja Wassan, Huiru Zheng, Fiona Browne, Jenna Bowen, Paul Walsh, Rainer Roehe, Richard J. Dewhurst, Cintia C. Palu, Brian Kelly, Haiying Wang:
An Integrative Framework for Functional Analysis of Cattle Rumen Microbiomes. BIBM 2018: 1854-1860 - 2017
- [c4]Haiying Wang, Huiru Zheng, Richard J. Dewhurst, Rainer Roehe:
Microbial co-presence and mutual-exclusion networks in the Bovine rumen microbiome. BIBM 2017: 114-119 - [c3]Jyotsna Talreja Wassan, Haiying Wang, Fiona Browne, Paul Walsh, Brian Kelly, Cintia C. Palu, Nina Konstantinidou, Rainer Roehe, Richard J. Dewhurst, Huiru Zheng:
An Integrative Approach for the Functional Analysis of Metagenomic Studies. ICIC (2) 2017: 421-427 - 2016
- [c2]Haiying Wang, Huiru Zheng, Fiona Browne, Rainer Roehe, Richard J. Dewhurst, Felix Engel, Matthias L. Hemmje, Paul Walsh:
Analysis of rumen microbial community in cattle through the integration of metagenomic and network-based approaches. BIBM 2016: 198-203 - [c1]Fiona Browne, Haiying Wang, Huiru Zheng, Rainer Roehe, Richard J. Dewhurst, Paul Walsh:
A network analysis of methane and feed conversion genes in the rumen microbial community. BIBM 2016: 1477-1484
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